| 1 |
aardvark (SDZICR_OR568_19922 2012 Broad)[IGV] |
Orycteropus afer afer |
GCF_000298275.1_OryAfe1.0 |
SAMN00744890 |
PRJNA74587 |
2012-09-20 |
| 2 |
African grass rat (maternal 2020)[IGV] |
Arvicanthis niloticus |
GCA_011750645.1_mArvNil1.mat |
SAMN12611849 |
PRJNA561936 |
2020-03-25 |
| 3 |
African grass rat (paternal 2020)[IGV] |
Arvicanthis niloticus |
GCA_011762545.1_mArvNil1.pat |
SAMN12611849 |
PRJNA561935 |
2020-03-25 |
| 4 |
African grass rat (paternal X 2020)[IGV] |
Arvicanthis niloticus |
GCF_011762505.1_mArvNil1.pat.X |
SAMN12611849 |
PRJNA608735 |
2020-03-27 |
| 5 |
African hunting dog[IGV] |
Lycaon pictus |
GCA_001887905.1_LycPicSAfr1.0 |
SAMN04312208 |
PRJNA304992 |
2016-12-01 |
| 6 |
African hunting dog (LycPic1hap1 2024)[IGV] |
Lycaon pictus |
GCA_040955645.1_LycPic1.final.hap1 |
SAMN36939365 |
PRJNA1099603 |
2024-08-01 |
| 7 |
African hunting dog (LycPic1hap2 2024)[IGV] |
Lycaon pictus |
GCA_040955705.1_LycPic1.final.hap2 |
SAMN36939365 |
PRJNA1099604 |
2024-08-01 |
| 8 |
African savanna elephant (2009 refseq)[IGV] |
Loxodonta africana |
GCF_000001905.1_Loxafr3.0 |
SAMN02953622 |
PRJNA12569 |
2009-07-15 |
| 9 |
African savanna elephant (hap1 mLoxAfr1 2023)[IGV] |
Loxodonta africana |
GCA_030020305.1_mLoxAfr1.hap1 |
SAMN32756554 |
PRJNA924321 |
2023-05-15 |
| 10 |
African savanna elephant (hap2 2023)[IGV] |
Loxodonta africana |
GCF_030014295.1_mLoxAfr1.hap2 |
SAMN32756554 |
PRJNA924322 |
2023-05-16 |
| 11 |
African savanna elephant (hap2 mLoxAfr1 2023)[IGV] |
Loxodonta africana |
GCA_030014295.1_mLoxAfr1.hap2 |
SAMN32756554 |
PRJNA924322 |
2023-05-16 |
| 12 |
agile gracile mouse opossum[IGV] |
Gracilinanus agilis |
GCF_016433145.1_AgileGrace |
SAMN16807781 |
PRJNA565840 |
2021-01-06 |
| 13 |
alpaca (v3.2 Carlotta AHFN-0088 2019 Deakin U)[IGV] |
Vicugna pacos |
GCF_000164845.4_VicPac3.2 |
SAMN01096418 |
PRJNA544883 |
2019-07-15 |
| 14 |
Alpine marmot (2019)[IGV] |
Marmota marmota marmota |
GCF_001458135.2_marMar |
SAMEA3214822 |
PRJEB8272 |
2019-12-18 |
| 15 |
Alvarez's mastiff bat (A012 2023)[IGV] |
Molossus alvarezi |
GCA_031001765.1_BBF_mMolAlv_v1 |
SAMN31836526 |
PRJNA944206 |
2023-08-30 |
| 16 |
Alvarez's mastiff bat (hap1 2024)[IGV] |
Molossus alvarezi |
GCA_037157525.1_mMolAlv2.hap1 |
SAMN40002245 |
PRJNA1080661 |
2024-03-15 |
| 17 |
Alvarez's mastiff bat (hap2 2024)[IGV] |
Molossus alvarezi |
GCA_037176705.1_mMolAlv2.hap2 |
SAMN40002245 |
PRJNA1080660 |
2024-03-15 |
| 18 |
American beaver (Ward 2017 refseq)[IGV] |
Castor canadensis |
GCF_001984765.1_C.can_genome_v1.0 |
SAMN06187566 |
PRJNA359140 |
2017-02-04 |
| 19 |
American bison (2014 refseq)[IGV] |
Bison bison bison |
GCF_000754665.1_Bison_UMD1.0 |
SAMN02947321 |
PRJNA257088 |
2014-10-08 |
| 20 |
American black bear (L20-20 alternate hap 2022)[IGV] |
Ursus americanus |
GCA_024610745.1_mUrsAme1.0.a |
SAMN29046565 |
PRJNA851482 |
2022-08-10 |
| 21 |
American black bear (L20-20 primary hap 2022)[IGV] |
Ursus americanus |
GCA_024610735.1_mUrsAme1.0.p |
SAMN29046565 |
PRJNA851483 |
2022-08-10 |
| 22 |
American black bear (UA15103 2021)[IGV] |
Ursus americanus |
GCF_020975775.1_gsc_jax_bbear_1.0 |
SAMN22511336 |
PRJNA319796 |
2021-11-24 |
| 23 |
American mink (2018)[IGV] |
Neogale vison |
GCA_900108605.1_NNQGG.v01 |
SAMEA4493372 |
PRJEB15663 |
2018-01-02 |
| 24 |
American mink (hap1 2024)[IGV] |
Neogale vison |
GCA_964106545.1_mNeoVis2.hap1.1 |
SAMEA112468126 |
PRJEB76007 |
2024-06-06 |
| 25 |
American mink (hap2 2024)[IGV] |
Neogale vison |
GCA_964106205.1_mNeoVis2.hap2.1 |
SAMEA112468126 |
PRJEB76008 |
2024-06-06 |
| 26 |
American mink (M4711 2021 Dalhousie U)[IGV] |
Neogale vison |
GCF_020171115.1_ASM_NN_V1 |
SAMN19764019 |
PRJNA741394 |
2021-09-29 |
| 27 |
American pika (hap1 2023)[IGV] |
Ochotona princeps |
GCF_030435755.1_mOchPri1.hap1 |
SAMN35822658 |
PRJNA986273 |
2023-07-13 |
| 28 |
American pika (hap2 2023)[IGV] |
Ochotona princeps |
GCA_030435715.1_mOchPri1.hap2 |
SAMN35822658 |
PRJNA986274 |
2023-07-13 |
| 29 |
American pika 3.0 (2012 Broad refseq)[IGV] |
Ochotona princeps |
GCF_000292845.1_OchPri3.0 |
SAMN00767999 |
PRJNA74593 |
2012-08-27 |
| 30 |
American pika 4.0 (UAM:Mamm:113957 2020)[IGV] |
Ochotona princeps |
GCF_014633375.1_OchPri4.0 |
SAMN15664588 |
PRJNA649356 |
2020-09-21 |
| 31 |
Amur tiger (TaeGuk 2013 refseq)[IGV] |
Panthera tigris altaica |
GCF_000464555.1_PanTig1.0 |
SAMN02086964 |
PRJNA182708 |
2013-09-06 |
| 32 |
Antarctic minke whale[IGV] |
Balaenoptera bonaerensis |
GCA_000978805.1_ASM97880v1 |
SAMD00016608 |
PRJDB1465 |
2015-03-18 |
| 33 |
Antillean ghost-faced bat[IGV] |
Mormoops blainvillei |
GCA_004026545.1_MorMeg_v1_BIUU |
SAMN07678133 |
PRJNA399472 |
2019-01-16 |
| 34 |
aoudad[IGV] |
Ammotragus lervia |
GCA_002201775.1_ALER1.0 |
SAMN06233879 |
PRJNA438286 |
2017-06-20 |
| 35 |
Arabian camel (Drom800 2019 refseq)[IGV] |
Camelus dromedarius |
GCF_000803125.2_CamDro3 |
SAMN03252735 |
PRJNA269274 |
2019-10-07 |
| 36 |
Arabian camel (hap2 2024)[IGV] |
Camelus dromedarius |
GCA_036321565.1_mCamDro1.hap2 |
SAMN39296380 |
PRJNA1064427 |
2024-01-31 |
| 37 |
Arabian camel (mCamDro1 2024)[IGV] |
Camelus dromedarius |
GCF_036321535.1_mCamDro1.pat |
SAMN39296380 |
PRJNA1064426 |
2024-01-31 |
| 38 |
Arabian camel (paternal 2024)[IGV] |
Camelus dromedarius |
GCA_036321535.1_mCamDro1.pat |
SAMN39296380 |
PRJNA1064426 |
2024-01-31 |
| 39 |
Arctic fox (Blue_001 2021 refseq)[IGV] |
Vulpes lagopus |
GCF_018345385.1_ASM1834538v1 |
SAMN16815335 |
PRJNA678849 |
2021-05-12 |
| 40 |
Arctic ground squirrel[IGV] |
Urocitellus parryii |
GCF_003426925.1_ASM342692v1 |
SAMN09469529 |
PRJNA477386 |
2018-08-24 |
| 41 |
Asian palm civet[IGV] |
Paradoxurus hermaphroditus |
GCA_004024585.1_ParHer_v1_BIUU |
SAMN07678048 |
PRJNA399364 |
2019-01-15 |
| 42 |
Asiatic elephant (mEleMax1 alternate hap 2022)[IGV] |
Elephas maximus indicus |
GCA_024166345.1_mEleMax1_alternate_haplotype |
SAMN29174328 |
PRJNA850270 |
2022-07-05 |
| 43 |
Asiatic elephant (mEleMax1 primary hap 2022)[IGV] |
Elephas maximus indicus |
GCF_024166365.1_mEleMax1_primary_haplotype |
SAMN29174328 |
PRJNA850184 |
2022-07-06 |
| 44 |
Asiatic mouflon (Amuf_v1 2020)[IGV] |
Ovis orientalis |
GCA_014523465.1_CAU_Oori_1.0 |
SAMN15835291 |
PRJNA529571 |
2020-09-11 |
| 45 |
Asiatic tapir (hap1 2023)[IGV] |
Tapirus indicus |
GCA_031878655.1_mTapInd1.hap1 |
SAMN37096863 |
PRJNA1010471 |
2023-09-25 |
| 46 |
Asiatic tapir (hap2 2023)[IGV] |
Tapirus indicus |
GCA_031878705.1_mTapInd1.hap2 |
SAMN37096863 |
PRJNA1010472 |
2023-09-25 |
| 47 |
ass (Dezhou 2021)[IGV] |
Equus asinus |
GCF_016077325.2_ASM1607732v2 |
SAMN08939908 |
PRJNA431818 |
2021-10-14 |
| 48 |
ass (Maral har 2015 refseq)[IGV] |
Equus asinus |
GCF_001305755.1_ASM130575v1 |
SAMN03010633 |
PRJNA259598 |
2015-10-02 |
| 49 |
Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024)[IGV] |
Lagenorhynchus acutus |
GCA_964270905.1_mLagAcu1.hap1.1 |
SAMEA114493133 |
PRJEB80626 |
2024-09-29 |
| 50 |
Atlantic white-sided dolphin (mLagAcu1.hap2.1 2024)[IGV] |
Lagenorhynchus acutus |
GCA_964270935.1_mLagAcu1.hap2.1 |
SAMEA114493133 |
PRJEB80627 |
2024-09-30 |
| 51 |
Australian echidna (mTacAcu1 alternate hap 2020)[IGV] |
Tachyglossus aculeatus |
GCA_015852515.1_mTacAcu1.alt |
SAMN12634963 |
PRJNA607238 |
2020-12-08 |
| 52 |
Australian echidna (mTacAcu1 primary hap 2020)[IGV] |
Tachyglossus aculeatus |
GCF_015852505.1_mTacAcu1.pri |
SAMN12634963 |
PRJNA607237 |
2020-12-09 |
| 53 |
Bactrian camel (Alxa 2014 refseq)[IGV] |
Camelus bactrianus |
GCF_000767855.1_Ca_bactrianus_MBC_1.0 |
SAMN02953968 |
PRJNA183605 |
2014-10-23 |
| 54 |
banded mongoose[IGV] |
Mungos mungo |
GCA_004023785.1_MunMun_v1_BIUU |
SAMN07678097 |
PRJNA399406 |
2019-01-15 |
| 55 |
bank vole[IGV] |
Myodes glareolus |
GCF_902806735.1_Bank_vole1_10x |
SAMEA5971946 |
PRJEB34572 |
2020-02-22 |
| 56 |
banner-tailed kangaroo rat[IGV] |
Dipodomys spectabilis |
GCF_019054845.1_ASM1905484v1 |
SAMN19232064 |
PRJNA730493 |
2021-06-29 |
| 57 |
banteng 2023[IGV] |
Bos javanicus |
GCF_032452875.1_ARS-OSU_banteng_1.0 |
SAMN35998690 |
PRJNA988033 |
2023-10-11 |
| 58 |
bats A.intermedius (hap1 2024)[IGV] |
Artibeus intermedius |
GCA_038363145.1_mArtInt1.hap1 |
SAMN40002248 |
PRJNA1080656 |
2024-04-22 |
| 59 |
bats A.intermedius (hap2 2024)[IGV] |
Artibeus intermedius |
GCA_038363225.1_mArtInt1.hap2 |
SAMN40002248 |
PRJNA1080655 |
2024-04-22 |
| 60 |
beluga whale (Cook Inlet, Alaska, USA DL-CIB17-05 2020)[IGV] |
Delphinapterus leucas |
GCA_009917745.1_GSC_cook_1.0 |
SAMN12238539 |
PRJNA553680 |
2020-01-07 |
| 61 |
beluga whale (GAN/ISIS: 26980492/103006 v3 2019)[IGV] |
Delphinapterus leucas |
GCF_002288925.2_ASM228892v3 |
SAMN06216270 |
PRJNA360851 |
2019-08-29 |
| 62 |
big brown bat (BU_THK_EF1 2012)[IGV] |
Eptesicus fuscus |
GCF_000308155.1_EptFus1.0 |
SAMN00767986 |
PRJNA72449 |
2012-11-08 |
| 63 |
big brown bat (TK198812 2023)[IGV] |
Eptesicus fuscus |
GCF_027574615.1_DD_ASM_mEF_20220401 |
SAMN30608903 |
PRJNA868286 |
2023-01-09 |
| 64 |
bighorn sheep (BS48 2019)[IGV] |
Ovis canadensis |
GCA_004026945.1_OviCan_v1_BIUU |
SAMN07678102 |
PRJNA399410 |
2019-01-16 |
| 65 |
bilby (mMagLag1 2024)[IGV] |
Macrotis lagotis |
GCA_037893015.1_bilby.v1.9.chrom.fasta |
SAMN39300766 |
PRJNA1049866 |
2024-04-04 |
| 66 |
black and rufous elephant shrew (mRhyPet1hap1 2024)[IGV] |
Rhynchocyon petersi |
GCA_043290085.1_mRhyPet1.hap1 |
SAMN43274963 |
PRJNA1150232 |
2024-10-17 |
| 67 |
black and rufous elephant shrew (mRhyPet1hap2 2024)[IGV] |
Rhynchocyon petersi |
GCA_043290065.1_mRhyPet1.hap2 |
SAMN43274963 |
PRJNA1150233 |
2024-10-17 |
| 68 |
black flying fox[IGV] |
Pteropus alecto |
GCF_000325575.1_ASM32557v1 |
SAMN01103203 |
PRJNA171993 |
2013-12-04 |
| 69 |
black rat[IGV] |
Rattus rattus |
GCF_011064425.1_Rrattus_CSIRO_v1 |
SAMN12855339 |
PRJNA574245 |
2020-03-04 |
| 70 |
black rhinoceros (BS38 2019 Broad)[IGV] |
Diceros bicornis |
GCA_004027315.1_DicBicMic_v1_BIUU |
SAMN07678078 |
PRJNA399388 |
2019-01-16 |
| 71 |
black rhinoceros (mBicDic1 alternate hap 2021)[IGV] |
Diceros bicornis minor |
GCA_020826835.1_mDicBic1.pat.decon |
SAMN22047685 |
PRJNA773943 |
2021-11-10 |
| 72 |
black rhinoceros (mBicDic1 primary hap 2021)[IGV] |
Diceros bicornis minor |
GCF_020826845.1_mDicBic1.mat.cur |
SAMN22047685 |
PRJNA773944 |
2021-11-10 |
| 73 |
black-footed cat[IGV] |
Felis nigripes |
GCA_004023925.1_FelNig_v1_BIUU |
SAMN07678084 |
PRJNA399394 |
2019-01-15 |
| 74 |
black-footed ferret (SB6536 2022)[IGV] |
Mustela nigripes |
GCF_022355385.1_MUSNIG.SB6536 |
SAMN15012758 |
PRJNA634921 |
2022-02-24 |
| 75 |
black-lipped pika[IGV] |
Ochotona curzoniae |
GCF_017591425.1_NIBS_Ocur_1.0 |
SAMN13876228 |
PRJNA601872 |
2021-03-26 |
| 76 |
Blainville's beaked whale (alternate hap 2022)[IGV] |
Mesoplodon densirostris |
GCA_025094165.1_mMesDen1_alternate_haplotype |
SAMN29828597 |
PRJNA873679 |
2022-09-08 |
| 77 |
Blainville's beaked whale (primary hap 2022 refseq)[IGV] |
Mesoplodon densirostris |
GCF_025265405.1_mMesDen1_primary_haplotype |
SAMN29828597 |
PRJNA873668 |
2022-09-19 |
| 78 |
blue whale (alternate hap JJ_BM4_2016_0621 2019)[IGV] |
Balaenoptera musculus |
GCA_008658375.1_mBalMus1_alternate |
SAMN12287136 |
PRJNA554523 |
2019-09-23 |
| 79 |
Blue whale (JJ_BM4_2016_0621 v2 alternate hap 2020)[IGV] |
Balaenoptera musculus |
GCA_008658375.2_mBalMus1.alt.v2 |
SAMN12287136 |
PRJNA554523 |
2020-09-30 |
| 80 |
blue whale (JJ_BM4_2016_0621 v3 primary hap 2020)[IGV] |
Balaenoptera musculus |
GCF_009873245.2_mBalMus1.pri.v3 |
SAMN12287136 |
PRJNA554522 |
2020-10-02 |
| 81 |
bobcat (Redwood Valley CCGP_SWC_20201006 alternate hap 2022)[IGV] |
Lynx rufus |
GCA_022079275.1_mLynRuf1.a |
SAMN23391104 |
PRJNA782956 |
2022-02-08 |
| 82 |
bobcat (Redwood Valley CCGP_SWC_20201006 primary hap 2022)[IGV] |
Lynx rufus |
GCF_022079265.1_mLynRuf1.p |
SAMN23391104 |
PRJNA782957 |
2022-02-08 |
| 83 |
boreal woodland reindeer (boreal CA-31 2023)[IGV] |
Rangifer tarandus caribou |
GCA_019903745.2_ULRtarCaribou_2v2 |
SAMN19775459 |
PRJNA739179 |
2023-04-17 |
| 84 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 alternate hap 2022)[IGV] |
Thomomys bottae |
GCA_024803775.1_mThoBot1.0.a |
SAMN29044214 |
PRJNA851165 |
2022-08-31 |
| 85 |
Botta's pocket gopher (bottae MVZ:Mamm:240275 primary hap 2022)[IGV] |
Thomomys bottae |
GCA_024803745.1_mThoBot1.0.p |
SAMN29044214 |
PRJNA851166 |
2022-09-01 |
| 86 |
Botta's pocket gopher (hap1 2023)[IGV] |
Thomomys bottae |
GCA_031878675.1_mThoBot2.hap1 |
SAMN37300244 |
PRJNA1013538 |
2023-09-25 |
| 87 |
Botta's pocket gopher (hap2 2023)[IGV] |
Thomomys bottae |
GCA_031878665.1_mThoBot2.hap2 |
SAMN37300244 |
PRJNA1013537 |
2023-09-25 |
| 88 |
boutu (hap1 2024)[IGV] |
Inia geoffrensis |
GCA_036417435.1_mIniGeo1.hap1 |
SAMN32797734 |
PRJNA925497 |
2024-02-06 |
| 89 |
boutu (hap2 2024)[IGV] |
Inia geoffrensis |
GCA_036417475.1_mIniGeo1.hap2 |
SAMN32797734 |
PRJNA925498 |
2024-02-06 |
| 90 |
Brandt's bat[IGV] |
Myotis brandtii |
GCF_000412655.1_ASM41265v1 |
SAMN01801565 |
PRJNA178678 |
2013-06-28 |
| 91 |
Brazilian free-tailed bat (primary hap 2023)[IGV] |
Tadarida brasiliensis |
GCA_030848825.1_DD_mTadBra1_pri |
SAMN35075070 |
PRJNA972445 |
2023-08-22 |
| 92 |
Brazilian guinea pig[IGV] |
Cavia aperea |
GCA_000688575.1_CavAp1.0 |
SAMN02252454 |
PRJNA212237 |
2014-01-21 |
| 93 |
Brazilian tapir[IGV] |
Tapirus terrestris |
GCA_004025025.1_TapTer_v1_BIUU |
SAMN07678114 |
PRJNA399422 |
2019-01-15 |
| 94 |
brown bear (GAN/ISIS:MIG12 v2 2018)[IGV] |
Ursus arctos horribilis |
GCF_003584765.2_ASM358476v2 |
SAMN09907428 |
PRJNA487641 |
2018-09-20 |
| 95 |
brown bear (v2.0 North America Adak 2023)[IGV] |
Ursus arctos |
GCF_023065955.2_UrsArc2.0 |
SAMN25977855 |
PRJNA807323 |
2023-05-22 |
| 96 |
brown big-eared bat (primary hap 2023)[IGV] |
Plecotus auritus |
GCA_963455305.1_mPleAur1.1 |
SAMEA110056142 |
PRJEB65991 |
2023-09-20 |
| 97 |
brown-throated sloth[IGV] |
Bradypus variegatus |
GCA_004027775.1_BraVar_v1_BIUU |
SAMN07678054 |
PRJNA399370 |
2019-01-16 |
| 98 |
cactus mouse (2023)[IGV] |
Peromyscus eremicus |
GCF_949786415.1_PerEre_H2_v1 |
SAMEA112839419 |
PRJEB60916 |
2023-04-08 |
| 99 |
California mouse (IS 2022)[IGV] |
Peromyscus californicus insignis |
GCF_007827085.1_ASM782708v3 |
SAMN10698868 |
PRJNA513219 |
2022-04-27 |
| 100 |
California sea lion (alternate hap 2019)[IGV] |
Zalophus californianus |
GCA_009762295.1_mZalCal1.alt |
SAMN12368149 |
PRJNA559674 |
2019-12-17 |
| 101 |
California sea lion (LMU 2018 refseq)[IGV] |
Zalophus californianus |
GCF_900631625.1_zalCal2.2 |
SAMEA5145493 |
PRJEB30031 |
2018-12-07 |
| 102 |
California sea lion (mZalCal1 alternate hap 2020)[IGV] |
Zalophus californianus |
GCA_009762295.2_mZalCal1.alt.v2 |
SAMN12368149 |
PRJNA559674 |
2020-06-12 |
| 103 |
California sea lion (v2 primary hap 2020)[IGV] |
Zalophus californianus |
GCF_009762305.2_mZalCal1.pri.v2 |
SAMN12368149 |
PRJNA559673 |
2020-07-14 |
| 104 |
California vole (kernensis MVZ Mamm 240107 alternate hap 2023)[IGV] |
Microtus californicus |
GCA_028537755.1_mMicCal1.0.hap2 |
SAMN31837211 |
PRJNA904289 |
2023-02-07 |
| 105 |
California vole (kernensis MVZ Mamm 240107 primary hap 2023)[IGV] |
Microtus californicus |
GCA_028537955.1_mMicCal1.0.hap1 |
SAMN31837211 |
PRJNA904290 |
2023-02-07 |
| 106 |
Canada lynx (alternate hap LIC74 2019)[IGV] |
Lynx canadensis |
GCA_007474575.1_mLynCan4_v1.alt |
SAMN09948483 |
PRJNA489108 |
2019-07-25 |
| 107 |
Canada lynx (LIC74 v2 alternate hap 2020)[IGV] |
Lynx canadensis |
GCA_007474575.2_mLynCan4.alt.v2 |
SAMN09948483 |
PRJNA489108 |
2020-06-12 |
| 108 |
Canada lynx (LIC74 v2 primary hap 2020)[IGV] |
Lynx canadensis |
GCF_007474595.2_mLynCan4.pri.v2 |
SAMN09948483 |
PRJNA489107 |
2020-07-14 |
| 109 |
Cantor's roundleaf bat[IGV] |
Hipposideros galeritus |
GCA_004027415.1_HipGal_v1_BIUU |
SAMN07678026 |
PRJNA399442 |
2019-01-16 |
| 110 |
Cape elephant shrew[IGV] |
Elephantulus edwardii |
GCF_000299155.1_EleEdw1.0 |
SAMN00749966 |
PRJNA74589 |
2012-10-10 |
| 111 |
Cape golden mole (2012 Broad)[IGV] |
Chrysochloris asiatica |
GCF_000296735.1_ChrAsi1.0 |
SAMN00744889 |
PRJNA74591 |
2012-09-19 |
| 112 |
Cape rock hyrax (US060 2019 Broad)[IGV] |
Procavia capensis |
GCA_004026925.1_ProCapCap_v1_BIUU |
SAMN07678107 |
PRJNA399414 |
2019-01-16 |
| 113 |
capybara[IGV] |
Hydrochoerus hydrochaeris |
GCA_004027455.1_HydHyd_v1_BIUU |
SAMN07678143 |
PRJNA399400 |
2019-01-16 |
| 114 |
carabao (swamp buffalo K-KA32 2023)[IGV] |
Bubalus kerabau |
GCF_029407905.1_PCC_UOA_SB_1v2 |
SAMN31703457 |
PRJNA901059 |
2023-03-31 |
| 115 |
cattle (Hereford L1 Dominette 01449 42190680 v2.0 2023 USDA)[IGV] |
Bos taurus |
GCF_002263795.3_ARS-UCD2.0 |
n/a |
PRJNA391427 |
2023-07-01 |
| 116 |
cattle (Hereford UMD_3.1.1 2014)[IGV] |
Bos taurus |
GCF_000003055.6_Bos_taurus_UMD_3.1.1 |
SAMN02898106 |
PRJNA32899 |
2014-11-25 |
| 117 |
Chacoan peccary (BS20 v2 2019 Broad)[IGV] |
Catagonus wagneri |
GCA_004024745.2_CatWag_v2_BIUU_UCD |
SAMN07678067 |
PRJNA399378 |
2019-07-15 |
| 118 |
cheetah (Ajub_Pintada_27869175 2022)[IGV] |
Acinonyx jubatus |
GCF_027475565.1_VMU_Ajub_asm_v1.0 |
SAMN29432198 |
PRJNA854353 |
2022-12-28 |
| 119 |
cheetah (Rico 2018)[IGV] |
Acinonyx jubatus |
GCF_003709585.1_Aci_jub_2 |
SAMN09699341 |
PRJNA482183 |
2018-10-22 |
| 120 |
Chinese forest musk deer (Sichuan 2022)[IGV] |
Moschus berezovskii |
GCF_022376915.1_ASM2237691v1 |
SAMN20589840 |
PRJNA752261 |
2022-02-23 |
| 121 |
Chinese hamster (17A/GY CHO 2020)[IGV] |
Cricetulus griseus |
GCF_003668045.3_CriGri-PICRH-1.0 |
SAMN07140313 |
PRJNA389969 |
2020-06-11 |
| 122 |
Chinese hamster (CHO v1 2011 BGI)[IGV] |
Cricetulus griseus |
GCF_000223135.1_CriGri_1.0 |
SAMN02981352 |
PRJNA69991 |
2011-08-23 |
| 123 |
Chinese hamster (CHO v2 2017 Eagle Genomics Ltd)[IGV] |
Cricetulus griseus |
GCA_900186095.1_CHOK1S_HZDv1 |
SAMEA104116709 |
PRJEB21211 |
2017-06-30 |
| 124 |
Chinese hamster (CHO-K1 CHOZN v2.4 2022)[IGV] |
Cricetulus griseus |
GCA_026545065.1_CHOZN_v2.4 |
SAMN29793812 |
PRJNA859676 |
2022-11-30 |
| 125 |
Chinese pangolin (2020 Yunnan U)[IGV] |
Manis pentadactyla |
GCF_014570555.1_YNU_ManPten_2.0 |
SAMN11464812 |
PRJNA529513 |
2020-09-15 |
| 126 |
Chinese pangolin (hap1 mManPen7 2023)[IGV] |
Manis pentadactyla |
GCF_030020395.1_mManPen7.hap1 |
SAMN32757332 |
PRJNA924339 |
2023-05-23 |
| 127 |
Chinese pangolin (hap2 mManPen7 2023)[IGV] |
Manis pentadactyla |
GCA_030020945.1_mManPen7.hap2 |
SAMN32757332 |
PRJNA924340 |
2023-05-16 |
| 128 |
Chinese pangolin (MPE899 2014 WashU)[IGV] |
Manis pentadactyla |
GCA_000738955.1_M_pentadactyla-1.1.1 |
SAMN01943338 |
PRJNA20331 |
2014-08-11 |
| 129 |
Chinese rufous horseshoe bat[IGV] |
Rhinolophus sinicus |
GCA_001888835.1_ASM188883v1 |
SAMN04038064 |
PRJNA294852 |
2016-12-04 |
| 130 |
Chinese tree shrew[IGV] |
Tupaia chinensis |
GCF_000334495.1_TupChi_1.0 |
SAMN01084043 |
PRJNA169406 |
2013-01-31 |
| 131 |
chiru[IGV] |
Pantholops hodgsonii |
GCA_000400835.1_PHO1.0 |
SAMN00990743 |
PRJNA72465 |
2013-05-28 |
| 132 |
clouded leopard (mNeoNeb1 alternate hap 2023)[IGV] |
Neofelis nebulosa |
GCA_028018655.1_mNeoNeb1.alt |
SAMN31801981 |
PRJNA915743 |
2023-01-26 |
| 133 |
clouded leopard (mNeoNeb1 primary hap 2023 refseq)[IGV] |
Neofelis nebulosa |
GCF_028018385.1_mNeoNeb1.pri |
SAMN31801981 |
PRJNA915742 |
2023-01-31 |
| 134 |
common bottlenose dolphin (maternal 2020)[IGV] |
Tursiops truncatus |
GCA_011762535.1_mTurTru1.mat |
SAMN12326775 |
PRJNA561885 |
2020-03-25 |
| 135 |
common bottlenose dolphin (maternal Y refseq 2020)[IGV] |
Tursiops truncatus |
GCF_011762595.1_mTurTru1.mat.Y |
SAMN12326775 |
PRJNA608726 |
2020-03-27 |
| 136 |
common bottlenose dolphin (MMES2002162SC 2016 refseq)[IGV] |
Tursiops truncatus |
GCF_001922835.1_NIST_Tur_tru_v1 |
SAMN06114300 |
PRJNA356464 |
2016-12-28 |
| 137 |
common bottlenose dolphin (paternal 2020)[IGV] |
Tursiops truncatus |
GCA_011762515.1_mTurTru1.pat |
SAMN12326775 |
PRJNA561884 |
2020-03-25 |
| 138 |
common brushtail (alternate hap 2020)[IGV] |
Trichosurus vulpecula |
GCA_011100645.1_mTriVul1.alt |
SAMN12629507 |
PRJNA562013 |
2020-03-09 |
| 139 |
common brushtail (refseq 2020)[IGV] |
Trichosurus vulpecula |
GCF_011100635.1_mTriVul1.pri |
SAMN12629507 |
PRJNA562014 |
2020-03-10 |
| 140 |
common pipistrelle (2020)[IGV] |
Pipistrellus pipistrellus |
GCA_903992545.1_mPipPip1.1 |
SAMEA994724 |
PRJEB39564 |
2020-08-06 |
| 141 |
common pipistrelle (alternate hap 2020)[IGV] |
Pipistrellus pipistrellus |
GCA_903992515.1_mPipPip1.1_alternate_haplotype |
SAMEA994724 |
PRJEB39565 |
2020-08-04 |
| 142 |
common pipistrelle (Broad 2019)[IGV] |
Pipistrellus pipistrellus |
GCA_004026625.1_PipPip_v1_BIUU |
SAMN07678120 |
PRJNA399427 |
2019-01-16 |
| 143 |
common vampire bat (HL8 alternate hap 2022)[IGV] |
Desmodus rotundus |
GCA_022682395.1_HLdesRot8B |
SAMN24116476 |
PRJNA789527 |
2022-03-24 |
| 144 |
common vampire bat (HL8 alternate hap 2022)[IGV] |
Desmodus rotundus |
GCA_022682395.2_HLdesRot8B.1 |
SAMN24116476 |
PRJNA789527 |
2022-03-24 |
| 145 |
common vampire bat (HL8 primary hap 2022 refseq)[IGV] |
Desmodus rotundus |
GCF_022682495.1_HLdesRot8A |
SAMN24116476 |
PRJNA789528 |
2022-03-24 |
| 146 |
common vampire bat (v3 DRU21DN04 2018)[IGV] |
Desmodus rotundus |
GCF_002940915.2_ASM294091v3 |
SAMN07783852 |
PRJNA414273 |
2018-02-23 |
| 147 |
common warthog (WHEZ1 2021)[IGV] |
Phacochoerus africanus |
GCF_016906955.1_ROS_Pafr_v1 |
SAMN15809474 |
PRJNA656957 |
2021-02-19 |
| 148 |
common wombat[IGV] |
Vombatus ursinus |
GCF_900497805.2_bare-nosed_wombat_genome_assembly |
SAMEA4791334 |
PRJEB27783 |
2018-12-10 |
| 149 |
Corsac fox (zsh2022 2023)[IGV] |
Vulpes corsac |
GCA_030463245.1_zhanglab2022 |
SAMN30841973 |
PRJNA880477 |
2023-07-18 |
| 150 |
coyote (coyote_06102 2023)[IGV] |
Canis latrans |
GCA_034620425.1_Cla-1 |
SAMN34121417 |
PRJNA953635 |
2023-12-27 |
| 151 |
creeping vole[IGV] |
Microtus oregoni |
GCF_018167655.1_Mior012 |
SAMN18478481 |
PRJNA505851 |
2021-04-26 |
| 152 |
crested porcupine[IGV] |
Hystrix cristata |
GCA_004026905.1_HysCri_v1_BIUU |
SAMN07678090 |
PRJNA399401 |
2019-01-16 |
| 153 |
Cuvier's beaked whale[IGV] |
Ziphius cavirostris |
GCA_004364475.1_ZipCav_v1_BIUU |
SAMN07678128 |
PRJNA399469 |
2019-03-22 |
| 154 |
Damara mole-rat DMR 1.0 (2014 BGI)[IGV] |
Fukomys damarensis |
GCF_000743615.1_DMR_v1.0 |
SAMN02339281 |
PRJNA190641 |
2014-09-04 |
| 155 |
Damara mole-rat DMR 1.0 HiC (2020 DNA Zoo)[IGV] |
Fukomys damarensis |
GCF_012274545.1_DMR_v1.0_HiC |
SAMN10973724 |
PRJNA604608 |
2020-04-13 |
| 156 |
dassie-rat[IGV] |
Petromus typicus |
GCA_004026965.1_PetTyp_v1_BIUU |
SAMN07678021 |
PRJNA399347 |
2019-01-16 |
| 157 |
Daubenton's bat (alternate hap 2023)[IGV] |
Myotis daubentonii |
GCA_963242275.1_mMyoDau2.1_alternate_haplotype |
SAMEA9921455 |
PRJEB65247 |
2023-08-20 |
| 158 |
Daubenton's bat (primary hap 2023 refseq)[IGV] |
Myotis daubentonii |
GCF_963259705.1_mMyoDau2.1 |
SAMEA9921455 |
PRJEB65246 |
2023-08-20 |
| 159 |
Daurian ground squirrel[IGV] |
Spermophilus dauricus |
GCA_002406435.1_ASM240643v1 |
SAMN07711139 |
PRJNA215874 |
2017-09-28 |
| 160 |
David's myotis bat[IGV] |
Myotis davidii |
GCF_000327345.1_ASM32734v1 |
SAMN01103204 |
PRJNA171994 |
2012-12-20 |
| 161 |
degu (3935 2012 refseq)[IGV] |
Octodon degus |
GCF_000260255.1_OctDeg1.0 |
SAMN00769067 |
PRJNA74595 |
2012-05-01 |
| 162 |
desert hamster (2022)[IGV] |
Phodopus roborovskii |
GCF_943737965.1_PHOROB |
SAMEA9952654 |
PRJEB47530 |
2022-07-01 |
| 163 |
Desmarest's hutia[IGV] |
Capromys pilorides |
GCA_004027915.1_CapPil_v1_BIUU |
SAMN07678066 |
PRJNA399377 |
2019-01-16 |
| 164 |
dingo (2020 Alpine COOINDA U.NSW)[IGV] |
Canis lupus dingo |
GCF_012295265.1_UNSW_AlpineDingo_1.0 |
SAMN14395261 |
PRJNA613141 |
2020-04-15 |
| 165 |
dingo (Sandy 2020 James Cook U)[IGV] |
Canis lupus dingo |
GCF_003254725.2_ASM325472v2 |
SAMN09397198 |
PRJNA475652 |
2020-09-11 |
| 166 |
dog (Basenji MU ID 185726 2019)[IGV] |
Canis lupus familiaris |
GCA_004886185.2_Basenji_breed-1.1 |
SAMN10749847 |
PRJNA512874 |
2019-08-16 |
| 167 |
dog (Basenji UNSW-BAS-2019 2021)[IGV] |
Canis lupus familiaris |
GCA_013276365.2_UNSW_CanFamBas_1.2 |
SAMN14380863 |
PRJNA612738 |
2021-02-23 |
| 168 |
dog (Bernese Mountain Dog BD 2023)[IGV] |
Canis lupus familiaris |
GCA_031010765.1_BD_1.0 |
SAMN31138971 |
PRJNA886700 |
2023-08-31 |
| 169 |
dog (Bernese Mountain Dog OD 2023)[IGV] |
Canis lupus familiaris |
GCA_031010635.1_OD_1.0 |
SAMN31138972 |
PRJNA886700 |
2023-08-31 |
| 170 |
dog (boxer Tasha 2011)[IGV] |
Canis lupus familiaris |
GCF_000002285.3_CanFam3.1 |
SAMN02953603 |
PRJNA13179 |
2011-11-02 |
| 171 |
dog (boxer Tasha 2020)[IGV] |
Canis lupus familiaris |
GCF_000002285.5_Dog10K_Boxer_Tasha |
SAMN02953603 |
PRJNA13179 |
2020-10-06 |
| 172 |
dog (Cairn Terrier CA611 2023)[IGV] |
Canis lupus familiaris |
GCA_031010295.1_CA611_1.0 |
SAMN31138973 |
PRJNA886700 |
2023-08-31 |
| 173 |
dog (German shepard Mischka 2020)[IGV] |
Canis lupus familiaris |
GCF_011100685.1_UU_Cfam_GSD_1.0 |
SAMN13230619 |
PRJNA587469 |
2020-03-10 |
| 174 |
dog (German Shepherd Nala 2020)[IGV] |
Canis lupus familiaris |
GCA_008641055.3_ASM864105v3 |
SAMN12574852 |
PRJNA560310 |
2020-04-14 |
| 175 |
dog (Labrador retriever 2023)[IGV] |
Canis lupus familiaris |
GCA_031165255.1_Yella_v2 |
SAMN35774271 |
PRJNA984662 |
2023-09-07 |
| 176 |
dog (labrador SID07034 2020)[IGV] |
Canis lupus familiaris |
GCF_014441545.1_ROS_Cfam_1.0 |
SAMN14478636 |
PRJNA615959 |
2020-09-03 |
| 177 |
domestic cat (Abyssinian Cinnamon 2017 WashU)[IGV] |
Felis catus |
GCF_000181335.3_Felis_catus_9.0 |
SAMN02953640 |
PRJNA16726 |
2017-11-20 |
| 178 |
domestic cat (Abyssinian Cinnamon 2021 WashU)[IGV] |
Felis catus |
GCA_000181335.5_felCat9.1_X |
SAMN02953640 |
PRJNA16726 |
2021-10-01 |
| 179 |
domestic cat (Fca126 2021 Texas A&M U)[IGV] |
Felis catus |
GCF_018350175.1_F.catus_Fca126_mat1.0 |
SAMN19729387 |
PRJNA684600 |
2021-05-13 |
| 180 |
domestic ferret (JIRA1106 JCVI 2020)[IGV] |
Mustela putorius furo |
GCF_011764305.1_ASM1176430v1.1 |
SAMN13896405 |
PRJNA580247 |
2020-03-27 |
| 181 |
domestic ferret (Sable 2011 Broad)[IGV] |
Mustela putorius furo |
GCA_000239315.1_MusPutFurMale1.0 |
SAMN00761641 |
PRJNA78213 |
2011-12-21 |
| 182 |
domestic guinea pig (051 PalLab524CR 2023)[IGV] |
Cavia porcellus |
GCF_034190915.1_mCavPor4.1 |
SAMN37383695 |
PRJNA1016386 |
2023-12-07 |
| 183 |
domestic guinea pig (2N 2008 refseq)[IGV] |
Cavia porcellus |
GCF_000151735.1_Cavpor3.0 |
SAMN02981223 |
PRJNA12583 |
2008-03-03 |
| 184 |
domestic yak (maiwa yakHY00 2019)[IGV] |
Bos grunniens |
GCA_005887515.3_BosGru3.1 |
SAMN11569574 |
PRJNA540974 |
2019-06-10 |
| 185 |
dugong (hap1 mDugDug1 2023)[IGV] |
Dugong dugon |
GCA_030035585.1_mDugDug1.hap1 |
SAMN33212336 |
PRJNA932812 |
2023-05-18 |
| 186 |
dugong (hap2 mDugDug1 2023)[IGV] |
Dugong dugon |
GCA_030020955.1_mDugDug1.hap2 |
SAMN33212336 |
PRJNA932821 |
2023-05-16 |
| 187 |
dwarf mongoose[IGV] |
Helogale parvula |
GCA_004023845.1_HelPar_v1_BIUU |
SAMN07678086 |
PRJNA399396 |
2019-01-15 |
| 188 |
eastern cottontail (primary hap 2023)[IGV] |
Sylvilagus floridanus |
GCA_949820135.1_mSylFlo1.10 |
SAMEA13607423 |
PRJEB61298 |
2023-04-19 |
| 189 |
eastern European house mouse (PWK_PhJ v2 2022)[IGV] |
Mus musculus musculus |
GCA_921998335.2_PWK_PhJ_v3 |
SAMEA9544189 |
PRJEB47108 |
2022-07-01 |
| 190 |
eastern mole[IGV] |
Scalopus aquaticus |
GCA_004024925.1_ScaAqu_v1_BIUU |
SAMN07678045 |
PRJNA399361 |
2019-01-15 |
| 191 |
eastern quoll[IGV] |
Dasyurus viverrinus |
GCA_020854095.1_UniMelb_DasViv_v1.0 |
SAMN21032600 |
PRJNA758704 |
2021-11-12 |
| 192 |
Egyptian rousette (1219 2016 Boston U)[IGV] |
Rousettus aegyptiacus |
GCF_001466805.2_Raegyp2.0 |
SAMN04287759 |
PRJNA303181 |
2016-03-17 |
| 193 |
Egyptian rousette (v1 2020 refseq)[IGV] |
Rousettus aegyptiacus |
GCF_014176215.1_mRouAeg1.p |
SAMN14734550 |
PRJNA628585 |
2020-08-07 |
| 194 |
Egyptian spiny mouse[IGV] |
Acomys cahirinus |
GCA_004027535.1_AcoCah_v1_BIUU |
SAMN07678032 |
PRJNA399339 |
2019-01-16 |
| 195 |
elk (wapiti)[IGV] |
Cervus canadensis |
GCF_019320065.1_ASM1932006v1 |
SAMN15814149 |
PRJNA657053 |
2021-07-26 |
| 196 |
ermine (2020)[IGV] |
Mustela erminea |
GCF_009829155.1_mMusErm1.Pri |
SAMN12611999 |
PRJNA561931 |
2020-01-03 |
| 197 |
ermine (alternate hap 2020)[IGV] |
Mustela erminea |
GCA_009829165.1_mMusErm1.alt |
SAMN12611999 |
PRJNA561930 |
2020-01-03 |
| 198 |
Eurasian badger (2021)[IGV] |
Meles meles |
GCA_922990625.1_mMelMel3.1_maternal_haplotype_uncurated |
SAMEA7524400 |
PRJEB49352 |
2021-12-18 |
| 199 |
Eurasian badger (v3.2 2022)[IGV] |
Meles meles |
GCA_922984935.2_mMelMel3.2_paternal_haplotype |
SAMEA7524400 |
PRJEB49353 |
2022-03-23 |
| 200 |
Eurasian field mouse (2024)[IGV] |
Apodemus agrarius |
GCA_964023405.1_mApoAgr2.1 |
SAMEA112797479 |
PRJEB74496 |
2024-04-12 |
| 201 |
Eurasian red squirrel (alternate hap 2019)[IGV] |
Sciurus vulgaris |
GCA_902685485.1_mSciVul1.1_alternate_haplotype |
SAMEA994733 |
PRJEB35379 |
2019-11-26 |
| 202 |
Eurasian red squirrel (v1.2 2020)[IGV] |
Sciurus vulgaris |
GCA_902686455.2_mSciVul1.2 |
SAMEA994733 |
PRJEB35380 |
2020-07-31 |
| 203 |
Eurasian river otter (2020)[IGV] |
Lutra lutra |
GCF_902655055.1_mLutLut1.2 |
SAMEA994731 |
PRJEB35339 |
2020-07-31 |
| 204 |
Eurasian river otter (alternate hap 2019)[IGV] |
Lutra lutra |
GCA_902653095.1_mLutLut1.1_alternate_haplotype |
SAMEA994731 |
PRJEB35338 |
2019-12-09 |
| 205 |
Eurasian water vole (alternate hap 2020)[IGV] |
Arvicola amphibius |
GCA_903992525.1_mArvAmp1.1_alternate_haplotype |
SAMEA994740 |
PRJEB39549 |
2020-08-04 |
| 206 |
Eurasian water vole (v2 2021)[IGV] |
Arvicola amphibius |
GCF_903992535.2_mArvAmp1.2 |
SAMEA994740 |
PRJEB39550 |
2021-05-15 |
| 207 |
European hare (LE1 primary hap 2023)[IGV] |
Lepus europaeus |
GCF_033115175.1_mLepTim1.pri |
SAMN33984520 |
PRJNA1009711 |
2023-10-31 |
| 208 |
European harvest mouse (primary hap 2024)[IGV] |
Micromys minutus |
GCA_963924665.1_mMicMin1.1 |
SAMEA112468042 |
PRJEB72093 |
2024-01-29 |
| 209 |
European mink (alternate hap 2023)[IGV] |
Mustela lutreola |
GCA_030435785.1_mMusLut2.alt |
SAMN35784236 |
PRJNA984927 |
2023-07-11 |
| 210 |
European mink (primary hap 2023 refseq)[IGV] |
Mustela lutreola |
GCF_030435805.1_mMusLut2.pri |
SAMN35784236 |
PRJNA984926 |
2023-07-13 |
| 211 |
European mole (hap1 2024)[IGV] |
Talpa europaea |
GCA_964194135.1_mTalEur1.hap1.1 |
SAMEA112468127 |
PRJEB76907 |
2024-06-28 |
| 212 |
European mole (hap2 2024)[IGV] |
Talpa europaea |
GCA_964194205.1_mTalEur1.hap2.1 |
SAMEA112468127 |
PRJEB76906 |
2024-06-27 |
| 213 |
European pine marten (primary hap 2023)[IGV] |
Martes martes |
GCA_963455335.1_mMarMar1.1 |
SAMEA14268932 |
PRJEB65998 |
2023-09-20 |
| 214 |
European shrew (alternate hap 2023)[IGV] |
Sorex araneus |
GCA_027595995.1_mSorAra2.alt |
SAMN32477717 |
PRJNA916524 |
2023-01-06 |
| 215 |
European shrew (GB8-d 2012)[IGV] |
Sorex araneus |
GCF_000181275.1_SorAra2.0 |
SAMN00210854 |
PRJNA13689 |
2012-08-27 |
| 216 |
European shrew (primary hap 2023)[IGV] |
Sorex araneus |
GCF_027595985.1_mSorAra2.pri |
SAMN32477717 |
PRJNA916523 |
2023-01-09 |
| 217 |
European snow vole (alternate hap 2023)[IGV] |
Chionomys nivalis |
GCA_950005115.1_mChiNiv1.1_alternate_haplotype |
SAMEA13217622 |
PRJEB61597 |
2023-04-29 |
| 218 |
European snow vole (primary hap 2023 refseq)[IGV] |
Chionomys nivalis |
GCF_950005125.1_mChiNiv1.1 |
SAMEA13217622 |
PRJEB61598 |
2023-05-01 |
| 219 |
European suslik (primary hap 2024)[IGV] |
Spermophilus citellus |
GCA_964194105.1_mSpeCit3.1 |
SAMEA10332752 |
PRJEB76892 |
2024-06-28 |
| 220 |
European woodmouse (2022 refseq)[IGV] |
Apodemus sylvaticus |
GCF_947179515.1_mApoSyl1.1 |
SAMEA7702024 |
PRJEB56948 |
2022-10-28 |
| 221 |
European woodmouse (alternate hap 2022)[IGV] |
Apodemus sylvaticus |
GCA_947179525.1_mApoSyl1.1_alternate_haplotype |
SAMEA7702024 |
PRJEB56947 |
2022-11-01 |
| 222 |
fallow deer (Ldn47 2023)[IGV] |
Dama dama |
GCF_033118175.1_ASM3311817v1 |
SAMN31886425 |
PRJNA905851 |
2023-11-02 |
| 223 |
false killer whale (hap1 2024)[IGV] |
Pseudorca crassidens |
GCA_039906515.1_mPseCra1.hap1 |
SAMN41253811 |
PRJNA1108771 |
2024-05-31 |
| 224 |
false killer whale (hap2 2024)[IGV] |
Pseudorca crassidens |
GCA_039906525.1_mPseCra1.hap2 |
SAMN41253811 |
PRJNA1108772 |
2024-05-31 |
| 225 |
false killer whale (mPseCra1hap1 2024)[IGV] |
Pseudorca crassidens |
GCF_039906515.1_mPseCra1.hap1 |
SAMN41253811 |
PRJNA1108771 |
2024-05-31 |
| 226 |
fat dormouse (US078 2019)[IGV] |
Glis glis |
GCA_004027185.1_GliGli_v1_BIUU |
SAMN07678015 |
PRJNA399435 |
2019-01-16 |
| 227 |
fat sand rat (mPsaObe1 2021)[IGV] |
Psammomys obesus |
GCF_907164565.1_mPsaObe1.curated_primary_1811 |
SAMEA8556771 |
PRJEB44074 |
2021-06-02 |
| 228 |
fat sand rat (Psa_ob012049795 2017)[IGV] |
Psammomys obesus |
GCA_002215935.1_ASM221593v1 |
SAMN06061930 |
PRJNA355058 |
2017-07-07 |
| 229 |
fishing cat (Anna 2022 U Missouri)[IGV] |
Prionailurus viverrinus |
GCF_022837055.1_UM_Priviv_1.0 |
SAMN26586088 |
PRJNA815338 |
2022-04-08 |
| 230 |
Florida manatee (CSIC 2023)[IGV] |
Trichechus manatus latirostris |
GCA_030013775.1_ASM3001377v1 |
SAMN00632092 |
PRJNA939417 |
2023-05-15 |
| 231 |
Florida manatee (Lorelei 2012 refseq)[IGV] |
Trichechus manatus latirostris |
GCF_000243295.1_TriManLat1.0 |
SAMN00632092 |
PRJNA68243 |
2012-01-23 |
| 232 |
fossa[IGV] |
Cryptoprocta ferox |
GCA_004023885.1_CryFer_v1_BIUU |
SAMN07678074 |
PRJNA399384 |
2019-01-15 |
| 233 |
Gambian giant pouched rat[IGV] |
Cricetomys gambianus |
GCA_004027575.1_CriGam_v1_BIUU |
SAMN07678025 |
PRJNA399436 |
2019-01-16 |
| 234 |
gayal (CVASU_BF_001 2021)[IGV] |
Bos frontalis |
GCA_017311355.1_CVASU_Gayal_001 |
SAMN16965583 |
PRJNA655910 |
2021-03-09 |
| 235 |
gayal (Nagaland 2019)[IGV] |
Bos frontalis |
GCA_007844835.1_NRC_Mithun_1 |
SAMN02689702 |
PRJNA241403 |
2019-08-05 |
| 236 |
Geoffroy's cat[IGV] |
Leopardus geoffroyi |
GCF_018350155.1_O.geoffroyi_Oge1_pat1.0 |
SAMN19729386 |
PRJNA684599 |
2021-05-13 |
| 237 |
giant anteater[IGV] |
Myrmecophaga tridactyla |
GCA_004026745.1_MyrTri_v1_BIUU |
SAMN07678098 |
PRJNA399407 |
2019-01-16 |
| 238 |
giant otter[IGV] |
Pteronura brasiliensis |
GCA_004024605.1_PteBra_v1_BIUU |
SAMN07678049 |
PRJNA399365 |
2019-01-15 |
| 239 |
giant panda (Jingjing v3 2020)[IGV] |
Ailuropoda melanoleuca |
GCF_002007445.2_ASM200744v3 |
SAMN04193337 |
PRJNA588422 |
2020-04-20 |
| 240 |
goat (v2 San Clemente 2016 USDA)[IGV] |
Capra hircus |
GCF_001704415.2_ARS1.2 |
SAMN03863711 |
PRJNA290100 |
2016-08-24 |
| 241 |
Gobi jerboa[IGV] |
Orientallactaga bullata |
GCA_004027895.1_AllBul_v1_BIUU |
SAMN07678035 |
PRJNA399447 |
2019-01-16 |
| 242 |
golden hamster (Baylor 2021)[IGV] |
Mesocricetus auratus |
GCF_017639785.1_BCM_Maur_2.0 |
SAMN18096087 |
PRJNA705675 |
2021-03-30 |
| 243 |
golden hamster (Broad 2013 refseq)[IGV] |
Mesocricetus auratus |
GCF_000349665.1_MesAur1.0 |
SAMN00769068 |
PRJNA77669 |
2013-03-29 |
| 244 |
golden spiny mouse (2020)[IGV] |
Acomys russatus |
GCF_903995435.1_mAcoRus1.1 |
SAMEA104026431 |
PRJEB39768 |
2020-08-21 |
| 245 |
gracile shrew mole[IGV] |
Uropsilus gracilis |
GCA_004024945.1_UroGra_v1_BIUU |
SAMN07678046 |
PRJNA399362 |
2019-01-15 |
| 246 |
gray fox (Vermont ataVT051 2023)[IGV] |
Urocyon cinereoargenteus |
GCA_032313775.1_UCinereo1.0 |
SAMN37004681 |
PRJNA1005958 |
2023-10-04 |
| 247 |
gray seal[IGV] |
Halichoerus grypus |
GCF_012393455.1_Tufts_HGry_1.1 |
SAMN13022322 |
PRJNA577240 |
2020-04-15 |
| 248 |
gray short-tailed opossum (mMonDom1 alternate hap 2023)[IGV] |
Monodelphis domestica |
GCA_027917375.1_mMonDom1.alt |
SAMN31801966 |
PRJNA915591 |
2023-01-17 |
| 249 |
gray short-tailed opossum (mMonDom1 primary hap 2023 refseq)[IGV] |
Monodelphis domestica |
GCF_027887165.1_mMonDom1.pri |
SAMN31801966 |
PRJNA915592 |
2023-01-18 |
| 250 |
gray short-tailed opossum (MonDom5 2007)[IGV] |
Monodelphis domestica |
GCF_000002295.2_MonDom5 |
SAMN02953611 |
PRJNA12561 |
2007-01-25 |
| 251 |
gray squirrel (2020)[IGV] |
Sciurus carolinensis |
GCF_902686445.1_mSciCar1.2 |
SAMEA994726 |
PRJEB35386 |
2020-07-31 |
| 252 |
gray squirrel (alternate hap 2019)[IGV] |
Sciurus carolinensis |
GCA_902685475.1_mSciCar1.1_alternate_haplotype |
SAMEA994726 |
PRJEB35385 |
2019-11-26 |
| 253 |
gray wolf (2021)[IGV] |
Canis lupus |
GCA_905319855.2_mCanLor1.2 |
SAMEA7532739 |
PRJEB43200 |
2021-03-26 |
| 254 |
gray wolf (alternate hap 2021)[IGV] |
Canis lupus |
GCA_905319845.1_mCanLor1.1_alternate_haplotype |
SAMEA7532739 |
PRJEB43199 |
2021-03-21 |
| 255 |
great fruit-eating bat (mArtLit1hap2 2024)[IGV] |
Artibeus lituratus |
GCA_038363175.2_mArtLit1.hap2 |
SAMN40002247 |
PRJNA1080657 |
2024-05-17 |
| 256 |
great fruit-eating bat (v2 hap1 2024)[IGV] |
Artibeus lituratus |
GCA_038363095.2_mArtLit.hap1 |
SAMN40002247 |
PRJNA1080658 |
2024-05-21 |
| 257 |
great roundleaf bat (v2 ML-2016 2016)[IGV] |
Hipposideros armiger |
GCF_001890085.2_ASM189008v1 |
SAMN03177460 |
PRJNA267039 |
2016-12-06 |
| 258 |
greater bulldog bat[IGV] |
Noctilio leporinus |
GCA_004026585.1_NocLep_v1_BIUU |
SAMN07678134 |
PRJNA399473 |
2019-01-16 |
| 259 |
Greater cane rat[IGV] |
Thryonomys swinderianus |
GCA_004025085.1_ThrSwi_v1_BIUU |
SAMN07678129 |
PRJNA399470 |
2019-01-15 |
| 260 |
greater horseshoe bat (MPI-CBG alternate hap 2019)[IGV] |
Rhinolophus ferrumequinum |
GCA_004115295.1_mRhiFer1_v1.h |
SAMN09948510 |
PRJNA489105 |
2019-01-28 |
| 261 |
greater horseshoe bat (v2 MPI-CBG 2019)[IGV] |
Rhinolophus ferrumequinum |
GCF_004115265.2_mRhiFer1_v1.p |
SAMN09948510 |
PRJNA489106 |
2019-05-16 |
| 262 |
greater mouse-eared bat (2020 Bat1K)[IGV] |
Myotis myotis |
GCF_014108235.1_mMyoMyo1.p |
SAMN14734277 |
PRJNA628559 |
2020-08-07 |
| 263 |
greater sac-winged bat (primary hap 2024 refseq)[IGV] |
Saccopteryx bilineata |
GCF_036850765.1_mSacBil1_pri_phased_curated |
SAMN37288508 |
PRJNA1013202 |
2024-02-26 |
| 264 |
greater spear-nosed bat (2021 Texas Tech U)[IGV] |
Phyllostomus hastatus |
GCF_019186645.2_TTU_PhHast_1.1 |
SAMN19371543 |
PRJNA733208 |
2021-07-09 |
| 265 |
grey whale[IGV] |
Eschrichtius robustus |
GCA_004363415.1_EscRob_v1_BIUU |
SAMN07678123 |
PRJNA399463 |
2019-03-22 |
| 266 |
grey whale (mEscRob2 alternate hap 2023)[IGV] |
Eschrichtius robustus |
GCA_028021475.1_mEscRob2.alt |
SAMN32629250 |
PRJNA921703 |
2023-01-26 |
| 267 |
grey whale (mEscRob2 primary hap 2023)[IGV] |
Eschrichtius robustus |
GCA_028021215.1_mEscRob2.pri |
SAMN32629250 |
PRJNA921702 |
2023-01-31 |
| 268 |
grey whale (mEscRob2 primary hap 2023)[IGV] |
Eschrichtius robustus |
GCF_028021215.1_mEscRob2.pri |
SAMN32629250 |
PRJNA921702 |
2023-01-31 |
| 269 |
hairy big-eared bat (US037 2019 Broad)[IGV] |
Micronycteris hirsuta |
GCA_004026765.1_MicHir_v1_BIUU |
SAMN07678146 |
PRJNA399354 |
2019-01-16 |
| 270 |
harbor porpoise (primary hap 2024 genbank)[IGV] |
Phocoena phocoena |
GCA_963924675.1_mPhoPho1.1 |
SAMEA111380536 |
PRJEB72090 |
2024-01-29 |
| 271 |
harbor porpoise (primary hap 2024 refseq)[IGV] |
Phocoena phocoena |
GCF_963924675.1_mPhoPho1.1 |
SAMEA111380536 |
PRJEB72090 |
2024-01-29 |
| 272 |
harbor seal[IGV] |
Phoca vitulina |
GCF_004348235.1_GSC_HSeal_1.0 |
SAMN10150265 |
PRJNA494181 |
2019-02-11 |
| 273 |
Hawaiian monk seal (2021 Johns Hopkins U)[IGV] |
Neomonachus schauinslandi |
GCF_002201575.2_ASM220157v2 |
SAMN06841387 |
PRJNA384558 |
2021-10-20 |
| 274 |
hazel dormouse[IGV] |
Muscardinus avellanarius |
GCA_004027005.1_MusAve_v1_BIUU |
SAMN07678014 |
PRJNA399340 |
2019-01-16 |
| 275 |
hazel dormouse (alternate hap 2023)[IGV] |
Muscardinus avellanarius |
GCA_963383665.1_mMusAve1.1_alternate_haplotype |
SAMEA110180654 |
PRJEB65339 |
2023-08-27 |
| 276 |
hazel dormouse (primary hap 2023)[IGV] |
Muscardinus avellanarius |
GCA_963383645.1_mMusAve1.1 |
SAMEA110180654 |
PRJEB65338 |
2023-08-26 |
| 277 |
hippopotamus (BS01 2019 Broad)[IGV] |
Hippopotamus amphibius |
GCA_004027065.1_HipAmp_v1_BIUU |
SAMN07678089 |
PRJNA399399 |
2019-01-16 |
| 278 |
hippopotamus (HIP001 2018)[IGV] |
Hippopotamus amphibius |
GCA_002995585.1_ASM299558v1 |
SAMN07206988 |
PRJNA389773 |
2018-03-13 |
| 279 |
hippopotamus (mHipAmp2 hap1 2023)[IGV] |
Hippopotamus amphibius kiboko |
GCA_030028035.1_mHipAmp2.hap1 |
SAMN33342074 |
PRJNA936167 |
2023-05-17 |
| 280 |
hippopotamus (v2 hap2 2023 refseq)[IGV] |
Hippopotamus amphibius kiboko |
GCF_030028045.1_mHipAmp2.hap2 |
SAMN33342074 |
PRJNA936168 |
2023-05-18 |
| 281 |
hirola (BS46 2019 Broad)[IGV] |
Beatragus hunteri |
GCA_004027495.1_BeaHun_v1_BIUU |
SAMN07678065 |
PRJNA399375 |
2019-01-16 |
| 282 |
Hispaniolan solenodon[IGV] |
Solenodon paradoxus |
GCA_004363575.1_SolPar_v1_BIUU |
SAMN07678062 |
PRJNA399371 |
2019-03-22 |
| 283 |
hispid cotton rat[IGV] |
Sigmodon hispidus |
GCA_004025045.1_SigHis_v1_BIUU |
SAMN07678138 |
PRJNA399433 |
2019-01-15 |
| 284 |
Hoffmann's two-fingered sloth[IGV] |
Choloepus hoffmanni |
GCA_000164785.2_C_hoffmanni-2.0.1 |
SAMN02146716 |
PRJNA30809 |
2014-09-30 |
| 285 |
hog-nosed bat[IGV] |
Craseonycteris thonglongyai |
GCA_004027555.1_CraTho_v1_BIUU |
SAMN07678039 |
PRJNA399445 |
2019-01-16 |
| 286 |
Honduran yellow-shouldered bat (v2.1 Veracruz 20B 2020)[IGV] |
Sturnira hondurensis |
GCF_014824575.3_WHU_Shon_v2.1 |
SAMN12282880 |
PRJNA554734 |
2020-09-30 |
| 287 |
horse (maternal 2024)[IGV] |
Equus caballus |
GCA_036418255.1_mEquCab1.mat |
SAMN39296386 |
PRJNA1064425 |
2024-02-07 |
| 288 |
horse (paternal 2024)[IGV] |
Equus caballus |
GCA_036426135.1_mEquCab1.pat |
SAMN39296386 |
PRJNA1064424 |
2024-02-07 |
| 289 |
horse (Twilight 2018)[IGV] |
Equus caballus |
GCF_002863925.1_EquCab3.0 |
SAMN02953672 |
PRJNA421018 |
2018-01-05 |
| 290 |
house mouse (129S1_SvImJv1 2016)[IGV] |
Mus musculus |
GCA_001624185.1_129S1_SvImJ_v1 |
SAMN04489811 |
PRJNA310854 |
2016-04-26 |
| 291 |
house mouse (129S1_SvImJ_v3 2022)[IGV] |
Mus musculus |
GCA_921998555.2_129S1_SvImJ_v3 |
SAMEA9544178 |
PRJEB47108 |
2022-07-01 |
| 292 |
house mouse (AKR_J v3 2022)[IGV] |
Mus musculus |
GCA_922000895.2_AKR_J_v3 |
SAMEA9544180 |
PRJEB47108 |
2022-07-01 |
| 293 |
house mouse (alternate hap 2023)[IGV] |
Mus musculus |
GCA_949316305.1_mMusMuc1.1_alternate_haplotype |
SAMEA112251260 |
PRJEB60145 |
2023-04-08 |
| 294 |
house mouse (A_J v3 2022)[IGV] |
Mus musculus |
GCA_921998355.2_A_J_v3 |
SAMEA9544179 |
PRJEB47108 |
2022-06-30 |
| 295 |
house mouse (BALB_cJ v3 2022)[IGV] |
Mus musculus |
GCA_921997145.2_BALB_cJ_v3 |
SAMEA9544181 |
PRJEB47108 |
2022-07-01 |
| 296 |
house mouse (C3H_HeJ v3 2022)[IGV] |
Mus musculus |
GCA_921997125.2_C3H_HeJ_v3 |
SAMEA9544182 |
PRJEB47108 |
2022-07-01 |
| 297 |
house mouse (C57BL_6J T2T 2024)[IGV] |
Mus musculus |
GCA_964188535.1_C57BL_6J_T2T_v1 |
SAMEA115765483 |
PRJEB47108 |
2024-06-23 |
| 298 |
house mouse (CBA_J v3 2022)[IGV] |
Mus musculus |
GCA_921998905.2_CBA_J_v3 |
SAMEA9544184 |
PRJEB47108 |
2022-06-30 |
| 299 |
house mouse (DBA_2J v3 2022)[IGV] |
Mus musculus |
GCA_921998315.2_DBA_2J_v3 |
SAMEA9544177 |
PRJEB47108 |
2022-07-01 |
| 300 |
house mouse (FVB_NJ v3 2022)[IGV] |
Mus musculus |
GCA_921998635.2_FVB_NJ_v3 |
SAMEA9544185 |
PRJEB47108 |
2022-07-01 |
| 301 |
house mouse (LP_J v3 2022)[IGV] |
Mus musculus |
GCA_947599735.1_LP_J_v3 |
SAMEA9544186 |
PRJEB47108 |
2022-12-18 |
| 302 |
house mouse (NOD_ShiLtJ v3 2022)[IGV] |
Mus musculus |
GCA_921998325.2_NOD_ShiLtJ_v3 |
SAMEA9544187 |
PRJEB47108 |
2022-07-01 |
| 303 |
house mouse (NZO_HlLtJ v3 2022)[IGV] |
Mus musculus |
GCA_947593165.1_NZO_HlLtJ_v3 |
SAMEA9544188 |
PRJEB47108 |
2022-12-18 |
| 304 |
house mouse (primary hap 2023)[IGV] |
Mus musculus |
GCA_949316315.1_mMusMuc1.1 |
SAMEA112251260 |
PRJEB60144 |
2023-04-08 |
| 305 |
house mouse C57BL/6J 2020 GRC[IGV] |
Mus musculus |
GCF_000001635.27_GRCm39 |
n/a |
PRJNA20689 |
2020-06-24 |
| 306 |
house mouse C57BL_6NJ (2016)[IGV] |
Mus musculus |
GCA_001632555.1_C57BL_6NJ_v1 |
SAMN04489821 |
PRJNA310854 |
2016-05-09 |
| 307 |
house mouse C57BL_6NJ (2022)[IGV] |
Mus musculus |
GCA_921999865.2_C57BL_6NJ_v3 |
SAMEA9544183 |
PRJEB47108 |
2022-07-01 |
| 308 |
humpback whale (KW2013002 2024)[IGV] |
Megaptera novaeangliae |
GCA_041834305.1_ASM4183430v1 |
SAMN41059645 |
PRJNA1103780 |
2024-09-09 |
| 309 |
hybrid cattle (Angus x Brahman F1 Angus haplotype 2018)[IGV] |
Bos indicus x Bos taurus |
GCA_003369685.2_UOA_Angus_1 |
SAMN08473802 |
PRJNA432857 |
2018-11-30 |
| 310 |
hybrid cattle (Angus x Brahman F1 Brahman haplotype 2018)[IGV] |
Bos indicus x Bos taurus |
GCF_003369695.1_UOA_Brahman_1 |
SAMN08473802 |
PRJNA432857 |
2018-11-30 |
| 311 |
Iberian mole (v2.1 TD23 2020)[IGV] |
Talpa occidentalis |
GCF_014898055.3_MPIMG_talOcc4v2.1 |
SAMN10160270 |
PRJNA494291 |
2020-10-19 |
| 312 |
Indian false vampire[IGV] |
Megaderma lyra |
GCA_004026885.1_MegLyr_v1_BIUU |
SAMN07678029 |
PRJNA399353 |
2019-01-16 |
| 313 |
Indian flying fox[IGV] |
Pteropus giganteus |
GCF_902729225.1_Ma_sr-lr_union100 |
SAMEA5634742 |
PRJEB32728 |
2020-04-15 |
| 314 |
Indochinese shrew (US011 2019 Broad)[IGV] |
Crocidura indochinensis |
GCA_004027635.1_CroInd_v1_BIUU |
SAMN07678044 |
PRJNA399360 |
2019-01-16 |
| 315 |
Indus River dolphin[IGV] |
Platanista minor |
GCA_004363435.1_PlaMin_v1_BIUU |
SAMN07678149 |
PRJNA399467 |
2019-03-22 |
| 316 |
intermediate roundleaf bat (primary hap 2023)[IGV] |
Hipposideros larvatus |
GCA_031876335.1_mHipLar1.pri |
SAMN36277597 |
PRJNA1006758 |
2023-09-25 |
| 317 |
jaguar (BS21 2019)[IGV] |
Panthera onca |
GCA_004023805.1_PanOnc_v1_BIUU |
SAMN07678103 |
PRJNA399411 |
2019-01-15 |
| 318 |
jaguar (Sample0147 2023)[IGV] |
Panthera onca |
GCF_028533385.1_Panthera_onca_HiC |
SAMN14122073 |
PRJNA512907 |
2023-02-09 |
| 319 |
jaguarundi[IGV] |
Puma yagouaroundi |
GCF_014898765.1_PumYag |
SAMN14930875 |
PRJNA633021 |
2020-10-20 |
| 320 |
Jamaican fruit-eating bat (1a 2020 Wuhan U)[IGV] |
Artibeus jamaicensis |
GCF_014825515.1_WHU_Ajam_v2 |
SAMN12273914 |
PRJNA554589 |
2020-09-30 |
| 321 |
Jamaican fruit-eating bat (2021)[IGV] |
Artibeus jamaicensis |
GCF_021234435.1_CSHL_Jam_final |
SAMN21509358 |
PRJNA751559 |
2021-12-20 |
| 322 |
Japanese wild mouse (2022)[IGV] |
Mus musculus molossinus |
GCA_921999095.2_JF1_MsJ_v3 |
SAMEA9544190 |
PRJEB47108 |
2022-07-01 |
| 323 |
Java mouse-deer (US108 2019 Broad)[IGV] |
Tragulus javanicus |
GCA_004024965.1_TraJav_v1_BIUU |
SAMN07678116 |
PRJNA399456 |
2019-01-15 |
| 324 |
killer whale (2022)[IGV] |
Orcinus orca |
GCF_937001465.1_mOrcOrc1.1 |
SAMEA8800229 |
PRJEB52131 |
2022-05-03 |
| 325 |
killer whale (alternate hap 2022)[IGV] |
Orcinus orca |
GCA_937001455.1_mOrcOrc1.1_alternate_haplotype |
SAMEA8800229 |
PRJEB52132 |
2022-05-01 |
| 326 |
killer whale (Morgan 2013)[IGV] |
Orcinus orca |
GCF_000331955.2_Oorc_1.1 |
SAMN01180276 |
PRJNA167475 |
2013-01-31 |
| 327 |
koala (Bilbo 61053 2022)[IGV] |
Phascolarctos cinereus |
GCA_003287225.2_phaCin_HiC |
SAMN06198159 |
PRJNA359763 |
2022-12-12 |
| 328 |
Kuhl's pipistrelle (2020)[IGV] |
Pipistrellus kuhlii |
GCF_014108245.1_mPipKuh1.p |
SAMN14734388 |
PRJNA628567 |
2020-08-07 |
| 329 |
large flying fox[IGV] |
Pteropus vampyrus |
GCF_000151845.1_Pvam_2.0 |
SAMN02894360 |
PRJNA20325 |
2014-12-05 |
| 330 |
large Japanese field mouse (IB14-021 2017)[IGV] |
Apodemus speciosus |
GCA_002335545.1_Aspe_assembly01 |
SAMD00084465 |
PRJDB5914 |
2017-09-12 |
| 331 |
large tree shrew (BS70 2022)[IGV] |
Tupaia tana |
GCA_026018925.1_mTupTan1 |
SAMN07678117 |
PRJNA782001 |
2022-11-07 |
| 332 |
leopard (Hobbes primary hap 2022)[IGV] |
Panthera pardus |
GCF_024362965.1_ASM2436296v1 |
SAMN23235441 |
PRJNA847351 |
2022-07-21 |
| 333 |
leopard (Maewha 2016 refseq)[IGV] |
Panthera pardus |
GCF_001857705.1_PanPar1.0 |
SAMN04347630 |
PRJNA306701 |
2016-11-16 |
| 334 |
leopard cat[IGV] |
Prionailurus bengalensis |
GCF_016509475.1_Fcat_Pben_1.1_paternal_pri |
SAMN16486448 |
PRJNA682572 |
2021-01-06 |
| 335 |
lesser Egyptian jerboa (2021)[IGV] |
Jaculus jaculus |
GCF_020740685.1_mJacJac1.mat.Y.cur |
SAMN20391724 |
PRJNA773797 |
2021-11-04 |
| 336 |
lesser Egyptian jerboa (alternate hap 2021)[IGV] |
Jaculus jaculus |
GCA_020740715.1_mJacJac1.pat.decon |
SAMN20391724 |
PRJNA773798 |
2021-11-03 |
| 337 |
lesser Egyptian jerboa (JJ0015 2012 refseq)[IGV] |
Jaculus jaculus |
GCF_000280705.1_JacJac1.0 |
SAMN00728442 |
PRJNA72445 |
2012-07-30 |
| 338 |
lesser horseshoe bat (hap1 2024)[IGV] |
Rhinolophus hipposideros |
GCA_964194185.1_mRhiHip2.hap1.1 |
SAMEA113980802 |
PRJEB76910 |
2024-06-28 |
| 339 |
lesser horseshoe bat (hap2 2024)[IGV] |
Rhinolophus hipposideros |
GCA_964194215.1_mRhiHip2.hap2.1 |
SAMEA113980802 |
PRJEB76909 |
2024-06-27 |
| 340 |
lesser noctule (mNycLei1.hap1.1 2024)[IGV] |
Nyctalus leisleri |
GCA_964264875.1_mNycLei1.hap1.1 |
SAMEA114250308 |
PRJEB80299 |
2024-09-21 |
| 341 |
lesser noctule (mNycLei1.hap2.1 2024)[IGV] |
Nyctalus leisleri |
GCA_964264895.1_mNycLei1.hap2.1 |
SAMEA114250308 |
PRJEB80300 |
2024-09-21 |
| 342 |
lesser panda (RP43 2017)[IGV] |
Ailurus styani |
GCA_002007465.1_ASM200746v1 |
SAMN04169031 |
PRJNA298932 |
2017-02-28 |
| 343 |
lesser sac-winged bat (primary hap 2024 refseq)[IGV] |
Saccopteryx leptura |
GCF_036850995.1_mSacLep1_pri_phased_curated |
SAMN37390139 |
PRJNA1017170 |
2024-02-26 |
| 344 |
lion[IGV] |
Panthera leo |
GCF_018350215.1_P.leo_Ple1_pat1.1 |
SAMN17054329 |
PRJNA684340 |
2021-05-13 |
| 345 |
little brown bat[IGV] |
Myotis lucifugus |
GCF_000147115.1_Myoluc2.0 |
SAMN02953645 |
PRJNA16951 |
2010-09-14 |
| 346 |
little pocket mouse (longimembris alternate hap 2022)[IGV] |
Perognathus longimembris |
GCA_024363435.1_mPerLon1.0.a |
SAMN29044251 |
PRJNA855967 |
2022-07-21 |
| 347 |
little pocket mouse (longimembris primary hap 2022)[IGV] |
Perognathus longimembris |
GCA_024363575.1_mPerLon1.0.p |
SAMN29044251 |
PRJNA855968 |
2022-07-21 |
| 348 |
little tube-nosed bat[IGV] |
Murina aurata feae |
GCA_004026665.1_MurFea_v1_BIUU |
SAMN07678148 |
PRJNA399367 |
2019-01-16 |
| 349 |
long-finned pilot whale (primary hap 2023)[IGV] |
Globicephala melas |
GCF_963455315.1_mGloMel1.1 |
SAMEA111380538 |
PRJEB65996 |
2023-09-21 |
| 350 |
long-finned pilot whale (primary hap 2024)[IGV] |
Globicephala melas |
GCA_963455315.2_mGloMel1.2 |
SAMEA111380538 |
PRJEB65996 |
2024-09-07 |
| 351 |
long-finned pilot whale (X-22926-18 2019)[IGV] |
Globicephala melas |
GCF_006547405.1_ASM654740v1 |
SAMN11083132 |
PRJNA525909 |
2019-07-01 |
| 352 |
long-tailed chinchilla[IGV] |
Chinchilla lanigera |
GCF_000276665.1_ChiLan1.0 |
SAMN00632093 |
PRJNA68239 |
2012-08-28 |
| 353 |
long-tongued fruit bat (US102 2019 Broad)[IGV] |
Macroglossus sobrinus |
GCA_004027375.1_MacSob_v1_BIUU |
SAMN07678028 |
PRJNA399443 |
2019-01-16 |
| 354 |
Lowland paca[IGV] |
Cuniculus paca |
GCA_004365215.1_CunPac_v1_BIUU |
SAMN07678075 |
PRJNA399385 |
2019-03-22 |
| 355 |
Malayan pangolin (MP_PG03-UM 2016 refseq)[IGV] |
Manis javanica |
GCF_001685135.1_ManJav1.0 |
SAMN02935387 |
PRJNA256023 |
2016-07-14 |
| 356 |
Malayan pangolin YNU ManJav 2.0[IGV] |
Manis javanica |
GCF_014570535.1_YNU_ManJav_2.0 |
SAMN11464811 |
PRJNA529512 |
2020-09-15 |
| 357 |
Masai giraffe (MA1 2016 Penn St)[IGV] |
Giraffa tippelskirchi |
GCA_001651235.1_ASM165123v1 |
SAMN04526126 |
PRJNA313910 |
2016-05-20 |
| 358 |
meadow jumping mouse[IGV] |
Zapus hudsonius |
GCA_004024765.1_ZapHud_v1_BIUU |
SAMN07678139 |
PRJNA399434 |
2019-01-15 |
| 359 |
meadow vole (hap1 2024)[IGV] |
Microtus pennsylvanicus |
GCA_037038515.1_mMicPen1.hap1 |
SAMN39894136 |
PRJNA1074849 |
2024-03-06 |
| 360 |
meadow vole (hap2 2024)[IGV] |
Microtus pennsylvanicus |
GCA_037039175.1_mMicPen1.hap2 |
SAMN39894136 |
PRJNA1074850 |
2024-03-06 |
| 361 |
meerkat (VVHF042 2019 DNA Zoo refseq)[IGV] |
Suricata suricatta |
GCF_006229205.1_meerkat_22Aug2017_6uvM2_HiC |
SAMN11840572 |
PRJNA540846 |
2019-07-03 |
| 362 |
Merriam's kangaroo rat (MVZ:Mamm:240054 alternate hap 2022)[IGV] |
Dipodomys merriami |
GCA_024711525.1_mDipMer1.0.a |
SAMN29046532 |
PRJNA851459 |
2022-08-18 |
| 363 |
Merriam's kangaroo rat (MVZ:Mamm:240054 primary hap 2022)[IGV] |
Dipodomys merriami |
GCA_024711535.1_mDipMer1.0.p |
SAMN29046532 |
PRJNA851460 |
2022-08-18 |
| 364 |
Merriam's long-tongued bat (hap1 2024)[IGV] |
Glossophaga mutica |
GCA_039655065.1_mGloMut1.hap1 |
SAMN40946060 |
PRJNA1099662 |
2024-05-17 |
| 365 |
Merriam's long-tongued bat (hap2 2024)[IGV] |
Glossophaga mutica |
GCA_039656995.1_mGloMut1.hap2 |
SAMN40946060 |
PRJNA1099663 |
2024-05-17 |
| 366 |
minke whale (2013 refseq)[IGV] |
Balaenoptera acutorostrata scammoni |
GCF_000493695.1_BalAcu1.0 |
SAMN02192642 |
PRJNA72723 |
2013-10-31 |
| 367 |
minke whale (alternate hap 2023)[IGV] |
Balaenoptera acutorostrata |
GCA_950005055.1_mBalAcu1.1_alternate_haplotype |
SAMEA111380540 |
PRJEB61580 |
2023-04-29 |
| 368 |
minke whale (primary hap 2023 refseq)[IGV] |
Balaenoptera acutorostrata |
GCF_949987535.1_mBalAcu1.1 |
SAMEA111380540 |
PRJEB61579 |
2023-05-01 |
| 369 |
Mongolian gerbil (243 2017 Lucigen Corp.)[IGV] |
Meriones unguiculatus |
GCF_002204375.1_MunDraft-v1.0 |
SAMN06897401 |
PRJNA385619 |
2017-06-21 |
| 370 |
Mongolian gerbil (EAM2014 2019 BGI)[IGV] |
Meriones unguiculatus |
GCA_008131255.1_ASM813125v1 |
SAMN11651137 |
PRJNA543000 |
2019-08-30 |
| 371 |
Mongolian gerbil (TT.TT164.6M 2023)[IGV] |
Meriones unguiculatus |
GCF_030254825.1_Bangor_MerUng_6.1 |
SAMN26787832 |
PRJNA397533 |
2023-06-12 |
| 372 |
monito del monte (mDroGli1 alternate hap 2021)[IGV] |
Dromiciops gliroides |
GCA_019395325.1_mDroGli1.alt |
SAMN18857598 |
PRJNA728142 |
2021-07-29 |
| 373 |
monito del monte (mDroGli1 primary hap 2021 refseq)[IGV] |
Dromiciops gliroides |
GCF_019393635.1_mDroGli1.pri |
SAMN18857598 |
PRJNA728141 |
2021-08-03 |
| 374 |
Montane guinea pig[IGV] |
Cavia tschudii |
GCA_004027695.1_CavTsc_v1_BIUU |
SAMN07678017 |
PRJNA399343 |
2019-01-16 |
| 375 |
mountain beaver[IGV] |
Aplodontia rufa |
GCA_004027875.1_AplRuf_v1_BIUU |
SAMN07678037 |
PRJNA399342 |
2019-01-16 |
| 376 |
muskrat[IGV] |
Ondatra zibethicus |
GCA_004026605.1_OndZib_v1_BIUU |
SAMN07678059 |
PRJNA399451 |
2019-01-16 |
| 377 |
naked mole-rat (MEF-2018 2020)[IGV] |
Heterocephalus glaber |
GCA_014060925.1_Heter_glaber.v1.7_hic_pac |
SAMN10409247 |
PRJNA505051 |
2020-08-04 |
| 378 |
naked mole-rat (NMR 29 2012 refseq)[IGV] |
Heterocephalus glaber |
GCF_000247695.1_HetGla_female_1.0 |
SAMN00714537 |
PRJNA72441 |
2012-02-17 |
| 379 |
narwhal (Baffin Bay 2019)[IGV] |
Monodon monoceros |
GCF_005190385.1_NGI_Narwhal_1 |
SAMN10872456 |
PRJNA520934 |
2019-05-06 |
| 380 |
narwhal (Baffin Bay Population NGI 2022)[IGV] |
Monodon monoceros |
GCA_005190385.3_NGI_Narwhal_2 |
SAMN10872456 |
PRJNA520934 |
2022-11-09 |
| 381 |
Natal long-fingered bat[IGV] |
Miniopterus natalensis |
GCF_001595765.1_Mnat.v1 |
SAMN03652541 |
PRJNA283550 |
2016-03-22 |
| 382 |
Natterer's bat (mMyoNat1.hap1.1 2024)[IGV] |
Myotis nattereri |
GCA_964212035.1_mMyoNat1.hap1.1 |
SAMEA114614248 |
PRJEB78592 |
2024-08-02 |
| 383 |
Natterer's bat (mMyoNat1.hap2.1 2024)[IGV] |
Myotis nattereri |
GCA_964212025.1_mMyoNat1.hap2.1 |
SAMEA114614248 |
PRJEB78591 |
2024-08-02 |
| 384 |
neotropical fruit bat[IGV] |
Sturnira hondurensis |
GCF_014824575.2_WHU_Shon_v2.1 |
SAMN12282880 |
PRJNA554734 |
2020-09-30 |
| 385 |
Nile rat (mArvNil1 2024)[IGV] |
Arvicanthis niloticus |
GCA_011762505.2_mArvNil1.pat.X |
SAMN12611849 |
PRJNA608735 |
2024-10-22 |
| 386 |
Nilgiri tahr[IGV] |
Hemitragus hylocrius |
GCA_004026825.1_HemHyl_v1_BIUU |
SAMN07678087 |
PRJNA399397 |
2019-01-16 |
| 387 |
nine-banded armadillo (mDasNov1 hap1 2023)[IGV] |
Dasypus novemcinctus |
GCA_030445055.1_mDasNov1.hap1 |
SAMN32738980 |
PRJNA923799 |
2023-07-13 |
| 388 |
nine-banded armadillo (mDasNov1 hap1 2023)[IGV] |
Dasypus novemcinctus |
GCA_030445055.2_mDasNov1.1.hap1 |
SAMN32738980 |
PRJNA923799 |
2023-07-13 |
| 389 |
nine-banded armadillo (mDasNov1 hap2 2023)[IGV] |
Dasypus novemcinctus |
GCF_030445035.1_mDasNov1.hap2 |
SAMN32738980 |
PRJNA923800 |
2023-07-13 |
| 390 |
nine-banded armadillo (v3.2 3-136 2012 Baylor)[IGV] |
Dasypus novemcinctus |
GCF_000208655.3_Dasnov3.2 |
SAMN02953623 |
PRJNA12594 |
2012-01-06 |
| 391 |
North American deer mouse (MVZ:Mamm:240117 alternate hap 2022)[IGV] |
Peromyscus maniculatus sonoriensis |
GCA_026167925.1_mPerMan1.0.a |
SAMN29044276 |
PRJNA851173 |
2022-11-14 |
| 392 |
North American deer mouse (MVZ:Mamm:240117 primary hap 2022)[IGV] |
Peromyscus maniculatus sonoriensis |
GCA_026229955.1_mPerMan1.0.p |
SAMN29044276 |
PRJNA851174 |
2022-11-14 |
| 393 |
North American porcupine (mEreDor1 alternate hap 2023)[IGV] |
Erethizon dorsatum |
GCA_028500835.1_mEreDor1.alt |
SAMN32359106 |
PRJNA915122 |
2023-02-03 |
| 394 |
North American porcupine (mEreDor1 primary hap 2023)[IGV] |
Erethizon dorsatum |
GCA_028451465.1_mEreDor1.pri |
SAMN32359106 |
PRJNA915121 |
2023-02-06 |
| 395 |
North Atlantic right whale (hap1 2023)[IGV] |
Eubalaena glacialis |
GCA_028571275.1_mEubGla1.hap1 |
SAMN32746534 |
PRJNA924127 |
2023-02-09 |
| 396 |
North Atlantic right whale (hap2 + XY 2023 refseq)[IGV] |
Eubalaena glacialis |
GCF_028564815.1_mEubGla1.1.hap2._XY |
SAMN32746534 |
PRJNA924128 |
2023-02-09 |
| 397 |
North Pacific right whale[IGV] |
Eubalaena japonica |
GCA_004363455.1_EubJap_v1_BIUU |
SAMN07678124 |
PRJNA399464 |
2019-03-22 |
| 398 |
northern American river otter[IGV] |
Lontra canadensis |
GCF_010015895.1_GSC_riverotter_1.0 |
SAMN13049247 |
PRJNA578111 |
2020-01-27 |
| 399 |
northern bat (alternate hap 2023)[IGV] |
Eptesicus nilssonii |
GCA_951640545.1_mEptNil1.1_alternate_haplotype |
SAMEA14098186 |
PRJEB62201 |
2023-05-18 |
| 400 |
northern bat (primary hap 2023)[IGV] |
Eptesicus nilssonii |
GCA_951640355.1_mEptNil1.1 |
SAMEA14098186 |
PRJEB62200 |
2023-05-18 |
| 401 |
northern black mastiff bat (mMolNig1 2022)[IGV] |
Molossus nigricans |
GCA_026936385.1_BBF_mMolNig1_v1 |
SAMN31835895 |
PRJNA904257 |
2022-12-16 |
| 402 |
northern black mastiff bat (mMolNig1hap1 2024)[IGV] |
Molossus nigricans |
GCA_039880945.1_mMolNig1.hap1 |
SAMN40002246 |
PRJNA1093103 |
2024-05-29 |
| 403 |
northern black mastiff bat (mMolNig1hap2 2024)[IGV] |
Molossus nigricans |
GCA_039880925.1_mMolNig1.hap2 |
SAMN40002246 |
PRJNA1093104 |
2024-05-29 |
| 404 |
northern bottlenose whale (alternate hap 2023)[IGV] |
Hyperoodon ampullatus |
GCA_949752845.1_mHypAmp2.1_alternate_haplotype |
SAMEA10839125 |
PRJEB60894 |
2023-04-09 |
| 405 |
northern bottlenose whale (primary hap 2023)[IGV] |
Hyperoodon ampullatus |
GCA_949752795.1_mHypAmp2.1 |
SAMEA10839125 |
PRJEB60895 |
2023-04-08 |
| 406 |
northern elephant seal (BS05 2019 Broad)[IGV] |
Mirounga angustirostris |
GCA_004023865.1_MirAng_v1_BIUU |
SAMN07678016 |
PRJNA399341 |
2019-01-15 |
| 407 |
northern elephant seal (CCGP_5_RB_7025 hap1 2023 genbank)[IGV] |
Mirounga angustirostris |
GCA_029215605.1_mMirAng1.0.hap1 |
SAMN33386026 |
PRJNA937321 |
2023-03-14 |
| 408 |
Northern elephant seal (CCGP_5_RB_7025 hap1 2023 refseq)[IGV] |
Mirounga angustirostris |
GCF_029215605.1_mMirAng1.0.hap1 |
SAMN33386026 |
PRJNA937321 |
2023-03-14 |
| 409 |
northern elephant seal (CCGP_5_RB_7025 hap2 2023)[IGV] |
Mirounga angustirostris |
GCA_029215635.1_mMirAng1.0.hap2 |
SAMN33386026 |
PRJNA937320 |
2023-03-14 |
| 410 |
northern elephant seal (v3 JK_09032017 2022)[IGV] |
Mirounga angustirostris |
GCF_021288785.2_ASM2128878v3 |
SAMN13072016 |
PRJNA512907 |
2022-12-21 |
| 411 |
northern fur seal[IGV] |
Callorhinus ursinus |
GCF_003265705.1_ASM326570v1 |
SAMN09379881 |
PRJNA475116 |
2018-06-26 |
| 412 |
northern gundi[IGV] |
Ctenodactylus gundi |
GCA_004027205.1_CteGun_v1_BIUU |
SAMN07678018 |
PRJNA399344 |
2019-01-16 |
| 413 |
northern mole vole[IGV] |
Ellobius talpinus |
GCA_001685095.1_ETalpinus_0.1 |
SAMN04317029 |
PRJNA305123 |
2016-07-14 |
| 414 |
northern white rhinoceros[IGV] |
Ceratotherium simum cottoni |
GCA_004027795.1_CerCot_v1_BIUU |
SAMN07678069 |
PRJNA399457 |
2019-01-16 |
| 415 |
Norway rat (BN/NHsdMcwi 2024 genbank)[IGV] |
Rattus norvegicus |
GCA_036323735.1_GRCr8 |
SAMN38730095 |
PRJNA1027884 |
2024-01-31 |
| 416 |
Norway rat (BN/NHsdMcwi 2024 refseq)[IGV] |
Rattus norvegicus |
GCF_036323735.1_GRCr8 |
SAMN38730095 |
PRJNA1027884 |
2024-01-31 |
| 417 |
Norway rat (F344/Stm 2024)[IGV] |
Rattus norvegicus |
GCA_041222355.1_F344_StmMcwi |
SAMN40217939 |
PRJNA1082763 |
2024-08-12 |
| 418 |
Norway rat BN7 haplotype[IGV] |
Rattus norvegicus |
GCA_015244455.1_mRatBN7.1_alternate_haplotype |
SAMN16261960 |
PRJNA663241 |
2020-11-04 |
| 419 |
Norway rat BN7.2[IGV] |
Rattus norvegicus |
GCF_015227675.2_mRatBN7.2 |
SAMN16261960 |
PRJNA662791 |
2020-11-10 |
| 420 |
Norway rat celera[IGV] |
Rattus norvegicus |
GCF_000002265.2_Rn_Celera |
SAMN03000701 |
PRJNA13999 |
2006-12-06 |
| 421 |
Norway rat Rnor6.0[IGV] |
Rattus norvegicus |
GCF_000001895.5_Rnor_6.0 |
SAMN02808228 |
PRJNA10629 |
2014-07-01 |
| 422 |
Norway rat SHR/Utx RGD_8142385 2022[IGV] |
Rattus norvegicus |
GCA_023515785.1_UTH_Rnor_SHR_Utx |
SAMN27519281 |
PRJNA825507 |
2022-05-25 |
| 423 |
Norway rat SHRSP/BppUtx 2022[IGV] |
Rattus norvegicus |
GCA_021556685.1_UTH_Rnor_SHRSP_BbbUtx_1.0 |
SAMN24538170 |
PRJNA793432 |
2022-01-24 |
| 424 |
Norway rat WKY/Bbb 2022[IGV] |
Rattus norvegicus |
GCA_023515805.1_UTH_Rnor_WKY_Bbb_1.0 |
SAMN27518707 |
PRJNA825508 |
2022-05-25 |
| 425 |
nutria[IGV] |
Myocastor coypus |
GCA_004027025.1_MyoCoy_v1_BIUU |
SAMN07678020 |
PRJNA399346 |
2019-01-16 |
| 426 |
okapi[IGV] |
Okapia johnstoni |
GCA_001660835.1_ASM166083v1 |
SAMN04526128 |
PRJNA313910 |
2016-06-08 |
| 427 |
Ord's kangaroo rat[IGV] |
Dipodomys ordii |
GCF_000151885.1_Dord_2.0 |
SAMN02900551 |
PRJNA20385 |
2014-12-12 |
| 428 |
pacarana[IGV] |
Dinomys branickii |
GCA_004027595.1_DinBra_v1_BIUU |
SAMN07678079 |
PRJNA399389 |
2019-01-16 |
| 429 |
Pacific pocket mouse (BS65 2019 Broad)[IGV] |
Perognathus longimembris pacificus |
GCA_004363475.1_PerLonPac_v1_BIUU |
SAMN07678105 |
PRJNA399459 |
2019-03-22 |
| 430 |
Pacific pocket mouse (PPM17 2022 San Diego Zoo)[IGV] |
Perognathus longimembris pacificus |
GCF_023159225.1_ASM2315922v1 |
SAMN26876106 |
PRJNA818714 |
2022-04-27 |
| 431 |
Pacific walrus[IGV] |
Odobenus rosmarus divergens |
GCF_000321225.1_Oros_1.0 |
SAMN01180787 |
PRJNA167474 |
2013-01-16 |
| 432 |
Pacific white-sided dolphin[IGV] |
Lagenorhynchus obliquidens |
GCF_003676395.1_ASM367639v1 |
SAMN09386610 |
PRJNA475306 |
2018-10-23 |
| 433 |
pale spear-nosed bat (alternate hap MPI-MPIP 2019)[IGV] |
Phyllostomus discolor |
GCA_004115245.1_mPhyDis1_v1.h |
SAMN09948786 |
PRJNA489142 |
2019-01-28 |
| 434 |
pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 alternate hap 2020)[IGV] |
Phyllostomus discolor |
GCA_004115245.2_mPhyDis1.alti.v3 |
SAMN09948786 |
PRJNA489142 |
2020-05-11 |
| 435 |
pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 primary hap 2020)[IGV] |
Phyllostomus discolor |
GCF_004126475.2_mPhyDis1.pri.v3 |
SAMN09948786 |
PRJNA489141 |
2020-05-12 |
| 436 |
Pallas's mastiff bat[IGV] |
Molossus molossus |
GCF_014108415.1_mMolMol1.p |
SAMN14734448 |
PRJNA628574 |
2020-08-07 |
| 437 |
pallid bat (TK200870 primary hap 2023)[IGV] |
Antrozous pallidus |
GCA_027563665.1_DD_ASM_mAP_20210503 |
SAMN30225125 |
PRJNA868156 |
2023-01-09 |
| 438 |
Parnell's mustached bat (2013)[IGV] |
Pteronotus parnellii |
GCA_000465405.1_ASM46540v1 |
SAMN02212709 |
PRJNA209408 |
2013-09-13 |
| 439 |
Parnell's mustached bat (Mesoamerican 2021)[IGV] |
Pteronotus mesoamericanus |
GCF_021234165.1_CSHL_Meso_final |
SAMN21509357 |
PRJNA751559 |
2021-12-20 |
| 440 |
particolored bat (primary hap 2024)[IGV] |
Vespertilio murinus |
GCA_963924515.1_mVesMur1.1 |
SAMEA112247422 |
PRJEB72086 |
2024-01-29 |
| 441 |
Patagonian cavy[IGV] |
Dolichotis patagonum |
GCA_004027295.1_DolPat_v1_BIUU |
SAMN07678081 |
PRJNA399391 |
2019-01-16 |
| 442 |
Pere David's deer[IGV] |
Elaphurus davidianus |
GCA_002443075.1_Milu1.0 |
SAMN03020601 |
PRJNA256236 |
2017-10-04 |
| 443 |
Philippine flying lemur (mCynVol1 alternate hap 2022)[IGV] |
Cynocephalus volans |
GCA_027409165.1_mCynVol1.alt |
SAMN32206947 |
PRJNA911845 |
2022-12-27 |
| 444 |
Philippine flying lemur (mCynVol1 primary hap 2022 genbank)[IGV] |
Cynocephalus volans |
GCA_027409185.1_mCynVol1.pri |
SAMN32206947 |
PRJNA911844 |
2022-12-28 |
| 445 |
Philippine flying lemur (mCynVol1 primary hap 2022 refseq)[IGV] |
Cynocephalus volans |
GCF_027409185.1_mCynVol1.pri |
SAMN32206947 |
PRJNA911844 |
2022-12-28 |
| 446 |
pig (Bamei 2023)[IGV] |
Sus scrofa |
GCA_030704935.1_ASM3070493v1 |
SAMN29182547 |
PRJNA850464 |
2023-08-10 |
| 447 |
pig (Duroc 2017)[IGV] |
Sus scrofa |
GCF_000003025.6_Sscrofa11.1 |
SAMN02953785 |
PRJNA13421 |
2017-02-07 |
| 448 |
pig (USMARCv1 2017)[IGV] |
Sus scrofa |
GCA_002844635.1_USMARCv1.0 |
SAMN07325927 |
PRJNA392765 |
2017-12-20 |
| 449 |
plains zebra (Etosha38 2022 UCLA)[IGV] |
Equus quagga |
GCF_021613505.1_UCLA_HA_Equagga_1.0 |
SAMN16526506 |
PRJNA785630 |
2022-01-31 |
| 450 |
platypus (alternate hap Pmale09 2020)[IGV] |
Ornithorhynchus anatinus |
GCA_004115175.2_mOrnAna1.alt.v3 |
SAMN08537700 |
PRJNA489115 |
2020-04-06 |
| 451 |
platypus (Pmale09 v4 2020)[IGV] |
Ornithorhynchus anatinus |
GCF_004115215.2_mOrnAna1.pri.v4 |
SAMN08537700 |
PRJNA489114 |
2020-11-06 |
| 452 |
polar bear (Baiyulong BGI 2014 refseq)[IGV] |
Ursus maritimus |
GCF_000687225.1_UrsMar_1.0 |
SAMN02729226 |
PRJNA210951 |
2014-05-09 |
| 453 |
polar bear (UCSC 2021)[IGV] |
Ursus maritimus |
GCF_017311325.1_ASM1731132v1 |
SAMN10734297 |
PRJNA669153 |
2021-03-09 |
| 454 |
prairie deer mouse (Baylor 2013)[IGV] |
Peromyscus maniculatus bairdii |
GCF_000500345.1_Pman_1.0 |
SAMN00848614 |
PRJNA53563 |
2013-12-03 |
| 455 |
prairie deer mouse (Harvard 2020)[IGV] |
Peromyscus maniculatus bairdii |
GCF_003704035.1_HU_Pman_2.1.3 |
SAMN10150431 |
PRJNA494228 |
2020-09-17 |
| 456 |
prairie vole[IGV] |
Microtus ochrogaster |
GCF_000317375.1_MicOch1.0 |
SAMN00727831 |
PRJNA72443 |
2012-12-07 |
| 457 |
proboscis bat (hap1 2024)[IGV] |
Rhynchonycteris naso |
GCA_037038545.1_mRhyNas2.hap1 |
SAMN39947078 |
PRJNA1076651 |
2024-03-06 |
| 458 |
proboscis bat (hap2 2024)[IGV] |
Rhynchonycteris naso |
GCA_037038555.1_mRhyNas2.hap2 |
SAMN39947078 |
PRJNA1076652 |
2024-03-06 |
| 459 |
pronghorn (PH2016 2021)[IGV] |
Antilocapra americana |
GCA_021018645.1_ASM2101864v1 |
SAMN08712244 |
PRJNA438286 |
2021-12-01 |
| 460 |
Przewalski's horse (Burgud 2014 refseq)[IGV] |
Equus przewalskii |
GCF_000696695.1_Burgud |
SAMN02808398 |
PRJNA200657 |
2014-06-05 |
| 461 |
puma (L17-30 alternate hap 2023)[IGV] |
Puma concolor |
GCA_028749965.1_mPumCon1.0.hap2 |
SAMN30567381 |
PRJNA887114 |
2023-02-06 |
| 462 |
puma (L17-30 primary hap 2023)[IGV] |
Puma concolor |
GCA_028749985.1_mPumCon1.0.hap1 |
SAMN30567381 |
PRJNA887115 |
2023-02-21 |
| 463 |
puma (SC36_Marlon 2018 refseq)[IGV] |
Puma concolor |
GCF_003327715.1_PumCon1.0 |
SAMN08662999 |
PRJNA437459 |
2018-07-19 |
| 464 |
punctate agouti[IGV] |
Dasyprocta punctata |
GCA_004363535.1_DasPun_v1_BIUU |
SAMN07678076 |
PRJNA399386 |
2019-03-22 |
| 465 |
pygmy sperm whale[IGV] |
Kogia breviceps |
GCA_004363705.1_KogBre_v1_BIUU |
SAMN07678126 |
PRJNA399466 |
2019-03-22 |
| 466 |
pygmy sperm whale (mKogBre1 2022 refseq)[IGV] |
Kogia breviceps |
GCF_026419965.1_mKogBre1_haplotype_1 |
SAMN31719513 |
PRJNA901930 |
2022-11-27 |
| 467 |
pygmy sperm whale (mKogBre1 haplotype 2 2022)[IGV] |
Kogia breviceps |
GCA_026419985.1_mKogBre1_haplotype_2 |
SAMN31719513 |
PRJNA901931 |
2022-11-27 |
| 468 |
Pyrenean desman (IBE-C5619 2021)[IGV] |
Galemys pyrenaicus |
GCA_019455555.1_Gpyr_1.0 |
SAMN18106611 |
PRJNA705855 |
2021-08-05 |
| 469 |
rabbit (New Zealand White DNA-2018 2021 refseq)[IGV] |
Oryctolagus cuniculus |
GCF_009806435.1_UM_NZW_1.0 |
SAMN12179861 |
PRJNA274594 |
2021-02-04 |
| 470 |
rabbit (primary hap 2024)[IGV] |
Oryctolagus cuniculus |
GCA_964237555.1_mOryCun1.1 |
SAMEA112468037 |
PRJEB79209 |
2024-08-31 |
| 471 |
rabbit (Thorbecke 2009 Broad refseq)[IGV] |
Oryctolagus cuniculus |
GCF_000003625.3_OryCun2.0 |
SAMN02953624 |
PRJNA12819 |
2009-10-20 |
| 472 |
raccoon dog (2021)[IGV] |
Nyctereutes procyonoides |
GCF_905146905.1_NYPRO_anot_genome |
SAMEA7690874 |
PRJEB41734 |
2021-02-14 |
| 473 |
Rambouillet sheep (Baylor 2017)[IGV] |
Ovis aries |
GCF_002742125.1_Oar_rambouillet_v1.0 |
SAMEA104496890 |
PRJNA414087 |
2017-11-02 |
| 474 |
Rambouillet sheep (U.Idaho 2021)[IGV] |
Ovis aries |
GCF_016772045.1_ARS-UI_Ramb_v2.0 |
SAMN17575729 |
PRJNA675594 |
2021-02-03 |
| 475 |
ratel[IGV] |
Mellivora capensis |
GCA_004024625.1_MelCap_v1_BIUU |
SAMN07678094 |
PRJNA399403 |
2019-01-15 |
| 476 |
red bat[IGV] |
Lasiurus borealis |
GCA_004026805.1_LasBor_v1_BIUU |
SAMN07678027 |
PRJNA399352 |
2019-01-16 |
| 477 |
red deer (2021)[IGV] |
Cervus elaphus |
GCF_910594005.1_mCerEla1.1 |
SAMEA7523520 |
PRJEB45838 |
2021-07-07 |
| 478 |
red deer (alternate hap 2021)[IGV] |
Cervus elaphus |
GCA_910593805.1_mCerEla1.1_alternate_haplotype |
SAMEA7523520 |
PRJEB45837 |
2021-07-07 |
| 479 |
red fox (hap1 2024)[IGV] |
Vulpes vulpes |
GCA_964106825.2_mVulVul1.hap1.2 |
SAMEA113398840 |
PRJEB75990 |
2024-06-27 |
| 480 |
red fox (hap2 2024)[IGV] |
Vulpes vulpes |
GCA_964106925.2_mVulVul1.hap2.2 |
SAMEA113398840 |
PRJEB75989 |
2024-06-27 |
| 481 |
red fox (tameXaggressive cross 2018)[IGV] |
Vulpes vulpes |
GCF_003160815.1_VulVul2.2 |
SAMN06553695 |
PRJNA378561 |
2018-05-25 |
| 482 |
reed vole (MF-2015 2020)[IGV] |
Alexandromys fortis |
GCF_014885135.2_M_Fortis_MF-2015_v1.1 |
SAMN07276871 |
PRJNA391843 |
2020-10-13 |
| 483 |
Reeves' muntjac (alternate hap 2024)[IGV] |
Muntiacus reevesi |
GCA_963930665.1_mMunRee1.1_alternate_haplotype |
SAMEA110690972 |
PRJEB72163 |
2024-01-31 |
| 484 |
Reeves' muntjac (primary hap 2024)[IGV] |
Muntiacus reevesi |
GCF_963930625.1_mMunRee1.1 |
SAMEA110690972 |
PRJEB72164 |
2024-01-31 |
| 485 |
reindeer (2023)[IGV] |
Rangifer tarandus |
GCA_963422255.1_RTA_final |
SAMEA114317201 |
PRJEB65312 |
2023-09-04 |
| 486 |
reindeer (US061 2019)[IGV] |
Rangifer tarandus |
GCA_004026565.1_RanTarSib_v1_BIUU |
SAMN07678109 |
PRJNA399416 |
2019-01-16 |
| 487 |
Rice's whale (hap1 2023)[IGV] |
Balaenoptera ricei |
GCA_028017805.1_mBalRic1.hap1 |
SAMN32629060 |
PRJNA921697 |
2023-01-26 |
| 488 |
Rice's whale (hap2 2023 refseq)[IGV] |
Balaenoptera ricei |
GCF_028023285.1_mBalRic1.hap2 |
SAMN32629060 |
PRJNA921698 |
2023-01-30 |
| 489 |
Rickett's big-footed myotis (AB-2021 2024)[IGV] |
Myotis ricketti |
GCA_036010255.1_ASM3601025v1 |
SAMN35325326 |
PRJNA975353 |
2024-01-23 |
| 490 |
Ryukyu mouse (v2 2017)[IGV] |
Mus caroli |
GCF_900094665.2_CAROLI_EIJ_v1.1 |
SAMEA3367631 |
PRJEB14895 |
2017-04-28 |
| 491 |
Saanen dairy goat[IGV] |
Capra hircus |
GCA_015443085.1_Saanen_v1 |
SAMN14408556 |
PRJNA613503 |
2020-11-16 |
| 492 |
saddleback dolphin (alternate hap 2023)[IGV] |
Delphinus delphis |
GCA_949987525.1_mDelDel1.1_alternate_haplotype |
SAMEA111380534 |
PRJEB61572 |
2023-04-29 |
| 493 |
saddleback dolphin (primary hap 2023 refseq)[IGV] |
Delphinus delphis |
GCF_949987515.1_mDelDel1.1 |
SAMEA111380534 |
PRJEB61571 |
2023-05-01 |
| 494 |
saiga antelope[IGV] |
Saiga tatarica |
GCA_004024985.1_SaiTat_v1_BIUU |
SAMN07678151 |
PRJNA399418 |
2019-01-15 |
| 495 |
Schreibers' long-fingered bat (hap1 2024)[IGV] |
Miniopterus schreibersii |
GCA_964146895.1_mMinSch1.hap1.1 |
SAMEA113980738 |
PRJEB76208 |
2024-06-06 |
| 496 |
Schreibers' long-fingered bat (hap2 2024)[IGV] |
Miniopterus schreibersii |
GCA_964145185.1_mMinSch1.hap2.1 |
SAMEA113980738 |
PRJEB76207 |
2024-06-04 |
| 497 |
Schreibers' long-fingered bat (US075 2019)[IGV] |
Miniopterus schreibersii |
GCA_004026525.1_MinSch_v1_BIUU |
SAMN07678147 |
PRJNA399366 |
2019-01-16 |
| 498 |
scimitar-horned oryx[IGV] |
Oryx dammah |
GCF_014754425.2_SCBI_Odam_1.1 |
SAMN14518290 |
PRJNA622505 |
2020-09-25 |
| 499 |
Screaming hairy armadillo[IGV] |
Chaetophractus vellerosus |
GCA_004027955.1_ChaVel_v1_BIUU |
SAMN07678071 |
PRJNA399381 |
2019-01-16 |
| 500 |
sea otter (GAN:26980312 2017 refseq)[IGV] |
Enhydra lutris kenyoni |
GCF_002288905.1_ASM228890v2 |
SAMN07211055 |
PRJNA388419 |
2017-09-11 |
| 501 |
Seba's short-tailed bat[IGV] |
Carollia perspicillata |
GCA_004027735.1_CarPer_v1_BIUU |
SAMN07678055 |
PRJNA399439 |
2019-01-16 |
| 502 |
sheep (OAR_USU_Benz2616 2023)[IGV] |
Ovis aries |
GCF_016772045.2_ARS-UI_Ramb_v3.0 |
n/a |
PRJNA675594 |
2023-07-20 |
| 503 |
sheep (Texel 2015)[IGV] |
Ovis aries |
GCA_000298735.2_Oar_v4.0 |
SAMN00116405 |
PRJNA169880 |
2015-11-20 |
| 504 |
shrew mouse[IGV] |
Mus pahari |
GCF_900095145.1_PAHARI_EIJ_v1.1 |
SAMEA3367645 |
PRJEB14896 |
2017-04-28 |
| 505 |
Siberian hamster (SSSS 2022)[IGV] |
Phodopus sungorus |
GCA_023856395.1_Psun_UM_1.1 |
SAMN23733487 |
PRJNA786909 |
2022-06-29 |
| 506 |
Siberian musk deer (BS20 2019 Broad)[IGV] |
Moschus moschiferus |
GCA_004024705.1_MosMos_v1_BIUU |
SAMN07678096 |
PRJNA399405 |
2019-01-15 |
| 507 |
small Madagascar hedgehog[IGV] |
Echinops telfairi |
GCF_000313985.2_ASM31398v2 |
SAMN00216137 |
PRJNA12590 |
2019-07-15 |
| 508 |
smoky shrew (2023)[IGV] |
Sorex fumeus |
GCF_029834395.1_SorFum_2.1 |
SAMN33271612 |
PRJNA826195 |
2023-04-17 |
| 509 |
snow leopard (11264 2022)[IGV] |
Panthera uncia |
GCF_023721935.1_Puncia_PCG_1.0 |
SAMN13911153 |
PRJNA602938 |
2022-06-16 |
| 510 |
snowshoe hare[IGV] |
Lepus americanus |
GCA_004026855.1_LepAme_v1_BIUU |
SAMN07678042 |
PRJNA399359 |
2019-01-16 |
| 511 |
social tuco-tuco[IGV] |
Ctenomys sociabilis |
GCA_004027165.1_CteSoc_v1_BIUU |
SAMN07678051 |
PRJNA399368 |
2019-01-16 |
| 512 |
soprano pipistrelle (alternate hap 2023)[IGV] |
Pipistrellus pygmaeus |
GCA_949987765.1_mPipPyg2.1_alternate_haplotype |
SAMEA9921456 |
PRJEB61582 |
2023-04-29 |
| 513 |
soprano pipistrelle (primary hap 2023)[IGV] |
Pipistrellus pygmaeus |
GCA_949987585.1_mPipPyg2.1 |
SAMEA9921456 |
PRJEB61581 |
2023-05-01 |
| 514 |
South African ground squirrel[IGV] |
Xerus inauris |
GCA_004024805.1_XerIna_v1_BIUU |
SAMN07678119 |
PRJNA399425 |
2019-01-15 |
| 515 |
Southeastern Asian house mouse (2016)[IGV] |
Mus musculus castaneus |
GCA_001624445.1_CAST_EiJ_v1 |
SAMN04489822 |
PRJNA310854 |
2016-04-26 |
| 516 |
Southeastern Asian house mouse (2022)[IGV] |
Mus musculus castaneus |
GCA_921999005.2_CAST_EiJ_v3 |
SAMEA9544174 |
PRJEB47108 |
2022-07-01 |
| 517 |
Southeastern Asian house mouse (T2T 2024)[IGV] |
Mus musculus castaneus |
GCA_964188545.1_CAST_EiJ_T2T_v1 |
SAMEA115765482 |
PRJEB47108 |
2024-06-23 |
| 518 |
southern elephant seal[IGV] |
Mirounga leonina |
GCF_011800145.1_KU_Mleo_1.0 |
SAMN13282320 |
PRJNA587380 |
2020-03-31 |
| 519 |
southern grasshopper mouse (2020)[IGV] |
Onychomys torridus |
GCF_903995425.1_mOncTor1.1 |
SAMEA104026389 |
PRJEB39770 |
2020-08-21 |
| 520 |
southern multimammate mouse[IGV] |
Mastomys coucha |
GCF_008632895.1_UCSF_Mcou_1 |
SAMN07635206 |
PRJNA406979 |
2019-09-24 |
| 521 |
southern tamandua (mTamTet1 alternate hap 2022)[IGV] |
Tamandua tetradactyla |
GCA_023853755.1_mTamTet1.alt |
SAMN12612337 |
PRJNA561940 |
2022-06-22 |
| 522 |
southern tamandua (mTamTet1 primary hap 2022)[IGV] |
Tamandua tetradactyla |
GCA_023851605.1_mTamTet1.pri |
SAMN12612337 |
PRJNA561939 |
2022-06-22 |
| 523 |
southern three-banded armadillo[IGV] |
Tolypeutes matacus |
GCA_004025125.1_TolMat_v1_BIUU |
SAMN07678115 |
PRJNA399423 |
2019-01-15 |
| 524 |
southern two-toed sloth (mChoDid1 alternate hap 2020)[IGV] |
Choloepus didactylus |
GCA_015220265.1_mChoDid1.alt |
SAMN12612024 |
PRJNA561938 |
2020-11-02 |
| 525 |
southern two-toed sloth (mChoDid1 primary hap 2020)[IGV] |
Choloepus didactylus |
GCF_015220235.1_mChoDid1.pri |
SAMN12612024 |
PRJNA561937 |
2020-11-03 |
| 526 |
southern white rhinoceros (SDZICR_KB13650 2012 refseq)[IGV] |
Ceratotherium simum simum |
GCF_000283155.1_CerSimSim1.0 |
SAMN00778988 |
PRJNA74583 |
2012-07-31 |
| 527 |
Sowerby's beaked whale (hap1 2024)[IGV] |
Mesoplodon bidens |
GCA_964165515.1_mMesBid2.hap1.1 |
SAMEA112165298 |
PRJEB76218 |
2024-06-06 |
| 528 |
Sowerby's beaked whale (hap2 2024)[IGV] |
Mesoplodon bidens |
GCA_964148845.1_mMesBid2.hap2.1 |
SAMEA112165298 |
PRJEB76217 |
2024-06-06 |
| 529 |
Sowerby's beaked whale (US080 2019)[IGV] |
Mesoplodon bidens |
GCA_004027085.1_MesBid_v1_BIUU |
SAMN07678145 |
PRJNA399476 |
2019-01-16 |
| 530 |
sperm whale (SW-GA 2023)[IGV] |
Physeter catodon |
GCF_002837175.3_ASM283717v5 |
SAMN07836523 |
PRJNA411766 |
2023-02-28 |
| 531 |
star-nosed mole[IGV] |
Condylura cristata |
GCF_000260355.1_ConCri1.0 |
SAMN00727830 |
PRJNA72447 |
2012-05-01 |
| 532 |
Steller sea lion[IGV] |
Eumetopias jubatus |
GCF_004028035.1_ASM402803v1 |
SAMN09402722 |
PRJNA475770 |
2019-01-15 |
| 533 |
Stephens's kangaroo rat[IGV] |
Dipodomys stephensi |
GCA_004024685.1_DipSte_v1_BIUU |
SAMN07678080 |
PRJNA399390 |
2019-01-15 |
| 534 |
steppe mouse (ZRU 2018)[IGV] |
Mus spicilegus |
GCA_003336285.1_MUSP714 |
SAMN08141584 |
PRJNA421365 |
2018-07-23 |
| 535 |
straw-colored fruit bat[IGV] |
Eidolon helvum |
GCA_000465285.1_ASM46528v1 |
SAMN02212690 |
PRJNA209406 |
2013-09-13 |
| 536 |
stripe-headed round-eared bat[IGV] |
Tonatia bakeri |
GCA_004024845.1_TonSau_v1_BIUU |
SAMN07678031 |
PRJNA399356 |
2019-01-15 |
| 537 |
striped dolphin (alternate hap 2023)[IGV] |
Stenella coeruleoalba |
GCA_951394445.1_mSteCoe1.1_alternate_haplotype |
SAMEA111380539 |
PRJEB62075 |
2023-05-13 |
| 538 |
striped dolphin (primary hap 2023)[IGV] |
Stenella coeruleoalba |
GCA_951394435.1_mSteCoe1.1 |
SAMEA111380539 |
PRJEB62076 |
2023-06-16 |
| 539 |
striped hyena (BS54 2019 Broad)[IGV] |
Hyaena hyaena |
GCA_004023945.1_HyaHya_v1_BIUU |
SAMN07678047 |
PRJNA399363 |
2019-01-15 |
| 540 |
striped hyena (Hyena2069 2018 Potsdam U)[IGV] |
Hyaena hyaena |
GCF_003009895.1_ASM300989v1 |
SAMN07212965 |
PRJNA390068 |
2018-03-19 |
| 541 |
sugar glider (PSGF00001 2023)[IGV] |
Petaurus breviceps papuanus |
GCA_028583685.1_PetGlider_PUasm1.0 |
SAMN29152153 |
PRJNA849992 |
2023-02-10 |
| 542 |
Sumatran rhinoceros (Ipuh 2017)[IGV] |
Dicerorhinus sumatrensis sumatrensis |
GCA_002844835.1_ASM284483v1 |
SAMN07833945 |
PRJNA415733 |
2017-12-19 |
| 543 |
Sunda flying lemur (2014 WashU)[IGV] |
Galeopterus variegatus |
GCF_000696425.1_G_variegatus-3.0.2 |
SAMN01758971 |
PRJNA20511 |
2014-06-05 |
| 544 |
Sunda flying lemur (US047 2019 Broad)[IGV] |
Galeopterus variegatus |
GCA_004027255.1_GalVar_v1_BIUU |
SAMN07678019 |
PRJNA399345 |
2019-01-16 |
| 545 |
tailed tailless bat[IGV] |
Anoura caudifer |
GCA_004027475.1_AnoCau_v1_BIUU |
SAMN07678033 |
PRJNA399350 |
2019-01-16 |
| 546 |
takin (Tak-1 2022)[IGV] |
Budorcas taxicolor |
GCF_023091745.1_Takin1.1 |
SAMN22814979 |
PRJNA776710 |
2022-04-22 |
| 547 |
Talazac's shrew tenrec[IGV] |
Nesogale talazaci |
GCA_004026705.1_MicTal_v1_BIUU |
SAMN07678058 |
PRJNA399450 |
2019-01-16 |
| 548 |
tammar wallaby (mMacEug1 alternate hap 2023)[IGV] |
Notamacropus eugenii |
GCA_028389975.1_mMacEug1.alt |
SAMN28408687 |
PRJNA838351 |
2023-02-01 |
| 549 |
tammar wallaby (mMacEug1 primary hap 2023)[IGV] |
Notamacropus eugenii |
GCA_028372415.1_mMacEug1.pri |
SAMN28408687 |
PRJNA838350 |
2023-02-06 |
| 550 |
Tasmanian devil[IGV] |
Sarcophilus harrisii |
GCF_902635505.1_mSarHar1.11 |
SAMEA6099886 |
PRJEB35073 |
2019-11-07 |
| 551 |
thirteen-lined ground squirrel (2021 HiC)[IGV] |
Ictidomys tridecemlineatus |
GCF_016881025.1_HiC_Itri_2 |
SAMN08111062 |
PRJNA647389 |
2021-02-17 |
| 552 |
Tibetan sand fox (lyu1992 2022)[IGV] |
Vulpes ferrilata |
GCA_024500485.1_ASM2450048v1 |
SAMN22073298 |
PRJNA768988 |
2022-08-01 |
| 553 |
tiger[IGV] |
Panthera tigris |
GCF_018350195.1_P.tigris_Pti1_mat1.1 |
SAMN17054330 |
PRJNA684344 |
2021-05-13 |
| 554 |
Townsend's big-eared bat (haplotype 1 of 2 COTO_CA2020_CCGP 2022)[IGV] |
Corynorhinus townsendii |
GCA_026230055.1_mCorTow1.0.hap1 |
SAMN31536067 |
PRJNA896196 |
2022-11-18 |
| 555 |
Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022)[IGV] |
Corynorhinus townsendii |
GCA_026230045.1_mCorTow1.0.hap2 |
SAMN31536067 |
PRJNA896195 |
2022-11-18 |
| 556 |
Transcaucasian mole vole[IGV] |
Ellobius lutescens |
GCA_001685075.1_ASM168507v1 |
SAMN04317027 |
PRJNA305123 |
2016-07-14 |
| 557 |
Upper Galilee mountains blind mole rat (2095 2014 refseq)[IGV] |
Nannospalax galili |
GCF_000622305.1_S.galili_v1.0 |
SAMN02299330 |
PRJNA213569 |
2014-06-05 |
| 558 |
Vancouver Island marmot (RANI-1049 2019)[IGV] |
Marmota vancouverensis |
GCA_005458795.1_GSC_VIM_1.0 |
SAMN09425912 |
PRJNA476112 |
2019-05-16 |
| 559 |
vaquita (alternate hap mPhoSin1 2019)[IGV] |
Phocoena sinus |
GCA_008692045.1_mPhoSin1.alt |
SAMN12325353 |
PRJNA557832 |
2019-09-24 |
| 560 |
vaquita (mPhoSin1 2019)[IGV] |
Phocoena sinus |
GCF_008692025.1_mPhoSin1.pri |
SAMN12325353 |
PRJNA557831 |
2019-09-26 |
| 561 |
water buffalo (Mediterranean 2018)[IGV] |
Bubalus bubalis |
GCF_003121395.1_ASM312139v1 |
SAMN08640746 |
PRJNA437177 |
2018-05-14 |
| 562 |
water buffalo (Murrah 2021)[IGV] |
Bubalus bubalis |
GCF_019923935.1_NDDB_SH_1 |
SAMN11104991 |
PRJNA525182 |
2021-09-10 |
| 563 |
Weddell seal (WS11-02 2013 refseq)[IGV] |
Leptonychotes weddellii |
GCF_000349705.1_LepWed1.0 |
SAMN00672463 |
PRJNA68235 |
2013-03-29 |
| 564 |
western European hedgehog (2012 refseq)[IGV] |
Erinaceus europaeus |
GCF_000296755.1_EriEur2.0 |
SAMN00760989 |
PRJNA74585 |
2012-09-19 |
| 565 |
western European hedgehog (alternate hap 2023)[IGV] |
Erinaceus europaeus |
GCA_950295305.1_mEriEur2.1_alternate_haplotype |
SAMEA13207416 |
PRJEB61757 |
2023-05-01 |
| 566 |
western European hedgehog (primary hap 2023 refseq)[IGV] |
Erinaceus europaeus |
GCF_950295315.1_mEriEur2.1 |
SAMEA13207416 |
PRJEB61758 |
2023-05-01 |
| 567 |
western European house mouse (WSB_EiJ v3 2022)[IGV] |
Mus musculus domesticus |
GCA_921998345.2_WSB_EiJ_v3 |
SAMEA9544176 |
PRJEB47108 |
2022-07-01 |
| 568 |
western spotted skunk[IGV] |
Spilogale gracilis |
GCA_004023965.1_SpiGra_v1_BIUU |
SAMN07678050 |
PRJNA399437 |
2019-01-15 |
| 569 |
western wild mouse (SPRET_EiJ v3 2022)[IGV] |
Mus spretus |
GCA_921997135.2_SPRET_EiJ_v3 |
SAMEA9544175 |
PRJEB47108 |
2022-06-30 |
| 570 |
whiskered bat (hap1 2024)[IGV] |
Myotis mystacinus |
GCA_964094495.2_mMyoMys1.hap1.1 |
SAMEA114250307 |
PRJEB76004 |
2024-06-12 |
| 571 |
whiskered bat (hap2 2024)[IGV] |
Myotis mystacinus |
GCA_964195625.1_mMyoMys1.hap2.1 |
SAMEA114250307 |
PRJEB76003 |
2024-06-30 |
| 572 |
white-beaked dolphin (alternate hap 2023)[IGV] |
Lagenorhynchus albirostris |
GCA_949774935.1_mLagAlb1.1_alternate_haplotype |
SAMEA111380537 |
PRJEB60993 |
2023-04-09 |
| 573 |
white-beaked dolphin (primary hap 2023 refseq)[IGV] |
Lagenorhynchus albirostris |
GCF_949774975.1_mLagAlb1.1 |
SAMEA111380537 |
PRJEB60994 |
2023-04-08 |
| 574 |
white-footed mouse[IGV] |
Peromyscus leucopus |
GCF_004664715.2_UCI_PerLeu_2.1 |
SAMN03488028 |
PRJNA281425 |
2020-10-02 |
| 575 |
white-tailed deer (Pink-7 2017 refseq)[IGV] |
Odocoileus virginianus texanus |
GCF_002102435.1_Ovir.te_1.0 |
SAMN05363940 |
PRJNA317745 |
2017-04-20 |
| 576 |
white-toothed pygmy shrew (mSunEtr1 alternate hap 2022)[IGV] |
Suncus etruscus |
GCA_024140225.1_mSunEtr1.alt.cur |
SAMN28420931 |
PRJNA839355 |
2022-07-05 |
| 577 |
white-toothed pygmy shrew (mSunEtr1 primary hap 2022)[IGV] |
Suncus etruscus |
GCF_024139225.1_mSunEtr1.pri.cur |
SAMN28420931 |
PRJNA838699 |
2022-07-06 |
| 578 |
wild Bactrian camel (BCGSAC Cfer 1.0 YT-003-E 2020)[IGV] |
Camelus ferus |
GCF_009834535.1_BCGSAC_Cfer_1.0 |
SAMN12102236 |
PRJNA550024 |
2020-01-08 |
| 579 |
wild Bactrian camel (CB1 Naran 2013 refseq)[IGV] |
Camelus ferus |
GCF_000311805.1_CB1 |
SAMN01910617 |
PRJNA76177 |
2013-07-30 |
| 580 |
wild goat[IGV] |
Capra aegagrus |
GCA_000978405.1_CapAeg_1.0 |
SAMN03282421 |
PRJNA261263 |
2015-04-24 |
| 581 |
wild yak[IGV] |
Bos mutus |
GCF_000298355.1_BosGru_v2.0 |
SAMN00744358 |
PRJNA74739 |
2013-01-09 |
| 582 |
woodchuck (v1.1 L192 2022)[IGV] |
Marmota monax |
GCF_021218885.2_Marmota_monax_Labrador192_F-V1.1 |
SAMN21332666 |
PRJNA761405 |
2022-08-11 |
| 583 |
woodland dormouse[IGV] |
Graphiurus murinus |
GCA_004027655.1_GraMur_v1_BIUU |
SAMN07678085 |
PRJNA399395 |
2019-01-16 |
| 584 |
woodland thicket rat[IGV] |
Grammomys surdaster |
GCF_004785775.1_NIH_TR_1.0 |
SAMN11172698 |
PRJNA526040 |
2019-04-12 |
| 585 |
Yangtze finless porpoise (v2 wild 2018 refseq)[IGV] |
Neophocaena asiaeorientalis asiaeorientalis |
GCF_003031525.2_Neophocaena_asiaeorientalis_V1.1 |
SAMN05831577 |
PRJNA343136 |
2018-04-03 |
| 586 |
Yangtze River dolphin (v1.1 BGI 2013 refseq)[IGV] |
Lipotes vexillifer |
GCF_000442215.2_Lipotes_vexillifer_v1.1 |
SAMN02953859 |
PRJNA174066 |
2013-07-24 |
| 587 |
yellow-bellied marmot (SJ_83 v2.1 2019)[IGV] |
Marmota flaviventris |
GCF_003676075.3_GSC_YBM_2.1 |
SAMN10078668 |
PRJNA491472 |
2019-05-24 |
| 588 |
yellow-footed antechinus (v2 Samford, QLD, Australia AdamAnt 2021)[IGV] |
Antechinus flavipes |
GCF_016432865.1_AdamAnt_v2 |
SAMN16807749 |
PRJNA565840 |
2021-01-06 |
| 589 |
yellow-spotted hyrax[IGV] |
Heterohyrax brucei |
GCA_004026845.1_HetBruBak_v1_BIUU |
SAMN07678088 |
PRJNA399398 |
2019-01-16 |
| 590 |
yellow-spotted hyrax (mHetBru1 2023)[IGV] |
Heterohyrax brucei |
GCA_028571685.1_mHetBru1.pri |
SAMN33092455 |
PRJNA931597 |
2023-02-10 |
| 591 |
yellow-spotted hyrax (mHetBru1 alternate hap 2023)[IGV] |
Heterohyrax brucei |
GCA_028571665.1_mHetBru1.alt |
SAMN33092455 |
PRJNA931598 |
2023-02-08 |
| 592 |
Yuma myotis (MYYU_CA2020_CCGP alternate hap 2023)[IGV] |
Myotis yumanensis |
GCA_028536395.1_mMyoYum1.0.hap2 |
SAMN30526064 |
PRJNA887415 |
2023-02-07 |
| 593 |
Yuma myotis (MYYU_CA2020_CCGP primary hap 2023)[IGV] |
Myotis yumanensis |
GCA_028538775.1_mMyoYum1.0.hap1 |
SAMN30526064 |
PRJNA887416 |
2023-02-10 |
| 594 |
zebu cattle (Hainan HN024 2024)[IGV] |
Bos indicus |
GCA_039881165.1_ASM3988116v1 |
SAMN26237614 |
PRJNA810280 |
2024-05-29 |
| 595 |
zebu cattle (Nelore 2014 refseq)[IGV] |
Bos indicus |
GCF_000247795.1_Bos_indicus_1.0 |
SAMN02953802 |
PRJNA72827 |
2014-11-25 |