Birds Genomes assembly hubs, assembly statistics

Assemblies from NCBI/Genbank/Refseq sources, subset of birds only.

See also: hub access, track statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser
scientific name
and data download
NCBI assembly sequence
count
genome size
nucleotides
gap
count
unknown bases
(gap size sum)
masking
percent
1 Abyssinian ground-hornbill (alternate hap 2019) Bucorvus abyssinicus GCA_009769595.1_bBucAby1.alt 3,527 1,024,138,499 0 0 18.52
2 Abyssinian ground-hornbill (primary hap 2019) Bucorvus abyssinicus GCA_009769605.1_bBucAby1.pri 112 1,132,597,561 204 8,074,542 19.24
3 acorn woodpecker (bairdi alternate hap 2022) Melanerpes formicivorus GCA_026170555.1_bMelFor1.0.a 2,294 1,438,781,011 1,555 155,500 43.03
4 acorn woodpecker (bairdi primary hap 2022 genbank) Melanerpes formicivorus GCA_026170545.1_bMelFor1.0.p 3,174 1,323,584,679 1,317 131,700 42.41
5 acorn woodpecker (bairdi primary hap 2022 refseq) Melanerpes formicivorus GCF_026170545.1_bMelFor1.0.p_v2 3,172 1,323,528,184 1,317 131,700 42.41
6 Adelie penguin Pygoscelis adeliae GCF_000699105.1_ASM69910v1 19,265 1,216,617,519 95,110 54,157,596 18.32
7 African harrier-hawk (primary hap 2026) Polyboroides typus GCA_060712505.1_bPolTyp1.1.rep 428 1,439,993,846 109 10,900 28.80
8 African ostrich Struthio camelus australis GCF_000698965.1_ASM69896v1 6,915 1,225,041,896 72,649 40,253,160 17.81
9 African ostrich (BGI_N308 2014) Struthio camelus australis GCA_000698965.1_ASM69896v1 6,914 1,225,025,301 72,649 40,253,160 17.80
10 African ostrich (hap1 2024) Struthio camelus GCF_040807025.1_bStrCam1.hap1 262 1,452,018,929 116 23,200 24.25
11 African ostrich (hap1 2024) Struthio camelus GCA_040807025.1_bStrCam1.hap1 263 1,452,035,523 116 23,200 24.25
12 African ostrich (hap2 2024) Struthio camelus GCA_040807015.1_bStrCam1.hap2 250 1,383,056,266 82 16,400 28.29
13 American crow Corvus brachyrhynchos GCF_000691975.1_ASM69197v1 10,547 1,091,312,783 79,099 39,530,922 18.46
14 American flamingo (alternate hap 2019) Phoenicopterus ruber ruber GCA_009819805.1_bPhoRub2.alt 3,529 1,167,509,893 0 0 20.15
15 American flamingo (primary hap 2019) Phoenicopterus ruber ruber GCA_009819775.1_bPhoRub2.pri 90 1,246,226,932 280 8,602,116 20.94
16 American goldfinch (hap1 2026) Spinus tristis GCA_057381415.1_bSpiTri1.hap1 287 1,346,967,714 456 247,562 32.47
17 American goldfinch (hap2 2026) Spinus tristis GCA_057381485.1_bSpiTri1.hap2 278 1,220,750,257 336 159,956 30.67
18 American kestrel (FMNH 100283 2023) Falco sparverius GCA_034782035.1_ASM3478203v1 14,961 1,241,682,339 492,459 181,034,698 15.59
19 American robin (hap1 2025) Turdus migratorius GCA_052324695.1_bTurMig1.hap1 421 1,303,638,384 334 61,400 29.76
20 American robin (hap2 2025) Turdus migratorius GCA_052324735.1_bTurMig1.hap2 584 1,250,593,877 268 50,300 32.48
21 Anna's hummingbird (alternate hap BGI_N300 2018) Calypte anna GCA_003957575.1_bCalAnn1_v1.h 3,803 952,083,371 6 2,998 20.33
22 Anna's hummingbird (BGI_N300 2019 refseq) Calypte anna GCF_003957555.1_bCalAnn1_v1.p 159 1,059,687,259 429 16,096,788 20.87
23 bald eagle Haliaeetus leucocephalus GCF_000737465.1_Haliaeetus_leucocephalus-4.0 1,023 1,178,409,481 30,862 19,163,137 18.49
24 band-tailed pigeon (hap1 2025) Patagioenas fasciata GCF_037038585.1_bPatFas1.hap1 360 1,454,324,034 137 2,831,076 33.99
25 band-tailed pigeon (v1 hap2 2024 refseq) Patagioenas fasciata GCF_036971685.1_bPatFas1.hap2 452 1,410,041,145 219 8,369,264 31.76
26 band-tailed pigeon (v2 hap2 2025) Patagioenas fasciata GCA_036971685.2_bPatFas1.hap2 441 1,198,742,887 64 4,620,040 27.42
27 bar-tailed trogon Apaloderma vittatum GCF_000703405.1_ASM70340v1 54,728 1,070,836,417 50,921 4,539,803 19.89
28 barn owl (U. Lausanne 2021) Tyto alba GCF_018691265.1_T.alba_DEE_v4.0 70 1,249,867,532 259 51,418,967 19.01
29 Barn swallow (bHirRus1 v3 alternate hap 2021) Hirundo rustica GCA_015227815.3_bHirRus1.alt.v3 2,476 936,032,861 6 1,226 20.47
30 barn swallow (v3 primary hap 2021 refseq) Hirundo rustica GCF_015227805.2_bHirRus1.pri.v3 617 1,105,955,550 1,102 25,534,411 21.06
31 barnacle goose (hap1.1 2025) Branta leucopsis GCA_965642265.1_bBraLeu2.hap1.1 693 1,346,867,785 425 85,000 30.99
32 Bengalese finch Lonchura striata GCF_005870125.1_lonStrDom2 2,015 1,060,269,806 37,862 31,260,240 20.10
33 Bengalese finch (primary hap 2025) Lonchura striata GCA_050655825.1_ASM5065582v1 41 1,306,137,203 5 500 30.58
34 bird A.albertisi (hap1 2024) Aegotheles albertisi GCA_039906565.1_bAegAlb1.hap1 592 1,167,497,019 439 87,800 21.86
35 bird A.albertisi (hap2 2024) Aegotheles albertisi GCA_039906465.1_bAegAlb1.hap2 525 1,051,698,180 344 68,800 21.38
36 bird A.imberbis (Cuckoo-Finch-1a 21T00152 2023) Anomalospiza imberbis GCF_031753505.1_ASM3175350v1 1,370 1,198,243,876 431 86,009 25.10
37 bird E.chinensis (hap1 2024) Excalfactoria chinensis GCA_039878515.1_bCotChi1.hap1 425 974,517,173 331 63,200 20.66
38 bird E.chinensis (hap2 2024) Excalfactoria chinensis GCA_039878825.1_bCotChi1.hap2 191 966,847,183 330 63,200 20.52
39 bird P.flaviventris (CSIRO_AGI_PZ_B2104156 2023) Pezoporus flaviventris GCF_033815535.1_CSIRO_AGI_Pfla_v1 993 1,263,767,824 0 0 27.27
40 bird Z.leucophrys gambelii (GWCS_2022_RI 2023) Zonotrichia leucophrys gambelii GCF_028769735.1_RI_Zleu_2.0 3,792 1,123,996,003 339 26,361 23.36
41 black swan (v2 Queensland, Australia AKBS03 2022) Cygnus atratus GCF_013377495.2_CAtr_DNAZoo_HiC_assembly 568 1,124,233,768 130 65,000 21.50
42 black-capped chickadee (hap1 2023 genbank) Poecile atricapillus GCA_030490865.1_bPoeAtr1.hap1 306 1,251,116,877 402 958,925 24.42
43 black-capped chickadee (hap1 2023 refseq) Poecile atricapillus GCF_030490865.1_bPoeAtr1.hap1 307 1,251,133,642 404 958,949 24.42
44 black-capped chickadee (hap2 2023) Poecile atricapillus GCA_030490855.1_bPoeAtr1.hap2 157 987,998,379 240 590,213 23.49
45 black-headed gull (alternate hap 2024) Chroicocephalus ridibundus GCA_963924255.1_bChrRid1.1_alternate_haplotype 2,754 1,350,722,057 0 0 28.61
46 black-headed gull (Kunming 2023) Chroicocephalus ridibundus GCA_030820635.1_KIZ_Lrid_1.0 297 1,243,762,172 149 14,900 23.13
47 black-headed gull (primary hap 2024 genbank) Chroicocephalus ridibundus GCA_963924245.1_bChrRid1.1 729 1,417,571,123 462 92,400 31.33
48 black-headed gull (primary hap 2024 refseq) Chroicocephalus ridibundus GCF_963924245.1_bChrRid1.1 728 1,417,554,307 462 92,400 31.33
49 black-legged kittiwake (bRisTri1 2023 refseq) Rissa tridactyla GCF_028500815.1_bRisTri1.patW.cur.20221130 716 1,353,621,101 283 786,373 26.72
50 black-legged kittiwake (bRisTri1.mat 2023) Rissa tridactyla GCA_028501385.1_bRisTri1.mat.cur.20221130 733 1,268,441,171 223 639,872 27.28
51 black-throated flowerpiercer Diglossa brunneiventris GCA_019023105.1_LSU_DiBr_2.0 600 1,079,473,785 970 85,047 20.78
52 blackcap (alternate hap 2019) Sylvia atricapilla GCA_009819715.1_bSylAtr1.alt 3,566 991,486,332 2 600 19.69
53 blackcap (primary hap 2019 refseq) Sylvia atricapilla GCF_009819655.1_bSylAtr1.pri 190 1,066,804,524 413 11,925,354 19.80
54 blue jay (hap1 2024) Cyanocitta cristata GCA_046129655.1_bCyaCrs1.hap1 316 1,227,176,437 393 74,300 25.18
55 blue jay (hap2 2024) Cyanocitta cristata GCA_046129645.1_bCyaCrs1.hap2 309 1,195,662,530 333 64,300 29.11
56 blue tit Cyanistes caeruleus GCF_002901205.1_cyaCae2 29,297 1,186,980,630 24,797 88,067,852 18.90
57 blue tit (hap1.1 2025 genbank) Cyanistes caeruleus GCA_971803275.1_bCyaCae1.hap1.1 456 1,220,473,014 476 95,215 27.31
58 blue tit (hap1.1 2025 refseq) Cyanistes caeruleus GCF_971803275.1_bCyaCae1.hap1.1 455 1,220,456,237 476 95,215 27.31
59 blue tit (hap2.1 2025) Cyanistes caeruleus GCA_971808865.1_bCyaCae1.hap2.1 382 1,229,107,639 514 102,800 28.01
60 blue-and-yellow macaw (hap1 2023) Ara ararauna GCA_028858755.1_bAraAra1.hap1 246 1,224,360,198 107 988,129 24.87
61 blue-and-yellow macaw (hap2 2023) Ara ararauna GCA_028858555.1_bAraAra1.hap2 274 1,302,242,811 130 1,106,509 28.73
62 blue-crowned manakin Lepidothrix coronata GCF_001604755.1_Lepidothrix_coronata-1.0 4,612 1,079,577,334 22,456 22,384,553 19.20
63 blue-fronted amazon (AMXYW 2021) Amazona aestiva GCA_017639355.1_Aaes_hic 1,498 1,130,393,257 3,560,856 78,205,203 17.92
64 blue-fronted amazon (FVVF132 2015) Amazona aestiva GCA_001420675.1_ASM142067v1 3,232 1,129,535,839 3,559,082 77,331,237 17.93
65 blue-mantled thornbill (YG032_03hap1 2025) Chalcostigma stanleyi GCA_054051245.1_bChaSta1.hap1 404 1,023,147,913 1,760 176,000 20.81
66 blue-mantled thornbill (YG032_03hap2 2025) Chalcostigma stanleyi GCA_054051235.1_bChaSta1.hap2 610 1,042,267,249 1,762 176,200 21.43
67 Bourke's parrot (Australia Nb327-2 2023) Neopsephotus bourkii GCF_033783945.1_CSIRO-AGI_Nbou_v1 1,827 1,122,590,461 37 3,308 20.93
68 Brazilian merganser (hap1 2024) Mergus octosetaceus GCA_036873955.1_bMerOct1.hap1 569 1,245,791,205 327 56,959 28.52
69 Brazilian merganser (hap2 2024) Mergus octosetaceus GCA_036850655.1_bMerOct1.hap2 720 1,213,885,900 244 42,259 31.82
70 bronzed cowbird (106 2024) Molothrus aeneus GCF_037042795.1_BPBGC_Maene_1.0 528 1,177,188,543 67 13,400 26.12
71 brown eared-pheasant Crossoptilon mantchuricum GCA_019593555.1_cma1 2,408 1,013,441,081 114,232 13,649,759 20.28
72 brown headed cowbird (v1.1 BHLD 08-10-18 2022) Molothrus ater GCF_012460135.2_BPBGC_Mater_1.1 374 1,087,236,743 318 63,400 21.32
73 brown kiwi Apteryx mantelli mantelli GCF_001039765.1_AptMant0 24,718 1,523,969,783 368,297 212,971,013 14.69
74 brown roatelo Mesitornis unicolor GCF_000695765.1_ASM69576v1 67,520 1,087,290,853 51,602 3,812,826 19.42
75 brown-headed cowbird (hap1 2026) Molothrus ater GCA_057560355.1_bMolAte1.hap1 2,251 1,332,292,990 327 57,600 29.91
76 brown-headed cowbird (hap2 2026) Molothrus ater GCA_057657745.1_bMolAte1.hap2 1,866 1,150,339,399 158 28,900 27.90
77 budgerigar (maternal 2020) Melopsittacus undulatus GCA_012275265.1_bMelUnd1.mat 930 1,169,393,027 388 67,787,495 20.82
78 budgerigar (maternal Z 2020 refseq) Melopsittacus undulatus GCF_012275295.1_bMelUnd1.mat.Z 864 1,171,617,451 284 3,236,129 22.13
79 budgerigar (paternal hap 2020) Melopsittacus undulatus GCA_012275275.1_bMelUnd1.pat 330 1,124,753,724 737 11,458,836 20.35
80 budgerigar (v6.3 2021 WashU) Melopsittacus undulatus GCF_000238935.1_Melopsittacus_undulatus_6.3 25,212 1,117,373,619 51,022 30,758,804 19.08
81 burrowing owl Athene cunicularia GCF_003259725.1_athCun1 445 1,157,069,330 33,737 12,642,846 19.37
82 California black rail (168171201 alternate hap 2022) Laterallus jamaicensis coturniculus GCA_022605925.1_bLatJam1.0.a 3,563 1,211,372,722 1,672 167,200 30.43
83 California black rail (168171201 primary hap 2022) Laterallus jamaicensis coturniculus GCA_022605575.1_bLatJam1.0.p 645 1,391,405,863 319 31,910 32.29
84 California condor (v2 813 2022 refseq) Gymnogyps californianus GCF_018139145.2_ASM1813914v2 542 1,240,248,578 632 316,000 20.33
85 California quail (MVZ:Bird:193975 alternate hap 2022) Callipepla californica brunnescens GCA_023055725.1_bCalCai1.0.a 1,601 1,398,480,580 248 24,800 36.96
86 California quail (MVZ:Bird:193975 primary hap 2022) Callipepla californica brunnescens GCA_023055505.1_bCalCai1.0.p 321 1,085,347,722 287 28,700 25.37
87 California towhee (CALT 2023) Melozone crissalis GCF_028551555.1_PUWL_Pcris_2 627 1,412,182,309 0 0 32.92
88 Canada goose (alternate hap 2025) Branta canadensis GCA_965231325.1_bBraCan1.1_alternate_haplotype 4,425 1,257,950,233 0 0 25.36
89 Canada goose (primary hap 2025 genbank) Branta canadensis GCA_965231335.1_bBraCan1.1 614 1,311,899,232 531 106,200 29.89
90 Canada goose (primary hap 2025 refseq) Branta canadensis GCF_965231335.1_bBraCan1.1 613 1,311,882,472 531 106,200 29.89
91 Canada goose (SJ_97 2019) Branta canadensis GCA_006130075.1_GSC_cangoose_1.0 14,079 1,151,349,954 15,389 18,827,118 21.30
92 carmine bee-eater (alternate hap 2019) Merops nubicus GCA_009819585.1_bMerNub1.alt 3,296 1,122,486,764 0 0 21.54
93 carmine bee-eater (primary hap 2019) Merops nubicus GCA_009819595.1_bMerNub1.pri 109 1,149,356,202 269 6,055,062 21.59
94 chaffinch (alternate hap 2023) Fringilla coelebs GCA_963513985.1_bFriCoe1.1_alternate_haplotype 2,178 1,168,325,350 0 0 26.32
95 chaffinch (primary hap 2023) Fringilla coelebs GCA_963513975.1_bFriCoe1.1 460 1,209,243,761 573 114,600 28.43
96 chestnut-breasted malkoha (KB17595 2023) Phaenicophaeus curvirostris GCF_032191515.1_BPBGC_Pcur_1.0 587 1,315,410,253 181 36,200 29.93
97 chicken (Cobb bGalGal5 alternate hap 2022) Gallus gallus GCA_027408205.1_bGalGal5.alt 2,259 911,865,540 4 92 21.83
98 chicken (Cobb bGalGal5 primary hap 2022) Gallus gallus GCA_027408225.1_bGalGal5.pri 252 1,109,044,877 460 2,157,079 24.72
99 chicken (GRCg6a 2018) Gallus gallus GCF_000002315.6_GRCg6a 464 1,065,365,434 952 9,784,466 21.22
100 chicken (Huxu 2023) Gallus gallus GCA_024206055.2_GGswu 41 1,100,928,095 14 5,572 23.58
101 chicken (Ross bGalGal4 alternate hap 2022) Gallus gallus GCA_027408255.1_bGalGal4.alt 2,683 885,772,923 1 13 21.48
102 chicken (Ross bGalGal4 primary hap 2023) Gallus gallus GCA_027557775.1_bGalGal4.pri 246 1,094,281,734 566 2,821,884 24.04
103 chicken (Silkie 2023) Gallus gallus GCA_034509865.1_ASM3450986v1 1,100 1,123,247,173 0 0 24.87
104 chicken (Wuding W17 2024) Gallus gallus GCA_030914275.2_ASM3091427v2 127 1,025,968,684 311 90,694 20.78
105 chicken white leghorn layer X broiler (v2 broiler haplotype 2021 2021) Gallus gallus GCF_016699485.2_bGalGal1.mat.broiler.GRCg7b 214 1,053,332,251 463 3,383,918 21.35
106 Chilean tinamou Nothoprocta perdicaria GCF_003342845.1_notPer1 2,217 965,904,370 1,226,739 13,445,596 19.59
107 chimney swift (M959 v1.1 2014) Chaetura pelagica GCF_000747805.2_ChaPel_1.1 18,703 1,118,724,105 65,471 44,958,635 19.72
108 chipping sparrow (hap1 2026) Spizella passerina GCA_056783625.1_bSpiPas1.hap1 261 1,352,214,437 582 4,892,768 30.54
109 chuck-will's-widow (BGI_N321 v2 2014) Antrostomus carolinensis GCF_000700745.2_ASM70074v2 68,881 1,118,829,799 56,333 4,349,714 20.50
110 cinnamon-breated bunting (alternate hap 2026) Emberiza tahapisi GCA_058130105.1_bFriTah1.1.alt 460 1,133,902,352 507 50,700 25.07
111 cinnamon-breated bunting (primary hap 2026) Emberiza tahapisi GCA_058130095.1_bFriTah1.1.rep 644 1,291,141,748 621 62,100 26.32
112 Clark's Grebe (alternate hap 2026) Aechmophorus clarkii GCA_054644135.1_bAecCla1.alt 511 1,302,899,237 457 45,700 28.83
113 Clark's Grebe (primary hap 2026) Aechmophorus clarkii GCA_054644155.1_bAecCla1.pri 1,041 1,671,523,603 530 53,000 38.56
114 collared flycatcher Ficedula albicollis GCF_000247815.1_FicAlb1.5 21,428 1,118,343,587 11,403 16,019,705 23.69
115 common buzzard (bButBut1.hap1.1 2024 refseq) Buteo buteo GCF_964188355.1_bButBut1.hap1.1 543 1,303,682,556 471 94,200 23.96
116 common buzzard (bButBut1.hap2.1 2024) Buteo buteo GCA_964188375.1_bButBut1.hap2.1 458 1,330,554,072 471 94,200 25.08
117 common canary (domestic yellow sc_yellow_7_cibi 2019) Serinus canaria GCF_007115625.1_cibio_Scana_2019 3,536 1,071,655,231 47,138 19,392,432 19.62
118 common canary (maternal hap 2026) Serinus canaria GCA_055764355.1_bSerCaa1.mat 300 1,421,936,890 327 28,998,239 35.64
119 common canary (serCan28SL12 2022) Serinus canaria GCF_022539315.1_serCan2020 685 1,050,352,878 1,055 527,001 20.52
120 common chaffinch (primary hap 2023) Fringilla coelebs GCF_963513975.1_bFriCoe1.1 459 1,209,226,962 573 114,600 28.43
121 common cuckoo (bCucCan1 alternate hap 2021) Cuculus canorus GCA_017976305.1_bCucCan1.alt 1,004 1,063,845,602 8 1,739 21.42
122 common cuckoo (bCucCan1 primary hap 2021 refseq) Cuculus canorus GCF_017976375.1_bCucCan1.pri 150 1,180,136,575 296 4,922,315 21.81
123 common goldeneye (alternate hap 2024) Bucephala clangula GCA_964059605.1_bBucCla1.1_alternate_haplotype 4,146 965,992,559 0 0 27.49
124 common goldeneye (primary hap 2024 genbank) Bucephala clangula GCA_964059595.1_bBucCla1.1 538 1,190,938,797 454 90,625 25.01
125 common goldeneye (primary hap 2024 refseq) Bucephala clangula GCF_964059595.1_bBucCla1.1 538 1,190,938,797 454 90,625 25.01
126 common kestrel (hap1.1 2025) Falco tinnunculus GCA_976974455.1_bFalTin1.hap1.1 507 1,417,242,954 496 99,221 27.02
127 common kestrel (hap2.1 2025) Falco tinnunculus GCA_976974655.1_bFalTin1.hap2.1 447 1,201,163,297 383 76,600 22.17
128 common moorhen (bGalChl1.hap1.1 2024) Gallinula chloropus GCA_964237585.1_bGalChl1.hap1.1 818 1,282,411,533 603 120,600 25.71
129 common moorhen (bGalChl1.hap2.1 2024) Gallinula chloropus GCA_964237395.1_bGalChl1.hap2.1 395 1,208,559,276 536 107,200 22.35
130 common moorhen (hap1.1 2024) Gallinula chloropus GCF_964237585.1_bGalChl1.hap1.1 817 1,282,394,494 603 120,600 25.71
131 common myna (bArcTri1 alternate hap 2023) Acridotheres tristis GCA_027559525.1_bAcrTri1.alt 2,221 969,356,965 1 500 25.11
132 common myna (bArcTri1 primary hap 2023) Acridotheres tristis GCA_027559615.1_bAcrTri1.pri 455 1,193,419,045 435 2,422,523 28.14
133 common pochard (bAytFer1.hap1.1 2024) Aythya ferina GCA_964211825.1_bAytFer1.hap1.1 862 1,252,319,576 474 94,800 27.88
134 common pochard (bAytFer1.hap2.1 2024) Aythya ferina GCA_964211795.1_bAytFer1.hap2.1 362 1,103,588,439 405 81,000 25.38
135 common pochard (hap1.1 2024) Aythya ferina GCF_964211825.1_bAytFer1.hap1.1 861 1,252,302,973 474 94,800 27.88
136 common redpoll (hap1.1 2026) Acanthis flammea GCA_987194025.1_bAcaFla1.hap1.1 70 1,246,358,417 32 4,000 27.50
137 common redshank (hap1.1 2026) Tringa totanus GCA_986271405.1_bTriTot1.hap1.1 941 1,311,072,894 693 138,600 26.07
138 common redshank (hap2.1 2026) Tringa totanus GCA_986271475.1_bTriTot1.hap2.1 586 1,184,397,750 581 116,200 25.77
139 common starling Sturnus vulgaris GCF_001447265.1_Sturnus_vulgaris-1.0 2,361 1,036,755,994 23,392 23,939,528 19.54
140 common starling (hap1 2025 genbank) Sturnus vulgaris GCA_052056855.1_bStuVul1.hap1 1,011 1,357,016,380 287 21,044,965 33.47
141 common starling (hap1 2025 refseq) Sturnus vulgaris GCF_052056855.1_bStuVul1.hap1 1,012 1,357,033,173 287 21,044,965 33.47
142 common starling (hap2 2025) Sturnus vulgaris GCA_052056845.1_bStuVul1.hap2 367 1,098,594,187 209 31,038,039 24.72
143 common swift (bApuApu2 alternate hap 2021) Apus apus GCA_020740585.1_bApuApu2.alt.cur 1,697 1,019,504,970 5 105 20.89
144 common swift (primary hap 2021 refseq) Apus apus GCF_020740795.1_bApuApu2.pri.cur 110 1,100,378,261 256 1,747,529 21.21
145 common tern (alternate hap 2019) Sterna hirundo GCA_009819645.1_bSteHir1.alt 2,235 1,175,438,911 0 0 20.72
146 common tern (primary hap 2019) Sterna hirundo GCA_009819605.1_bSteHir1.pri 123 1,229,972,541 205 10,364,610 21.00
147 Common tern (primary hap 2026) Sterna hirundo GCA_009819605.2_bSteHir1.pri 122 1,229,930,717 205 10,364,610 21.00
148 common whooper (hap1.1 2025) Cygnus cygnus GCA_965278775.1_bCygCyg1.hap1.1 2,057 1,387,585,141 737 147,400 33.96
149 common whooper (hap2.1 2025) Cygnus cygnus GCA_965278735.1_bCygCyg1.hap2.1 1,430 1,123,089,254 606 121,200 25.96
150 common wood pigeon (alternate hap 2025) Columba palumbus GCA_965250405.1_bColPal1.1_alternate_haplotype 6,510 1,822,355,929 0 0 49.71
151 common wood pigeon (primary hap 2025) Columba palumbus GCA_965250375.1_bColPal1.1 719 1,362,519,831 541 108,200 32.69
152 common yellowthroat (alternate hap 2019) Geothlypis trichas GCA_009764545.1_bGeoTri1.alt 4,976 976,433,058 1 32 19.80
153 common yellowthroat (primary hap 2019) Geothlypis trichas GCA_009764595.1_bGeoTri1.pri 278 1,078,128,490 1,479 13,697,790 20.48
154 corn crake (hap1.1 2026) Crex crex GCA_987197635.1_bCreCre1.hap1.1 44 1,295,640,924 11 2,036 27.54
155 Cory's shearwater (hap1.2 2024 genbank) Calonectris borealis GCA_964195595.2_bCalBor7.hap1.2 355 1,366,205,003 525 105,015 24.91
156 Cory's shearwater (hap1.2 2024 refseq) Calonectris borealis GCF_964195595.1_bCalBor7.hap1.2 354 1,366,185,058 525 105,015 24.91
157 Cory's shearwater (hap2.2 2024) Calonectris borealis GCA_964196065.2_bCalBor7.hap2.2 281 1,211,470,109 478 95,600 23.68
158 crested eagle (hap1 2024) Morphnus guianensis GCA_045345505.1_bMorGui1_haplotype_1 548 1,316,595,704 105 21,000 28.17
159 crested eagle (hap2 2024) Morphnus guianensis GCA_045345515.1_bMorGui1_haplotype_2 544 1,576,624,229 164 32,800 33.65
160 crested ibis (BGI_Y956 2014) Nipponia nippon GCF_000708225.1_ASM70822v1 59,555 1,223,863,029 70,475 34,415,453 18.70
161 cuckoo roller (BGI_N330 2014) Leptosomus discolor GCF_000691785.1_ASM69178v1 57,160 1,136,244,952 56,010 3,108,826 18.48
162 cuckoo roller (bLepDis1hap2 2023) Leptosomus discolor GCF_034619465.1_bLepDis1.hap2 277 1,332,028,070 271 54,200 25.12
163 cuckoo roller (hap1 2023) Leptosomus discolor GCA_034619455.1_bLepDis1.hap1 335 1,327,905,210 290 58,000 24.00
164 cuckoo roller (hap2 2023) Leptosomus discolor GCA_034619465.1_bLepDis1.hap2 278 1,332,047,658 271 54,200 25.12
165 Dalmatian pelican (alternate hap 2023) Pelecanus crispus GCA_030449815.1_bPelCri1.alt 7,284 1,207,417,857 0 0 23.23
166 Dalmatian pelican (BGI_N334 2014) Pelecanus crispus GCF_000687375.1_ASM68737v1 63,982 1,160,924,693 57,580 4,215,933 19.54
167 Dalmatian pelican (primary hap 2023 genbank) Pelecanus crispus GCA_030463565.1_bPelCri1.pri 311 1,314,587,946 390 78,000 24.65
168 Dalmatian pelican (primary hap 2023 refseq) Pelecanus crispus GCF_030463565.1_bPelCri1.pri 310 1,314,568,463 390 78,000 24.65
169 Domestic goose (bAnsAns1.hap1.1 2024) Anser anser GCA_964211835.1_bAnsAns1.hap1.1 819 1,313,455,045 930 186,000 28.50
170 Domestic goose (bAnsAns1.hap2.1 2024) Anser anser GCA_964211785.1_bAnsAns1.hap2.1 381 1,168,290,161 754 150,800 26.78
171 domestic goose (hap1.1 2024) Anser anser GCF_964211835.1_bAnsAns1.hap1.1 818 1,313,438,308 930 186,000 28.50
172 Downy woodpecker (alternate hap 2020) Dryobates pubescens GCA_014839825.1_bDryPub1.alt 1,342 1,082,594,729 4 226 31.30
173 downy woodpecker (primary hap 2020) Dryobates pubescens GCF_014839835.1_bDryPub1.pri 180 1,187,939,694 187 4,003,130 32.06
174 dusky-headed brushfinch (hap1 2026) Atlapetes fuscoolivaceus GCA_060712285.1_bAtlFus2.hap1 324 1,385,572,189 319 59,400 33.98
175 East African grey crowned-crane Balearica regulorum gibbericeps GCF_000709895.1_ASM70989v1 53,491 1,127,622,302 58,359 4,094,603 18.87
176 East African grey crowned-crane (alternate hap 2020) Balearica regulorum gibbericeps GCA_011004865.1_bBalReg1.alt 971 1,042,364,165 4 539 20.18
177 East African grey crowned-crane (primary hap 2020 genbank) Balearica regulorum gibbericeps GCA_011004875.1_bBalReg1.pri 105 1,221,051,782 144 4,796,037 21.20
178 East African grey crowned-crane (primary hap 2020 refseq) Balearica regulorum gibbericeps GCF_011004875.1_bBalReg1.pri 105 1,221,049,350 144 4,796,037 21.20
179 Eastern black-eared wheatear (GR-GAL-2019-014 2023 genbank) Oenanthe melanoleuca GCA_029582105.1_OMel1.0 588 1,036,273,591 582 58,200 20.82
180 Eastern black-eared wheatear (GR-GAL-2019-014 2023 refseq) Oenanthe melanoleuca GCF_029582105.1_OMel1.0 587 1,036,256,795 582 58,200 20.82
181 Eastern phoebe (bSayPho3hap1 2026) Sayornis phoebe GCA_055470965.1_bSayPho3.hap1 261 1,175,684,694 210 40,700 24.56
182 Egyptian goose (hap1.1 2025) Alopochen aegyptiaca GCA_965278175.1_bAloAeg2.hap1.1 540 1,272,248,091 399 79,800 28.59
183 Egyptian goose (hap2.1 2025) Alopochen aegyptiaca GCA_965278125.1_bAloAeg2.hap2.1 595 1,105,780,382 347 69,225 25.47
184 elegant crested-tinamou (YG026_01 alternate hap 2025) Eudromia elegans GCA_047922975.1_bEudEle1_v1.hap2 359 965,723,864 184 25,600 23.99
185 elegant crested-tinamou (YG026_01 primary hap 2025) Eudromia elegans GCA_047922985.1_bEudEle1_v1.hap1 397 1,109,691,113 299 43,700 25.42
186 emperor penguin Aptenodytes forsteri GCF_000699145.1_ASM69914v1 10,672 1,254,347,440 72,501 71,806,784 17.97
187 emu (2018) Dromaius novaehollandiae GCF_003342905.1_droNov1 2,778 1,192,254,075 1,408,082 13,197,674 17.61
188 emu (hap1 2024 genbank) Dromaius novaehollandiae GCA_036370855.1_bDroNov1.hap1 272 1,468,722,890 129 25,800 24.07
189 emu (hap1 2024 refseq) Dromaius novaehollandiae GCF_036370855.1_bDroNov1.hap1 271 1,468,706,110 129 25,800 24.07
190 emu (hap2 2024) Dromaius novaehollandiae GCA_036417515.1_bDroNov1.hap2 238 1,359,162,908 101 20,200 26.97
191 emu (v2 ZJU1.0 2023) Dromaius novaehollandiae GCA_016128335.2_ZJU2.0 767 1,247,435,561 539 72,443 19.18
192 Eurasian collared-dove (hap1.1 2024 genbank) Streptopelia decaocto GCA_964273445.1_bStrDea1.hap1.1 2,451 1,290,957,608 696 139,200 30.01
193 Eurasian collared-dove (hap1.1 2024 refseq) Streptopelia decaocto GCF_964273445.1_bStrDea1.hap1.1 2,450 1,290,939,990 696 139,200 30.01
194 Eurasian collared-dove (hap2.1 2024) Streptopelia decaocto GCA_964273585.1_bStrDea1.hap2.1 584 1,200,501,445 683 136,600 25.49
195 Eurasian crane (hap1 2024) Grus grus GCA_964106855.1_bGruGru1.hap1.1 754 1,352,282,554 593 118,600 26.80
196 Eurasian crane (hap1.1 2024) Grus grus GCF_964106855.1_bGruGru1.hap1.1 753 1,352,263,658 593 118,600 26.80
197 Eurasian crane (hap2.1 2024) Grus grus GCA_964059345.1_bGruGru1.hap2.1 326 1,291,076,428 559 111,800 24.03
198 Eurasian curlew (bNumArq3.hap1.1 2024) Numenius arquata GCF_964106895.1_bNumArq3.hap1.1 1,818 1,348,859,203 785 157,000 28.37
199 Eurasian curlew (hap1 2024) Numenius arquata GCA_964106895.1_bNumArq3.hap1.1 1,819 1,348,876,333 785 157,000 28.37
200 Eurasian curlew (hap2 2024) Numenius arquata GCA_964059295.1_bNumArq3.hap2.1 811 1,198,356,613 693 138,600 24.54
201 Eurasian goshawk (v2 primary hap 2022 genbank) Astur gentilis GCA_929443795.2_bAccGen1.2 455 1,398,030,142 183 36,600 27.31
202 Eurasian goshawk (v2 primary hap 2022 refseq) Astur gentilis GCF_929443795.2_bAccGen1.2 454 1,398,011,397 183 36,600 27.31
203 Eurasian nightjar (alternate hap 2021) Caprimulgus europaeus GCA_907165095.1_bCapEur3.1_alternate_haplotype 2,502 1,051,868,380 25 3,300 21.18
204 Eurasian nightjar (primary hap 2021 genbank) Caprimulgus europaeus GCA_907165065.1_bCapEur3.1 121 1,177,791,212 153 25,835 22.20
205 Eurasian nightjar (primary hap 2021 refseq) Caprimulgus europaeus GCF_907165065.1_bCapEur3.1 121 1,177,791,212 153 25,835 22.20
206 Eurasian oystercatcher (hap1.1 2025) Haematopus ostralegus GCA_976988815.1_bHaeOst1.hap1.1 319 1,306,016,092 457 91,414 24.18
207 Eurasian oystercatcher (hap2.1 2025) Haematopus ostralegus GCA_976988755.1_bHaeOst1.hap2.1 364 1,290,388,642 448 89,600 23.24
208 Eurasian siskin (hap1.1 2026) Spinus spinus GCA_987197695.1_bSpiSpi3.hap1.1 52 1,228,642,284 8 1,600 25.66
209 Eurasian skylark (hap1.1 2026) Alauda arvensis GCA_987194035.1_bAlaArv1.hap1.1 44 1,115,104,865 6 1,100 23.34
210 Eurasian sparrowhawk (hap1.1 2026) Accipiter nisus GCA_978019825.1_bAccNis1.hap1.1 764 1,439,946,477 550 110,000 28.24
211 Eurasian sparrowhawk (hap2.1 2026) Accipiter nisus GCA_978019815.1_bAccNis1.hap2.1 469 1,231,573,886 432 86,414 24.40
212 Eurasian spoonbill (hap1.1 2025 genbank) Platalea leucorodia GCA_965183815.1_bPlaLeu2.hap1.1 669 1,345,843,103 703 140,600 23.28
213 Eurasian spoonbill (hap1.1 2025 refseq) Platalea leucorodia GCF_965183815.1_bPlaLeu2.hap1.1 668 1,345,825,956 703 140,600 23.28
214 Eurasian spoonbill (hap2.1 2025) Platalea leucorodia GCA_965183785.1_bPlaLeu2.hap2.1 408 1,190,439,839 604 120,800 22.31
215 Eurasian tree sparrow Passer montanus GCF_014805655.1_ASM1480565v1 18,975 1,039,966,254 4,765 1,888,875 20.56
216 European golden plover (primary hap 2021) Pluvialis apricaria GCA_017639485.1_bPluApr1.pri 107 1,247,767,512 268 12,294,737 21.20
217 European greenfinch (hap1.1 2026) Chloris chloris GCA_987196555.1_bChlChl3.hap1.1 58 1,211,672,466 1 200 26.05
218 European robin (alternate hap 2021) Erithacus rubecula GCA_903797565.2_bEriRub2.2_alternate_haplotype 3,668 912,720,829 18 4,600 19.76
219 European robin (primary hap 2021 genbank) Erithacus rubecula GCA_903797595.2_bEriRub2.2 1,119 1,086,738,418 990 287,644 21.47
220 European robin (primary hap 2021 refseq) Erithacus rubecula GCF_903797595.1_bEriRub2.2 1,119 1,086,738,418 990 287,644 21.47
221 European shag (alternate hap 2023) Phalacrocorax aristotelis GCA_949628205.1_bGulAri2.1_alternate_haplotype 9,751 1,080,507,657 1 17 21.58
222 European shag (primary hap 2023 genbank) Phalacrocorax aristotelis GCA_949628215.1_bGulAri2.1 353 1,279,134,750 222 44,217 22.81
223 European shag (primary hap 2023 refseq) Phalacrocorax aristotelis GCF_949628215.1_bGulAri2.1 352 1,279,116,138 222 44,217 22.81
224 European turtle dove (v1.2 2021) Streptopelia turtur GCA_901699155.2_bStrTur1.2 311 1,178,816,852 940 3,880,574 21.07
225 European turtle dove (v1.2 alternate hap 2021) Streptopelia turtur GCA_901699165.2_bStrTur1.2_alternate_haplotype 3,334 1,035,330,184 0 0 20.26
226 Eurpoean golden plover (bPluApr1 alternate hap 2021) Pluvialis apricaria GCA_017639475.1_bPluApr1.alt 1,147 1,085,787,090 5 552 20.74
227 gadwall (hap1.1 2025) Mareca strepera GCA_965278785.1_bMarStr1.hap1.1 1,156 1,300,614,387 849 169,800 28.05
228 gadwall (hap2.1 2025) Mareca strepera GCA_965278795.1_bMarStr1.hap2.1 662 1,132,812,206 717 143,400 24.76
229 garden warbler (bSylBor1 alternate hap 2020) Sylvia borin GCA_014839765.1_bSylBor1.alt 775 1,032,649,170 0 0 19.91
230 garden warbler (primary hap 2020) Sylvia borin GCA_014839755.1_bSylBor1.pri 176 1,045,652,180 134 1,835,448 20.28
231 glaucous gull (hap1.1 2025) Larus hyperboreus GCA_965654215.1_bLarHyp1.hap1.1 2,662 1,458,820,168 781 156,200 31.52
232 glaucous gull (hap2.1 2025) Larus hyperboreus GCA_965654415.1_bLarHyp1.hap2.1 1,707 1,222,596,547 625 125,000 26.15
233 glaucous-winged gull (hap1.1 2025) Larus glaucescens GCA_965654385.1_bLarGla1.hap1.1 666 1,446,603,370 573 114,600 31.24
234 glaucous-winged gull (hap2.1 2025) Larus glaucescens GCA_965654465.1_bLarGla1.hap2.1 507 1,225,395,165 507 101,400 26.77
235 golden eagle (primary hap 2021) Aquila chrysaetos chrysaetos GCA_900496995.4_bAquChr1.4 145 1,233,723,095 228 5,201,260 20.02
236 golden eagle (v1.4 2021) Aquila chrysaetos chrysaetos GCF_900496995.4_bAquChr1.4 144 1,233,704,830 228 5,201,260 20.02
237 golden eagle (v1.4 alternate hap 2021) Aquila chrysaetos chrysaetos GCA_902153765.2_bAquChr1.4_alternate_haplotype 3,855 792,810,001 2 57 18.35
238 golden parakeet (hap1 2024) Guaruba guarouba GCA_045345405.1_bGuaGua1_haplotype_1 216 1,366,127,126 173 34,600 30.90
239 golden parakeet (hap2 2024) Guaruba guarouba GCA_045519325.1_bGuaGua1_haplotype_2 267 1,190,219,310 132 26,400 29.43
240 golden pheasant Chrysolophus pictus GCA_003413605.1_Chrysolophus_pictus_GenomeV1.0 14,294 1,023,990,748 51,170 25,281,723 20.04
241 golden-collared manakin Manacus vitellinus GCF_001715985.3_ASM171598v3 3,619 1,072,328,541 20,874 27,517,864 18.53
242 golden-fronted redstart (hap1 2026) Myioborus ornatus GCA_057814835.1_bMyiOra2.hap1 93 1,313,488,828 114 19,000 29.22
243 golden-fronted redstart (hap2 2026) Myioborus ornatus GCA_057814795.1_bMyiOra2.hap2 71 1,194,705,315 108 18,000 29.11
244 great black-backed gull (hap1.1 2025) Larus marinus GCA_965649785.1_bLarMar3.hap1.1 344 1,427,230,469 540 108,000 29.88
245 great black-backed gull (hap2.1 2025) Larus marinus GCA_965649815.1_bLarMar3.hap2.1 351 1,239,846,396 467 93,415 27.23
246 great cormorant (alternate hap 2024) Phalacrocorax carbo GCA_963921815.1_bPhaCar2.1_alternate_haplotype 3,116 1,164,897,548 0 0 22.11
247 great cormorant (BGI_N336 2014) Phalacrocorax carbo GCF_000708925.1_ASM70892v1 64,312 1,138,967,842 98,475 8,762,664 18.08
248 great cormorant (primary hap 2024 genbank) Phalacrocorax carbo GCA_963921805.1_bPhaCar2.1 351 1,283,643,005 493 98,600 22.67
249 great cormorant (primary hap 2024 refseq) Phalacrocorax carbo GCF_963921805.1_bPhaCar2.1 350 1,283,623,959 493 98,600 22.67
250 great egret (B10K-D-DBG-74 2024) Ardea alba GCA_045788385.1_ASM4578838v1 200,856 1,090,127,251 17,943 4,212,010 20.38
251 great potoo (bNycGra1 alternate hap 2020) Nyctibius grandis GCA_013368595.1_bNycGra1.alt 1,395 1,041,284,291 14 2,599 22.77
252 great potoo (primary hap 2020 genbank) Nyctibius grandis GCA_013368605.1_bNycGra1.pri 191 1,256,414,880 243 6,139,133 23.97
253 great potoo (primary hap 2020 refseq) Nyctibius grandis GCF_013368605.1_bNycGra1.pri 190 1,256,393,467 243 6,139,133 23.97
254 great tit Parus major GCF_001522545.3_Parus_major1.1 1,675 1,020,310,769 24,615 18,002,180 19.16
255 greater honeyguide (239-I01 2023) Indicator indicator GCF_027791375.1_UM_Iind_1.1 896 1,147,325,966 556 55,478 28.36
256 greater prairie chicken Tympanuchus cupido pinnatus GCA_001870855.1_T_cupido_pinnatus_GPC_3440_v1 12,186 983,776,544 48,408 3,857,299 19.91
257 greater rhea Rhea americana GCA_003343005.1_rheAme1 2,162 1,160,836,514 2,075,293 16,267,005 18.71
258 greater rhea (MKP2758 2018) Rhea americana GCF_003343005.1_rheAme1 2,163 1,160,853,228 2,075,293 16,267,005 18.71
259 greater sage-grouse Centrocercus urophasianus GCF_019232065.1_USGS_Curo_1.0 1,502 1,010,657,860 9,894 36,988,073 19.67
260 greater scaup (hap1 2025) Aythya marila GCA_965140915.1_bAytMar2.hap1.1 1,269 1,224,533,240 693 138,600 26.48
261 greater scaup (hap1.1 2025) Aythya marila GCF_965140915.1_bAytMar2.hap1.1 1,268 1,224,516,623 693 138,600 26.48
262 greater scaup (hap2 2025) Aythya marila GCA_965140925.1_bAytMar2.hap2.1 459 1,053,096,367 572 114,400 22.77
263 greater whitethroat (hap1.1 2026) Curruca communis GCA_987195945.1_bSylCom1.hap1.1 70 1,223,300,309 20 3,700 25.75
264 green peafowl Pavo muticus GCA_016647715.1_ASM1664771v1 2,446 1,061,110,005 32,668 19,660,955 20.61
265 grey catbird (hap1 2026) Dumetella carolinensis GCA_057427935.1_bDumCar1.hap1 778 1,352,081,340 221 1,241,306 32.67
266 grey catbird (hap2 2026) Dumetella carolinensis GCA_057427925.1_bDumCar1.hap2 301 1,136,594,332 140 5,421,152 26.83
267 grey heron (hap1.1 2026) Ardea cinerea GCA_987197345.1_bArdCin1.hap1.1 218 1,310,923,805 40 7,400 23.35
268 grey parrot (MU2MI4XJKV 2020) Psittacus erithacus GCA_009867235.1_ASM986723v1 49,377 1,118,034,822 4,777 376,990 19.43
269 grey wagtail (hap1.1 2026) Motacilla cinerea GCA_987196015.1_bMotCin1.hap1.1 75 1,239,185,874 26 4,300 27.21
270 ground parrot (Strahan ANWC-B61680 2023) Pezoporus wallicus GCF_028554395.1_APGP_CSIRO_Pwel_v1 8,090 1,141,458,063 0 0 22.03
271 gyrfalcon (bFalRus1 alternate hap 2020) Falco rusticolus GCA_015220155.1_bFalRus1.alt 8,370 516,243,243 0 0 16.87
272 gyrfalcon (primary hap 2020 genbank) Falco rusticolus GCA_015220075.1_bFalRus1.pri 133 1,195,847,766 635 5,345,814 18.84
273 gyrfalcon (primary hap 2020 refseq) Falco rusticolus GCF_015220075.1_bFalRus1.pri 133 1,195,847,496 635 5,345,814 18.84
274 Harpy eagle (bHarHar1 alternate hap 2022) Harpia harpyja GCA_026419925.1_bHarHar1 5,968 1,185,324,778 1 500 25.31
275 Harpy eagle (primary hap 2022 refseq) Harpia harpyja GCF_026419915.1_bHarHar1_primary_haplotype 322 1,351,447,071 342 2,651,394 24.82
276 Harris's hawk (TCWC 14879 2022) Parabuteo unicinctus GCA_025311615.1_ASM2531161v1 12,429 1,097,572,847 406,134 637,320,861 6.19
277 Hawaiian crow (bCorHaw1 alternate hap 2021) Corvus hawaiiensis GCA_020740675.1_bCorHaw1.alt.cur 2,762 628,844,469 0 0 20.95
278 Hawaiian crow (primary hap 2021 refseq) Corvus hawaiiensis GCF_020740725.1_bCorHaw1.pri.cur 188 1,151,611,379 294 1,813,227 23.63
279 helmeted guineafowl Numida meleagris GCF_002078875.1_NumMel1.0 2,466 1,043,264,150 15,598 20,122,429 20.22
280 helmeted honeyeater (B80296 2025) Lichenostomus cassidix GCF_008360975.1_HeHo_3.0 895 1,102,954,073 1,340 654,599 21.32
281 hen harrier (hap1.1 2026) Circus cyaneus GCA_987196875.1_bCirCya1.hap1.1 60 1,356,157,791 55 10,500 25.07
282 herring gull (hap1 2024 genbank) Larus argentatus GCA_964417175.1_bLarArg3.hap1.1 401 1,417,856,064 559 111,800 29.51
283 herring gull (hap1 2024 refseq) Larus argentatus GCF_964417175.1_bLarArg3.hap1.1 401 1,417,856,064 559 111,800 29.52
284 herring gull (hap2 2024) Larus argentatus GCA_964417125.1_bLarArg3.hap2.1 533 1,256,866,793 456 91,200 27.78
285 hoatzin (BGI_N306 2014) Opisthocomus hoazin GCF_000692075.1_ASM69207v1 10,256 1,203,712,246 99,371 61,546,379 18.74
286 hoatzin (hap1 2023 genbank) Opisthocomus hoazin GCA_030867145.1_bOpiHoa1.hap1 415 1,482,459,898 268 53,600 31.68
287 hoatzin (hap1 2023 refseq) Opisthocomus hoazin GCF_030867145.1_bOpiHoa1.hap1 415 1,482,459,898 268 53,600 31.68
288 hoatzin (hap2 2023) Opisthocomus hoazin GCA_030867165.1_bOpiHoa1.hap2 323 1,355,639,139 212 42,400 31.88
289 hooded crow (v6 S_Up_H32 2022) Corvus cornix cornix GCF_000738735.6_ASM73873v6 47 1,030,881,721 425 3,256,893 19.03
290 house finch (bHaeMex1 alternate hap 2022) Haemorhous mexicanus GCA_027406555.1_bHaeMex1.alt 1,003 1,039,351,984 1 13 22.74
291 house finch (primary hap 2022 refseq) Haemorhous mexicanus GCF_027477595.1_bHaeMex1.pri 184 1,148,233,018 296 11,207,146 23.53
292 house sparrow (hap1 2024 genbank) Passer domesticus GCA_036417665.1_bPasDom1.hap1 334 1,310,114,252 202 40,400 30.41
293 house sparrow (hap1 2024 refseq) Passer domesticus GCF_036417665.1_bPasDom1.hap1 335 1,310,131,054 204 40,402 30.41
294 house sparrow (hap2 2024) Passer domesticus GCA_036417895.1_bPasDom1.hap2 482 1,260,479,385 182 36,400 31.98
295 House wren (hap1 2026) Troglodytes aedon GCA_057917895.1_bTroAed1.hap1 344 1,224,961,743 259 49,000 26.03
296 House wren (hap2 2026) Troglodytes aedon GCA_057816365.1_bTroAed1.hap2 315 1,146,981,477 183 34,300 28.90
297 Humboldt's penguin (bSphHub1 alternate hap 2022) Spheniscus humboldti GCA_027474345.1_bSphHub1.alt 4,342 1,159,977,626 1 77 24.68
298 Humboldt's penguin (bSphHub1 primary hap 2022) Spheniscus humboldti GCA_027474245.1_bSphHub1.pri 136 1,358,357,718 253 1,055,061 25.75
299 hyacinth macaw (LEKZKR9XQ3 2022) Anodorhynchus hyacinthinus GCA_009936445.2_ASM993644v2 259,731 1,105,970,561 1,098 45,810 20.26
300 jackass penguin (hap1 2025) Spheniscus demersus GCA_050947425.1_bSphDem1.hap1 929 1,307,533,458 201 37,100 24.28
301 jackass penguin (hap2 2025) Spheniscus demersus GCA_050947505.1_bSphDem1.hap2 270 1,272,415,234 199 36,000 22.64
302 jackdaw (hap1.1 2025) Coloeus monedula GCA_965178545.1_bColMon1.hap1.1 729 1,263,996,688 648 129,600 26.93
303 jackdaw (hap2.1 2025) Coloeus monedula GCA_965178535.1_bColMon1.hap2.1 1,173 1,109,102,816 571 114,200 24.68
304 jackdaw (S_Up_J01 2020) Coloeus monedula GCA_013407035.1_ASM1340703v1 41 1,035,863,955 511 2,904,377 19.28
305 Japanese quail Coturnix japonica GCF_001577835.2_Coturnix_japonica_2.1 2,012 927,656,957 11,601 10,397,704 19.88
306 Japanese quail (WE 2025) Coturnix japonica GCF_054131305.1_WE-NBRP24 250 1,279,664,142 319 63,800 35.39
307 kagu (bRhyJub1 alternate hap 2023) Rhynochetos jubatus GCA_027595965.1_bRhyJub1.alt 2,818 791,426,973 1 32 25.70
308 kagu (bRhyJub1 primary hap 2023) Rhynochetos jubatus GCA_027574665.1_bRhyJub1.pri 148 1,331,454,348 300 525,241 28.26
309 kakapo (Jane alternate hap 2019) Strigops habroptila GCA_004011185.1_bStrHab1_v1.h 3,728 285,706,558 11 5,465 18.11
310 kakapo (v2 Jane 2020 refseq) Strigops habroptila GCF_004027225.2_bStrHab1.2.pri 89 1,148,597,545 373 10,544,081 20.53
311 kea Nestor notabilis GCF_000696875.1_ASM69687v1 42,180 1,053,559,886 51,381 4,379,260 18.08
312 killdeer Charadrius vociferus GCF_000708025.1_ASM70802v2 15,167 1,219,859,583 63,995 33,912,801 19.46
313 king penguin (2025) Aptenodytes patagonicus GCF_965638725.1_bAptPat1.pri.cur 618 1,352,580,174 313 37,400 24.10
314 king quail (bCotChi1hap2 2024) Excalfactoria chinensis GCF_039878825.1_bCotChi1.hap2 191 966,847,183 330 63,200 20.52
315 king vulture (hap1 2024) Sarcoramphus papa GCA_037962945.1_bSarPap1.hap1 124 1,543,950,730 154 30,800 32.53
316 king vulture (hap2 2024) Sarcoramphus papa GCA_037950955.1_bSarPap1.hap2 140 1,469,241,744 128 25,600 35.57
317 lammergeier (bGypBar2 alternate hap 2023) Gypaetus barbatus GCA_028017155.1_bGypBar2.alt 2,892 979,058,826 0 0 23.84
318 lammergeier (bGypBar2 primary hap 2023) Gypaetus barbatus GCA_028022735.1_bGypBar2.pri 232 1,365,299,843 259 2,000,432 26.52
319 lance-tailed manakin (2020) Chiroxiphia lanceolata GCF_009829145.1_bChiLan1.pri 93 1,089,631,598 206 3,303,511 20.07
320 lance-tailed manakin (alternate hap 2020) Chiroxiphia lanceolata GCA_009829205.1_bChiLan1.alt 4,269 1,054,616,617 0 0 19.51
321 lance-tailed manakin (primary hap 2020) Chiroxiphia lanceolata GCA_009829145.1_bChiLan1.pri 93 1,089,631,598 206 3,303,511 20.07
322 lanner falcon (bFalBia1 alternate hap 2022) Falco biarmicus GCA_023634305.1_bFalBia1.alt 3,090 1,202,443,328 0 0 22.09
323 lanner falcon (bFalBia1 primary hap 2022 refseq) Falco biarmicus GCF_023638135.1_bFalBia1.pri 397 1,285,492,283 158 2,152,808 23.59
324 lava heron (hap1 2026) Butorides sundevalli GCA_057816235.1_bButSun1.hap1 163 1,256,974,176 142 26,835 22.65
325 lava heron (hap2 2026) Butorides sundevalli GCA_057816225.1_bButSun1.hap2 162 1,250,983,795 158 29,535 22.67
326 lesser black-backed gull (hap1.2 2025) Larus fuscus GCA_963932225.2_bLarFus1.hap1.2 1,974 1,425,674,373 675 135,000 30.90
327 lesser black-backed gull (hap2.2 2025) Larus fuscus GCA_963932325.2_bLarFus1.hap2.2 613 1,291,628,069 646 129,215 25.12
328 lesser black-backed gull (primary hap 2024) Larus fuscus GCA_963932225.1_bLarFus1.1 1,367 1,324,286,540 537 107,415 27.18
329 lesser kestrel (alternate hap 2021) Falco naumanni GCA_017639645.1_bFalNau1.mat 551 1,156,765,323 258 11,969,465 19.17
330 lesser kestrel (primary hap 2021) Falco naumanni GCA_017639655.1_bFalNau1.pat 291 1,215,719,661 298 4,077,287 19.20
331 lesser kestrel (v2 2021) Falco naumanni GCF_017639655.2_bFalNau1.pat 291 1,215,719,661 298 4,077,287 19.20
332 lesser prairie-chicken (F22 2022) Tympanuchus pallidicinctus GCF_026119805.1_pur_lepc_1.0 206 994,352,574 58 5,800 20.80
333 lesser rhea (206185 2018) Rhea pennata GCA_003342835.1_rhePen1 3,019 1,168,291,008 1,039,616 16,746,726 19.17
334 lesser rhea (bPtePen1 alternate hap 2023) Rhea pennata GCA_028389885.1_bPtePen1.alt 910 983,620,806 0 0 21.55
335 lesser rhea (bPtePen1 primary hap 2023 refseq) Rhea pennata GCF_028389875.1_bPtePen1.pri 180 1,269,016,774 128 1,451,673 22.80
336 lesser white-fronted goose (hap1.1 2025) Anser erythropus GCA_965277985.1_bAnsEry1.hap1.1 926 1,339,895,251 920 184,000 29.95
337 lesser white-fronted goose (hap2.1 2025) Anser erythropus GCA_965277975.1_bAnsEry1.hap2.1 524 1,168,023,157 723 144,600 26.10
338 line-cheeked spinetail (hap1 2026) Cranioleuca antisiensis GCA_060712555.1_bCraAnt1.1.hap1 999 1,128,839,730 836 83,600 21.53
339 little egret Egretta garzetta GCF_000687185.1_ASM68718v1 11,791 1,206,501,934 88,871 48,695,403 19.00
340 little owl (bAthNoc1.hap1.1 2025) Athene noctua GCF_965140245.1_bAthNoc1.hap1.1 716 1,355,857,592 572 114,400 25.15
341 little owl (hap1.1 2025) Athene noctua GCA_965140245.1_bAthNoc1.hap1.1 717 1,355,875,761 572 114,400 25.15
342 little owl (hap2.1 2025) Athene noctua GCA_965140185.1_bAthNoc1.hap2.1 660 1,302,383,638 552 110,415 22.54
343 long-tailed duck (alternate hap 2024) Clangula hyemalis GCA_963989315.1_bClaHye2.1_alternate_haplotype 1,867 854,027,955 1 25 23.87
344 long-tailed duck (primary hap 2024 genbank) Clangula hyemalis GCA_963989345.1_bClaHye2.1 272 1,206,104,048 544 108,625 26.17
345 long-tailed duck (primary hap 2024 refseq) Clangula hyemalis GCF_963989345.1_bClaHye2.1 271 1,206,087,415 544 108,625 26.17
346 long-tailed hermit (PSU5 alternate hap 2022) Phaethornis superciliosus GCA_023637925.1_DD_ASM_B1a 230 1,014,956,223 0 0 20.48
347 long-tailed hermit (PSU5 alternate hap 2025) Phaethornis superciliosus GCA_023637925.2_bPhaSup1.alt 230 1,014,956,223 0 0 20.48
348 long-tailed hermit (v2 PSU5 primary hap 2025) Phaethornis superciliosus GCA_023637945.2_bPhaSup1.pri 65 1,020,009,783 140 3,810,214 20.12
349 Macqueen's bustard (bChlMac1 2024) Chlamydotis macqueenii GCF_036417535.1_bChlMac1.mat 328 1,273,916,401 100 20,000 27.09
350 Macqueen's bustard (BGI_N324 2014) Chlamydotis macqueenii GCF_000695195.1_ASM69519v1 59,693 1,086,566,339 56,130 3,604,992 20.04
351 Macqueen's bustard (maternal hap 2024) Chlamydotis macqueenii GCA_036417535.1_bChlMac1.mat 329 1,273,933,319 100 20,000 27.09
352 Macqueen's bustard (paternal 2024) Chlamydotis macqueenii GCA_036418225.1_bChlMac1.pat 343 1,106,587,813 84 16,800 25.27
353 maguari stork (bCicMag1 alternate hap 2021) Ciconia maguari GCA_017639665.1_bCicMag1.alt 4,278 967,599,765 5 726 19.61
354 maguari stork (primary hap 2021) Ciconia maguari GCA_017639555.1_bCicMag1.pri 153 1,239,437,416 232 22,209,791 19.58
355 mallard (CAU_Wild1.0 2019) Anas platyrhynchos GCA_008746955.1_CAU_Wild1.0 1,665 1,211,992,756 318 1,235,431 25.07
356 mallard (hap1 2024) Anas platyrhynchos GCA_964188345.1_bAnaPla2.hap1.1 936 1,300,248,985 571 114,200 28.71
357 mallard (hap2 2024) Anas platyrhynchos GCA_964188335.1_bAnaPla2.hap2.1 487 1,136,573,142 485 97,000 26.25
358 mallard (Pekin duck 2017) Anas platyrhynchos platyrhynchos GCA_002743455.1_CAU_duck1.0 21,240 1,136,415,614 25,623 56,312,069 20.28
359 mallard (Pekin duck Z2 2020 Zhejiang U) Anas platyrhynchos GCF_015476345.1_ZJU1.0 756 1,188,533,289 905 4,230,438 24.63
360 mallard (Pekin duck ZD024472 2025) Anas platyrhynchos GCF_047663525.1_IASCAAS_PekinDuck_T2T 42 1,261,986,430 0 0 27.63
361 mallard PBH1.5 Anas platyrhynchos GCF_003850225.1_IASCAAS_PekingDuck_PBH1.5 2,150 1,126,176,092 71,703 2,915,825 21.95
362 Mariana crow Corvus kubaryi GCF_017639235.1_C.kubaryi_AGA036_p1.0 1,443 1,057,484,666 10,579 11,229,600 18.96
363 Mauritius kestrel (alternate hap 2023) Falco punctatus GCA_963210275.1_bFalPun1.1_alternate_haplotype 2,259 390,584,314 0 0 22.52
364 Mauritius kestrel (primary hap 2023 genbank) Falco punctatus GCA_963210335.1_bFalPun1.1 316 1,279,277,844 407 81,600 22.85
365 Mauritius kestrel (primary hap 2023 refseq) Falco punctatus GCF_963210335.1_bFalPun1.1 316 1,279,277,844 407 81,600 22.85
366 Mauritius parakeet (alternate hap 2023) Psittacula echo GCA_963243765.1_bPsiEch3.1_alternate_haplotype 2,130 791,895,490 0 0 24.89
367 Mauritius parakeet (primary hap 2023 genbank) Psittacula echo GCA_963264785.1_bPsiEch3.1 172 1,203,831,919 358 71,432 25.22
368 Mauritius parakeet (primary hap 2023 refseq) Psittacula echo GCF_963264785.1_bPsiEch3.1 171 1,203,813,063 358 71,432 25.22
369 medium ground-finch Geospiza fortis GCF_000277835.1_GeoFor_1.0 27,239 1,065,292,181 68,589 24,006,152 19.54
370 mew gull (hap1.1 2025) Larus canus GCA_966204495.1_bLarCan2.hap1.1 312 1,317,733,845 548 109,600 26.56
371 mew gull (hap2.1 2025) Larus canus GCA_966207165.1_bLarCan2.hap2.1 316 1,387,001,037 508 101,600 29.88
372 monk parakeet Myiopsitta monachus GCA_017639245.1_MMon_1.0 291 1,168,583,304 352 175,021 22.56
373 Montezuma quail (F1298 2024) Cyrtonyx montezumae GCF_038088225.1_pur_monq_1.0 287 1,011,858,581 234 23,400 22.16
374 mute swan (bCygOlo1 v2 alternate hap 2021) Cygnus olor GCA_009769485.2_bCygOlo1.alt.v2 5,626 814,594,871 14 918 20.18
375 mute swan (primary hap 2021) Cygnus olor GCA_009769625.2_bCygOlo1.pri.v2 171 1,134,186,636 451 9,922,725 21.32
376 mute swan (v2 primary hap 2021) Cygnus olor GCF_009769625.2_bCygOlo1.pri.v2 171 1,134,186,642 451 9,922,725 21.32
377 Nelson's sparrow (bAmmNel1 alternate hap 2023) Ammospiza nelsoni GCA_027579665.1_bAmmNel1.alt 2,834 1,033,298,713 0 0 26.31
378 Nelson's sparrow (bAmmNel1 primary hap 2023 refseq) Ammospiza nelsoni GCF_027579445.1_bAmmNel1.pri 77 1,185,463,352 215 5,092,979 25.88
379 New Caledonian crow (alternate hap 2019) Corvus moneduloides GCA_009651025.1_bCorMon1.alt 894 905,198,257 0 0 19.52
380 New Caledonian crow (primary hap 2019 genbank) Corvus moneduloides GCA_009650955.1_bCorMon1.pri 106 1,112,750,989 289 28,870,195 19.58
381 New Caledonian crow (primary hap 2019 refseq) Corvus moneduloides GCF_009650955.1_bCorMon1.pri 105 1,112,734,094 289 28,870,195 19.58
382 Nicobar pigeon (hap1 2024 genbank) Caloenas nicobarica GCA_036013445.1_bCalNic1.hap1 807 1,285,851,275 117 20,400 28.09
383 Nicobar pigeon (hap1 2024 refseq) Caloenas nicobarica GCF_036013445.1_bCalNic1.hap1 806 1,285,834,579 117 20,400 28.09
384 Nicobar pigeon (hap2 2024) Caloenas nicobarica GCA_036010745.1_bCalNic1.hap2 226 1,197,404,482 118 20,600 23.25
385 night parrot (Australia 2023) Pezoporus occidentalis GCF_034315485.1_CSIRO_AGI_Poc_V1 3,590 1,132,638,028 3 3 22.93
386 North Island brown kiwi (hap1 2024 genbank) Apteryx mantelli GCA_036417845.1_bAptMan1.hap1 409 1,504,415,252 170 34,000 27.67
387 North Island brown kiwi (hap1 2024 refseq) Apteryx mantelli GCF_036417845.1_bAptMan1.hap1 408 1,504,396,159 170 34,000 27.67
388 North Island brown kiwi (hap2 2024) Apteryx mantelli GCA_036417975.1_bAptMan1.hap2 349 1,593,539,360 155 31,000 30.47
389 northern bobwhite Colinus virginianus GCA_008692595.2_Cv_LA_2.0 6,035 948,540,911 33,134 9,181,491 19.59
390 northern fulmar Fulmarus glacialis GCF_000690835.1_ASM69083v1 57,389 1,141,395,646 54,825 5,766,974 18.44
391 northern gannet (hap1 2023) Morus bassanus GCA_031468805.1_bMorBas2.hap1 829 1,381,630,140 263 52,600 27.30
392 northern gannet (hap2 2023) Morus bassanus GCA_031468815.1_bMorBas2.hap2 421 1,294,804,326 248 49,600 21.09
393 northern goshawk (bAccGen1 v1 alternate hap 2022) Astur gentilis GCA_929447715.1_bAccGen1.1_alternate_haplotype 4,484 1,112,029,929 2 50 24.06
394 northern lapwing (hap1.1 2025 genbank) Vanellus vanellus GCA_965231255.1_bVanVan1.hap1.1 2,408 1,476,623,026 936 187,200 32.55
395 northern lapwing (hap1.1 2025 refseq) Vanellus vanellus GCF_965231255.1_bVanVan1.hap1.1 2,407 1,476,605,334 936 187,200 32.55
396 Northern long-tailed tit (hap1.1 2025) Aegithalos caudatus GCA_977066295.1_bAegCau2.hap1.1 1,323 1,216,984,724 436 49,800 28.86
397 Northern long-tailed tit (hap2.1 2025) Aegithalos caudatus GCA_977066235.1_bAegCau2.hap2.1 1,473 1,157,973,908 383 41,000 25.79
398 northern pintail (alternate hap 2024) Anas acuta GCA_963932075.1_bAnaAcu1.1_alternate_haplotype 1,960 1,057,303,051 1 200 23.12
399 northern pintail (primary hap 2024 genbank) Anas acuta GCA_963932015.1_bAnaAcu1.1 395 1,189,313,589 631 125,881 25.92
400 northern pintail (primary hap 2024 refseq) Anas acuta GCF_963932015.1_bAnaAcu1.1 394 1,189,296,988 631 125,881 25.92
401 Northern shoveler (hap1.1 2025) Spatula clypeata GCA_977066335.1_bSpaCly1.hap1.1 538 1,236,977,220 469 93,800 27.64
402 Northern shoveler (hap2.1 2025) Spatula clypeata GCA_977066225.1_bSpaCly1.hap2.1 585 1,200,106,829 482 96,414 25.58
403 Obi paradise crow (primary hap 2025) Lycocorax pyrrhopterus obiensis GCA_014706295.2_bLycPyr6.2.pri 1,700 1,107,775,038 1,640 5,763,288 20.21
404 Obi paradise-crow (lycPyr6 2020) Lycocorax pyrrhopterus obiensis GCA_014706295.1_ASM1470629v1 1,695 1,107,771,238 1,602 5,759,488 20.21
405 oilbird (hap1 2025) Steatornis caripensis GCA_054099775.1_bSteCar1.hap1 127 1,367,962,155 118 22,525 26.56
406 oilbird (hap2 2025) Steatornis caripensis GCA_054099845.1_bSteCar1.hap2 94 1,200,758,481 102 19,600 24.08
407 Okarito brown kiwi Apteryx rowi GCF_003343035.1_aptRow1 4,120 1,228,902,913 696,987 19,303,568 18.35
408 Oriental scops-owl (oso-nibr-517 2020) Otus sunia GCA_010365825.1_OtuSun1.0 108,826 1,231,433,939 42,691 19,408,919 19.28
409 Oriental stork (2023) Ciconia boyciana GCF_034638445.1_ASM3463844v1 281 1,240,632,876 149 65,914 20.60
410 peregrine falcon (bFalPer1 alternate hap 2022) Falco peregrinus GCA_023634185.1_bFalPer1.alt 2,745 1,175,509,191 0 0 21.18
411 peregrine falcon (bFalPer1 primary hap 2022 refseq) Falco peregrinus GCF_023634155.1_bFalPer1.pri 125 1,311,598,859 241 4,014,394 24.67
412 peregrine falcon (BGI 2013) Falco peregrinus GCF_000337955.1_F_peregrinus_v1.0 7,021 1,171,973,431 76,069 18,569,083 18.40
413 peregrine falcon (hap1.1 2025) Falco peregrinus GCA_965282525.1_bFalPer5.hap1.1 296 1,284,672,629 433 86,600 21.85
414 peregrine falcon (hap2.1 2025) Falco peregrinus GCA_965282645.1_bFalPer5.hap2.1 329 1,209,127,676 376 75,200 24.00
415 pin-tailed whydah (BioBank_ID:100142 2022) Vidua macroura GCF_024509145.1_ASM2450914v1 146 1,123,269,635 338 33,800 23.75
416 pink pigeon (alternate hap 2023) Nesoenas mayeri GCA_963082445.1_bNesMay2.1_alternate_haplotype 1,277 867,500,292 0 0 21.65
417 pink pigeon (primary hap 2023 genbank) Nesoenas mayeri GCA_963082525.1_bNesMay2.1 143 1,183,271,950 509 101,800 22.92
418 pink pigeon (primary hap 2023 refseq) Nesoenas mayeri GCF_963082525.1_bNesMay2.1 143 1,183,271,950 509 101,800 22.92
419 pink-footed goose (alternate hap 2024) Anser brachyrhynchus GCA_964034845.1_bAnsBra1.1_alternate_haplotype 5,112 1,147,412,421 0 0 28.45
420 pink-footed goose (primary hap 2024 genbank) Anser brachyrhynchus GCA_964034855.1_bAnsBra1.1 715 1,287,337,719 1,137 227,400 29.51
421 pink-footed goose (primary hap 2024 refseq) Anser brachyrhynchus GCF_964034855.1_bAnsBra1.1 715 1,287,337,719 1,137 227,400 29.51
422 plumbeous ibis (bTheCae1 alternate hap 2021) Theristicus caerulescens GCA_020745805.1_bTheCae1.alt.cur 749 1,041,135,290 4 95 19.61
423 plumbeous ibis (primary hap 2021) Theristicus caerulescens GCA_020745775.1_bTheCae1.pri.cur 88 1,203,372,763 104 2,268,207 20.10
424 Puerto Rican parrot (2026) Amazona vittata GCA_980694505.1_bAmaVit1.2.curated_20260112_allscaffolds.masked 124 1,182,534,869 598 59,800 24.64
425 Puerto Rican parrot (LU 182127 2020) Amazona vittata GCA_000332375.2_ASM33237v2 62,712 1,446,649,664 137,572 367,660,255 14.32
426 razorbill (2006_11_07_Graehlm_vinge_78 2019) Alca torda GCA_008658365.1_bAlcTor1_primary 95 1,178,492,568 227 3,561,127 20.12
427 razorbill (alternate hap 2006_11_07_Graehlm_vinge_78 2019) Alca torda GCA_008658355.1_bAlcTor1_alternate 3,309 1,220,378,950 0 0 20.28
428 red-backed fairy wren (Western Australia 2023) Malurus melanocephalus GCF_030028575.1_MMel_1.1 10,634 1,020,684,368 3,337,637 34,751,376 18.48
429 red-billed chough (hap1.1 2026) Pyrrhocorax pyrrhocorax GCA_987488855.1_bPyrPyr1.hap1.1 75 1,198,465,287 19 3,400 24.04
430 red-billed tropicbird (maternal hap 2024 genbank) Phaethon aethereus GCA_964289735.1_bPhaAeh10.maternal.1 657 1,321,027,743 1,269 253,800 25.01
431 red-billed tropicbird (maternal hap 2024 refseq) Phaethon aethereus GCF_964289735.1_bPhaAeh10.maternal.1 657 1,321,027,743 1,269 253,800 25.01
432 red-billed tropicbird (paternal hap 2024) Phaethon aethereus GCA_964289755.1_bPhaAeh10.paternal.1 500 1,165,860,358 1,072 214,400 24.47
433 red-crested pochard (alternate hap 2024) Netta rufina GCA_964035535.1_bNetRuf1.1_alternate_haplotype 3,206 968,137,862 1 200 24.25
434 red-crested pochard (primary hap 2024 genbank) Netta rufina GCA_964035555.1_bNetRuf1.1 141 1,166,978,622 714 142,800 24.55
435 red-crested pochard (primary hap 2024 refseq) Netta rufina GCF_964035555.1_bNetRuf1.1 140 1,166,961,997 714 142,800 24.55
436 red-crested turaco (alternate hap 2019) Tauraco erythrolophus GCA_009764505.1_bTauEry1.alt 3,476 1,084,112,861 0 0 21.89
437 red-crested turaco (bTauEry1 primary hap 2019) Tauraco erythrolophus GCF_009769465.1_bTauEry1.pri 140 1,252,271,553 344 26,400,695 22.20
438 red-crested turaco (primary hap 2019) Tauraco erythrolophus GCA_009769465.1_bTauEry1.pri 140 1,252,271,553 344 26,400,695 22.20
439 red-fronted tinkerbird (bPogPus1 alternate hap 2020) Pogoniulus pusillus GCA_015220175.1_bPogPus1.alt 2,748 1,101,771,457 12 2,226 34.66
440 red-fronted tinkerbird (primary hap 2020 genbank) Pogoniulus pusillus GCA_015220805.1_bPogPus1.pri 253 1,272,358,903 307 6,012,757 35.91
441 red-fronted tinkerbird (primary hap 2020 refseq) Pogoniulus pusillus GCF_015220805.1_bPogPus1.pri 252 1,272,338,968 307 6,012,757 35.91
442 red-legged partridge Alectoris rufa GCA_019345075.1_ASM1934507v1 10,598 1,027,480,606 18,534 31,309,750 20.20
443 red-legged seriema (alternate hap 2019) Cariama cristata GCA_009819485.1_bCarCri1.alt 2,840 930,239,327 1 98 18.92
444 red-legged seriema (primary hap 2019) Cariama cristata GCA_009819825.1_bCarCri1.pri 110 1,215,245,693 194 4,933,338 19.73
445 red-throated loon (BGI_N328 2014) Gavia stellata GCF_000690875.1_ASM69087v1 61,831 1,129,694,867 64,882 6,867,421 18.23
446 red-throated loon (hap1 2023) Gavia stellata GCA_030936125.1_bGavSte3.hap1 2,965 1,403,461,371 260 52,000 27.37
447 red-throated loon (hap2 2023 refseq) Gavia stellata GCF_030936135.1_bGavSte3.hap2 1,185 1,321,270,170 249 49,800 23.65
448 red-vreasted merganser (hap1.1 2026) Mergus serrator GCA_977964035.1_bMerSer1.hap1.1 2,555 1,410,971,679 596 119,025 36.76
449 red-vreasted merganser (hap2.1 2025) Mergus serrator GCA_977964335.1_bMerSer1.hap2.1 1,613 1,320,612,548 558 111,425 32.75
450 red-winged blackbird (hap1 2025 genbank) Agelaius phoeniceus GCA_051311805.1_bAgePho1.hap1 300 1,238,428,090 185 146,858 25.79
451 red-winged blackbird (hap1 2025 refseq) Agelaius phoeniceus GCF_051311805.1_bAgePho1.hap1 299 1,238,411,316 185 146,858 25.79
452 red-winged blackbird (hap2 2025) Agelaius phoeniceus GCA_051348685.1_bAgePho1.hap2 289 1,146,822,152 171 102,863 27.11
453 red-winged blackbird (v1 BioBank_ID:100140 2023) Agelaius phoeniceus GCF_020745825.1_Agelaius_phoeniceus_1.1 410 1,188,547,179 106 51,600 25.46
454 red-winged blackbird (v3 BioBank_ID:100140 2023) Agelaius phoeniceus GCA_020745825.3_Agelaius_phoeniceus_1.1 409 1,188,530,404 106 51,600 25.46
455 rhinoceros hornbill Buceros rhinoceros silvestris GCF_000710305.1_ASM71030v1 62,257 1,065,782,791 118,543 17,002,997 17.77
456 rifleman (bAcaChl1 alternate hap 2021) Acanthisitta chloris GCA_016880875.1_bAcaChl1.alt 2,879 827,793,803 20 1,043 19.12
457 rifleman (primary hap 2021) Acanthisitta chloris GCA_016904835.1_bAcaChl1.pri 206 1,077,387,582 195 4,215,879 19.97
458 rifleman (primary hap 2026) Acanthisitta chloris GCA_016904835.2_bAcaChl1.pri 206 1,077,387,582 195 4,215,879 19.97
459 ring-necked pheasant Phasianus colchicus GCF_004143745.1_ASM414374v1 39,678 1,017,524,032 19,995 7,944,423 20.84
460 ring-necked pheasant (hap1.1 2026) Phasianus colchicus GCA_987193195.1_bPhaCol1.hap1.1 109 1,109,802,809 17 2,562 24.37
461 rock pigeon (Danish tumbler 2013 BGI) Columba livia GCF_000337935.1_Cliv_1.0 14,923 1,107,989,085 85,176 21,063,210 19.45
462 rock pigeon (Tarim TR01 2023) Columba livia GCA_032719375.1_Trm_1.0 79 1,295,808,506 12 1,200 22.56
463 rock pigeon (v2 racing homer 2024 refseq) Columba livia GCF_036013475.1_bColLiv1.pat.W.v2 869 1,325,566,026 249 46,900 29.94
464 rock pigeon (v2 racing homer maternal hap 2024) Columba livia GCA_036010775.2_bColLiv1.mat.v2 650 1,181,506,259 192 37,200 28.60
465 rock ptarmigan (bLagMut1 alternate hap 2022) Lagopus muta GCA_023344045.1_bLagMut1_alternate 3,212 923,340,374 13 1,320 20.42
466 rock ptarmigan (primary hap 2022 refseq) Lagopus muta GCF_023343835.1_bLagMut1_primary 165 1,026,771,810 210 71,937 21.77
467 ruddy duck Oxyura jamaicensis GCF_011077185.1_BPBGC_Ojam_1.0 9,589 1,147,585,764 18,437 31,354,528 21.19
468 ruff Calidris pugnax GCF_001431845.1_ASM143184v1 3,753 1,229,094,286 30,404 46,140,523 20.49
469 rufous-necked snowfinch Pyrgilauda ruficollis GCF_017590135.1_ASM1759013v1 24,055 1,045,984,361 5,524 2,111,605 19.91
470 rusty-margined flycatcher (MyiCay16 2022) Myiozetetes cayanensis GCF_022539395.1_myiCay2020 1,692 1,075,628,138 181 1,370,356 20.32
471 saffron-crested tyrant-manakin Neopelma chrysocephalum GCF_003984885.1_ASM398488v2 38,089 1,139,224,170 15,342 11,277,790 20.91
472 sage sparrow (canescens MVZ Bird 192114 alternate hap 2022) Artemisiospiza belli GCA_021966175.1_bArtBel1.0.a 43,035 2,257,281,749 12 1,212 43.91
473 sage sparrow (canescens MVZ Bird 192114 primary hap 2022) Artemisiospiza belli GCA_021963965.1_bArtBel1.0.p 1,339 1,401,818,823 200 20,046 36.19
474 Saker falcon (bFalChe1 alternate hap 2022) Falco cherrug GCA_023634115.1_bFalChe1.alt 4,160 1,210,282,093 2 51 23.62
475 Saker falcon (BGI 2013) Falco cherrug GCF_000337975.1_F_cherrug_v1.0 5,863 1,174,811,715 70,035 23,817,946 18.25
476 Saker falcon (primary hap 2022 refseq) Falco cherrug GCF_023634085.1_bFalChe1.pri 283 1,309,385,023 258 3,961,655 24.96
477 saltmarsh sparrow (bAmmCau1 alternate hap 2023) Ammospiza caudacuta GCA_027887135.1_bAmmCau1.alt 3,054 1,166,743,317 0 0 26.27
478 saltmarsh sparrow (bAmmCau1 primary hap 2023 refseq) Ammospiza caudacuta GCF_027887145.1_bAmmCau1.pri 282 1,241,209,685 363 2,919,107 29.04
479 Savannah sparrow (alternate hap 2023) Passerculus sandwichensis GCA_031876245.1_bPasSan2.alt 1,242 1,133,770,116 107 21,234 25.77
480 Savannah sparrow (FMNH 499929 alternate hap 2022) Passerculus sandwichensis alaudinus GCA_022578375.1_bPasSan1.0.a 29,743 1,785,383,892 1,822 182,214 28.02
481 Savannah sparrow (FMNH 499929 primary hap 2022) Passerculus sandwichensis alaudinus GCA_022577445.1_bPasSan1.0.p 337 1,152,292,115 339 33,925 24.47
482 Savannah sparrow (primary hap 2023) Passerculus sandwichensis GCA_031885435.1_bPasSan2.pri 110 1,270,940,266 249 2,812,735 27.00
483 scrub jay (v1 FSJ_1873_10779 2024) Aphelocoma coerulescens GCF_041296385.1_UR_Acoe_1.0 660 1,330,915,384 140 47,501 29.90
484 scrub jay (v2 FSJ_1873_10779 2024) Aphelocoma coerulescens GCF_041296385.2_UR_Acoe_1.0 660 1,330,915,384 140 47,501 29.90
485 seaside sparrow (alternate hap 2024) Ammospiza maritima maritima GCA_036010685.1_bAmmMar1.alt 4,329 1,368,496,753 3 427 33.30
486 seaside sparrow (bAmmMar1 primary hap 2024) Ammospiza maritima maritima GCA_036010785.1_bAmmMar1.pri 501 1,397,856,043 365 2,055,583 34.58
487 Seychelles magpie-robin (hap1 2025) Copsychus sechellarum GCA_054084125.1_bCopSec1.hap1 314 1,384,301,290 233 1,025,160 36.38
488 Seychelles magpie-robin (hap2 2025) Copsychus sechellarum GCA_054084135.1_bCopSec1.hap2 189 1,040,605,357 220 1,627,150 25.82
489 silver-eye (hap1.1 2025 genbank) Zosterops lateralis GCA_965231275.1_bZosLat1.hap1.1 427 1,143,512,649 703 140,600 22.40
490 silver-eye (hap1.1 2025 refseq) Zosterops lateralis GCF_965231275.1_bZosLat1.hap1.1 426 1,143,494,826 703 140,600 22.40
491 silver-eye (hap2.1 2025) Zosterops lateralis GCA_965231245.1_bZosLat1.hap2.1 818 1,047,426,550 641 128,200 23.59
492 small tree finch (2019) Camarhynchus parvulus GCF_901933205.1_STF_HiC 1,345 1,051,609,828 185 92,500 22.09
493 small tree finch (2020) Camarhynchus parvulus GCA_902806625.1_Camarhynchus_parvulus_V1.1 1,756 1,064,016,364 224 112,000 22.28
494 smew (hap1.1 2025) Mergellus albellus GCA_971847395.1_bMerAlb1.hap1.1 845 1,298,144,153 768 153,425 29.45
495 smew (hap2.1 2025) Mergellus albellus GCA_971812175.1_bMerAlb1.hap2.1 910 1,160,594,237 631 126,200 27.82
496 song sparrow (alternate hap 2024) Melospiza melodia melodia GCA_035771015.1_bMelMel2.alt 2,328 1,356,105,093 0 0 37.29
497 song sparrow (gouldii PMB2087b alternate hap 2022) Melospiza melodia GCA_022749775.1_bMelMel1.0.a 34,688 1,938,102,026 5 505 40.27
498 song sparrow (gouldii PMB2087b primary hap 2022) Melospiza melodia GCA_022749695.1_bMelMel1.0.p 501 1,356,304,709 323 32,321 34.69
499 song sparrow (primary hap 2024 genbank) Melospiza melodia melodia GCA_035770615.1_bMelMel2.pri 354 1,541,261,971 299 1,079,098 39.28
500 song sparrow (primary hap 2024 refseq) Melospiza melodia melodia GCF_035770615.1_bMelMel2.pri 353 1,541,245,192 299 1,079,098 39.28
501 South Island takahe (alternate hap 2021) Porphyrio hochstetteri GCA_020801775.1_bPorHoc1.pat.decon 178 1,245,128,614 238 10,404,950 24.85
502 South Island takahe (primary hap 2021) Porphyrio hochstetteri GCA_020800305.1_bPorHoc1.mat.Z.cur 174 1,270,294,353 327 5,316,249 25.92
503 speckled mousebird (BGI_N325 2014) Colius striatus GCF_000690715.1_ASM69071v1 70,188 1,075,931,597 44,462 3,761,058 19.44
504 speckled mousebird (hap1 2023 refseq) Colius striatus GCF_028858725.1_bColStr4.1.hap1 191 1,212,482,152 161 5,847,728 23.44
505 speckled mousebird (hap1 2023) Colius striatus GCA_028858725.2_bColStr4.1.hap1 190 1,212,464,869 158 5,847,725 23.44
506 speckled mousebird (v2 hap2 2023) Colius striatus GCA_028858625.2_bColStr4.1.hap2 242 1,153,503,718 136 5,470,024 25.49
507 spotted owl (hap2 2023) Strix occidentalis GCA_030819815.1_bStriOcc1.0.hap2 790 1,432,200,851 190 19,000 28.45
508 Steller's jay (frontalis alternate hap 2022) Cyanocitta stelleri GCA_026168045.1_bCyaSte1.0.a 957 1,177,494,911 200 20,000 27.12
509 Steller's jay (frontalis primary hap 2022) Cyanocitta stelleri GCA_026167965.1_bCyaSte1.0.p 352 1,162,964,953 223 22,300 23.69
510 sun parakeet (2019) Aratinga solstitialis GCA_902168055.1_ARATINGA-SOLSTITIALIS-ASSEMBLY-PRJEB33153 1,570 1,169,445,099 578,921 36,076,735 21.17
511 sunbittern Eurypyga helias GCF_000690775.1_ASM69077v1 62,699 1,088,019,637 52,471 4,990,991 18.84
512 Suruca trogon (bTroSur1 alternate hap 2021) Trogon surrucura GCA_020746095.1_bTroSur1.alt.cur 1,535 997,329,498 17 496 21.93
513 Suruca trogon (primary hap 2021) Trogon surrucura GCA_020746105.1_bTroSur1.pri.cur 182 1,165,749,515 253 10,270,755 22.51
514 Swainson's thrush (bCatUst1 v2 alternate hap 2020) Catharus ustulatus GCA_009819505.2_bCatUst1.alt.v2 3,601 1,128,658,440 13 343 22.74
515 Swainson's thrush (primary hap 2020) Catharus ustulatus GCA_009819885.2_bCatUst1.pri.v2 161 1,131,635,256 429 12,903,695 22.52
516 Swainson's thrush (v2 primary hap 2020) Catharus ustulatus GCF_009819885.2_bCatUst1.pri.v2 160 1,131,616,530 429 12,903,695 22.52
517 swamp sparrow (bMelGeo1 alternate hap 2023) Melospiza georgiana GCA_028019105.1_bMelGeo1.alt 862 1,075,048,352 0 0 25.04
518 swamp sparrow (bMelGeo1 primary hap 2023 refseq) Melospiza georgiana GCF_028018845.1_bMelGeo1.pri 40 1,162,015,399 236 1,233,091 24.53
519 Swan (goose HZ-2024a 2024) Anser cygnoides GCF_040182565.1_Taihu_goose_T2T_genome 75 1,215,354,515 42 6,700 24.67
520 Swan (goose T2T HZ-2024a 2024) Anser cygnoides GCA_040182565.1_Taihu_goose_T2T_genome 74 1,215,337,776 42 6,700 24.66
521 swan goose (Sichuan white goose 2017) Anser cygnoides GCF_002166845.1_GooseV1.0 1,802 1,130,293,421 63,061 29,604,614 19.74
522 swan goose (Tianfu 2020) Anser cygnoides GCA_013030995.1_ASM1303099v1 2,119 1,113,895,350 716 71,600 21.22
523 swan goose (Zhedong 2015) Anser cygnoides domesticus GCF_000971095.1_AnsCyg_PRJNA183603_v1.0 7,593 1,119,151,626 84,351 35,379,405 19.45
524 swift parrot (hap1 2024) Lathamus discolor GCF_037157495.1_bLatDis1.hap1 367 1,241,003,407 186 2,209,747 26.11
525 Swift parrot (hap2 2024) Lathamus discolor GCA_037157625.1_bLatDis1.hap2 413 1,123,412,812 122 2,852,181 26.31
526 Taiga bean goose (alternate hap 2025) Anser fabalis GCA_965250455.1_bAnsFab1.1_alternate_haplotype 8,033 962,146,298 0 0 33.32
527 Taiga bean goose (primary hap 2025) Anser fabalis GCA_965250395.1_bAnsFab1.1 879 1,316,291,205 973 194,625 30.98
528 tawny frogmouth (bPodStr1 alternate hap 2023) Podargus strigoides GCA_028020675.1_bPodStr1.alt 911 977,391,185 1 35 22.09
529 tawny frogmouth (bPodStr1 primary hap 2023) Podargus strigoides GCA_028020825.1_bPodStr1.pri 1,038 1,271,141,449 203 2,167,278 27.67
530 Tawny owl (bStrAlu1hap1 2023) Strix aluco GCF_031877795.1_bStrAlu1.hap1 202 1,414,783,145 281 4,312,653 27.44
531 tawny owl (hap1 2023) Strix aluco GCA_031877795.1_bStrAlu1.hap1 203 1,414,802,443 281 4,312,653 27.44
532 tawny owl (hap2 2023) Strix aluco GCA_031877785.1_bStrAlu1.hap2 184 1,219,048,950 206 1,471,991 24.84
533 tawny-flanked prinia (Zambia CZ2003 2024) Prinia subflava GCF_021018805.1_Cam_Psub_1.2 538 1,119,947,663 378 75,600 21.91
534 Tibetan ground-tit Pseudopodoces humilis GCF_000331425.1_PseHum1.0 5,406 1,042,997,632 21,646 12,967,196 19.96
535 tourmaline sunangel (hap1 2024 refseq) Heliangelus exortis GCF_036169615.1_bHelExo1.hap1 131 1,049,650,714 437 85,400 21.23
536 tourmaline sunangel (hap2 2024) Heliangelus exortis GCA_036172335.1_bHelExo1.hap2 200 969,853,240 370 72,600 21.82
537 tree pipit (hap1.1 2026) Anthus trivialis GCA_987193405.1_bAntTri1.hap1.1 60 1,214,367,329 2 200 25.44
538 tree swallow (Ithaca 2401-50270 2024) Tachycineta bicolor GCA_007636935.2_TRES_AUg29_2020 49,279 1,222,791,300 2,123,840 23,055,555 20.63
539 tricolored blackbird (1412-34295 alternate hap 2022) Agelaius tricolor GCA_023055385.1_bAgeTri1.0.a 450 1,142,379,013 97 9,700 25.05
540 tricolored blackbird (1412-34295 primary hap 2022 refseq) Agelaius tricolor GCF_023055355.1_bAgeTri1.0.p 213 1,157,591,681 97 9,700 23.38
541 tufted duck (2019) Aythya fuligula GCF_009819795.1_bAytFul2.pri 105 1,127,004,725 163 9,417,397 22.39
542 tufted duck (alternate hap 2019) Aythya fuligula GCA_009819845.1_bAytFul2.alt 780 1,013,629,683 1 100 21.73
543 tufted duck (primary hap 2019) Aythya fuligula GCA_009819795.1_bAytFul2.pri 104 1,126,988,109 163 9,417,397 22.39
544 tufted duck (primary hap 2025) Aythya fuligula GCA_976225485.1_bAytFul3.1 392 1,175,444,484 642 127,000 24.38
545 tufted titmouse (bBaeBic1hap1 2026) Baeolophus bicolor GCA_055754725.1_bBaeBic1.hap1 338 1,222,454,256 453 19,883,469 26.18
546 tufted titmouse (hap2 2026) Baeolophus bicolor GCA_055761795.1_bBaeBic1.hap2 259 1,127,455,526 329 19,064,915 26.48
547 tundra swan (alternate hap 2025) Cygnus columbianus GCA_965151595.1_bCygCol1.1_alternate_haplotype 600 1,147,813,669 1,098 219,600 28.66
548 tundra swan (primary hap 2025 genbank) Cygnus columbianus GCA_965151615.1_bCygCol1.1 603 1,293,538,149 540 108,000 28.81
549 tundra swan (primary hap 2025 refseq) Cygnus columbianus GCF_965151615.1_bCygCol1.1 602 1,293,521,421 540 108,000 28.81
550 turkey (Aviagen NT-WF06-2002-E0010 2014) Meleagris gallopavo GCF_000146605.3_Turkey_5.1 185,175 1,115,474,681 65,045 35,294,427 21.11
551 turkey (WU_HG_1 2021 genbank) Meleagris gallopavo GCA_905368555.1_MGAL_WU_HG_1.0 151 1,001,818,376 81 11,546 21.07
552 turkey (WU_HG_1 2026 refseq) Meleagris gallopavo GCF_905368555.1_MGAL_WU_HG_1.1 145 1,001,661,938 81 11,546 21.06
553 Ural owl (ZFMK-TIS-50842 2025) Strix uralensis GCF_047716275.1_bStrUra1 511 1,380,990,639 203 40,600 27.03
554 village indigobird (merged hap OUT-0048 2022 genbank) Vidua chalybeata GCA_026979565.1_bVidCha1_merged_haplotype 178 1,080,457,469 458 165,531 20.96
555 village indigobird (merged hap OUT-0048 2022 refseq) Vidua chalybeata GCF_026979565.1_bVidCha1_merged_haplotype 177 1,080,440,577 458 165,531 20.96
556 village indigobird (purged dups hap OUT-0048 2022) Vidua chalybeata GCA_026979555.1_bVidCha1_purged_dups_haplotype 1,939 154,870,056 0 0 34.87
557 Virginia rail (171378401 alternate hap 2022) Rallus limicola GCA_022605895.1_bRalLim1.0.a 4,450 1,425,697,905 668 66,800 32.20
558 Virginia rail (171378401 primary hap 2022) Rallus limicola GCA_022605955.1_bRalLim1.0.p 1,102 1,395,598,026 197 19,704 32.38
559 water rail (alternate hap 2025) Rallus aquaticus GCA_965250415.1_bRalAqu1.1_alternate_haplotype 5,834 1,328,671,799 0 0 27.80
560 water rail (primary hap 2025) Rallus aquaticus GCA_965250365.1_bRalAqu1.1 1,571 1,266,667,233 776 155,200 26.23
561 western capercaillie (alternate hap 2023) Tetrao urogallus GCA_951394355.1_bTetUro1.1_alternate_haplotype 5,463 853,758,599 0 0 20.30
562 western capercaillie (primary hap 2023 genbank) Tetrao urogallus GCA_951394365.1_bTetUro1.1 318 1,013,184,029 973 194,600 21.16
563 western capercaillie (primary hap 2023 refseq) Tetrao urogallus GCF_951394365.1_bTetUro1.1 318 1,013,184,029 973 194,600 21.16
564 western gull (hap1.1 2025) Larus occidentalis GCA_965654455.1_bLarOcc1.hap1.1 454 1,443,172,719 553 110,600 31.29
565 western gull (hap2.1 2025) Larus occidentalis GCA_965654445.1_bLarOcc1.hap2.1 386 1,232,342,620 482 96,400 27.09
566 western jackdaw (hap1.1 2025) Coloeus monedula GCF_965178545.1_bColMon1.hap1.1 729 1,263,996,688 648 129,600 26.93
567 western scrub-jay (hap1 CA MVZ Bird 193978 2023) Aphelocoma californica GCA_028536675.1_bAphCal1.0.hap1 1,393 1,348,500,425 272 27,200 32.03
568 western scrub-jay (hap2 CA MVZ Bird 193978 2023) Aphelocoma californica GCA_028536645.1_bAphCal1.0.hap2 1,631 1,191,279,315 168 16,800 27.56
569 western yellow wagtail (hap1.1 2026) Motacilla flava GCA_987196375.1_bMotFla1.hap1.1 46 1,217,930,904 13 2,127 26.70
570 whiskered treeswift (bHemCom1 alternate hap 2021) Hemiprocne comata GCA_020745695.1_bHemCom1.alt.cur 2,405 1,052,608,110 1 13 20.56
571 whiskered treeswift (primary hap 2021) Hemiprocne comata GCA_020745705.1_bHemCom1.pri.cur 146 1,164,813,063 218 10,174,467 21.46
572 white leghorn X broiler chicken (v2 leghorn haplotype 2021) Gallus gallus GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w 276 1,050,511,239 409 4,496,311 20.97
573 white wagtail Motacilla alba alba GCF_015832195.1_Motacilla_alba_V1.0_pri 619 1,072,670,728 906 903,500 22.46
574 white-breasted nuthatch (hap1 2025) Sitta carolinensis GCA_054054645.1_bSitCar1.hap1 234 1,184,661,615 292 5,571,854 26.08
575 white-breasted nuthatch (hap2 2025) Sitta carolinensis GCA_054054655.1_bSitCar1.hap2 274 1,091,476,743 243 9,119,126 25.83
576 white-collared manakin (Guabito, Panama 608988 2022) Manacus candei GCF_025592945.1_ASM2559294v1 643 1,121,284,527 0 0 21.52
577 white-crowned manakin (hap1 2024 genbank) Pseudopipra pipra GCA_036250125.1_bDixPip1.hap1 697 1,165,219,370 323 64,600 21.92
578 white-crowned manakin (hap1 2024 refseq) Pseudopipra pipra GCF_036250125.1_bDixPip1.hap1 696 1,165,201,947 323 64,600 21.92
579 white-crowned manakin (hap2 2024) Pseudopipra pipra GCA_036250135.1_bDixPip1.hap2 595 1,027,640,383 307 61,400 21.40
580 white-fronted goose (hap1.1 2025 genbank) Anser albifrons GCA_976913865.1_bAnsAlb1.hap1.1 1,337 1,311,801,450 1,069 213,800 28.70
581 white-fronted goose (hap2.1 2025 refseq) Anser albifrons GCA_976916765.1_bAnsAlb1.hap2.1 877 1,221,974,688 1,088 217,600 24.90
582 white-plumed antbird (INPA30051 2025) Pithys albifrons albifrons GCF_047495875.1_PitAlb_v1 53 1,144,301,792 415 1,715,619 23.67
583 white-ruffed manakin Corapipo altera GCF_003945725.1_ASM394572v1 9,068 1,095,745,976 13,527 8,367,350 19.82
584 white-rumped munia (lonStrDom1 primary hap 2025) Lonchura striata GCF_050655825.1_ASM5065582v1 42 1,306,154,016 5 500 30.58
585 white-rumped munia (maternal hap 2024 genbank) Lonchura striata GCA_046129695.1_bLonStr1.mat 161 1,207,550,942 176 31,200 27.72
586 white-rumped munia (maternal hap 2024 refseq) Lonchura striata GCF_046129695.1_bLonStr1.mat 162 1,207,567,755 176 31,200 27.72
587 white-rumped munia (paternal hap 2024) Lonchura striata GCA_046129705.1_bLonStr1.pat 202 1,195,923,327 228 40,300 27.62
588 white-rumped snowfinch Onychostruthus taczanowskii GCF_017590055.1_ASM1759005v1 11,576 1,033,733,724 4,869 1,970,431 20.31
589 white-tailed eagle (BGI_N329 2014) Haliaeetus albicilla GCF_000691405.1_ASM69140v1 50,905 1,133,549,865 60,579 5,093,567 18.15
590 white-tailed eagle (bHalAlb1.1 alternate hap 2022) Haliaeetus albicilla GCA_947461935.1_bHalAlb1.1_alternate_haplotype 4,971 693,161,704 0 0 22.93
591 white-tailed eagle (primary hap 2022 refseq) Haliaeetus albicilla GCF_947461875.1_bHalAlb1.1 189 1,320,315,924 424 84,800 23.68
592 white-tailed ptarmigan Lagopus leucura GCF_019238085.1_USGS_WTPT01 7,343 1,016,020,572 10,501 24,149,164 20.12
593 white-tailed tropicbird Phaethon lepturus GCF_000687285.1_ASM68728v1 66,785 1,152,958,507 65,286 5,878,041 19.61
594 white-throated dipper (alternate hap 2023) Cinclus cinclus GCA_963662415.1_bCinCin1.1_alternate_haplotype 4,724 1,055,621,819 0 0 24.89
595 white-throated dipper (primary hap 2023 genbank) Cinclus cinclus GCA_963662255.1_bCinCin1.1 278 1,170,855,695 658 131,600 26.63
596 white-throated dipper (primary hap 2023 refseq) Cinclus cinclus GCF_963662255.1_bCinCin1.1 277 1,170,837,027 658 131,600 26.63
597 white-throated sparrow (bZonAlb1hap1 2025) Zonotrichia albicollis GCF_047830755.1_bZonAlb1.hap1 179 1,278,921,982 229 43,800 27.31
598 white-throated sparrow (hap1 2025) Zonotrichia albicollis GCA_047830755.1_bZonAlb1.hap1 180 1,278,938,765 229 43,800 27.31
599 white-throated sparrow (hap2 2025) Zonotrichia albicollis GCA_047774235.1_bZonAlb1.hap2 150 1,176,404,578 246 46,600 27.21
600 white-throated sparrow (Tan morph 2013) Zonotrichia albicollis GCF_000385455.1_Zonotrichia_albicollis-1.0.1 6,018 1,052,600,561 41,460 46,307,051 19.15
601 white-throated tinamou Tinamus guttatus GCF_000705375.1_ASM70537v2 82,514 1,047,056,493 59,853 22,243,067 18.98
602 whooping crane (maternal hap 2023 refseq) Grus americana GCF_028858705.1_bGruAme1.mat 930 1,257,837,975 262 4,676,178 22.13
603 whooping crane (paternal hap 2023) Grus americana GCA_028858595.1_bGruAme1.pat 395 1,200,805,165 586 5,991,895 20.22
604 willow flycatcher Empidonax traillii GCF_003031625.1_ASM303162v1 7,791 1,123,485,537 39,319 52,589,169 18.90
605 wire-tailed manakin (2020) Pipra filicauda GCF_003945595.2_ASM394559v2 1,768 1,081,944,082 758 2,866,801 20.23
606 wood lark (hap1.1 2026) Lullula arborea GCA_987195895.1_bLulArb1.hap1.1 42 1,183,549,260 7 1,400 28.22
607 wood stork (Jacksonville Zoo and Gardens JAX WOST 10 2024) Mycteria americana GCF_035582795.1_USCA_MyAme_1.0 279 1,348,542,611 81 6,791 25.82
608 wrentit (frontalis MVZ Bird 193981 alternate hap 2023) Chamaea fasciata GCA_029207785.1_bChaFas1.0.hap2 1,350 1,194,527,585 342 34,200 25.86
609 wrentit (frontalis MVZ Bird 193981 primary hap 2023 refseq) Chamaea fasciata GCF_029207755.1_bChaFas1.0.hap1 1,341 1,194,528,561 353 35,300 25.86
610 Xingu scale-backed antbird (hap1 2024) Willisornis vidua GCA_045364795.1_bWilVid1_haplotype_1 1,510 1,233,406,177 773 154,600 26.66
611 Xingu scale-backed antbird (hap2 2024) Willisornis vidua GCA_045364805.1_bWilVid1_haplotype_2 743 1,070,918,723 533 106,600 23.10
612 yellow warbler (LACM:Birds122168 alternate hap 2022) Setophaga petechia GCA_024372515.1_bSetPet1.0.a 530 1,249,765,916 246 24,600 28.85
613 yellow warbler (LACM:Birds122168 primary hap 2022) Setophaga petechia GCA_024362935.1_bSetPet1.0.p 687 1,222,385,072 284 28,400 26.21
614 yellow-crowned parrot (bAmaOch1hap1 2024) Amazona ochrocephala GCA_039720435.1_bAmaOch1.hap1 1,679 1,361,915,838 198 35,700 30.39
615 yellow-crowned parrot (bAmaOch1hap2 2024) Amazona ochrocephala GCA_039720425.1_bAmaOch1.hap2 2,468 1,356,986,306 138 25,900 37.29
616 yellow-legged gull (bLarMic1.1_alternate_haplotype 2024) Larus michahellis GCA_964199725.1_bLarMic1.1_alternate_haplotype 4,673 1,288,335,985 0 0 29.60
617 yellow-legged gull (hap1.2 2025) Larus michahellis GCA_964199755.2_bLarMic1.hap1.2 920 1,466,241,164 654 130,800 31.79
618 yellow-legged gull (primary hap 2024 genbank) Larus michahellis GCA_964199755.1_bLarMic1.1 618 1,405,581,498 500 100,000 29.78
619 yellow-legged gull (primary hap 2024 refseq) Larus michahellis GCF_964199755.1_bLarMic1.1 617 1,405,564,706 500 100,000 29.78
620 yellow-throated sandgrouse (alternate hap 2019) Pterocles gutturalis GCA_009769505.1_bPteGut1.alt 1,958 1,037,717,354 0 0 20.79
621 yellow-throated sandgrouse (primary hap 2019) Pterocles gutturalis GCA_009769525.1_bPteGut1.pri 89 1,127,422,757 242 4,303,557 21.19
622 zebra finch (2025) Taeniopygia guttata GCF_048771995.1_bTaeGut7.mat 41 1,141,148,522 9 315,566 23.56
623 zebra finch (alternate hap Black17 2018) Taeniopygia guttata GCA_003957525.1_bTaeGut1_v1.h 5,336 965,644,423 45 136,365 20.33
624 zebra finch (alternate hap Blue55 v1 2020) Taeniopygia guttata GCA_009859025.1_bTaeGut2.p.v1.alt 4,677 947,919,714 16 113,756 19.27
625 zebra finch (Black17 v1.4 alternate hap 2021) Taeniopygia guttata GCA_003957525.2_bTaeGut1.4.alt 1,646 887,567,949 10 876 20.75
626 zebra finch (Blue55 female 2020 genbank) Taeniopygia guttata GCA_009859065.2_bTaeGut2.pri.v2 541 1,106,297,559 789 21,820,589 20.08
627 zebra finch (Blue55 paternal 2019) Taeniopygia guttata GCA_008822125.1_bTaeGut2pat 202 1,047,569,904 828 20,734,162 20.05
628 zebra finch (Blue55 paternal W 2020) Taeniopygia guttata GCF_008822105.2_bTaeGut2.pat.W.v2 205 1,068,988,106 857 21,568,737 20.18
629 zebra finch (bTaeGut7 maternal hap 2025) Taeniopygia guttata GCA_048771995.1_bTaeGut7.mat 42 1,141,165,377 9 315,566 23.56
630 zebra finch (bTaeGut7 paternal hap 2025) Taeniopygia guttata GCA_048772025.1_bTaeGut7.pat 39 1,021,668,102 2 100,033 22.87
631 zebra finch (v1.4 Blue55 female primary hap 2021 refseq) Taeniopygia guttata GCF_003957565.2_bTaeGut1.4.pri 199 1,056,271,262 352 3,634,788 20.99
632 zebra finch (v3 Blue55 maternal 2020) Taeniopygia guttata GCA_008822115.3_bTaeGut2.mat.v3 206 995,952,786 583 15,480,445 20.34
TOTALS:total assembly count 632 3,295,327 753,182,446,201 26,701,755 4,430,262,062  

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 627 assemblies assembly stats track stats
Mammals 986 assemblies assembly stats track stats
Birds 632 assemblies assembly stats track stats
Fishes 875 assemblies assembly stats track stats
other vertebrates 520 assemblies assembly stats track stats
Invertebrates 1999 assemblies assembly stats track stats
Plants 466 assemblies assembly stats track stats
Fungi 4136 assemblies assembly stats track stats
Viruses 15117 assemblies assembly stats track stats
Archaea 2977 assemblies assembly stats track stats
Bacteria 23960 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5522 assemblies assembly stats track stats