Vertebrate Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of other vertebrates only.

See also: hub access, track statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser		 scientific name
and data download		 NCBI assembly sequence
count		genome size
nucleotides		 gap
count		unknown bases
(gap size sum)		masking
percent
1 Abingdon island giant tortoise (Lonesome George 2018) Chelonoidis abingdonii GCF_003597395.1_ASM359739v1 10,618 2,300,739,315 63,430 131,201,757 27.42
2 Abingdon island giant tortoise (Lonesome George 2025) Chelonoidis abingdonii GCF_003597395.2_CheloAbing_2.0 3,850 2,256,485,154 39,154 77,830,784 28.39
3 adder (hap1 2024) Vipera berus GCA_964194415.1_rVipBer3.hap1.1 479 1,695,017,208 1,057 211,400 50.49
4 adder (hap1.1 2024) Vipera berus GCF_964194415.1_rVipBer3.hap1.1 478 1,694,999,861 1,057 211,400 50.67
5 adder (hap2 2024) Vipera berus GCA_964194405.1_rVipBer3.hap2.1 348 1,476,666,783 908 181,443 48.46
6 Adriatic sturgeon (F7M8 2026) Acipenser naccarii GCA_055691255.1_fAciNac1.hap3 1,881 1,654,527,848 3,793 661,391 45.07
7 Adriatic sturgeon (F7M8 2026) Acipenser naccarii GCA_055691465.1_fAciNac1.hap4 3,438 1,842,435,060 4,779 798,064 44.77
8 Adriatic sturgeon (F7M8hap2 2026) Acipenser naccarii GCA_055691285.1_fAciNac1.hap2 2,370 1,736,926,170 3,327 615,492 45.33
9 Aegean wall lizard (hap1.1 2024) Podarcis erhardii GCF_964252035.1_rPodErh1.hap1.1 326 1,495,994,634 836 167,200 51.38
10 Aeolian wall lizard (La Canna islet alternate hap 2022) Podarcis raffonei GCA_027172095.1_rPodRaf1.alt 4,811 182,031,793 3 260 27.46
11 Aeolian wall lizard (La Canna islet primary hap 2022 refseq) Podarcis raffonei GCF_027172205.1_rPodRaf1.pri 27 1,513,131,503 30 23,116 38.30
12 African bullfrog (1538 2019) Pyxicephalus adspersus GCA_004786255.1_Pads_1.0 5,411 1,563,367,516 121,461 164,412,553 27.96
13 African bullfrog (2023) Pyxicephalus adspersus GCF_032062135.1_UCB_Pads_2.0 8,090 1,440,325,565 40,350 41,022,584 30.39
14 African clawed frog (2021) Xenopus laevis GCF_017654675.1_Xenopus_laevis_v10.1 55 2,742,469,346 667 1,674,718 43.70
15 alligator gar (hap1 2026) Atractosteus spatula GCA_055471065.1_fAtrSpa1.hap1 356 1,182,717,904 64 12,800 36.29
16 American alligator (2023 refseq) Alligator mississippiensis GCF_030867095.1_rAllMis1 195 2,346,795,873 161 16,453,847 42.90
17 American alligator (hap1 2026) Alligator mississippiensis GCA_057657785.1_rAllMis2.hap1 310 2,356,129,514 144 25,300 42.96
18 American alligator (hap2 2026) Alligator mississippiensis GCA_057657805.1_rAllMis2.hap2 136 2,340,261,515 139 24,600 43.15
19 American alligator (KSC_2009_1 2016) Alligator mississippiensis GCF_000281125.3_ASM28112v4 7,094 2,161,730,208 236,641 47,274,298 36.07
20 American bullfrog (2022-GZ 2024) Aquarana catesbeiana GCF_042186555.1_ASM4218655v1 263 6,377,637,193 4,773 2,385,503 58.62
21 American bullfrog (primary hap 2024) Aquarana catesbeiana GCA_037953035.1_aLitCat1_p1.0 4,071 6,623,830,220 0 0 72.25
22 American eel (EN2019 2024) Anguilla rostrata GCF_018555375.3_ASM1855537v3 967 976,090,453 985 94,525 27.48
23 Andalusian wall lizard (hap1.1 2025) Podarcis vaucheri GCF_965113315.1_rPodVau1.hap1.1 285 1,614,928,384 949 189,800 54.14
24 angelshark (IRGN 9GIWDBWNYT 2023) Squatina squatina GCA_031763465.1_ASM3176346v1 1,152,659 1,516,571,770 226,036 207,513,064 32.10
25 Arctic lamprey (IMCB_JLM_01 2021) Lethenteron camtschaticum GCA_018977245.1_IMCB_Ljap_1.0 3,553 1,074,727,531 578,345 659,778 61.04
26 Asian vine snake (Xishuangbanna 2023) Ahaetulla prasina GCF_028640845.1_ASM2864084v1 748 1,772,420,080 331 33,100 48.91
27 Asiatic toad (SCDJY-AF-19 2020) Bufo gargarizans GCF_014858855.1_ASM1485885v1 748 4,545,482,719 3,874 81,454,369 58.76
28 Atlantic hagfish (alternate hap 2024) Myxine glutinosa GCA_964187825.1_kmMyxGlut1.1_alternate_haplotype 24,876 2,754,027,477 2 34 72.31
29 Atlantic hagfish (MG_SS 2024) Myxine glutinosa GCF_040869285.1_UKY_Mglu_1.0 4,270 3,829,277,745 4,876 2,253,344 75.19
30 Atlantic hagfish (primary hap 2024) Myxine glutinosa GCA_964187855.1_kmMyxGlut1.1 4,004 3,057,523,704 4,412 882,096 74.33
31 Atlantic ridley (rLepKem1 hap1 2025) Lepidochelys kempii GCA_965140285.1_rLepKem1.hap1 54 2,219,022,919 219 42,700 34.46
32 Atlantic ridley (rLepKem1 hap2 2025 refseq) Lepidochelys kempii GCF_965140265.1_rLepKem1.hap2 88 2,204,769,334 245 47,100 34.28
33 Atlantic stingray (hap1 2023 refseq) Hypanus sabinus GCF_030144855.1_sHypSab1.hap1 2,989 4,044,869,043 1,648 329,600 51.80
34 Atlantic stingray (hap2 2023) Hypanus sabinus GCA_030144785.1_sHypSab1.hap2 1,412 3,635,158,545 1,633 326,600 50.34
35 Australian saltwater crocodile Crocodylus porosus GCF_001723895.1_CroPor_comp1 70 2,049,536,252 97,039 108,664,899 34.94
36 axolotl (DD151 2021) Ambystoma mexicanum GCA_002915635.3_AmbMex60DD 27,157 28,206,905,576 184,422 3,685,753 68.20
37 axolotl (Mex_15411 2024 refseq) Ambystoma mexicanum GCF_040938575.1_UKY_AmexF1_1 221 29,117,864,639 2,095 417,300 67.13
38 barred grass snake (hap1.1 2024) Natrix helvetica GCF_964273705.1_rNatHel1.hap1.1 487 1,777,516,490 2,010 402,000 53.42
39 basking shark (hap1.1 2024) Cetorhinus maximus GCF_964194155.1_sCetMax3.hap1.1 5,087 3,993,849,873 2,778 555,635 66.00
40 basking shark (sCetMax3.hap1.1 2024) Cetorhinus maximus GCA_964194155.1_sCetMax3.hap1.1 5,088 3,993,866,540 2,778 555,635 65.99
41 basking shark (sCetMax3.hap2.1 2024) Cetorhinus maximus GCA_964194165.1_sCetMax3.hap2.1 3,829 3,817,333,378 2,740 548,000 67.08
42 Bellinger river turtle (v2 BRST_UC0152H_USYD 2025) Myuchelys georgesi GCA_040894355.2_rMyuGeo1.pri 109 1,980,039,302 77 15,400 26.49
43 beluga (Lower Danube River Hh-F2 2024) Huso huso GCA_036884735.1_HHUS_1.1 1,383 1,942,381,910 3,967 1,980,873 41.06
44 big-headed turtle (DO16091913 2018) Platysternon megacephalum GCA_003942145.1_ASM394214v1 359,693 2,319,087,892 109,876 36,533,996 44.01
45 Blainville's horned lizard (alternate hap 2022) Phrynosoma blainvillii GCA_026167975.1_rPhrBla1.0.hap2 52 1,968,358,621 64 6,400 40.57
46 Blainville's horned lizard (primary hap 2022) Phrynosoma blainvillii GCA_026167985.1_rPhrBla1.0.hap1 78 2,210,317,752 73 7,300 40.92
47 blonde ray (alternate hap 2023) Raja brachyura GCA_963513955.1_sRajBra1.1_alternate_haplotype 10,683 2,597,179,146 0 0 69.72
48 blonde ray (primary hap 2023) Raja brachyura GCA_963514005.1_sRajBra1.1 1,647 2,700,467,673 2,269 453,800 66.30
49 blonde ray (primary hap 2023) Raja brachyura GCF_963514005.1_sRajBra1.1 1,646 2,700,450,552 2,269 453,800 70.23
50 Bocage's wall lizard (hap1.1 2024) Podarcis bocagei GCF_964188305.1_rPodBoc1.hap1.1 507 1,615,206,822 1,005 201,015 54.56
51 brilliant-thighed poison frog (Ecuador 8001 2023) Allobates femoralis GCA_033576535.1_ASM3357653v1 6,646 5,324,439,307 21,710 2,160,982 54.99
52 brown anole (Geneva1000 2022 refseq) Anolis sagrei ordinatus GCF_025583915.1_AnoSag2.1 3,738 1,926,425,113 114,440 31,587,590 45.00
53 brown anole (maternal hap 2024 genbank) Anolis sagrei GCA_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
54 brown anole (maternal hap 2024 refseq) Anolis sagrei GCF_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
55 brown anole (rAnoSag1 2024) Anolis sagrei GCA_037176775.1_rAnoSag1.pat 41 1,727,284,250 172 34,400 44.79
56 brown hagfish (PATA_SCHIZ_1 2024) Eptatretus atami GCA_035128595.1_Eptata_v1 6,307 2,517,612,418 706,165 137,495,905 47.47
57 brown house snake (FMNH 251328 2023) Boaedon fuliginosus GCA_027560395.1_ASM2756039v1 583,668 1,404,044,445 169,987 25,801,168 34.95
58 brown spotted pit viper Protobothrops mucrosquamatus GCF_001527695.2_P.Mucros_1.0 52,280 1,673,876,332 115,571 131,596,805 35.18
59 brownbanded bambooshark (Juve2018m 2025) Chiloscyllium punctatum GCF_047496795.1_sChiPun1.3 1,989 5,274,411,202 2,891 288,992 54.06
60 Burmese python Python bivittatus GCF_000186305.1_Python_molurus_bivittatus-5.0.2 39,113 1,435,052,152 235,132 50,501,725 25.32
61 California glossy snake (A.elegans occidentalis HBS 135684 alternate hap 2022) Arizona elegans GCA_022578425.1_rAriEle1.0.a 54,869 2,206,698,359 5,955 595,511 46.05
62 California glossy snake (A.elegans occidentalis HBS 135684 primary hap 2022) Arizona elegans GCA_022577455.1_rAriEle1.0.p 140 1,842,551,953 256 25,618 46.73
63 Cape dwarf chameleon (Western Cape Province JTBG20231 hap1 2025) Bradypodion pumilum GCA_047715975.2_rBraPum1.hap1 73 2,467,904,324 109 21,800 56.48
64 Cape dwarf chameleon (Western Cape Province JTBG20231 hap2 2025) Bradypodion pumilum GCA_047715955.2_rBraPum1.hap2 82 2,479,053,460 120 24,000 56.66
65 Caribbean electric ray (hap1 2024 refseq) Narcine bancroftii GCF_036971445.1_sNarBan1.hap1 595 3,328,432,768 1,443 277,765 54.80
66 Caribbean electric ray (hap2 2024) Narcine bancroftii GCA_036971175.1_sNarBan1.hap2 445 3,110,263,114 1,507 286,941 52.51
67 Catalonian wall lizard (hap1.1 2025) Podarcis liolepis GCF_965112155.1_rPodLio1.hap1.1 290 1,574,020,868 921 184,200 52.94
68 central bearded dragon (2017) Pogona vitticeps GCF_900067755.1_pvi1.1 13,749 1,716,675,060 90,546 68,427,839 29.79
69 central bearded dragon (2025) Pogona vitticeps GCF_047335585.1_Pvi2.1 16 1,793,327,715 26 2,798 35.93
70 central bearded dragon (Pit_001003342236 2025) Pogona vitticeps GCA_051106095.1_PviZW2.1 90 1,752,831,155 26 2,600 34.91
71 central bearded dragon (Pit_001003342236 2025) Pogona vitticeps GCF_051106095.1_PviZW2.1 90 1,752,831,175 26 2,600 44.41
72 Chinese alligator Alligator sinensis GCF_000455745.1_ASM45574v1 9,317 2,270,567,745 167,965 71,965,296 37.54
73 Chinese crocodile lizard (Guangxi GXDGS128 2021) Shinisaurus crocodilurus GCA_021292165.1_IOZ_Scro_1.0 1,553 2,189,995,079 852 85,200 43.23
74 Chinese soft-shelled turtle (Daiwa-1 2012) Pelodiscus sinensis GCF_000230535.1_PelSin_1.0 19,904 2,202,483,752 185,476 95,844,368 32.34
75 Chinese soft-shelled turtle (JC-2024 2025) Pelodiscus sinensis GCF_049634645.1_ASM4963464v1 276 2,243,887,989 57 4,710 36.99
76 cloudy catshark (Kashiwa2021f 2025) Scyliorhinus torazame GCF_047496885.1_sScyTor2.1 2,007 6,451,259,511 4,654 465,342 67.49
77 coelacanth Latimeria chalumnae GCF_000225785.1_LatCha1 22,819 2,860,591,921 269,010 676,999,153 34.87
78 coelacanth (alternate hap 2024) Latimeria chalumnae GCA_037215105.1_fLatCha1.alt 34,011 1,353,940,091 1 32 65.15
79 coelacanth (fLatCha1 primary hap 2024) Latimeria chalumnae GCF_037176945.1_fLatCha1.pri 197 2,947,609,019 154 30,632 54.45
80 coelacanth (primary hap 2024) Latimeria chalumnae GCA_037176945.1_fLatCha1.pri 198 2,947,625,464 154 30,632 65.92
81 Columbretes wall lizard (hap1.1 2025) Podarcis liolepis GCA_965112155.1_rPodLio1.hap1.1 290 1,574,020,868 921 184,200 40.01
82 Columbretes wall lizard (hap2.1 2025) Podarcis liolepis GCA_965178375.1_rPodLio1.hap2.1 144 1,478,082,625 867 173,400 39.29
83 common blue-tongued skink (hap1 2024) Tiliqua scincoides GCA_035046495.1_rTilSci1.hap1 827 1,694,434,935 286 57,200 37.75
84 common blue-tongued skink (hap2 2024) Tiliqua scincoides GCA_035046505.1_rTilSci1.hap2 350 1,623,332,312 372 74,400 37.07
85 common eastern froglet (primary hap 2026) Crinia signifera GCF_055691185.1_ASM5569118v1 872 3,234,790,400 1,804 360,800 49.81
86 common frog (alternate hap 2021) Rana temporaria GCA_905171725.1_aRanTem1.1_alternate_haplotype 12,019 3,686,210,129 14 85,788 55.47
87 common garter snake Thamnophis sirtalis GCF_001077635.1_Thamnophis_sirtalis-6.0 7,930 1,424,897,867 246,220 302,274,245 27.09
88 common lizard (primary hap 2023) Zootoca vivipara GCA_963506605.1_rZooViv1.1 49 1,440,256,436 683 136,600 45.68
89 common lizard Z.vivipara (hap1.1 2025) Zootoca vivipara GCA_965207765.1_rZooViv2.hap1.1 61 1,424,530,687 108 21,600 37.28
90 common lizard Z.vivipara (hap2.1 2025) Zootoca vivipara GCA_965208345.1_rZooViv2.hap2.1 67 1,423,701,498 102 20,400 37.19
91 common lizard Z.vivipara (primary hap 2023) Zootoca vivipara GCF_963506605.1_rZooViv1.1 48 1,440,239,386 683 136,600 45.64
92 common newt (alternate hap 2024) Lissotriton vulgaris GCA_964261385.1_aLisVul1.1_alternate_haplotype 191,289 20,825,842,797 62 12,225 47.87
93 common newt (primary hap 2024) Lissotriton vulgaris GCA_964263255.1_aLisVul1.1 15,265 24,226,223,864 4,030 805,825 63.80
94 common spadefoot toad (primary hap 2024 genbank) Pelobates fuscus GCA_036172605.1_aPelFus1.pri 160 3,606,474,367 349 69,626 51.45
95 common spadefoot toad (primary hap 2024 refseq) Pelobates fuscus GCF_036172605.1_aPelFus1.pri 159 3,606,456,729 349 69,626 51.45
96 common toad (alternate hap 2021) Bufo bufo GCA_905171715.1_aBufBuf1.1_alternate_haplotype 24,195 3,744,894,388 156 491,279 61.49
97 common toad (primary hap 2021) Bufo bufo GCF_905171765.1_aBufBuf1.1 1,306 5,044,744,194 4,199 9,878,258 62.71
98 common wall lizard (hap1 2024 genbank) Podarcis muralis GCA_964188315.1_rPodMur119.hap1.1 185 1,522,641,370 827 165,400 38.70
99 common wall lizard (hap1 2024 refseq) Podarcis muralis GCF_964188315.1_rPodMur119.hap1.1 185 1,522,641,503 827 165,400 49.96
100 common wall lizard (hap2 2024) Podarcis muralis GCA_964188365.1_rPodMur119.hap2.1 91 1,433,931,530 734 146,800 37.85
101 common wall lizard (yellow 2019) Podarcis muralis GCF_004329235.1_PodMur_1.0 2,161 1,511,020,169 4,085 2,917,502 36.17
102 corn snake (Columbia U 2023) Pantherophis guttatus GCF_029531705.1_CU_Pguttatus_1 466 1,708,105,946 3,553 58,150,805 48.06
103 corn snake (EG266 2020) Pantherophis guttatus GCF_001185365.1_UNIGE_PanGut_3.0 34,268 1,706,961,544 84,947 80,217,334 40.33
104 corroboree frog (hap1 2023) Pseudophryne corroboree GCA_028390055.1_aPseCor3.hap1 3,527 8,945,609,516 2,431 17,791,795 76.17
105 corroboree frog (hap2 2023 refseq) Pseudophryne corroboree GCF_028390025.1_aPseCor3.hap2 3,127 8,872,758,793 2,699 21,212,457 74.73
106 Couch's spadefoot toad (hap1 2026) Scaphiopus couchii GCA_054954225.1_aScaCou1.hap1 578 1,026,710,281 605 13,159,307 34.49
107 Couch's spadefoot toad (hap2 2026) Scaphiopus couchii GCA_054954145.1_aScaCou1.hap2 494 1,065,624,064 620 8,210,273 36.92
108 crested gecko (US Hobby MAA-2024a 2024) Correlophus ciliatus GCA_040207535.1_USC_Ccil_1.0 151 1,652,967,480 11 1,100 34.92
109 Cretan wall lizard (alternate hap 2023) Podarcis cretensis GCA_951804955.1_rPodCre2.1_alternate_haplotype 1,936 1,372,769,884 0 0 38.04
110 Cretan wall lizard (primary hap 2023) Podarcis cretensis GCA_951804945.1_rPodCre2.1 51 1,507,627,055 47 9,400 38.66
111 Cretan wall lizard (primary hap 2023) Podarcis cretensis GCF_951804945.1_rPodCre2.1 51 1,507,627,055 47 9,400 46.28
112 cuckoo ray (2025) Leucoraja naevus GCA_965643135.1_sLeuNae2.1 1,503 2,368,913,580 2,173 228,200 67.27
113 Dalmatian wall lizard (hap1.1 2024) Podarcis melisellensis GCF_964234715.1_rPodMel1.hap1.1 386 1,574,923,724 823 164,600 53.07
114 Darwin's frog (hap1 2025) Rhinoderma darwinii GCF_050947455.1_aRhiDar2.hap1 2,942 3,657,511,227 1,606 312,300 63.44
115 Darwin's frog (hap2 2025) Rhinoderma darwinii GCA_050947465.1_aRhiDar2.hap2 1,374 3,445,176,806 1,648 315,200 62.18
116 diablito poison frog (Paru LO004 2023) Oophaga sylvatica GCA_033576555.1_ASM3357655v1 15,283 5,186,611,867 56,659 5,665,461 69.90
117 diamondback terrapin (hap1 2023 refseq) Malaclemys terrapin pileata GCF_027887155.1_rMalTer1.hap1 76 2,211,221,380 141 1,749,567 46.30
118 diamondback terrapin (hap2 rMalTer1 2023) Malaclemys terrapin pileata GCA_027887205.1_rMalTer1.hap2 59 2,212,837,039 127 498,579 46.36
119 dyeing poison frog (UK_male_01 2024 genbank) Dendrobates tinctorius GCA_039654945.1_ASM3965494v1 830 6,355,763,190 0 0 70.59
120 dyeing poison frog (UK_male_01 2024 refseq) Dendrobates tinctorius GCF_039654945.1_ASM3965494v1 830 6,355,763,190 0 0 70.59
121 eastern brown snake Pseudonaja textilis GCF_900518735.1_EBS10Xv2-PRI 28,550 1,590,035,073 59,472 39,286,110 39.63
122 eastern musk turtle (MuskTurtle02 alternate hap 2026) Sternotherus odoratus GCA_032164215.2_rSteOdo2_a1.1 216 1,759,329,236 553 110,600 41.84
123 Eastern musk turtle (MuskTurtle02 primary hap 2026) Sternotherus odoratus GCA_032164245.2_rSteOdo2_p1.1 74 1,745,493,323 1,079 212,400 40.91
124 eastern musk turtle (primary hap 2023) Sternotherus odoratus GCA_032164245.1_rSteOdo2_p1.0 218 1,759,411,633 553 110,600 30.45
125 eastern narrow-mouthed toad (hap2 2023) Gastrophryne carolinensis GCA_027917415.1_aGasCar1.hap2 590 4,305,890,454 1,773 354,600 60.57
126 eastern narrow-mouthed toad (primary haplotype 2023) Gastrophryne carolinensis GCA_027917425.1_aGasCar1.pri 1,002 4,336,248,441 1,745 349,000 60.57
127 elephant shark (2021) Callorhinchus milii GCF_018977255.1_IMCB_Cmil_1.0 1,762 991,535,955 14,404 67,999 37.93
128 elongated tortoise (hap1 2025) Indotestudo elongata GCA_050000095.2_rIndElo1.hap1 207 2,319,585,464 169 32,100 53.78
129 elongated tortoise (hap2 2025) Indotestudo elongata GCA_050000115.1_rIndElo1.hap2 586 2,343,166,286 171 31,400 53.40
130 Emei moustache toad (SX-2025 2025) Leptobrachium boringii GCA_054131545.1_ASM5413154v1 13 3,372,468,942 1,479 147,900 76.24
131 epaulette shark (alternate hap sHemOce1 2021) Hemiscyllium ocellatum GCA_020745765.1_sHemOce1.mat.decon 4,000 4,149,461,884 3,552 83,364,248 44.34
132 epaulette shark (primary hap 2021 refseq) Hemiscyllium ocellatum GCF_020745735.1_sHemOce1.pat.X.cur. 1,962 3,983,466,396 3,716 77,564,682 62.70
133 European brook lamprey (2025) Lampetra planeri GCF_965212315.1_kcLamPlan1.2.h2 2,193 960,362,263 873 174,482 61.94
134 European common frog (2021) Rana temporaria GCF_905171775.1_aRanTem1.1 554 4,111,422,596 1,860 26,194,034 55.46
135 European conger (alternate hap 2023) Conger conger GCA_963514125.1_fConCon1.1_alternate_haplotype 3,769 1,078,186,129 0 0 36.42
136 European eel (alternate hap 2020) Anguilla anguilla GCA_013347865.1_fAngAng1.alt 2,338 965,248,483 0 0 27.36
137 European eel (primary hap 2020 refseq) Anguilla anguilla GCF_013347855.1_fAngAng1.pri 54 979,045,926 640 3,868,499 27.45
138 European leaf-toed gecko (hap1 2023) Euleptes europaea GCF_029931775.1_rEulEur1.hap1 591 1,781,916,107 153 4,045,040 39.82
139 European leaf-toed gecko (hap2 2023) Euleptes europaea GCA_029931755.1_rEulEur1.hap2 381 1,775,520,415 177 5,646,691 39.56
140 European pond turtle (hap1 2023 genbank) Emys orbicularis GCA_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
141 European pond turtle (hap1 2023 refseq) Emys orbicularis GCF_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
142 European pond turtle (hap2 rEmyOrb1 2023) Emys orbicularis GCA_028017845.1_rEmyOrb1.hap2 156 2,327,425,914 130 5,287,839 35.51
143 European river lamprey (alternate hap 2024) Lampetra fluviatilis GCA_964198585.1_kcLamFluv1.1_alternate_haplotype 5,717 939,632,249 9 1,800 65.06
144 European river lamprey (primary hap 2024) Lampetra fluviatilis GCA_964198595.1_kcLamFluv1.1 1,497 1,042,475,189 1,795 359,000 50.86
145 European river lamprey (primary hap 2024) Lampetra fluviatilis GCF_964198595.1_kcLamFluv1.1 1,496 1,042,458,987 1,795 359,000 66.24
146 Far Eastern brook lamprey (v1 LAM-NWPU_2019-01 2020) Lethenteron reissneri GCF_015708825.1_ASM1570882v1 1,946 1,063,028,601 3,287 10,736,065 47.92
147 Far Eastern brook lamprey (v2 LAM-NWPU_2019-01 2020) Lethenteron reissneri GCF_015708825.2_ASM1570882v1 1,945 1,063,012,140 3,287 10,736,065 61.48
148 fence lizard Sceloporus undulatus GCF_019175285.1_SceUnd_v1.1 45,012 1,905,484,175 48,138 47,138,997 34.39
149 Filfola wall lizard (hap1.1 2024) Podarcis filfolensis GCF_964270895.1_rPodFil1.hap1.1 349 1,506,966,124 872 174,400 50.71
150 Filfola wall lizard (rPodFil1.hap1.1 2024) Podarcis filfolensis GCA_964270895.1_rPodFil1.hap1.1 349 1,506,966,124 872 174,400 37.95
151 Filfola wall lizard (rPodFil1.hap2.1 2024) Podarcis filfolensis GCA_964270875.1_rPodFil1.hap2.1 142 1,404,018,672 795 159,030 36.85
152 fire-bellied toad (alternate hap 2023) Bombina bombina GCA_027579415.1_aBomBom1.alt 13,751 1,936,746,371 0 0 57.30
153 fire-bellied toad (primary hap 2023 refseq) Bombina bombina GCF_027579735.1_aBomBom1.pri 2,467 10,019,663,791 7,009 198,898,177 69.42
154 flatback sea turtle (hap1 2025 refseq) Natator depressus GCF_965152275.1_rNatDep2.hap1 40 2,173,430,419 171 30,501 32.96
155 flatback sea turtle (hap2 2025) Natator depressus GCA_965152195.1_rNatDep2.hap2 61 2,130,756,730 261 44,502 43.66
156 Fleay's barred frog (hap1 2024 genbank) Mixophyes fleayi GCA_038048845.1_aMixFle1.hap1 2,806 2,969,628,263 1,421 3,802,133 46.39
157 Fleay's barred frog (hap1 2024 refseq) Mixophyes fleayi GCF_038048845.1_aMixFle1.hap1 2,806 2,969,628,263 1,421 3,802,133 46.39
158 Fleay's barred frog (hap2 2024) Mixophyes fleayi GCA_038048865.1_aMixFle1.hap2 914 2,876,209,288 1,383 3,308,527 44.69
159 Florida worm lizard (hap1 rRhiFlo1 2023) Rhineura floridana GCA_030035715.1_rRhiFlo1.hap1 623 2,321,796,813 213 3,744,152 45.22
160 Florida worm lizard (hap2 2023 genbank) Rhineura floridana GCA_030035675.1_rRhiFlo1.hap2 77 2,307,436,586 242 6,466,284 45.32
161 Florida worm lizard (hap2 2023 refseq) Rhineura floridana GCF_030035675.1_rRhiFlo1.hap2 76 2,307,419,594 242 6,466,284 45.32
162 frog A.baeobatrachus (hap1 2025 genbank) Anomaloglossus baeobatrachus GCA_048569485.1_aAnoBae1.hap1 3,642 6,265,077,250 3,772 740,432 69.97
163 frog A.baeobatrachus (hap1 2025 refseq) Anomaloglossus baeobatrachus GCF_048569485.1_aAnoBae1.hap1 3,643 6,265,094,822 3,773 740,433 69.97
164 frog A.baeobatrachus (hap2 2025) Anomaloglossus baeobatrachus GCA_048569465.1_aAnoBae1.hap2 2,426 6,129,031,283 3,799 743,629 69.31
165 Gaboon caecilian (alternate hap 2019) Geotrypetes seraphini GCA_902459495.1_aGeoSer1.1_alternate_haplotype 9,650 3,271,590,920 1 30 52.45
166 Gaboon caecilian (primary hap 2021) Geotrypetes seraphini GCF_902459505.2_aGeoSer1.2 163 3,779,413,726 433 5,502,713 74.48
167 Gaboon caecilian (v1.2 2021 genbank) Geotrypetes seraphini GCA_902459505.2_aGeoSer1.2 164 3,779,430,017 433 5,502,713 52.86
168 gharial (Ggan-Ray 2016) Gavialis gangeticus GCF_001723915.1_GavGan_comp1 81 2,640,792,433 248,526 698,155,287 27.15
169 gharial (hap1 2023) Gavialis gangeticus GCA_030020385.1_rGavGan2.hap1 298 2,339,480,201 61 1,123,919 33.04
170 gharial (hap2 2023) Gavialis gangeticus GCA_030020295.1_rGavGan2.hap2 160 2,328,538,659 118 1,108,111 32.92
171 giant manta (hap1 2023 refseq) Mobula birostris GCF_030028105.1_sMobBir1.hap1 4,715 4,014,635,230 1,810 30,852,630 54.43
172 giant manta (hap2 2023) Mobula birostris GCA_030035685.1_sMobBir1.hap2 1,558 3,634,101,053 1,742 54,983,815 51.68
173 giant South American river turtle (hap1 2024) Podocnemis expansa GCA_045364785.1_rPodExp1_haplotype_1 2,039 2,642,177,504 260 52,000 35.53
174 giant South American river turtle (hap2 2024) Podocnemis expansa GCA_045364815.1_rPodExp1_haplotype_2 725 2,565,358,608 224 44,800 33.86
175 Gila monster (Gila_16-S 2026) Heloderma suspectum GCF_057233095.1_16-S_ref 19 2,499,252,685 1 100 49.91
176 golden mantella (hap1 2025) Mantella aurantiaca GCA_048565345.1_aManAur1.hap1 3,088 3,336,112,499 4,138 827,249 53.24
177 golden mantella (hap2 2025) Mantella aurantiaca GCA_048565335.1_aManAur1.hap2 2,611 3,319,283,846 3,921 784,025 53.37
178 golden poison dart frog (yellow primary hap 2024) Phyllobates terribilis GCF_046119375.1_ASM4611937v1 9,343 10,565,307,257 1,234 123,034 81.78
179 goldspotted eel (2025) Myrichthys ocellatus GCA_975146105.1_fMyrOce1.1 38 1,515,218,214 147 15,100 39.54
180 Goodes thornscrub tortoise (Sinaloan 2019) Gopherus evgoodei GCF_007399415.2_rGopEvg1_v1.p 383 2,298,564,209 562 29,560,319 33.37
181 Goodes thornscrub tortoise (Sinaloan alternate hap 2019) Gopherus evgoodei GCA_007399395.1_rGopEvg1_v1.alt 8,736 1,961,129,424 0 0 33.34
182 Goodes thornscrub tortoise (Sinaloan lineage primary hap 2019) Gopherus evgoodei GCA_007399415.1_rGopEvg1_v1.p 383 2,298,564,209 562 29,560,319 33.37
183 gopher snake (HBS135680 alternate hap 2023 refseq) Pituophis catenifer annectens GCF_029215685.1_rPitCat1.0.hap2 649 1,682,881,129 584 58,400 45.94
184 gopher snake (HBS135680 primary hap 2023) Pituophis catenifer annectens GCA_029215655.1_rPitCat1.0.hap1 426 1,749,255,673 603 60,300 45.41
185 graceful crag lizard (Gifberg primary hap 2022) Hemicordylus capensis GCF_027244095.1_rHemCap1.1.pri 44 2,294,751,221 42 8,400 41.45
186 Grand Cayman blue iguana (hap1 2023) Cyclura pinguis GCA_030412105.1_rCycPin1.hap1 30 1,983,631,412 28 1,082,164 32.57
187 Grand Cayman blue iguana (hap2 2023) Cyclura pinguis GCA_030412085.1_rCycPin1.hap2 33 1,955,392,031 19 19,385,908 32.31
188 gray bichir Polypterus senegalus GCF_016835505.1_ASM1683550v1 9,856 3,673,880,163 3,166 1,583,000 47.67
189 great white shark (alternate hap 2021) Carcharodon carcharias GCA_017639455.1_sCarCar2.alt 39 6,205,005 28 1,535 60.53
190 great white shark (primary hap 2021) Carcharodon carcharias GCA_017639515.1_sCarCar2.pri 719 4,286,311,192 2,645 19,150,268 64.19
191 great white shark (primary hap 2021) Carcharodon carcharias GCF_017639515.1_sCarCar2.pri 719 4,286,311,191 2,645 19,150,268 52.46
192 green anole (JA03-04 2024) Anolis carolinensis GCF_035594765.1_rAnoCar3.1.pri 211 1,850,740,401 841 30,006,477 52.33
193 green anole (v1 2011) Anolis carolinensis GCF_000090745.1_AnoCar2.0 6,457 1,799,143,587 35,533 97,789,820 39.70
194 green anole (v2 2010) Anolis carolinensis GCF_000090745.2_AnoCar2.0 6,456 1,799,126,364 35,530 97,789,817 48.60
195 green sea turtle (primary hap 2021) Chelonia mydas GCA_015237465.2_rCheMyd1.pri.v2 92 2,134,358,617 298 11,960,176 44.47
196 green sea turtle (v2 alternate hap 2021) Chelonia mydas GCA_015220195.2_rCheMyd1.alt.v2 6,737 1,896,142,417 60 854,042 44.96
197 green sea turtle (v2 primary hap 2021) Chelonia mydas GCF_015237465.2_rCheMyd1.pri.v2 93 2,134,375,114 298 11,960,176 31.96
198 Greenland sleeper shark (2025) Somniosus microcephalus GCF_052327205.1_FLI_Smic_1.0 2,111 6,448,606,148 11,933 5,965,161 75.61
199 Greenland sleeper shark (GS21.2 2025) Somniosus microcephalus GCA_052327205.1_FLI_Smic_1.0 2,112 6,448,622,878 11,933 5,965,161 75.60
200 grey reef shark (2025) Carcharhinus amblyrhynchos GCA_965295155.1_sCarAmb.v2.hapB 1,534 2,927,843,764 876 87,600 59.12
201 grey reef shark (2025) Carcharhinus amblyrhynchos GCF_965287045.1_sCarAmb.v2.hapA 1,521 2,923,578,137 883 88,300 59.06
202 hawksbill sea turtle (B2_1 2023) Eretmochelys imbricata GCA_030012505.1_ASM3001250v1 208 2,296,226,205 95 45,071 43.96
203 hawksbill sea turtle (hap1 2025 genbank) Eretmochelys imbricata GCA_965152235.1_rEreImb1.hap1 57 2,218,003,986 131 2,771,483 33.65
204 hawksbill sea turtle (hap1 2025 refseq) Eretmochelys imbricata GCF_965152235.1_rEreImb1.hap1 57 2,218,003,685 131 2,771,483 49.49
205 hawksbill sea turtle (hap2 2025) Eretmochelys imbricata GCA_965152285.1_rEreImb1.hap2 41 2,224,324,466 132 2,732,219 34.07
206 High Himalaya frog Nanorana parkeri GCF_000935625.1_ASM93562v1 25,188 2,053,867,363 122,325 76,078,142 37.46
207 horn shark (hap1 2024) Heterodontus francisci GCA_036365525.1_sHetFra1.hap1 2,307 6,013,065,386 2,781 28,369,521 71.59
208 horn shark (hap2 2024) Heterodontus francisci GCA_036365495.1_sHetFra1.hap2 1,496 5,196,885,747 2,790 29,620,202 62.99
209 horn shark (sHetFra1hap1 2024) Heterodontus francisci GCF_036365525.1_sHetFra1.hap1 2,306 6,013,048,672 2,781 28,369,521 68.67
210 hourglass treefrog (maternal 2023 genbank) Dendropsophus ebraccatus GCA_027789725.1_aDenEbr1.mat 2,570 2,352,821,159 788 113,357,492 48.50
211 hourglass treefrog (paternal 2023 refseq) Dendropsophus ebraccatus GCF_027789765.1_aDenEbr1.pat 2,200 2,214,937,069 804 6,692,944 51.44
212 Hungarian meadow viper (primary hap 2022) Vipera ursinii GCF_947247035.1_rVipUrs1.1 384 1,625,023,540 1,819 363,800 51.01
213 Iberian parsley frog (aPelIbe1 2024) Pelodytes ibericus GCA_036172795.1_aPelIbe1.pri 99 2,077,659,799 262 52,400 49.33
214 Iberian ribbed newt (20211129_DDA 2022 genbank) Pleurodeles waltl GCA_026652325.1_ASM2665232v1 267 20,300,798,037 922 333,042 71.01
215 Iberian ribbed newt (hap1 20211129_DDA 2024 refseq) Pleurodeles waltl GCF_031143425.1_aPleWal1.hap1.20221129 616 19,767,450,834 1,829 368,137 71.11
216 Indian cobra (NN01 2019) Naja naja GCA_009733165.1_Nana_v5 1,897 1,768,535,092 11,910 109,672,238 40.42
217 Indian roofed turtle (hap1 2024) Pangshura tecta GCA_045781095.1_rPanTec1.hap1 629 2,165,924,875 205 41,000 32.52
218 Indian roofed turtle (hap2 2024) Pangshura tecta GCA_045781085.1_rPanTec1.hap2 449 2,174,585,695 260 52,000 32.71
219 Indo-Pacific tarpon (alternate hap 2020) Megalops cyprinoides GCA_013368575.1_fMegCyp1.alt 4,333 920,469,332 3 300 21.53
220 Indo-Pacific tarpon (primary hap 2020) Megalops cyprinoides GCA_013368585.1_fMegCyp1.pri 207 959,258,777 63 283,098 22.11
221 inshore hagfish (2023) Eptatretus burgeri GCA_900186335.3_Eburgeri_4.0 9,340 2,617,732,394 332,729 1,182,361,276 28.47
222 inshore hagfish (2026) Eptatretus burgeri GCF_056783735.1_Ebu_testis_v1 3,194 1,996,294,366 3,288 1,635,891 62.74
223 Italian wall lizard (rPodSic1.hap1.1 2024) Podarcis siculus GCA_964188175.1_rPodSic1.hap1.1 294 1,571,381,643 762 152,400 40.39
224 Italian wall lizard (rPodSic1.hap2.1 2024) Podarcis siculus GCA_964188395.1_rPodSic1.hap2.1 152 1,455,930,776 690 138,015 38.73
225 Japanese eel (BU-2020EF 2022) Anguilla japonica GCA_025169545.1_ASM2516954v1 86 1,028,695,784 725 5,880,479 28.64
226 Japanese sawshark (hap1 2024 refseq) Pristiophorus japonicus GCF_044704955.1_sPriJap1.hap1 4,318 5,923,069,295 5,985 1,196,474 71.83
227 Japanese sawshark (hap2 2024) Pristiophorus japonicus GCA_044704965.1_sPriJap1.hap2 5,626 6,365,258,383 5,953 1,190,293 73.82
228 Kemp's ridley sea turtle (hap1 2025) Lepidochelys kempii GCF_965140285.1_rLepKem1.hap1 54 2,219,022,919 219 42,700 50.06
229 Kenyan clawed frog (NASCO 2022) Xenopus borealis GCA_024363595.1_UCB_Xborealis_1 23,435 2,747,450,723 233,029 552,164,012 35.61
230 Komodo dragon (SLA01 2019) Varanus komodoensis GCF_004798865.1_ASM479886v1 1,411 1,507,945,839 19,737 14,639,079 24.66
231 Lataste's viper (alternate hap 2022) Vipera latastei GCA_024294605.1_rVipLat1.alt 6,799 1,549,880,332 1 500 44.01
232 Lataste's viper (primary hap 2022) Vipera latastei GCA_024294585.1_rVipLat1.pri 56 1,631,568,913 769 3,547,667 44.82
233 leatherback sea turtle (primary hap 2021) Dermochelys coriacea GCA_009764565.4_rDerCor1.pri.v4 41 2,164,778,715 668 5,594,612 47.14
234 leatherback sea turtle (v2 alternate hap 2020) Dermochelys coriacea GCA_009762595.2_rDerCor1.alt.v2 8,999 1,444,786,651 7 352 47.10
235 leatherback sea turtle (v4 primary hap 2021 refseq) Dermochelys coriacea GCF_009764565.3_rDerCor1.pri.v4 40 2,164,762,090 668 5,594,612 34.21
236 Leishan spiny toad (GZLS1 2019) Leptobrachium leishanense GCA_009667805.1_ASM966780v1 5,302 3,549,060,464 3,282 328,200 60.07
237 Leopard gecko (TG4126 2023) Eublepharis macularius GCA_028583425.1_MPM_Emac_v1.0 75 2,237,379,946 61 6,100 40.72
238 leopard gecko (TG4126 2023) Eublepharis macularius GCF_028583425.1_MPM_Emac_v1.0 76 2,237,397,408 62 6,101 37.92
239 lesser devil ray (2024) Mobula hypostoma GCF_963921235.1_sMobHyp1.1 200 3,475,679,493 697 139,400 54.19
240 Lilford's wall lizard (2023) Podarcis lilfordi GCA_947686815.1_rPodLil1.2 2,149 1,460,103,102 2,346 259,303 36.71
241 little skate (New England 2023) Leucoraja erinaceus GCF_028641065.1_Leri_hhj_1 1,769 2,190,861,671 862 81,010 66.54
242 lizards A.tigris stejnegeri (HBS 135688 alternate hap 2025) Aspidoscelis tigris stejnegeri GCA_023333555.2_rAspTig1.1.alt 78 1,435,021,382 42 4,200 51.36
243 lizards B.pumilum (Western Cape Province hap1 2025) Bradypodion pumilum GCA_047715975.1_rBraPum1.hap1 73 2,467,904,324 109 21,800 56.48
244 lizards B.pumilum (Western Cape Province hap2 2025) Bradypodion pumilum GCA_047715955.1_rBraPum1.hap2 82 2,479,053,460 120 24,000 56.66
245 lizards B.pumilum (Western Cape Province JTBG20231 2024) Bradypodion pumilum GCA_035047305.1_BraPum1.0 21 2,486,266,449 18 1,777 56.83
246 lizards D.cf. smithi (hap1 2024) Dibamus cf. smithi GCA_046126795.1_rDibSmi1.hap1 327 2,282,721,590 274 54,800 44.05
247 lizards D.cf. smithi (hap2 2024) Dibamus cf. smithi GCA_046126825.1_rDibSmi1.hap2 720 1,821,555,219 197 39,400 42.57
248 lizards E.multicarinata webbii (San Diego HBS135686 alternate hap 2024) Elgaria multicarinata webbii GCA_023053675.2_rElgMul1.1.alt 627 1,810,359,265 28 2,734 52.45
249 lizards F.pardalis (Fpa_1 2023) Furcifer pardalis GCA_030440675.1_ASM3044067v1 11 1,609,777,135 12 11,023 42.07
250 lizards L.agilis (primary hap 2019) Lacerta agilis GCA_009819535.1_rLacAgi1.pri 29 1,391,406,172 379 3,491,078 34.50
251 lizards P.bocagei (rPodBoc1.hap1.1 2024) Podarcis bocagei GCA_964188305.1_rPodBoc1.hap1.1 507 1,615,206,822 1,005 201,015 41.41
252 lizards P.bocagei (rPodBoc1.hap2.1 2024) Podarcis bocagei GCA_964188325.1_rPodBoc1.hap2.1 627 1,473,581,329 817 163,400 39.42
253 lizards P.erhardii (rPodErh1.hap1.1 2024) Podarcis erhardii GCA_964252035.1_rPodErh1.hap1.1 326 1,495,994,634 836 167,200 38.58
254 lizards P.erhardii (rPodErh1.hap2.1 2024) Podarcis erhardii GCA_964251985.1_rPodErh1.hap2.1 647 1,477,748,000 811 162,200 37.96
255 lizards P.melisellensis (rPodMel1.hap1.1 2024) Podarcis melisellensis GCA_964234715.1_rPodMel1.hap1.1 386 1,574,923,724 823 164,600 40.21
256 lizards P.melisellensis (rPodMel1.hap2.1 2024) Podarcis melisellensis GCA_964234825.1_rPodMel1.hap2.1 200 1,437,044,901 754 150,800 37.90
257 lizards P.pityusensis (hap1.2 2024) Podarcis pityusensis GCF_964106645.1_rPodPit1.hap1.2 336 1,515,373,509 1,506 301,200 51.02
258 lizards P.pityusensis (rPodPit1.hap1.2 2024) Podarcis pityusensis GCA_964106645.2_rPodPit1.hap1.2 336 1,515,373,509 1,506 301,200 38.22
259 lizards P.pityusensis (rPodPit1.hap2.2 2024) Podarcis pityusensis GCA_964106635.2_rPodPit1.hap2.2 183 1,417,079,496 1,365 273,000 37.15
260 lizards P.tiliguerta (hap2.2 2025) Podarcis tiliguerta GCA_965153305.2_rPodTil1.hap2.2 307 1,394,940,404 1,003 200,600 49.04
261 lizards P.vaucheri (hap1.1 2025) Podarcis vaucheri GCA_965113315.1_rPodVau1.hap1.1 285 1,614,928,384 949 189,800 41.38
262 lizards P.vaucheri (hap2.1 2025) Podarcis vaucheri GCA_965113305.1_rPodVau1.hap2.1 151 1,510,738,089 852 170,400 40.40
263 lizards T.scincoides (rTilSci1hap2 2024) Tiliqua scincoides GCF_035046505.1_rTilSci1.hap2 350 1,623,332,312 372 74,400 37.07
264 loggerhead turtle (hap1 2025 genbank) Caretta caretta GCA_965140235.1_rCarCar1.hap1 36 2,217,236,305 61 583,717 34.66
265 loggerhead turtle (hap1 2025 refseq) Caretta caretta GCF_965140235.1_rCarCar1.hap1 36 2,217,236,305 61 583,717 34.66
266 loggerhead turtle (hap2 2025) Caretta caretta GCA_965140275.1_rCarCar1.hap2 33 2,206,382,585 52 686,059 34.41
267 loggerhead turtle (v1 SJ_126:Eziel1 2022) Caretta caretta GCF_023653815.1_GSC_CCare_1.0 2,008 2,134,012,717 745 2,128,794 33.92
268 loggerhead turtle (v2 SJ_126:Eziel1 2022) Caretta caretta GCF_023653815.2_GSC_CCare_1.0 2,007 2,133,995,980 744 2,128,694 33.92
269 Madagascar ground gecko (Pp20150507F 2025) Paroedura picta GCF_049243985.1_Ppicta_v3.0 80 1,751,518,920 2,618 18,643,685 49.69
270 mainland tiger snake Notechis scutatus GCF_900518725.1_TS10Xv2-PRI 52,414 1,665,525,958 79,478 80,606,990 40.26
271 many-banded krait (BM01 2022) Bungarus multicinctus GCA_023653725.1_ASM2365372v1 448 1,593,755,901 1,631 11,947,689 40.99
272 marbled electric ray (2025) Torpedo marmorata GCA_977017645.1_sTorMar1.1 4,566 6,221,104,460 3,402 349,900 78.63
273 marbled whiptail (SIMRID8450 2020) Aspidoscelis marmoratus GCA_014337955.1_AspMar1.0 3,826 1,639,530,780 166,840 92,948,330 33.03
274 marine toad (2024) Rhinella marina GCA_900303285.2_aRhiMar1.3 7,124 3,473,313,001 6,072 8,571,329 73.70
275 McCord's box turtle (ISIS_951048 2018) Cuora mccordi GCA_003846335.1_ASM384633v1 91,872 2,382,737,048 50,040 129,458,769 44.90
276 meadow viper (alternate hap 2022) Vipera ursinii GCA_947247025.1_rVipUrs1.1_alternate_haplotype 9,575 1,180,062,022 12 2,400 41.76
277 meadow viper (primary hap 2022) Vipera ursinii GCA_947247035.1_rVipUrs1.1 384 1,625,023,540 1,819 363,800 45.37
278 Mexican burrowing toad (hap1 2024) Rhinophrynus dorsalis GCA_037306005.1_aRhiDor1.hap1 464 4,745,569,335 2,032 406,419 53.56
279 Mexican burrowing toad (hap2 2024) Rhinophrynus dorsalis GCA_037306015.1_aRhiDor1.hap2 656 4,535,323,468 2,009 401,800 53.02
280 Mexican gopher tortoise (maternal hap 2022) Gopherus flavomarginatus GCA_025201925.1_rGopFla2.mat.asm 622 2,460,558,587 1,866 89,638,462 50.28
281 Mexican gopher tortoise (WGS:JAMKFC01 2022) Gopherus flavomarginatus GCF_025201925.1_rGopFla2.mat.asm 621 2,460,542,086 1,866 89,638,462 34.69
282 Mexican gopher tortoise (WGS:JAMKFD01 2022) Gopherus flavomarginatus GCA_025201965.1_rGopFla2.pat.asm 2,992 2,584,697,711 1,790 116,054,540 34.08
283 Mexican spadefoot toad (hap1 2026) Spea multiplicata GCA_054668525.1_aSpeMul1.hap1 504 959,415,552 267 44,200 40.92
284 Mexican spadefoot toad (hap2 2026) Spea multiplicata GCA_054668515.1_aSpeMul1.hap2 292 940,088,435 264 44,500 40.19
285 mimic poison frog (alternate hap 2023) Ranitomeya imitator GCA_032442605.1_aRanImi1.alt 2 4,262,647 0 0 56.37
286 mimic poison frog (primary hap 2023 genbank) Ranitomeya imitator GCA_032444005.1_aRanImi1.pri 1,673 5,956,630,009 765 80,159 77.60
287 mimic poison frog (primary hap 2023 refseq) Ranitomeya imitator GCF_032444005.1_aRanImi1.pri 1,672 5,956,610,564 765 80,159 76.48
288 Mississippi paddlefish Polyodon spathula GCF_017654505.1_ASM1765450v1 4,235 1,542,083,420 2,963 1,696,468 36.87
289 Murray river turtle (Brisbane River MOO-44397 2024) Emydura macquarii macquarii GCF_026122565.2_CSIRO-AGI_Emac_v2 3,735 1,924,425,589 0 0 25.44
290 Nile crocodile (hap1 2026) Crocodylus niloticus GCA_054954115.1_rCroNil1.hap1 123 2,340,765,025 36 6,300 41.31
291 Nile crocodile (hap2 2026) Crocodylus niloticus GCA_054825085.1_rCroNil1.hap2 73 2,344,593,006 51 8,300 41.23
292 Northern rubber boa (HBS 135849 alternate hap 2022) Charina bottae GCA_023362785.1_rChaBot1.0.a 224 1,703,974,979 84 8,400 42.47
293 Northern rubber boa (HBS 135849 primary hap 2022) Charina bottae GCA_023362775.1_rChaBot1.0.p 289 1,804,939,834 85 8,500 42.87
294 Northwestern pond turtle (WTP2003 alternate hap 2022) Actinemys marmorata GCA_022086895.1_rActMar1.a 2,508 2,209,870,670 1,800 180,000 48.91
295 Northwestern pond turtle (WTP2003 primary hap 2022) Actinemys marmorata GCA_022086475.1_rActMar1.p 48 2,301,118,547 148 14,823 48.89
296 nurse shark (FLO180531 2022) Ginglymostoma cirratum GCA_024137785.1_ASM2413778v1 289 4,357,855,346 68,882 1,884,183,983 37.20
297 olive python (hap1 2023) Liasis olivaceus GCA_030867105.1_rLiaOli1.hap1 43 1,486,119,866 73 297,716 30.16
298 olive python (hap2 2023) Liasis olivaceus GCA_030867085.1_rLiaOli1.hap2 65 1,478,263,624 93 5,065,312 29.98
299 Pacific lamprey (Columbia River large-bodied, stream-maturing ecotype CRITFC18_GStd-0006 2020) Entosphenus tridentatus GCA_014621495.2_ETRf_v1 141,124 927,744,424 63,604 129,406,369 45.62
300 Pacific ridley (hap1 2025) Lepidochelys olivacea GCA_965140295.1_rLepOli2.hap1 44 2,206,585,630 69 387,990 34.74
301 Pacific ridley (hap1 2025) Lepidochelys olivacea GCF_965140295.1_rLepOli2.hap1 43 2,206,568,898 69 387,990 50.14
302 Pacific ridley (hap2 2025) Lepidochelys olivacea GCA_965140255.1_rLepOli2.hap2 40 2,208,046,144 76 899,288 34.74
303 painted frog (alternate hap 2022) Discoglossus pictus GCA_027410455.1_aDisPic1.alt 4,005 1,937,156,624 76 1,862 53.01
304 painted frog (primary hap 2022) Discoglossus pictus GCA_027410445.1_aDisPic1.pri 1,318 3,872,602,052 3,681 62,395,995 55.23
305 palmate newt (alternate hap 2024) Lissotriton helveticus GCA_964258895.1_aLisHel1.1_alternate_haplotype 233,719 20,159,769,239 123 24,600 49.23
306 palmate newt (primary hap 2024) Lissotriton helveticus GCA_964261635.1_aLisHel1.1 448 23,170,028,842 5,245 1,049,000 63.58
307 palmate newt (primary hap 2026) Lissotriton helveticus GCA_964261635.2_aLisHel1.2 448 23,170,028,842 5,245 1,049,000 47.60
308 Papuan ground boa (hap1 2024) Candoia aspera GCA_035125265.1_rCanAsp1.hap1 180 1,529,331,567 99 19,800 33.58
309 Papuan ground boa (hap2 2024 genbank) Candoia aspera GCA_035149785.1_rCanAsp1.hap2 150 1,530,827,941 101 20,200 33.56
310 Papuan ground boa (hap2 2024 refseq) Candoia aspera GCF_035149785.1_rCanAsp1.hap2 149 1,530,810,380 101 20,200 33.56
311 Peter's clawed frog (aXenPet1 2024) Xenopus petersii GCA_038501915.1_aXenPet1.maternal.cur 1,183 2,613,116,200 1,072 214,400 44.51
312 Peter's clawed frog (aXenPet1 2024) Xenopus petersii GCA_038501925.1_aXenPet1.paternal.cur 888 2,883,796,191 500 100,000 45.47
313 pitted-shelled turtle (YL-2023 2023 genbank) Carettochelys insculpta GCA_033958435.1_ASM3395843v1 134 2,180,317,067 12 2,400 47.95
314 pitted-shelled turtle (YL-2023 2023 refseq) Carettochelys insculpta GCF_033958435.1_ASM3395843v1 135 2,180,333,506 12 2,400 34.14
315 plains spadefoot toad (alternate hap 2022) Spea bombifrons GCA_027382365.2_aSpeBom1.2.alt 1,516 785,569,511 0 0 34.39
316 plains spadefoot toad (primary hap 2022) Spea bombifrons GCA_027358695.2_aSpeBom1.2.pri 17 987,655,159 102 3,822,643 41.92
317 plains spadefoot toad (primary hap 2022) Spea bombifrons GCF_027358695.1_aSpeBom1.2.pri 17 987,655,159 102 3,822,643 36.29
318 pool frog (hap1 2025) Pelophylax lessonae GCA_965119305.1_aPelLes1.hap1.1 1,328 5,811,246,175 3,044 608,800 60.24
319 pool frog (hap2 2025) Pelophylax lessonae GCA_965119315.1_aPelLes1.hap2.1 977 5,762,139,629 2,703 540,600 60.12
320 prickly gecko (False Entrance Well CCM8104 2023) Heteronotia binoei GCF_032191835.1_APGP_CSIRO_Hbin_v1 661 2,633,472,656 1,608 160,800 46.85
321 Puerto Rican coqui (hap1 2024 refseq) Eleutherodactylus coqui GCF_035609145.1_aEleCoq1.hap1 956 3,371,297,528 659 131,800 54.01
322 Puerto Rican coqui (hap2 2024) Eleutherodactylus coqui GCA_035609135.1_aEleCoq1.hap2 827 3,362,534,901 685 137,000 53.92
323 Puget Sound dogfish (hap1 2025) Squalus suckleyi GCA_050613905.1_sSquSuc5.hap1 3,203 5,298,610,218 4,275 828,744 70.15
324 Puget Sound dogfish (sSquSuc3hap2 2025) Squalus suckleyi GCA_050613895.1_sSquSuc5.hap2 1,862 4,657,981,142 4,144 798,800 67.98
325 red stingray (2025) Hemitrygon akajei GCF_048418815.1_sHemAka1.3 261 4,229,649,561 2,066 214,268,171 49.67
326 red-eared slider turtle Trachemys scripta elegans GCF_013100865.1_CAS_Tse_1.0 138 2,126,199,303 25,390 82,148,119 30.75
327 reedfish (primary hap 2021) Erpetoichthys calabaricus GCA_900747795.4_fErpCal1.3 169 3,613,551,089 1,431 29,707,657 62.17
328 reedfish (v3 alternate hap 2021) Erpetoichthys calabaricus GCA_900700845.3_fErpCal1.3_alternate_haplotype 17,082 3,014,944,822 17 314,459 46.95
329 Reeves's turtle Mauremys reevesii GCF_016161935.1_ASM1616193v1 230 2,367,607,229 398 39,800 34.64
330 Riggenbach's reed frog (aHypRig1 alternate hap 2024) Hyperolius riggenbachi GCA_040937895.1_aHypRig1.alt 14,077 9,708,340,052 19 3,635 71.57
331 Riggenbach's reed frog (aHypRig1 primary hap 2024) Hyperolius riggenbachi GCF_040937935.1_aHypRig1.pri 477 4,915,935,452 3,039 606,696 60.27
332 Riggenbach's reed frog (primary hap 2024) Hyperolius riggenbachi GCA_040937935.1_aHypRig1.pri 477 4,915,935,452 3,039 606,696 60.27
333 Ringneck snake (HBS135679 primary hap 2022) Diadophis punctatus similis GCA_023053685.1_rDiaPun1.0.p 444 1,783,023,707 723 72,300 48.68
334 royal ground snake (hap1 2023 refseq) Erythrolamprus reginae GCF_031021105.1_rEryReg1.hap1 400 1,964,049,041 1,391 278,200 59.53
335 royal ground snake (hap2 2023) Erythrolamprus reginae GCA_031021085.1_rEryReg1.hap2 1,128 2,038,227,610 0 0 53.01
336 royal ground snake (hap3 2023) Erythrolamprus reginae GCA_031001685.1_rEryReg1.hap3 3,543 2,090,234,102 0 0 57.37
337 rufous frog (hap1 2023) Leptodactylus fuscus GCA_031893025.1_aLepFus1.hap1 2,266 2,307,711,212 973 11,371,605 55.98
338 rufous frog (hap2 2023 genbank) Leptodactylus fuscus GCA_031893055.1_aLepFus1.hap2 1,266 2,197,996,823 976 20,381,759 59.61
339 rufous frog (hap2 2023 refseq) Leptodactylus fuscus GCF_031893055.1_aLepFus1.hap2 1,265 2,197,979,350 976 20,381,759 54.16
340 rufous frog (hap2 2026) Leptodactylus fuscus GCA_031893055.2_aLepFus1.hap2 1,265 2,197,979,350 976 20,381,759 62.44
341 Sabana Surinam toad (BJE4294 2021) Pipa parva GCA_019650415.1_UCB_Ppar_1.0 283,592 1,370,893,480 67,859 8,173,599 36.83
342 San Diegan legless lizard (HBS135921 alternate hap 2023) Anniella stebbinsi GCA_029215795.1_rAnnSte1.0.hap2 91 1,891,076,299 31 3,100 39.31
343 San Diegan legless lizard (HBS135921 primary hap 2023) Anniella stebbinsi GCA_029215775.1_rAnnSte1.0.hap1 134 1,890,507,581 21 2,100 39.04
344 San Diegan tiger whiptail (alternate hap HBS 135688 2022) Aspidoscelis tigris stejnegeri GCA_023333555.1_rAspTig1.0.a 227 1,675,887,475 44 4,400 39.22
345 San Diegan tiger whiptail (v1.1 HBS 135688 primary hap 2025) Aspidoscelis tigris stejnegeri GCA_023333525.2_rAspTig1.1.pri 186 1,673,115,766 110 11,000 39.12
346 San Diego alligator lizard (HBS135686 alternate hap 2022) Elgaria multicarinata webbii GCA_023053675.1_rElgMul1.0.a 627 1,810,359,265 27 2,700 40.46
347 San Diego alligator lizard (v1.0 HBS135686 primary hap 2022) Elgaria multicarinata webbii GCA_023053635.1_rElgMul1.0.p 85 1,790,509,355 23 2,300 40.44
348 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 genbank) Elgaria multicarinata webbii GCA_023053635.2_rElgMul1.1.pri 35 1,790,519,499 73 12,700 40.44
349 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 refseq) Elgaria multicarinata webbii GCF_023053635.1_rElgMul1.1.pri 34 1,790,500,004 73 12,700 40.44
350 San Diego ringneck snake (HBS135679 alternate hap 2022) Diadophis punctatus similis GCA_023053665.1_rDiaPun1.0.a 2,064 1,577,714,162 572 57,200 50.64
351 sand lizard (alternate hap 2019) Lacerta agilis GCA_009819545.1_rLacAgi1.alt 12,660 1,429,379,209 2 120 34.27
352 sand lizard (primary hap 2019) Lacerta agilis GCF_009819535.1_rLacAgi1.pri 29 1,391,404,169 379 3,491,078 34.50
353 Sardinian treefrog (hap1 2023 refseq) Hyla sarda GCF_029499605.1_aHylSar1.hap1 3,474 4,142,159,359 2,297 459,227 64.33
354 Sardinian treefrog (hap2 2023) Hyla sarda GCA_029493135.1_aHylSar1.hap2 2,802 4,080,080,015 2,097 419,128 63.87
355 Schlegel's Japanese gecko Gekko japonicus GCF_001447785.1_Gekko_japonicus_V1.1 191,500 2,490,274,461 143,970 88,227,448 39.16
356 sea lamprey (alternate hap 2020) Petromyzon marinus GCA_010993595.1_kPetMar1.alt 4,064 841,632,067 11 24,549 49.81
357 sea lamprey (Great Lakes invasive population PM22_M1 alternate hap 2025) Petromyzon marinus GCA_048941845.1_UKy_Petmar_22M1.alt1.0 7,128 1,256,618,650 0 0 65.21
358 sea lamprey (Great Lakes invasive population PM22_M1 primary hap 2025 genbank) Petromyzon marinus GCA_048934315.1_UKy_Petmar_22M1.pri1.0 1,203 1,808,332,251 992 99,200 68.15
359 sea lamprey (Great Lakes invasive population PM22_M1 primary hap 2025 refseq) Petromyzon marinus GCF_048934315.1_UKy_Petmar_22M1.pri1.0 1,204 1,808,348,452 992 99,200 68.17
360 sea lamprey (primary hap 2020) Petromyzon marinus GCF_010993605.1_kPetMar1.pri 1,434 1,089,050,413 930 15,013,687 50.62
361 sharpnose sevengill shark (hap1 2024 genbank) Heptranchias perlo GCA_035084215.1_sHepPer1.hap1 1,880 3,249,935,392 1,834 366,800 57.50
362 sharpnose sevengill shark (hap1 2024 refseq) Heptranchias perlo GCF_035084215.1_sHepPer1.hap1 1,879 3,249,915,908 1,834 366,800 57.50
363 sharpnose sevengill shark (hap2 2024) Heptranchias perlo GCA_035084135.1_sHepPer1.hap2 1,194 3,059,754,027 1,695 339,000 55.71
364 sharpnose sevengill shark (hap2 2024) Heptranchias perlo GCA_035084135.2_sHepPer1.hap2 1,143 3,087,787,698 1,771 354,200 56.06
365 Shaw's sea snake (ss_UAE728 2024) Hydrophis curtus GCA_037043045.1_ASM3704304v1 809 1,925,084,451 641 1,254,247 51.54
366 Skyros wall lizard (rPodGai1.hap1.2 2024) Podarcis gaigeae GCF_964106915.1_rPodGai1.hap1.2 211 1,514,643,635 883 176,600 51.29
367 Skyros wall lizard (rPodGai1.hap2.1 2024) Podarcis gaigeae GCA_964106785.1_rPodGai1.hap2.1 127 1,422,314,362 783 156,600 37.52
368 Skyros wall lizard (v1 hap1 2024) Podarcis gaigeae GCA_964106915.1_rPodGai1.hap1.1 211 1,514,643,635 883 176,600 38.22
369 Skyros wall lizard (v2 hap1 2024) Podarcis gaigeae GCA_964106915.2_rPodGai1.hap1.2 211 1,514,643,635 883 176,600 38.22
370 small-spotted catshark (primary hap 2021) Scyliorhinus canicula GCF_902713615.2_sScyCan1.2 646 4,220,406,627 7,146 64,220,747 72.29
371 smaller spotted catshark (alternate hap 2021) Scyliorhinus canicula GCA_902713625.2_sScyCan1.2_alternate_haplotype 26,649 3,867,000,599 6 319 51.57
372 smaller spotted catshark (v1.2 primary hap 2021 genbank) Scyliorhinus canicula GCA_902713615.2_sScyCan1.2 645 4,220,389,930 7,146 64,220,747 51.42
373 smalltooth sawfish (alternate hap 2019) Pristis pectinata GCA_009764485.1_sPriPec2.alt 10,892 1,694,166,684 0 0 38.34
374 smalltooth sawfish (primary hap 2019) Pristis pectinata GCA_009764475.2_sPriPec2.1.pri 173 2,267,857,790 698 20,562,876 54.49
375 smalltooth sawfish (v2.1 primary hap 2019 refseq) Pristis pectinata GCF_009764475.1_sPriPec2.1.pri 172 2,267,840,987 698 20,562,876 54.48
376 snake N.helvetica (rNatHel1.hap1.1 2024) Natrix helvetica GCA_964273705.1_rNatHel1.hap1.1 487 1,777,516,490 2,010 402,000 46.17
377 snake N.helvetica (rNatHel1.hap2.1 2024) Natrix helvetica GCA_964273795.1_rNatHel1.hap2.1 502 1,513,526,581 1,674 334,800 43.90
378 South American lungfish (Aquarium Glaser DD20211129a alternate hap 2024) Lepidosiren paradoxa GCA_040438655.1_ASM4043865v1 1,072,861 46,159,945,069 0 0 81.39
379 Southern California legless lizard (HBS135921 hap1 2026) Anniella stebbinsi GCA_051312515.2_rAnnSte1.2_hap1 55 1,885,870,326 67 6,700 46.70
380 Southern California legless lizard (HBS135921 hap2 2026) Anniella stebbinsi GCA_051312545.2_rAnnSte1.2_hap2 43 1,893,391,702 83 8,300 46.86
381 southern Darwin's frog (hap1 2025) Rhinoderma darwinii GCA_050947455.1_aRhiDar2.hap1 2,943 3,657,529,801 1,606 312,300 63.44
382 Southern dwarf chameleon (Gauteng JTBG20232 2024) Bradypodion ventrale GCA_035047345.1_BraVen1.1 113 2,373,187,502 22 2,189 54.44
383 Southern Pacific rattlesnake (HBS135844 alternate hap 2022) Crotalus helleri GCA_024509165.1_rCroOre1.a 340 1,628,461,744 34 782 44.44
384 Southern Pacific rattlesnake (HBS135844 primary hap 2022) Crotalus helleri GCA_024509115.1_rCroOre1.0.p 696 1,564,714,769 443 221,500 44.94
385 Southwestern pond turtle (HBS135687 alternate hap 2022) Actinemys pallida GCA_023634275.1_rActPal1.0.a 260 2,348,990,949 64 6,400 36.29
386 Southwestern pond turtle (HBS135687 primary hap 2022) Actinemys pallida GCA_023634205.1_rActPal1.0.p 53 2,326,928,347 53 5,300 36.13
387 spotted gar Lepisosteus oculatus GCF_000242695.1_LepOcu1 1,925 945,874,548 43,276 76,460,189 22.84
388 spotted gar (fLepOcu1hap1 2024) Lepisosteus oculatus GCA_040954845.1_fLepOcu1.hap1 831 1,110,649,520 76 15,200 34.48
389 spotted gar (fLepOcu1hap2 2024) Lepisosteus oculatus GCF_040954835.1_fLepOcu1.hap2 816 1,200,589,847 95 19,000 38.23
390 spotted gar (hap2 2024) Lepisosteus oculatus GCA_040954835.1_fLepOcu1.hap2 817 1,200,606,178 95 19,000 38.22
391 spotted ratfish (hap1 2024) Hydrolagus colliei GCA_035084065.1_sHydCol1.hap1 1,042 1,097,847,766 2,088 417,600 44.94
392 spotted ratfish (hap2 2024) Hydrolagus colliei GCA_035084275.1_sHydCol1.hap2 532 1,003,172,678 1,952 390,400 44.82
393 starry smooth-hound (sMusAst1.hap1.1 2024) Mustelus asterias GCA_964213995.1_sMusAst1.hap1.1 5,314 3,679,792,345 3,590 718,000 54.95
394 starry smooth-hound (sMusAst1.hap2.1 2024) Mustelus asterias GCA_964214025.1_sMusAst1.hap2.1 4,403 3,476,679,425 3,505 701,000 53.51
395 starry smooth-hound shark (hap1.1 2024) Mustelus asterias GCF_964213995.1_sMusAst1.hap1.1 5,313 3,679,774,521 3,590 718,000 54.95
396 sterlet (v2 Gen_M01 2020) Acipenser ruthenus GCF_010645085.2_ASM1064508v2 3,368 1,825,187,678 6,251 1,247,812 43.29
397 Suwannee snapping turtle (hap1 2023) Macrochelys suwanniensis GCA_033296515.1_rMacSuw1.hap1 366 2,132,261,265 290 58,000 33.43
398 Suwannee snapping turtle (hap2 2023) Macrochelys suwanniensis GCA_033349115.1_rMacSuw1.hap2 199 1,937,254,095 361 72,200 32.82
399 tailed frog (A.truei hap1 2024 genbank) Ascaphus truei GCA_040206685.1_aAscTru1.hap1 3,549 3,722,616,900 6,020 1,204,076 55.73
400 tailed frog (A.truei hap1 2024 refseq) Ascaphus truei GCF_040206685.1_aAscTru1.hap1 3,549 3,722,616,900 6,020 1,204,076 55.73
401 tailed frog (A.truei hap2 2024) Ascaphus truei GCA_040206675.1_aAscTru1.hap2 2,779 3,660,446,095 6,023 1,204,703 55.25
402 tarantolino (hap1 2023) Euleptes europaea GCA_029931775.1_rEulEur1.hap1 592 1,781,933,648 153 4,045,040 53.70
403 thorny skate (alternate hap CabotCenter1 2020) Amblyraja radiata GCA_010909745.1_sAmbRad1.alt 21,992 1,462,441,988 3 94 57.78
404 thorny skate (v1.1 primary hap CabotCenter1 2020 genbank) Amblyraja radiata GCA_010909765.2_sAmbRad1.1.pri 958 2,558,801,738 3,753 190,972,533 63.69
405 thorny skate (v1.1 primary hap CabotCenter1 2020 refseq) Amblyraja radiata GCF_010909765.2_sAmbRad1.1.pri 957 2,558,784,953 3,753 190,972,533 52.28
406 three-toed box turtle Terrapene triunguis GCF_002925995.2_T_m_triunguis-2.0 48,497 2,562,212,628 53,635 131,526,270 31.74
407 tiger rattlesnake Crotalus tigris GCF_016545835.1_ASM1654583v1 4,228 1,612,002,213 0 0 42.93
408 tiny Cayenne caecilian (alternate hap 2019) Microcaecilia unicolor GCA_901765105.1_aMicUni1.1_alternate_haplotype 23,870 3,698,322,623 1 31 52.19
409 tiny cayenne caecilian (primary hap 2021) Microcaecilia unicolor GCF_901765095.2_aMicUni1.2 1,080 4,685,923,413 2,452 47,437,278 71.20
410 tiny Cayenne caecilian (v2 2021) Microcaecilia unicolor GCA_901765095.2_aMicUni1.2 1,081 4,685,939,421 2,452 47,437,278 52.44
411 tope shark (hap1 2025) Galeorhinus galeus GCA_977071755.1_sGalGal3_haplotype_1_assembly_v1 7,118 4,816,164,632 3,659 727,000 65.91
412 tope shark (hap2 2025) Galeorhinus galeus GCA_977071745.1_sGalGal3_haplotype_2_assembly_v1 37 2,685,485,351 1,556 289,000 52.58
413 Townsend's dwarf sphaero (gecko TG3544 2022) Sphaerodactylus townsendi GCF_021028975.2_MPM_Stown_v2.3 1,742 1,810,846,735 2,590 229,288 38.60
414 tropical clawed frog Xenopus tropicalis GCF_000004195.4_UCB_Xtro_10.0 167 1,451,301,209 684 2,839,231 41.76
415 Tungara frog (aEngPut4 maternal hap 2024 refseq) Engystomops pustulosus GCF_040894005.1_aEngPut4.maternal 936 2,158,203,323 436 87,200 52.56
416 Tungara frog (aEngPut4 paternal hap 2024) Engystomops pustulosus GCA_040894015.1_aEngPut4.paternal 819 2,081,032,022 507 101,225 52.62
417 turtles (alternate hap 2025) Hydromedusa tectifera GCA_049999975.1_rHydTec1.alt 624 1,846,295,323 0 0 41.25
418 turtles (alternate hap 2025) Pelomedusa somalica GCA_051311595.1_rPelSom1.alt 1,298 1,942,434,905 0 0 40.70
419 turtles (alternate hap 2025) Chitra chitra GCA_052575425.1_rChiChi1.alt 940 101,279,406 0 0 49.00
420 turtles (hap1 2025) Dermatemys mawii GCA_054099655.1_rDerMaw1.hap1 151 1,951,716,569 132 24,900 41.96
421 turtles (hap2 2025) Dermatemys mawii GCA_054099715.1_rDerMaw1.hap2 162 1,926,746,312 137 23,500 39.95
422 turtles (MuskTurtle02 alternate hap 2023) Sternotherus odoratus GCA_032164215.1_rSteOdo2_a1.0 75 1,745,472,519 1,045 209,000 40.91
423 turtles (primary hap 2025) Hydromedusa tectifera GCA_049999965.1_rHydTec1.pri 39 1,849,762,660 114 443,085 41.28
424 turtles (primary hap 2025) Pelomedusa somalica GCA_051311615.1_rPelSom1.pri 67 1,948,856,296 85 2,048,540 40.71
425 turtles (primary hap 2025) Chitra chitra GCA_052575445.1_rChiChi1.pri 37 2,191,272,715 25 4,400 46.23
426 two-lined caecilian (alternate hap 2019) Rhinatrema bivittatum GCA_901001175.1_aRhiBiv1.1_alternate_haplotype 27,231 4,615,304,139 2 63 43.78
427 two-lined caecilian (v1.2 primary hap 2021 genbank) Rhinatrema bivittatum GCA_901001135.2_aRhiBiv1.2 1,330 5,319,239,186 3,573 33,955,840 66.85
428 two-lined caecilian (v1.2 primary hap 2021 refseq) Rhinatrema bivittatum GCF_901001135.2_aRhiBiv1.2 1,329 5,319,222,779 3,573 33,955,840 44.11
429 Tyrrhenian wall lizard (hap1 2025) Podarcis tiliguerta GCA_965153285.1_rPodTil1.hap1.1 258 1,462,327,121 1,024 204,800 37.08
430 Tyrrhenian wall lizard (hap1.1 2025) Podarcis tiliguerta GCF_965153285.1_rPodTil1.hap1.1 258 1,462,327,121 1,024 204,800 49.67
431 Tyrrhenian wall lizard (hap2 2025) Podarcis tiliguerta GCA_965153305.1_rPodTil1.hap2.1 306 1,382,196,565 983 196,600 36.68
432 valley gartersnake (HBS 135685 alternate hap 2023) Thamnophis sirtalis fitchi GCA_029207655.1_rThaSir1.0.hap2 226 1,683,046,358 403 40,300 45.12
433 valley gartersnake (HBS 135685 primary hap 2023) Thamnophis sirtalis fitchi GCA_029207665.1_rThaSir1.0.hap1 413 1,621,019,271 446 44,600 46.30
434 viviparous/common lizard Zootoca vivipara GCF_011800845.1_UG_Zviv_1 25,252 1,464,300,591 51,275 43,421,287 34.22
435 warty newt (alternate hap 2024) Triturus cristatus GCA_964204665.1_aTriCri1.1_alternate_haplotype 179,455 11,940,550,875 338 67,600 52.19
436 warty newt (primary hap 2024) Triturus cristatus GCA_964204655.1_aTriCri1.1 1,304 22,324,633,092 4,698 939,600 50.89
437 West African lungfish (Aquarium Glaser DD20220218a alternate hap 2024) Protopterus annectens GCA_040939495.1_ASM4093949v1 65,665 19,769,795,207 0 0 57.35
438 West African lungfish (Aquarium Glaser DD20220218a primary hap 2024) Protopterus annectens GCA_040939525.1_ASM4093952v1 7,125 40,524,173,670 24,438 5,865,120 72.73
439 West African lungfish (FY-2018-M 2021) Protopterus annectens GCF_019279795.1_PAN1.0 12,668 40,054,341,269 0 993,106,966 70.73
440 western chorus frog (Ontario Canada JT22Mhap1 2026) Pseudacris triseriata GCA_053478255.2_aPseTri1.hap1 1,100 3,997,233,219 1,837 186,300 65.53
441 western fence lizard (IW3139 2022) Sceloporus occidentalis GCA_023333635.1_rSceOcc1.0.a 1,771 3,186,658,811 51 5,100 40.63
442 western fence lizard (IW3139 primary hap 2022) Sceloporus occidentalis GCA_023333645.1_rSceOcc1.0.p 608 2,856,356,971 51 5,100 37.86
443 western painted turtle (hap1 R12L10 2024) Chrysemys picta bellii GCA_035221575.1_ASM3522157v1 5,376 2,336,887,892 2,300 576,246 47.33
444 western painted turtle (hap2 R12L10 2024) Chrysemys picta bellii GCA_035221595.1_ASM3522159v1 9,371 2,329,101,047 1,992 427,110 47.33
445 western painted turtle (R12L10 2023 refseq) Chrysemys picta bellii GCF_011386835.1_ASM1138683v2 9,850 2,372,089,908 1,270 541,410 47.39
446 western painted turtle (v5 RCT428 2020) Chrysemys picta bellii GCF_000241765.5_Chrysemys_picta_BioNano-3.0.4 74,775 2,480,260,873 184,311 309,640,510 39.11
447 western red-tailed skink (HBS 135693 alternate hap 2022) Plestiodon gilberti rubricaudatus GCA_026170595.1_rPleGil1.0.hap2 39 1,571,222,493 15 1,500 36.98
448 western red-tailed skink (HBS 135693 primary hap 2022) Plestiodon gilberti rubricaudatus GCA_026170395.1_rPleGil1.0.hap1 50 1,447,229,999 12 1,200 37.05
449 western spadefoot toad (hap1 HBS 135690 2023) Spea hammondii GCA_029215705.1_aSpeHam1.0.hap1 479 1,142,014,214 198 19,800 41.85
450 western spadefoot toad (hap2 HBS 135690 2023) Spea hammondii GCA_029215755.1_aSpeHam1.0.hap2 351 1,155,539,324 190 19,000 42.27
451 western terrestrial garter snake (alternate hap 2019) Thamnophis elegans GCA_009769695.1_rThaEle1.alt 13,623 1,814,330,211 19 1,330,160 43.98
452 western terrestrial garter snake (primary hap 2019) Thamnophis elegans GCA_009769535.1_rThaEle1.pri 365 1,672,190,305 1,518 38,185,703 42.64
453 western terrestrial garter snake (primary hap 2019) Thamnophis elegans GCF_009769535.1_rThaEle1.pri 365 1,672,190,305 1,518 38,185,703 42.64
454 whale shark (14 2022 Squalomix) Rhincodon typus GCF_021869965.1_sRhiTyp1.1 16,684 2,880,448,384 95,208 241,885,584 34.15
455 whale shark (Ralph 2017 Emory U) Rhincodon typus GCF_001642345.1_ASM164234v2 57,334 2,931,599,576 900,650 917,010 38.86
456 white-bellied softnose skate (Sanriku21f 2025) Rhinoraja longicauda GCF_053455715.1_sRhiLon1.1 3,942 2,198,843,048 5,336 2,667,105 62.39
457 whitespotted bambooshark Chiloscyllium plagiosum GCF_004010195.1_ASM401019v2 101,977 3,556,477,427 156,554 204,109,657 38.22
458 whitespotted bambooshark (BGI_BamShark_2017 2019) Chiloscyllium plagiosum GCA_004010195.1_ASM401019v1 601,049 3,776,550,609 159,245 204,247,630 39.30
459 yellow-bellied toad (maternal hap 2024) Bombina variegata GCA_964205305.1_aBomVar4.maternal.1 3,497 9,112,230,460 6,811 1,362,200 70.74
460 yellow-bellied toad (paternal hap 2024) Bombina variegata GCA_964205295.1_aBomVar4.paternal.1 4,757 9,369,791,316 6,671 1,334,200 70.82
461 yellow-spotted Amazon River turtle (alternate hap 2025) Podocnemis unifilis GCA_050000025.1_rPodUni1.alt 624 1,846,295,323 0 0 34.16
462 yellow-spotted Amazon River turtle (alternate hap 2026) Podocnemis unifilis GCA_050000025.2_rPodUni1.alt 2,436 2,426,844,641 0 0 48.44
463 yellow-spotted Amazon River turtle (primary hap 2025) Podocnemis unifilis GCA_050000005.1_rPodUni1.pri 39 1,849,762,660 114 443,085 34.17
464 yellow-spotted Amazon River turtle (primary hap 2026) Podocnemis unifilis GCA_050000005.2_rPodUni1.pri 87 2,435,981,808 214 56,909 48.54
465 yellowpond turtle (Southern MM-2020 2021) Mauremys mutica GCF_020497125.1_ASM2049712v1 595 2,484,367,879 1,041 93,474,084 33.86
466 zebra shark (6-17 2022 Squalomix) Stegostoma tigrinum GCF_022316705.1_sSteFas1.1 1,266 2,771,866,316 87,372 171,787,940 32.94
467 zebra shark (hap1 2023 refseq) Stegostoma tigrinum GCF_030684315.1_sSteTig4.hap1 835 3,198,515,386 1,159 17,106,481 64.64
468 zebra shark (hap2 2023) Stegostoma tigrinum GCA_030684295.1_sSteTig4.hap2 933 3,603,936,669 1,203 12,512,178 59.53
469 Zimmermann's poison frog (aRanVar5hap2 2025) Ranitomeya variabilis GCA_051348885.1_aRanVar5.hap2 275 5,710,906,444 227 41,700 70.26
470 Zimmermann's poison frog (hap1 2025 genbank) Ranitomeya variabilis GCA_051348905.1_aRanVar5.hap1 287 5,645,607,495 209 38,800 70.06
471 Zimmermann's poison frog (hap1 2025 refseq) Ranitomeya variabilis GCF_051348905.1_aRanVar5.hap1 286 5,645,589,471 209 38,800 70.06
TOTALS:total assembly count 471 6,862,968 1,557,051,237,723 8,268,514 13,262,256,680  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 624 assemblies assembly stats track stats
Mammals 925 assemblies assembly stats track stats
Birds 584 assemblies assembly stats track stats
Fishes 733 assemblies assembly stats track stats
other vertebrates 471 assemblies assembly stats track stats
Invertebrates 1976 assemblies assembly stats track stats
Plants 458 assemblies assembly stats track stats
Fungi 4136 assemblies assembly stats track stats
Viruses 15117 assemblies assembly stats track stats
Archaea 2887 assemblies assembly stats track stats
Bacteria 23788 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5522 assemblies assembly stats track stats