VGP - Vertebrate Genomes Project assembly hubs, assembly statistics

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This assembly hub contains assemblies released by the Vertebrate Genomes Project. (set of primary assemblies)

See also: hub access, track statistics


Data resource links

NOTE: Click on the column headers to sort the table by that column
The link to genome browser will attach only that single assembly to the genome browser.
count common name
link to genome browser		 scientific name
and data download		 NCBI assembly sequence
count		genome size
nucleotides		 gap
count		unknown bases
(gap size sum)		masking
percent
1 Abyssinian ground-hornbill Bucorvus abyssinicus GCA_009769605.1_bBucAby1.pri 112 1,132,597,561 204 8,074,542 19.24
2 Acadian redfish (fSebFas1 primary hap 2024) Sebastes fasciatus GCA_043250625.1_fSebFas1.pri 203 833,835,073 471 84,200 37.97
3 Aeolian wall lizard (rPodRaf1 primary hap 2022) Podarcis raffonei GCF_027172205.1_rPodRaf1.pri 27 1,513,131,503 30 23,116 38.30
4 African grass rat (paternal X 2020) Arvicanthis niloticus GCF_011762505.1_mArvNil1.pat.X 1,595 2,496,761,438 1,624 20,289,527 37.17
5 African hunting dog (LycPic1hap2 2024) Lycaon pictus GCA_040955705.1_LycPic1.final.hap2 76 2,384,012,108 91 9,100 33.73
6 African ostrich (bStrCam1hap1 2024) Struthio camelus GCF_040807025.1_bStrCam1.hap1 262 1,452,018,929 116 23,200 24.25
7 African savanna elephant (hap2 2023) Loxodonta africana GCF_030014295.1_mLoxAfr1.hap2 879 3,540,876,381 231 3,688,568 49.48
8 African savanna elephant (hap2 mLoxAfr1 2023) Loxodonta africana GCA_030014295.1_mLoxAfr1.hap2 880 3,540,893,228 231 3,688,568 49.48
9 Alvarez's mastiff bat (A012 2023) Molossus alvarezi GCA_031001765.1_BBF_mMolAlv_v1 187 2,395,140,990 1,182 236,400 38.99
10 Alvarez's mastiff bat (hap1 2024) Molossus alvarezi GCA_037157525.1_mMolAlv2.hap1 326 2,478,684,717 80 12,700 40.83
11 American alligator (2023 refseq) Alligator mississippiensis GCF_030867095.1_rAllMis1 195 2,346,795,873 161 16,453,847 42.90
12 American flamingo Phoenicopterus ruber ruber GCA_009819775.1_bPhoRub2.pri 90 1,246,226,932 280 8,602,116 20.94
13 American mink (hap1 2024) Neogale vison GCA_964106545.1_mNeoVis2.hap1.1 435 2,697,147,479 2,957 591,400 38.00
14 American pika (hap1 2023) Ochotona princeps GCF_030435755.1_mOchPri1.hap1 5,864 2,555,444,530 432 86,229 43.65
15 American shad Alosa sapidissima GCF_018492685.1_fAloSap1.pri 74 903,581,644 1,639 4,995,812 39.49
16 amphioxus (hap2 2024) Branchiostoma lanceolatum GCA_035083965.1_klBraLanc5.hap2 34 458,287,516 103 15,500 27.49
17 Andian cavefish (hap1 2023) Trichomycterus rosablanca GCF_030014385.1_fTriRos1.hap1 349 1,045,025,885 198 39,600 49.04
18 Anna's hummingbird Calypte anna GCF_003957555.1_bCalAnn1_v1.p 159 1,059,687,259 429 16,096,788 20.87
19 Antarctic jonasfish (primary hap 2024) Notolepis coatsorum GCA_963971535.1_fNotCoa1.1 5,983 3,427,809,033 15,113 3,020,567 68.42
20 Antarctic lanternfish (primary hap 2023) Electrona antarctica GCA_951216825.1_fEleAnt2.1 1,901 1,427,445,741 3,179 635,800 52.88
21 Arabian camel (mCamDro1 2024) Camelus dromedarius GCF_036321535.1_mCamDro1.pat 171 2,306,603,094 195 39,000 33.51
22 Arabian camel (paternal hap 2024) Camelus dromedarius GCA_036321535.1_mCamDro1.pat 172 2,306,619,778 195 39,000 33.51
23 Arctic char (CBP00131 primary hap 2024) Salvelinus alpinus oquassa GCA_036784965.1_fSalAlp2_p1.0 1,169 2,129,031,653 3,235 647,000 58.15
24 Aristotle's catfish (2022) Silurus aristotelis GCA_946808225.1_fSilAri3.1 241 800,118,513 795 159,000 42.15
25 Asian bonytongue Scleropages formosus GCF_900964775.1_fSclFor1.1 72 784,563,014 145 41,360 26.53
26 Asiatic elephant (mEleMax1 primary hap 2022) Elephas maximus indicus GCF_024166365.1_mEleMax1_primary_haplotype 64 3,401,247,148 126 3,333,681 48.67
27 Asiatic tapir (hap2 2023) Tapirus indicus GCA_031878705.1_mTapInd1.hap2 193 2,477,445,429 92 18,400 38.23
28 Atlantic bluefin tuna (primary hap 2024) Thunnus thynnus GCA_963924715.1_fThuThy2.1 120 799,063,593 468 93,600 33.12
29 Atlantic bluefin tuna (primary hap 2024) Thunnus thynnus GCF_963924715.1_fThuThy2.1 119 799,047,066 468 93,600 33.12
30 Atlantic cod Gadus morhua GCF_902167405.1_gadMor3.0 227 669,966,409 1,216 23,573,743 33.47
31 Atlantic hagfish (primary hap 2024) Myxine glutinosa GCA_964187855.1_kmMyxGlut1.1 4,004 3,057,523,704 4,412 882,096 74.33
32 Atlantic halibut (refseq) Hippoglossus hippoglossus GCF_009819705.1_fHipHip1.pri 57 596,792,615 290 3,413,390 24.17
33 Atlantic horse mackerel (2021) Trachurus trachurus GCA_905171665.2_fTraTra1.2 153 801,243,942 222 29,162 32.85
34 Atlantic mackerel (primary hap 2023) Scomber scombrus GCA_963691925.1_fScoSco1.1 666 764,157,853 1,489 297,822 29.96
35 Atlantic mackerel (primary hap 2023) Scomber scombrus GCF_963691925.1_fScoSco1.1 665 764,141,294 1,489 297,822 29.96
36 Atlantic stingray (hap1 2023 genbank) Hypanus sabinus GCA_030144855.1_sHypSab1.hap1 2,990 4,044,886,845 1,648 329,600 51.80
37 Atlantic stingray (hap1 2023 refseq) Hypanus sabinus GCF_030144855.1_sHypSab1.hap1 2,989 4,044,869,043 1,648 329,600 51.80
38 Atlantic white-sided dolphin (mLagAcu1.hap1.1 2024) Lagenorhynchus acutus GCA_964270905.1_mLagAcu1.hap1.1 899 2,676,209,414 1,034 206,800 41.93
39 Australian echidna (mTacAcu1 primary hap 2020) Tachyglossus aculeatus GCF_015852505.1_mTacAcu1.pri 310 2,213,004,214 524 30,817,383 55.70
40 ballan wrasse (primary hap 2024 refseq) Labrus bergylta GCF_963930695.1_fLabBer1.1 131 720,210,020 815 163,000 30.38
41 ballan wrasse (primary hap 2024) Labrus bergylta GCA_963930695.1_fLabBer1.1 132 720,227,340 815 163,000 30.38
42 band-tailed pigeon (hap2 2024 refseq) Patagioenas fasciata GCF_036971685.1_bPatFas1.hap2 452 1,410,041,145 219 8,369,264 31.76
43 band-tailed pigeon (hap2 2024) Patagioenas fasciata GCA_036971685.1_bPatFas1.hap2 453 1,410,058,165 219 8,369,264 31.75
44 banded archerfish Toxotes jaculatrix GCF_017976425.1_fToxJac2.pri 96 621,503,431 98 1,137,472 28.10
45 banded killifish (hap1 2024) Fundulus diaphanus GCA_037039145.1_fFunDia1.hap1 331 1,351,828,608 293 3,461,740 50.48
46 barbel (2022) Barbus barbus GCA_936440315.1_fBarBab1.1 92 1,584,929,904 108 21,600 52.50
47 barn swallow (bHirRus1 v3 primary hap 2021 refseq) Hirundo rustica GCF_015227805.2_bHirRus1.pri.v3 617 1,105,955,550 1,102 25,534,411 21.06
48 basking shark (sCetMax3.hap1.1 2024) Cetorhinus maximus GCA_964194155.1_sCetMax3.hap1.1 5,088 3,993,866,540 2,778 555,635 65.99
49 bats (hap1 2024) Artibeus intermedius GCA_038363145.1_mArtInt1.hap1 419 2,293,600,955 81 12,100 34.66
50 Bellinger river turtle (BRST_UC0152H_USYD 2024) Myuchelys georgesi GCA_040894355.1_rMyuGeo1.pri.20230808 129 1,980,051,792 57 11,400 26.49
51 big brown bat (TK198812 2023) Eptesicus fuscus GCF_027574615.1_DD_ASM_mEF_20220401 48 2,008,057,866 75 28,557 37.06
52 bilby (mMagLag1 2024) Macrotis lagotis GCA_037893015.1_bilby.v1.9.chrom.fasta 609 3,655,732,635 4,431 12,523,912 43.71
53 bird A.albertisi (hap1 2024) Aegotheles albertisi GCA_039906565.1_bAegAlb1.hap1 592 1,167,497,019 439 87,800 21.86
54 bird E.chinensis (hap2 2024) Excalfactoria chinensis GCA_039878825.1_bCotChi1.hap2 191 966,847,183 330 63,200 20.52
55 bird N.grandis (bNycGra1 primary hap 2020) Nyctibius grandis GCF_013368605.1_bNycGra1.pri 190 1,256,393,467 243 6,139,133 23.97
56 bird P.pipra (hap1 2024) Pseudopipra pipra GCF_036250125.1_bDixPip1.hap1 696 1,165,201,947 323 64,600 21.92
57 black and rufous elephant shrew (mRhyPet1hap1 2024) Rhynchocyon petersi GCA_043290085.1_mRhyPet1.hap1 469 5,620,370,870 770 153,831 14.57
58 black goby (primary hap 2023) Gobius niger GCA_951799975.1_fGobNig1.1 298 870,572,126 636 127,200 40.54
59 black rhinoceros (mBicDic1 primary hap 2021 refseq) Diceros bicornis minor GCF_020826845.1_mDicBic1.mat.cur 1,076 3,005,535,620 215 1,368,861 40.15
60 black-capped chickadee (bPoeAtr1 2023) Poecile atricapillus GCF_030490865.1_bPoeAtr1.hap1 307 1,251,133,642 404 958,949 24.42
61 black-headed gull (primary hap 2024) Chroicocephalus ridibundus GCA_963924245.1_bChrRid1.1 729 1,417,571,123 462 92,400 31.33
62 black-headed gull (primary hap 2024) Chroicocephalus ridibundus GCF_963924245.1_bChrRid1.1 728 1,417,554,307 462 92,400 31.33
63 black-legged kittiwake (bRisTri1 2023 refseq) Rissa tridactyla GCF_028500815.1_bRisTri1.patW.cur.20221130 716 1,353,621,101 283 786,373 26.72
64 blackbelly eelpout (fLycPai1 haplotype 2 2023) Lycodopsis pacificus GCA_028022725.1_fLycPai1.hap2 109 646,369,862 366 73,200 29.94
65 blackcap Sylvia atricapilla GCA_009819655.1_bSylAtr1.pri 189 1,066,786,587 413 11,925,354 19.80
66 blackcap (primary hap 2019 refseq) Sylvia atricapilla GCF_009819655.1_bSylAtr1.pri 190 1,066,804,524 413 11,925,354 19.80
67 blacktail shiner (hap2 2024) Cyprinella venusta GCA_038024135.1_fCypVen1.hap2 413 928,717,837 720 134,500 47.57
68 Blainville's beaked whale (mMesDen1 primary hap 2022) Mesoplodon densirostris GCA_025265405.1_mMesDen1_primary_haplotype 73 2,683,375,131 97 700,303 41.79
69 Blainville's beaked whale (primary hap 2022 refseq) Mesoplodon densirostris GCF_025265405.1_mMesDen1_primary_haplotype 74 2,683,391,478 97 700,303 41.79
70 blonde ray (primary hap 2023) Raja brachyura GCA_963514005.1_sRajBra1.1 1,647 2,700,467,673 2,269 453,800 66.30
71 blue whale (JJ_BM4_2016_0621 v3 primary hap 2020) Balaenoptera musculus GCF_009873245.2_mBalMus1.pri.v3 106 2,374,868,943 886 25,937,142 43.76
72 blue whiting (primary hap 2024) Micromesistius poutassou GCA_964030765.1_fMicPou1.1 3,832 520,636,573 3,055 611,000 35.17
73 blue-and-yellow macaw (hap1 2023) Ara ararauna GCA_028858755.1_bAraAra1.hap1 246 1,224,360,198 107 988,129 24.87
74 blunt-snouted clingfish (v2 2020 genbank) Gouania willdenowi GCA_900634775.2_fGouWil2.2 442 937,169,869 1,160 14,353,515 42.93
75 Boeseman's rainbowfish Melanotaenia boesemani GCF_017639745.1_fMelBoe1.pri 93 865,592,457 440 3,217,901 29.18
76 Bolin's lanternfish (primary hap 2024) Protomyctophum bolini GCA_963924005.1_fProBol1.1 951 1,148,224,649 1,785 357,000 47.04
77 bonti-bonti (T.bonti 2022) Telmatherina bonti GCA_933228915.1_fTelBon1.1 146 986,039,709 1,329 265,800 40.16
78 pencil smelt N.antarctica (primary hap 2024) Nansenia antarctica GCA_963989245.1_fNanAnt1.1 1,177 1,085,794,659 3,299 659,800 48.79
79 rough bullseye P.klunzingeri (RE-2024b hap1 2024) Pempheris klunzingeri GCA_042242105.1_fPemKlu1.hap1 441 646,252,061 87 17,200 30.17
80 Malawi cichlid R.sp.'chilingali' (2024) Rhamphochromis sp. 'chilingali' GCA_963969265.1_fRhaChi2.1 82 921,184,210 422 84,400 38.20
81 Bornean orangutan (v2 AG05252 primary hap 2024 refseq) Pongo pygmaeus GCF_028885625.2_NHGRI_mPonPyg2-v2.0_pri 26 3,220,951,552 8 8,000,000 54.51
82 Botta's pocket gopher (hap1 2023) Thomomys bottae GCA_031878675.1_mThoBot2.hap1 630 2,025,650,949 775 154,825 40.80
83 boutu (hap1 2024) Inia geoffrensis GCA_036417435.1_mIniGeo1.hap1 903 2,749,362,370 284 56,265 42.66
84 bowfin (fAmiCal2hap1 2024) Amia calva GCF_036373705.1_fAmiCal2.hap1 389 989,103,751 97 19,400 37.74
85 bowfin (hap1 2024) Amia calva GCA_036373705.1_fAmiCal2.hap1 390 989,120,851 97 19,400 37.74
86 Brauer's lanternfish (primary hap 2023) Gymnoscopelus braueri GCA_963280865.1_fGymBra2.1 676 1,367,984,568 2,704 540,800 49.78
87 Brazilian free-tailed bat (primary hap 2023) Tadarida brasiliensis GCA_030848825.1_DD_mTadBra1_pri 148 2,283,188,801 20 5,952 36.16
88 Brazilian merganser (hap1 2024) Mergus octosetaceus GCA_036873955.1_bMerOct1.hap1 569 1,245,791,205 327 56,959 28.52
89 Brown anole (rAnoSag1 2024) Anolis sagrei GCA_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
90 Brown anole (rAnoSag1 2024) Anolis sagrei GCF_037176765.1_rAnoSag1.mat 29 1,950,830,970 191 38,200 46.73
91 brown argus butterfly Aricia agestis GCF_905147365.1_ilAriAges1.1 25 435,265,205 4 734 48.47
92 brown big-eared bat (primary hap 2023) Plecotus auritus GCA_963455305.1_mPleAur1.1 65 2,163,221,563 1,237 247,441 39.67
93 budgerigar (paternal Z) Melopsittacus undulatus GCF_012275295.1_bMelUnd1.mat.Z 864 1,171,617,451 284 3,236,129 22.13
94 butterfish (2021 G10K) Scatophagus argus GCF_020382885.2_fScaArg1.pri 48 570,802,272 77 1,711,559 21.27
95 butterfly blenny (primary hap 2023) Blennius ocellaris GCA_963422515.1_fBleOce1.1 525 728,745,255 1,625 325,000 32.58
96 California sea lion (v2 primary hap 2020) Zalophus californianus GCF_009762305.2_mZalCal1.pri.v2 47 2,409,685,272 185 18,537,776 43.36
97 Canada lynx (LIC74 v2 primary hap 2020) Lynx canadensis GCF_007474595.2_mLynCan4.pri.v2 54 2,407,810,255 842 2,779,346 43.72
98 Caribbean electric ray (hap2 2024) Narcine bancroftii GCA_036971175.1_sNarBan1.hap2 445 3,110,263,114 1,507 286,941 52.51
99 carmine bee-eater Merops nubicus GCA_009819595.1_bMerNub1.pri 109 1,149,356,202 269 6,055,062 21.59
100 chaffinch (primary hap 2023) Fringilla coelebs GCA_963513975.1_bFriCoe1.1 460 1,209,243,761 573 114,600 28.43
101 channel bull blenny Cottoperca gobio GCF_900634415.1_fCotGob3.1 322 609,391,784 445 2,553,975 28.72
102 chevron butterflyfish (hap1 2024) Chaetodon trifascialis GCA_039877785.1_fChaTrf1.hap1 37 662,505,520 49 9,600 23.31
103 chimpanzee (v2 AG18354 primary hap 2024 refseq) Pan troglodytes GCF_028858775.2_NHGRI_mPanTro3-v2.0_pri 26 3,177,756,316 5 5,000,000 49.97
104 Chinese pangolin (mManPen7 2023) Manis pentadactyla GCF_030020395.1_mManPen7.hap1 661 2,840,164,579 383 6,563,020 39.02
105 chub mackerel (fScoJap1 primary hap 2022) Scomber japonicus GCF_027409825.1_fScoJap1.pri 360 828,681,152 1,572 647,100 32.44
106 climbing perch (v1.3 2021) Anabas testudineus GCA_900324465.3_fAnaTes1.3 51 555,658,509 266 3,606,496 21.33
107 clouded leopard (mNeoNeb1 primary hap 2023 refseq) Neofelis nebulosa GCF_028018385.1_mNeoNeb1.pri 33 2,468,345,093 181 1,363,852 34.87
108 coelacanth (fLatCha1 primary hap 2024) Latimeria chalumnae GCF_037176945.1_fLatCha1.pri 197 2,947,609,019 154 30,632 54.45
109 common blue-tongued skink (hap2 2024) Tiliqua scincoides GCA_035046505.1_rTilSci1.hap2 350 1,623,332,312 372 74,400 37.07
110 common bottlenose dolphin (maternal Y refseq 2020) Tursiops truncatus GCF_011762595.1_mTurTru1.mat.Y 362 2,378,522,213 674 6,222,516 46.09
111 common bream (primary hap 2024) Abramis brama GCA_963993115.1_fAbrBra2.1 208 1,108,218,292 685 137,000 48.57
112 common brushtail (refseq 2020) Trichosurus vulpecula GCF_011100635.1_mTriVul1.pri 212 3,359,347,707 1,796 18,696,463 40.57
113 common buzzard (bButBut1.hap1.1 2024) Buteo buteo GCA_964188355.1_bButBut1.hap1.1 544 1,303,700,921 471 94,200 23.96
114 common cuckoo (bCucCan1 primary hap 2021 refseq) Cuculus canorus GCF_017976375.1_bCucCan1.pri 150 1,180,136,575 296 4,922,315 21.81
115 common dab (primary hap 2023) Limanda limanda GCF_963576545.1_fLimLim1.1 338 717,580,706 275 55,000 35.04
116 common goldeneye (primary hap 2024) Bucephala clangula GCA_964059595.1_bBucCla1.1 538 1,190,938,797 454 90,625 25.01
117 common lizard Z.vivipara (primary hap 2023) Zootoca vivipara GCF_963506605.1_rZooViv1.1 48 1,440,239,386 683 136,600 45.64
118 common moorhen (bGalChl1.hap1.1 2024) Gallinula chloropus GCA_964237585.1_bGalChl1.hap1.1 818 1,282,411,533 603 120,600 25.71
119 common myna (bArcTri1 primary hap 2023) Acridotheres tristis GCA_027559615.1_bAcrTri1.pri 455 1,193,419,045 435 2,422,523 28.14
120 common pipistrelle (2020) Pipistrellus pipistrellus GCA_903992545.1_mPipPip1.1 323 1,763,439,233 1,546 469,367 34.71
121 common pochard (bAytFer1.hap1.1 2024) Aythya ferina GCA_964211825.1_bAytFer1.hap1.1 862 1,252,319,576 474 94,800 27.88
122 common sole (primary hap 2023) Solea solea GCF_958295425.1_fSolSol10.1 242 643,757,955 373 74,600 32.91
123 common spadefoot toad (aPelFus1 2024) Pelobates fuscus GCA_036172605.1_aPelFus1.pri 160 3,606,474,367 349 69,626 51.45
124 common spadefoot toad (aPelFus1 2024) Pelobates fuscus GCF_036172605.1_aPelFus1.pri 159 3,606,456,729 349 69,626 51.45
125 common swift (bApuApu2 2021 refseq) Apus apus GCF_020740795.1_bApuApu2.pri.cur 110 1,100,378,261 256 1,747,529 21.21
126 common tern Sterna hirundo GCA_009819605.1_bSteHir1.pri 123 1,229,972,541 205 10,364,610 21.00
127 common toad Bufo bufo GCF_905171765.1_aBufBuf1.1 1,306 5,044,744,194 4,199 9,878,258 62.71
128 common vampire bat (HL8 primary hap 2022 genbank) Desmodus rotundus GCA_022682495.1_HLdesRot8A 572 2,113,473,284 611 255,063 32.58
129 common vampire bat (HL8 primary hap 2022 refseq) Desmodus rotundus GCF_022682495.1_HLdesRot8A 573 2,113,489,943 611 255,063 32.58
130 common wall lizard (hap1 2024) Podarcis muralis GCA_964188315.1_rPodMur119.hap1.1 185 1,522,641,370 827 165,400 38.70
131 common whitefish (fCorLav1.hap1.1 2024) Coregonus lavaretus GCA_964263955.1_fCorLav1.hap1.1 11,150 2,842,862,595 5,995 1,199,000 61.61
132 common yellowthroat Geothlypis trichas GCA_009764595.1_bGeoTri1.pri 278 1,078,128,490 1,479 13,697,790 20.48
133 convict blenny (chichlid 2021) Pholidichthys leucotaenia GCA_020510985.1_fPhoLeu1.pri 512 6,032,307,556 2,580 52,780,824 48.95
134 copperband butterflyfish Chelmon rostratus GCF_017976325.1_fCheRos1.pri 29 644,208,431 60 11,380 21.59
135 corkwing wrasse (primary hap 2022) Symphodus melops GCA_947650265.1_fSymMel2.1 395 636,368,453 1,379 275,800 28.78
136 corroboree frog (hap2 2023 refseq) Pseudophryne corroboree GCF_028390025.1_aPseCor3.hap2 3,127 8,872,758,793 2,699 21,212,457 74.73
137 corroboree frog (hap2 2023) Pseudophryne corroboree GCA_028390025.1_aPseCor3.hap2 3,127 8,872,758,793 2,699 21,212,457 75.08
138 Cory's shearwater (bCalBor7.hap1.1 2024) Calonectris borealis GCA_964195595.1_bCalBor7.hap1.1 355 1,366,205,003 525 105,015 24.91
139 Cretan wall lizard (primary hap 2023) Podarcis cretensis GCA_951804945.1_rPodCre2.1 51 1,507,627,055 47 9,400 38.66
140 crucian carp (primary hap 2023) Carassius carassius GCF_963082965.1_fCarCar2.1 277 1,684,296,438 832 166,400 45.86
141 cuckoo roller (hap2 2023) Leptosomus discolor GCA_034619465.1_bLepDis1.hap2 278 1,332,047,658 271 54,200 25.12
142 cuckoo wrasse (primary hap 2023) Labrus mixtus GCF_963584025.1_fLabMix1.1 324 740,563,171 570 114,014 33.86
143 cunner (2021) Tautogolabrus adspersus GCA_020745685.1_fTauAds1.pri.cur 64 723,582,185 283 4,256,220 30.38
144 Dalmatian pelican (primary hap 2023) Pelecanus crispus GCA_030463565.1_bPelCri1.pri 311 1,314,587,946 390 78,000 24.65
145 dark-edged splitfin (DD_20200921_A 2022) Girardinichthys multiradiatus GCF_021462225.1_DD_fGirMul_XY1 72 1,150,004,004 409 6,172,100 38.37
146 Daubenton's bat (primary hap 2023) Myotis daubentonii GCF_963259705.1_mMyoDau2.1 121 2,127,807,131 1,099 219,800 38.85
147 denticle herring (v2 2020) Denticeps clupeoides GCA_900700375.2_fDenClu1.2 461 567,417,970 464 4,648,387 28.83
148 diamondback terrapin (rMalTer1 2023) Malaclemys terrapin pileata GCF_027887155.1_rMalTer1.hap1 76 2,211,221,380 141 1,749,567 46.30
149 dog (German shepard Mischka 2020) Canis lupus familiaris GCF_011100685.1_UU_Cfam_GSD_1.0 2,197 2,481,983,352 585 58,500 43.95
150 Domestic goose (bAnsAns1.hap1.1 2024) Anser anser GCA_964211835.1_bAnsAns1.hap1.1 819 1,313,455,045 930 186,000 28.50
151 dorado (hap2 2023) Salminus brasiliensis GCA_030463535.1_fSalBra1.hap2 104 1,066,501,646 726 9,072,217 36.78
152 downy woodpecker (bDryPub1 primary hap 2020) Dryobates pubescens GCF_014839835.1_bDryPub1.pri 180 1,187,939,694 187 4,003,130 32.06
153 dugong (hap1 mDugDug1 2023) Dugong dugon GCA_030035585.1_mDugDug1.hap1 198 3,158,488,110 96 19,200 47.43
154 East African grey crowned-crane Balearica regulorum gibbericeps GCA_011004875.1_bBalReg1.pri 105 1,221,051,782 144 4,796,037 21.20
155 Eastern black-eared wheatear (GR-GAL-2019-014 2023) Oenanthe melanoleuca GCF_029582105.1_OMel1.0 587 1,036,256,795 582 58,200 20.82
156 eastern cottontail (primary hap 2023) Sylvilagus floridanus GCA_949820135.1_mSylFlo1.10 99 2,848,420,111 316 31,600 44.09
157 eastern happy (v3 2021) Astatotilapia calliptera GCA_900246225.5_fAstCal1.3 249 880,445,568 490 1,186,663 35.92
158 eastern musk turtle (primary hap 2023) Sternotherus odoratus GCA_032164245.1_rSteOdo2_p1.0 218 1,759,411,633 553 110,600 30.45
159 eastern narrow-mouthed toad (primary haplotype 2023) Gastrophryne carolinensis GCA_027917425.1_aGasCar1.pri 1,002 4,336,248,441 1,745 349,000 60.57
160 Egyptian rousette (2020) Rousettus aegyptiacus GCF_014176215.1_mRouAeg1.p 29 1,893,602,072 242 26,674,495 32.62
161 electric eel Electrophorus electricus GCF_013358815.1_fEleEle1.pri 89 589,358,956 227 10,599,768 24.89
162 emu (hap1 2024) Dromaius novaehollandiae GCF_036370855.1_bDroNov1.hap1 271 1,468,706,110 129 25,800 24.07
163 emu (v2 ZJU1.0 2023) Dromaius novaehollandiae GCA_016128335.2_ZJU2.0 767 1,247,435,561 539 72,443 19.18
164 epaulette shark (sHemOce1 2021 refseq) Hemiscyllium ocellatum GCF_020745735.1_sHemOce1.pat.X.cur. 1,962 3,983,466,396 3,716 77,564,682 62.70
165 ermine (2020) Mustela erminea GCF_009829155.1_mMusErm1.Pri 94 2,445,217,270 199 21,483,976 41.13
166 Eurasian badger (v3.1 2021) Meles meles GCF_922984935.1_mMelMel3.1_paternal_haplotype 538 2,738,694,446 101 23,800 38.09
167 Eurasian collared-dove (bStrDea1.hap1.1 2024) Streptopelia decaocto GCA_964273445.1_bStrDea1.hap1.1 2,451 1,290,957,608 696 139,200 30.01
168 Eurasian crane (hap1 2024) Grus grus GCA_964106855.1_bGruGru1.hap1.1 754 1,352,282,554 593 118,600 26.80
169 Eurasian curlew (hap1 2024) Numenius arquata GCA_964106895.1_bNumArq3.hap1.1 1,819 1,348,876,333 785 157,000 28.37
170 Eurasian minnow (primary hap 2023) Phoxinus phoxinus GCA_949152265.1_fPhoPho1.1 125 950,498,056 881 176,200 44.44
171 Eurasian nightjar Caprimulgus europaeus GCA_907165065.1_bCapEur3.1 121 1,177,791,212 153 25,835 22.20
172 Eurasian red squirrel (v1.2 2020) Sciurus vulgaris GCA_902686455.2_mSciVul1.2 639 2,878,607,543 1,177 163,358,994 33.75
173 Eurasian river otter (2020) Lutra lutra GCF_902655055.1_mLutLut1.2 44 2,438,458,878 185 90,271 34.39
174 Eurasian water vole (v2 2021) Arvicola amphibius GCF_903992535.2_mArvAmp1.2 215 2,297,766,297 873 6,026,960 32.43
175 European chub (primary hap 2023) Squalius cephalus GCA_949319135.1_fSquCep2.1 106 1,101,930,522 588 117,600 49.02
176 European common frog Rana temporaria GCF_905171775.1_aRanTem1.1 554 4,111,422,596 1,860 26,194,034 55.46
177 European conger Conger conger GCF_963514075.1_fConCon1.1 380 1,136,402,888 1,009 201,800 35.55
178 European eel Anguilla anguilla GCF_013347855.1_fAngAng1.pri 54 979,045,926 640 3,868,499 27.45
179 European flounder (primary hap 2023) Platichthys flesus GCA_949316205.1_fPlaFle2.1 109 597,138,466 482 96,400 27.15
180 European flounder (primary hap 2023) Platichthys flesus GCF_949316205.1_fPlaFle2.1 108 597,120,941 482 96,400 27.16
181 European golden plover Pluvialis apricaria GCA_017639485.1_bPluApr1.pri 107 1,247,767,512 268 12,294,737 21.20
182 European harvest mouse (primary hap 2024) Micromys minutus GCA_963924665.1_mMicMin1.1 894 2,651,787,409 2,020 404,000 42.52
183 European mink (mMusLut2 primary hap 2023) Mustela lutreola GCF_030435805.1_mMusLut2.pri 25 2,586,268,927 39 7,800 36.60
184 European mole (hap1 2024) Talpa europaea GCA_964194135.1_mTalEur1.hap1.1 464 2,061,000,977 1,056 211,200 33.70
185 European pine marten (primary hap 2023) Martes martes GCA_963455335.1_mMarMar1.1 477 2,484,650,161 2,250 450,000 34.75
186 European plaice (primary hap 2022) Pleuronectes platessa GCF_947347685.1_fPlePla1.1 355 687,388,084 1,072 214,400 33.59
187 European pond turtle (hap1 2023 refseq) Emys orbicularis GCF_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
188 European pond turtle (hap1 rEmyOrb1 2023) Emys orbicularis GCA_028017835.1_rEmyOrb1.hap1 106 2,309,740,635 148 3,324,230 35.43
189 European river lamprey (primary hap 2024) Lampetra fluviatilis GCA_964198595.1_kcLamFluv1.1 1,497 1,042,475,189 1,795 359,000 50.86
190 European robin Erithacus rubecula GCA_903797595.2_bEriRub2.2 1,119 1,086,738,418 990 287,644 21.47
191 European shag (primary hap 2023) Phalacrocorax aristotelis GCA_949628215.1_bGulAri2.1 353 1,279,134,750 222 44,217 22.81
192 European shrew (mSorAra2 primary hap 2023) Sorex araneus GCF_027595985.1_mSorAra2.pri 65 2,405,993,548 1,427 12,943,964 41.75
193 European smelt (primary hap 2023) Osmerus eperlanus GCA_963692335.1_fOsmEpe2.1 1,008 508,737,883 2,462 492,400 35.91
194 European smelt (primary hap 2023) Osmerus eperlanus GCF_963692335.1_fOsmEpe2.1 1,007 508,721,272 2,462 492,400 35.92
195 European snow vole (primary hap 2023) Chionomys nivalis GCF_950005125.1_mChiNiv1.1 160 2,393,390,621 197 39,400 44.15
196 European sprat (primary hap 2023) Sprattus sprattus GCA_963457725.1_fSprSpr1.1 387 840,332,306 1,501 300,226 35.52
197 European starfish Asterias rubens GCF_902459465.1_eAstRub1.3 150 417,601,740 471 148,140 37.45
198 European suslik (primary hap 2024) Spermophilus citellus GCA_964194105.1_mSpeCit3.1 498 3,090,049,053 1,436 287,200 41.68
199 European turtle dove (v1.2 2021) Streptopelia turtur GCA_901699155.2_bStrTur1.2 311 1,178,816,852 940 3,880,574 21.07
200 European woodmouse (2022 refseq) Apodemus sylvaticus GCF_947179515.1_mApoSyl1.1 497 2,889,785,202 1,129 225,617 40.60
201 false killer whale (hap1 2024) Pseudorca crassidens GCA_039906515.1_mPseCra1.hap1 439 2,674,608,476 123 2,797,992 41.86
202 false killer whale (mPseCra1hap1 2024) Pseudorca crassidens GCF_039906515.1_mPseCra1.hap1 438 2,674,592,094 123 2,797,992 41.86
203 Filfola wall lizard (rPodFil1.hap1.1 2024) Podarcis filfolensis GCA_964270895.1_rPodFil1.hap1.1 349 1,506,966,124 872 174,400 37.95
204 fire-bellied toad (aBomBom1 primary hap 2023) Bombina bombina GCF_027579735.1_aBomBom1.pri 2,467 10,019,663,791 7,009 198,898,177 69.42
205 Fleay's barred frog (hap1 2024) Mixophyes fleayi GCA_038048845.1_aMixFle1.hap1 2,806 2,969,628,263 1,421 3,802,133 46.39
206 flier cichlid Archocentrus centrarchus GCF_007364275.1_fArcCen1 188 932,930,362 744 16,903,477 30.69
207 Florida worm lizard (hap2 2023) Rhineura floridana GCF_030035675.1_rRhiFlo1.hap2 76 2,307,419,594 242 6,466,284 45.32
208 Florida worm lizard (hap2 rRhiFlo1 2023) Rhineura floridana GCA_030035675.1_rRhiFlo1.hap2 77 2,307,436,586 242 6,466,284 45.32
209 freshwater garfish (fXenCan1 2020) Xenentodon cancila GCA_014839995.1_fXenCan1.pri 410 736,214,936 1,373 7,503,584 27.54
210 Gabon caecilian Geotrypetes seraphini GCF_902459505.1_aGeoSer1.1 164 3,779,430,019 433 5,502,713 52.86
211 Gaboon caecilian (v1.2 2021 genbank) Geotrypetes seraphini GCA_902459505.2_aGeoSer1.2 164 3,779,430,017 433 5,502,713 52.86
212 garden warbler Sylvia borin GCA_014839755.1_bSylBor1.pri 176 1,045,652,180 134 1,835,448 20.28
213 gharial (hap2 2023) Gavialis gangeticus GCA_030020295.1_rGavGan2.hap2 160 2,328,538,659 118 1,108,111 32.92
214 giant manta (hap1 2023) Mobula birostris GCA_030028105.1_sMobBir1.hap1 4,715 4,014,635,230 1,810 30,852,630 54.43
215 gilthead seabream (v2 2021) Sparus aurata GCA_900880675.2_fSpaAur1.2 176 833,595,063 1,050 342,268 29.60
216 golden eagle (2021) Aquila chrysaetos chrysaetos GCF_900496995.4_bAquChr1.4 144 1,233,704,830 228 5,201,260 20.02
217 golden spiny mouse (2020) Acomys russatus GCF_903995435.1_mAcoRus1.1 623 2,301,522,284 880 7,954,169 32.57
218 Goodes thornscrub tortoise Gopherus evgoodei GCF_007399415.2_rGopEvg1_v1.p 383 2,298,564,209 562 29,560,319 33.37
219 Grand Cayman blue iguana (hap1 2023) Cyclura pinguis GCA_030412105.1_rCycPin1.hap1 30 1,983,631,412 28 1,082,164 32.57
220 gray short-tailed opossum (mMonDom1 primary hap 2023 refseq) Monodelphis domestica GCF_027887165.1_mMonDom1.pri 13 3,586,166,573 2,255 31,907,317 43.38
221 gray squirrel (2020) Sciurus carolinensis GCF_902686445.1_mSciCar1.2 752 2,815,397,268 1,824 604,531 34.56
222 gray wolf (2021) Canis lupus GCA_905319855.2_mCanLor1.2 82 2,447,463,909 166 45,800 34.76
223 great cormorant (primary hap 2024) Phalacrocorax carbo GCA_963921805.1_bPhaCar2.1 351 1,283,643,005 493 98,600 22.67
224 great cormorant (primary hap 2024) Phalacrocorax carbo GCF_963921805.1_bPhaCar2.1 350 1,283,623,959 493 98,600 22.67
225 great fruit-eating bat (mArtLit1 hap1 2024) Artibeus lituratus GCA_038363095.1_mArtLit.hap1 419 2,293,600,955 81 12,100 34.66
226 great fruit-eating bat (v2 hap1 2024) Artibeus lituratus GCA_038363095.2_mArtLit.hap1 487 2,311,617,438 45 7,300 35.13
227 great potoo Nyctibius grandis GCA_013368605.1_bNycGra1.pri 191 1,256,414,880 243 6,139,133 23.97
228 great scallop Pecten maximus GCF_902652985.1_xPecMax1.1 3,983 918,306,378 1,827 691,874 32.72
229 great white shark Carcharodon carcharias GCF_017639515.1_sCarCar2.pri 719 4,286,311,191 2,645 19,150,268 52.46
230 greater argentine (primary hap 2023) Argentina silus GCA_951799395.1_fArgSil1.1 1,024 670,765,936 1,752 350,400 39.30
231 greater horseshoe bat (mRhiFer1 2020) Rhinolophus ferrumequinum GCA_014108255.1_mRhiFer1.p 50 2,072,561,339 292 16,878,831 34.75
232 greater horseshoe bat (v2 MPI-CBG 2019) Rhinolophus ferrumequinum GCF_004115265.2_mRhiFer1_v1.p 134 2,075,768,562 158 7,546,098 34.43
233 greater mouse-eared bat (2020 Bat1K) Myotis myotis GCF_014108235.1_mMyoMyo1.p 93 2,002,797,769 538 28,953,405 35.85
234 greater pipefish Syngnathus acus GCF_901709675.1_fSynAcu1.2 87 324,331,233 43 13,700 25.95
235 greater sac-winged bat (mSacBil1 primary hap 2024) Saccopteryx bilineata GCA_036850765.1_mSacBil1_pri_phased_curated 257 2,612,326,447 468 33,092,045 43.30
236 greater sac-winged bat (primary hap 2024 refseq) Saccopteryx bilineata GCF_036850765.1_mSacBil1_pri_phased_curated 256 2,612,309,609 468 33,092,045 43.31
237 greater sand-eel (primary hap 2023) Hyperoplus immaculatus GCA_949357725.1_fHypImm3.1 1,568 797,804,280 1,188 237,600 40.07
238 green sea turtle (v2 2021) Chelonia mydas GCF_015237465.2_rCheMyd1.pri.v2 93 2,134,375,114 298 11,960,176 31.96
239 grey gurnard (primary hap 2023) Eutrigla gurnardus GCA_963514095.1_fEutGur1.1 319 680,483,561 553 110,600 35.71
240 grey whale (mEscRob2 primary hap 2023) Eschrichtius robustus GCA_028021215.1_mEscRob2.pri 704 2,982,434,994 279 55,800 46.40
241 grey whale (mEscRob2 primary hap 2023) Eschrichtius robustus GCF_028021215.1_mEscRob2.pri 703 2,982,418,581 279 55,800 46.40
242 gudgeon (primary hap 2023) Gobio gobio GCA_949357685.1_fGobGob1.1 231 1,460,679,231 1,046 209,200 68.84
243 gyrfalcon Falco rusticolus GCF_015220075.1_bFalRus1.pri 133 1,195,847,496 635 5,345,814 18.84
244 harbor porpoise (primary hap 2024 refseq) Phocoena phocoena GCF_963924675.1_mPhoPho1.1 439 2,512,713,112 966 193,200 39.05
245 harbor porpoise (primary hap 2024) Phocoena phocoena GCA_963924675.1_mPhoPho1.1 440 2,512,729,496 966 193,200 39.05
246 Harpy eagle (bHarHar1 2022) Harpia harpyja GCF_026419915.1_bHarHar1_primary_haplotype 322 1,351,447,071 342 2,651,394 24.82
247 Hawaiian crow (2021 refseq) Corvus hawaiiensis GCF_020740725.1_bCorHaw1.pri.cur 188 1,151,611,379 294 1,813,227 23.63
248 hazel dormouse (primary hap 2023) Muscardinus avellanarius GCA_963383645.1_mMusAve1.1 213 2,497,520,702 1,805 361,000 43.99
249 hemichordates Saccoglossus (HW-2024a hap1 2024) Saccoglossus sp. HW-2024a GCA_040954625.1_ASM4095462v1 77 328,607,491 254 127,000 29.41
250 hippopotamus (mHipAmp2 2023) Hippopotamus amphibius kiboko GCF_030028045.1_mHipAmp2.hap2 357 2,538,259,262 226 45,200 35.48
251 hoatzin (hap1 2023) Opisthocomus hoazin GCA_030867145.1_bOpiHoa1.hap1 415 1,482,459,898 268 53,600 31.68
252 honeycomb rockfish Sebastes umbrosus GCF_015220745.1_fSebUmb1.pri 138 800,904,020 215 1,393,892 36.28
253 horn shark (hap2 2024) Heterodontus francisci GCA_036365495.1_sHetFra1.hap2 1,496 5,196,885,747 2,790 29,620,202 62.99
254 horn shark (sHetFra1hap1 2024) Heterodontus francisci GCF_036365525.1_sHetFra1.hap1 2,306 6,013,048,672 2,781 28,369,521 6.74
255 horse (mEquCab1 2024) Equus caballus GCA_036426135.1_mEquCab1.pat 602 2,596,737,506 114 22,800 35.42
256 hourglass treefrog (paternal 2023) Dendropsophus ebraccatus GCA_027789765.1_aDenEbr1.pat 2,200 2,214,937,069 804 6,692,944 51.44
257 house finch (bHaeMex1 primary hap 2022 refseq) Haemorhous mexicanus GCF_027477595.1_bHaeMex1.pri 184 1,148,233,018 296 11,207,146 23.53
258 house finch (bHaeMex1 primary hap 2022) Haemorhous mexicanus GCA_027477595.1_bHaeMex1.pri 183 1,148,216,196 295 11,207,145 23.53
259 house mouse (primary hap 2023) Mus musculus GCA_949316315.1_mMusMuc1.1 179 2,770,968,735 101 20,200 45.38
260 house sparrow (hap1 2024) Passer domesticus GCA_036417665.1_bPasDom1.hap1 334 1,310,114,252 202 40,400 30.41
261 house sparrow (hap1 2024) Passer domesticus GCF_036417665.1_bPasDom1.hap1 335 1,310,131,054 204 40,402 30.41
262 Humboldt's penguin (bSphHub1 primary hap 2022) Spheniscus humboldti GCA_027474245.1_bSphHub1.pri 136 1,358,357,718 253 1,055,061 25.75
263 humpback whale (KW2013002 2024) Megaptera novaeangliae GCA_041834305.1_ASM4183430v1 1,355 3,146,604,256 88 8,800 48.29
264 hybrid cattle (Angus x Brahman F1 Brahman haplotype 2018) Bos indicus x Bos taurus GCF_003369695.1_UOA_Brahman_1 1,250 2,680,953,056 302 1,636,497 47.57
265 Iberian parsley frog (aPelIbe1 2024) Pelodytes ibericus GCA_036172795.1_aPelIbe1.pri 99 2,077,659,799 262 52,400 49.33
266 Iberian ribbed newt (20211129_DDA 2022) Pleurodeles waltl GCA_026652325.1_ASM2665232v1 267 20,300,798,037 922 333,042 71.01
267 Indian glassy fish (v2 2020) Parambassis ranga GCA_900634625.2_fParRan2.2 157 551,029,983 1,523 10,561,548 25.10
268 Indo-Pacific tarpon Megalops cyprinoides GCF_013368585.1_fMegCyp1.pri 207 959,258,046 63 283,098 22.11
269 intermediate roundleaf bat (primary hap 2023) Hipposideros larvatus GCA_031876335.1_mHipLar1.pri 69 2,338,923,724 119 33,404 35.41
270 Italian wall lizard (rPodSic1.hap1.1 2024) Podarcis siculus GCA_964188175.1_rPodSic1.hap1.1 294 1,571,381,643 762 152,400 40.39
271 jewelled blenny Salarias fasciatus GCF_902148845.1_fSalaFa1.1 203 797,507,141 602 10,447,897 26.61
272 John dory (primary hap 2023) Zeus faber GCA_960531495.1_fZeuFab8.1 191 804,731,948 887 177,400 39.97
273 kagu (bRhyJub1 primary hap 2023) Rhynochetos jubatus GCA_027574665.1_bRhyJub1.pri 148 1,331,454,348 300 525,241 28.26
274 kakapo (Jane v2 2020 refseq) Strigops habroptila GCF_004027225.2_bStrHab1.2.pri 89 1,148,597,545 373 10,544,081 20.53
275 killer whale (2022) Orcinus orca GCF_937001465.1_mOrcOrc1.1 448 2,647,351,467 123 24,436 41.64
276 king vulture (hap1 2024) Sarcoramphus papa GCA_037962945.1_bSarPap1.hap1 124 1,543,950,730 154 30,800 32.53
277 koala (Bilbo 61053 2022) Phascolarctos cinereus GCA_003287225.2_phaCin_HiC 1,246 3,192,631,935 669 66,801 39.25
278 Korean giant-fin mudskipper (v1.2 primary hap 2023) Periophthalmus magnuspinnatus GCF_009829125.3_fPerMag1.2.pri 122 752,605,561 701 7,178,761 43.07
279 Kuhl's pipistrelle (2020) Pipistrellus kuhlii GCF_014108245.1_mPipKuh1.p 202 1,775,688,541 394 12,201,491 34.57
280 lammergeier (bGypBar2 primary hap 2023) Gypaetus barbatus GCA_028022735.1_bGypBar2.pri 232 1,365,299,843 259 2,000,432 26.52
281 lance-tailed manakin Chiroxiphia lanceolata GCF_009829145.1_bChiLan1.pri 93 1,089,631,598 206 3,303,511 20.07
282 lancelets B.floridae x B.belcheri (bbbf 2021) Branchiostoma floridae x Branchiostoma belcheri GCA_019207075.1_Bb-hap 79 405,532,174 108 492,029 28.95
283 lancelets B.floridae x B.japonicum (bjbf 2020) Branchiostoma floridae x Branchiostoma japonicum GCA_015852565.1_bf_hap-2 341 490,782,628 168 84,000 27.78
284 lanner falcon (bFalBia1 primary hap 2022 refseq) Falco biarmicus GCF_023638135.1_bFalBia1.pri 397 1,285,492,283 158 2,152,808 23.59
285 lantern fish (primary hap 2024) Nannobrachium achirus GCA_963921795.1_fNanAch1.1 673 1,658,848,640 2,397 479,400 54.08
286 large tree shrew (BS70 2022) Tupaia tana GCA_026018925.1_mTupTan1 1,198 2,948,294,157 1,188 115,755 46.11
287 large-eye snaggletooth (primary hap 2023) Borostomias antarcticus GCA_949987555.1_fBorAnt1.1 1,378 909,249,001 2,631 526,200 46.88
288 largemouth bass (2-A1 2021) Micropterus salmoides GCA_019677235.1_HNU_Msal_1.0 202 877,669,248 672 335,002 29.68
289 largescale foureyes (2020) Anableps anableps GCA_014839685.1_fAnaAna1.pri 33 867,632,993 107 306,559 29.88
290 Lataste's viper (rVipLat1 2022) Vipera latastei GCA_024294585.1_rVipLat1.pri 56 1,631,568,913 769 3,547,667 44.82
291 leatherback sea turtle (v4 2021 refseq G10K) Dermochelys coriacea GCF_009764565.3_rDerCor1.pri.v4 40 2,164,762,090 668 5,594,612 34.21
292 lemon sole (primary hap 2024) Microstomus kitt GCA_964266715.1_fMicKit1.1 1,581 752,333,918 409 81,800 39.40
293 lesser black-backed gull (primary hap 2024) Larus fuscus GCA_963932225.1_bLarFus1.1 1,367 1,324,286,540 537 107,415 27.18
294 lesser Egyptian jerboa (2021) Jaculus jaculus GCF_020740685.1_mJacJac1.mat.Y.cur 160 2,863,865,261 561 13,702,780 44.14
295 lesser horseshoe bat (hap1 2024) Rhinolophus hipposideros GCA_964194185.1_mRhiHip2.hap1.1 723 2,171,328,640 1,627 325,400 33.62
296 lesser kestrel (v2 2021) Falco naumanni GCF_017639655.2_bFalNau1.pat 291 1,215,719,661 298 4,077,287 19.20
297 lesser noctule (mNycLei1.hap1.1 2024) Nyctalus leisleri GCA_964264875.1_mNycLei1.hap1.1 1,281 2,233,532,335 1,662 332,400 42.92
298 lesser rhea (bPtePen1 primary hap 2023 refseq) Rhea pennata GCF_028389875.1_bPtePen1.pri 180 1,269,016,774 128 1,451,673 22.80
299 lesser sac-winged bat (mSacLep1 primary hap 2024) Saccopteryx leptura GCA_036850995.1_mSacLep1_pri_phased_curated 167 2,576,497,192 573 19,614,433 42.31
300 lesser sac-winged bat (primary hap 2024 refseq) Saccopteryx leptura GCF_036850995.1_mSacLep1_pri_phased_curated 168 2,576,513,769 573 19,614,433 42.31
301 lesser salmon catfish (fNeoGra1 primary hap 2023 refseq) Neoarius graeffei GCF_027579695.1_fNeoGra1.pri 38 2,341,916,362 334 13,260,140 71.56
302 lesser salmon catfish (fNeoGra1 primary hap 2023) Neoarius graeffei GCA_027579695.1_fNeoGra1.pri 38 2,341,916,362 334 13,260,140 62.77
303 lesser sand-eel (primary hap 2023) Ammodytes marinus GCA_949987685.1_fAmmMar1.1 617 777,835,610 1,017 203,400 39.22
304 lesser weever (primary hap 2023) Echiichthys vipera GCA_963691815.1_fEchVip8.1 133 800,398,249 606 121,200 33.26
305 light-bulb sea squirt (2022) Clavelina lepadiformis GCA_947623445.1_kaClaLepa1.1 103 210,089,204 58 11,600 33.50
306 limp eelpout (primary hap 2023) Melanostigma gelatinosum GCA_949748355.1_fMelGel1.1 534 661,975,483 589 119,200 33.26
307 live sharksucker (v2 2021) Echeneis naucrates GCA_900963305.2_fEcheNa1.2 38 544,229,243 140 599,356 21.82
308 lizards B.pumilum (Western Cape Province JTBG20231 2024) Bradypodion pumilum GCA_035047305.1_BraPum1.0 21 2,486,266,449 18 1,777 56.83
309 lizards F.pardalis (Fpa_1 2023) Furcifer pardalis GCA_030440675.1_ASM3044067v1 11 1,609,777,135 12 11,023 42.07
310 lizards P.bocagei (rPodBoc1.hap1.1 2024) Podarcis bocagei GCA_964188305.1_rPodBoc1.hap1.1 507 1,615,206,822 1,005 201,015 41.41
311 lizards P.erhardii (rPodErh1.hap1.1 2024) Podarcis erhardii GCA_964252035.1_rPodErh1.hap1.1 326 1,495,994,634 836 167,200 38.58
312 lizards P.melisellensis (rPodMel1.hap1.1 2024) Podarcis melisellensis GCA_964234715.1_rPodMel1.hap1.1 386 1,574,923,724 823 164,600 40.21
313 lizards P.pityusensis (rPodPit1.hap1.2 2024) Podarcis pityusensis GCA_964106645.2_rPodPit1.hap1.2 336 1,515,373,509 1,506 301,200 38.22
314 long-finned pilot whale (primary hap 2023) Globicephala melas GCF_963455315.1_mGloMel1.1 993 2,651,292,441 1,084 216,617 42.02
315 long-finned pilot whale (primary hap 2024) Globicephala melas GCA_963455315.2_mGloMel1.2 993 2,651,292,441 1,084 216,617 42.02
316 long-tailed duck (primary hap 2024) Clangula hyemalis GCA_963989345.1_bClaHye2.1 272 1,206,104,048 544 108,625 26.17
317 long-tailed hermit (PSU5 primary hap 2022) Phaethornis superciliosus GCA_023637945.1_DD_ASM_B1 70 1,020,112,811 141 3,809,484 20.12
318 longspined bullhead (2021) Taurulus bubalis GCA_910589615.1_fTauBub2.1 27 615,153,901 242 77,100 28.62
319 lumpfish (refseq) Cyclopterus lumpus GCF_009769545.1_fCycLum1.pri 48 572,885,595 347 10,182,204 28.09
320 Macqueen's bustard (bChlMac1 2024) Chlamydotis macqueenii GCA_036417535.1_bChlMac1.mat 329 1,273,933,319 100 20,000 27.09
321 maguari stork (2021) Ciconia maguari GCA_017639555.1_bCicMag1.pri 153 1,239,437,416 232 22,209,791 19.58
322 mallard (hap1 2024) Anas platyrhynchos GCA_964188345.1_bAnaPla2.hap1.1 936 1,300,248,985 571 114,200 28.71
323 mallard (Pekin duck Z2 2020 Zhejiang U) Anas platyrhynchos GCF_015476345.1_ZJU1.0 756 1,188,533,289 905 4,230,438 24.63
324 marbled rockcod (primary hap 2023) Notothenia rossii GCA_949606895.1_fNotRos5.1 943 1,042,906,029 4,157 831,400 44.98
325 Mauritius kestrel (primary hap 2023) Falco punctatus GCA_963210335.1_bFalPun1.1 316 1,279,277,844 407 81,600 22.85
326 Mauritius parakeet (primary hap 2023) Psittacula echo GCA_963264785.1_bPsiEch3.1 172 1,203,831,919 358 71,432 25.22
327 meadow viper (2022) Vipera ursinii GCA_947247035.1_rVipUrs1.1 384 1,625,023,540 1,819 363,800 45.37
328 meadow vole (hap1 2024) Microtus pennsylvanicus GCA_037038515.1_mMicPen1.hap1 181 2,369,135,991 60 11,000 41.94
329 Merriam's long-tongued bat (hap1 2024) Glossophaga mutica GCA_039655065.1_mGloMut1.hap1 82 2,159,908,085 47 8,300 32.97
330 Mexican burrowing toad (hap1 2024) Rhinophrynus dorsalis GCA_037306005.1_aRhiDor1.hap1 464 4,745,569,335 2,032 406,419 53.56
331 Mexican gopher tortoise (WGS:JAMKFC01 2022) Gopherus flavomarginatus GCF_025201925.1_rGopFla2.mat.asm 621 2,460,542,086 1,866 89,638,462 34.69
332 milkfish Chanos chanos GCF_902362185.1_fChaCha1.1 31 656,929,047 112 4,230,332 26.35
333 mimic poison frog (primary hap 2023) Ranitomeya imitator GCA_032444005.1_aRanImi1.pri 1,673 5,956,630,009 765 80,159 2.40
334 minispotted lanternfish (primary hap 2023) Gymnoscopelus microlampas GCA_963454915.1_fGymMic1.1 374 1,318,656,016 1,398 279,600 47.09
335 minke whale (primary hap 2023) Balaenoptera acutorostrata GCF_949987535.1_mBalAcu1.1 1,374 2,772,885,358 1,177 235,400 42.67
336 monito del monte (mDroGli1 primary hap 2021) Dromiciops gliroides GCF_019393635.1_mDroGli1.pri 17 3,303,199,800 260 2,929,889 42.81
337 mute swan (v2 2021) Cygnus olor GCF_009769625.2_bCygOlo1.pri.v2 171 1,134,186,642 451 9,922,725 21.32
338 narwhal (Baffin Bay Population NGI 2022) Monodon monoceros GCA_005190385.3_NGI_Narwhal_2 101 2,341,954,608 313 31,300 37.30
339 Natterer's bat (mMyoNat1.hap1.1 2024) Myotis nattereri GCA_964212035.1_mMyoNat1.hap1.1 343 2,124,021,592 1,620 324,000 38.31
340 Nelson's sparrow (bAmmNel1 primary hap 2023 refseq) Ammospiza nelsoni GCF_027579445.1_bAmmNel1.pri 77 1,185,463,352 215 5,092,979 25.88
341 New Caledonian crow Corvus moneduloides GCF_009650955.1_bCorMon1.pri 105 1,112,734,094 289 28,870,195 19.58
342 New Zealand spotty (refseq) Notolabrus celidotus GCF_009762535.1_fNotCel1.pri 467 846,744,125 1,135 14,268,481 33.39
343 Nicobar pigeon (hap1 2024 refseq) Caloenas nicobarica GCF_036013445.1_bCalNic1.hap1 806 1,285,834,579 117 20,400 28.09
344 Nile rat (mArvNil1 2024) Arvicanthis niloticus GCA_011762505.2_mArvNil1.pat.X 1,596 2,496,777,707 1,624 20,289,527 42.62
345 nine-banded armadillo (mDasNov1 2023) Dasypus novemcinctus GCF_030445035.1_mDasNov1.hap2 539 3,570,966,115 771 11,475,092 43.66
346 ninespine stickleback (primary hap 2023) Pungitius pungitius GCA_949316345.1_fPunPun2.1 175 480,450,674 738 147,600 28.40
347 ninespine stickleback (primary hap 2023) Pungitius pungitius GCF_949316345.1_fPunPun2.1 174 480,434,100 738 147,600 28.40
348 North American deer mouse (MVZ:Mamm:240117 primary hap 2022) Peromyscus maniculatus sonoriensis GCA_026229955.1_mPerMan1.0.p 1,838 2,847,741,276 244 24,400 48.05
349 North American porcupine (mEreDor1 primary hap 2023) Erethizon dorsatum GCA_028451465.1_mEreDor1.pri 116 2,432,147,792 277 68,864 41.67
350 North Atlantic right whale (hap2 + XY 2023 refseq) Eubalaena glacialis GCF_028564815.1_mEubGla1.1.hap2._XY 789 2,843,691,573 367 4,958,084 43.93
351 North Island brown kiwi (bAptMan1hap1 2024) Apteryx mantelli GCF_036417845.1_bAptMan1.hap1 408 1,504,396,159 170 34,000 27.67
352 North Island brown kiwi (hap1 2024) Apteryx mantelli GCA_036417845.1_bAptMan1.hap1 409 1,504,415,252 170 34,000 27.67
353 northern bat (primary hap 2023) Eptesicus nilssonii GCA_951640355.1_mEptNil1.1 207 2,064,119,045 1,423 284,600 38.22
354 northern black mastiff bat (mMolNig1 2022) Molossus nigricans GCA_026936385.1_BBF_mMolNig1_v1 146 2,407,891,554 199 99,500 39.26
355 northern black mastiff bat (mMolNig1hap1 2024) Molossus nigricans GCA_039880945.1_mMolNig1.hap1 366 2,567,103,348 113 17,300 41.59
356 northern bottlenose whale (primary hap 2023) Hyperoodon ampullatus GCA_949752795.1_mHypAmp2.1 757 2,828,760,712 1,098 219,600 44.84
357 northern gannet (hap2 2023) Morus bassanus GCA_031468815.1_bMorBas2.hap2 421 1,294,804,326 248 49,600 21.09
358 northern goshawk (bAccGen1 primary hap v1 2022 refseq) Accipiter gentilis GCF_929443795.1_bAccGen1.1 454 1,398,011,397 183 36,600 27.31
359 northern goshawk (bAccGen1 v2 2022 genbank) Accipiter gentilis GCA_929443795.2_bAccGen1.2 455 1,398,030,142 183 36,600 27.31
360 northern pike Esox lucius GCF_011004845.1_fEsoLuc1.pri 53 918,748,614 112 1,022,735 32.97
361 northern pintail (primary hap 2024) Anas acuta GCA_963932015.1_bAnaAcu1.1 395 1,189,313,589 631 125,881 25.92
362 northern pintail (primary hap 2024) Anas acuta GCF_963932015.1_bAnaAcu1.1 394 1,189,296,988 631 125,881 25.92
363 Norway rat BN7.2 Rattus norvegicus GCF_015227675.2_mRatBN7.2 176 2,647,915,728 581 21,334,956 45.26
364 Obi paradise-crow (lycPyr6 2020) Lycocorax pyrrhopterus obiensis GCA_014706295.1_ASM1470629v1 1,695 1,107,771,238 1,602 5,759,488 20.21
365 olive python (hap1 2023) Liasis olivaceus GCA_030867105.1_rLiaOli1.hap1 43 1,486,119,866 73 297,716 30.16
366 one-colored caecilian (2021) Microcaecilia unicolor GCA_901765095.2_aMicUni1.2 1,081 4,685,939,421 2,452 47,437,278 52.44
367 orange-tipped seq squirt (primary hap 2023) Corella eumyota GCA_963082875.1_kaCorEumy4.1 105 129,324,498 244 48,800 51.10
368 orbiculate cardinalfish Sphaeramia orbicularis GCF_902148855.1_fSphaOr1.1 340 1,342,662,642 1,844 3,566,081 48.65
369 painted frog (primary hap 2022) Discoglossus pictus GCA_027410445.1_aDisPic1.pri 1,318 3,872,602,052 3,681 62,395,995 55.23
370 pale spear-nosed bat (MPI-MPIP v3 mPhyDis1 primary hap 2020) Phyllostomus discolor GCF_004126475.2_mPhyDis1.pri.v3 77 2,108,832,841 884 15,088,856 30.59
371 Pallas's mastiff bat Molossus molossus GCF_014108415.1_mMolMol1.p 60 2,315,568,481 349 47,372,874 37.10
372 pallid bat (TK200870 primary hap 2023) Antrozous pallidus GCA_027563665.1_DD_ASM_mAP_20210503 93 2,126,460,045 234 5,884,678 39.43
373 Papuan ground boa (hap2 2024) Candoia aspera GCA_035149785.1_rCanAsp1.hap2 150 1,530,827,941 101 20,200 33.56
374 parallel lanternfish (primary hap 2024) Protomyctophum parallelum GCA_964188405.1_fProPar1.1 24 1,235,328,005 2,729 545,800 48.26
375 particolored bat (primary hap 2024) Vespertilio murinus GCA_963924515.1_mVesMur1.1 178 1,925,577,803 980 196,000 37.48
376 pejerrey (fOdoBon6 haplotype 1 2023) Odontesthes bonariensis GCA_027942865.1_fOdoBon6.hap1 189 945,823,896 282 91,800 35.17
377 pejerrey (fOdoBon6 haplotype 2 2023) Odontesthes bonariensis GCA_027942885.1_fOdoBon6.hap2 334 974,945,057 135 67,500 36.86
378 peladilla (galaxoid fish 2021) Aplochiton taeniatus GCA_017639675.1_fAplTae1.pri 41 461,946,147 1,158 8,155,958 27.72
379 peregrine falcon (bFalPer1 primary hap 2022 refseq) Falco peregrinus GCF_023634155.1_bFalPer1.pri 125 1,311,598,859 241 4,014,394 24.67
380 Peter's clawed frog (aXenPet1 2024) Xenopus petersii GCA_038501925.1_aXenPet1.paternal.cur 888 2,883,796,191 500 100,000 45.47
381 Philippine flying lemur (mCynVol1 primary hap 2022 refseq) Cynocephalus volans GCF_027409185.1_mCynVol1.pri 130 2,814,418,120 116 32,500 39.52
382 Philippine flying lemur (mCynVol1 primary hap 2022) Cynocephalus volans GCA_027409185.1_mCynVol1.pri 131 2,814,434,834 116 32,500 39.52
383 pig (Bamei 2023) Sus scrofa GCA_030704935.1_ASM3070493v1 379 2,671,498,991 878 439,000 40.58
384 pig-tailed macaque (mMacNem1hap1 2024) Macaca nemestrina GCA_043159975.1_mMacNem.hap1 362 3,116,305,216 260 45,400 53.54
385 pinecone soldierfish Myripristis murdjan GCF_902150065.1_fMyrMur1.1 87 835,254,674 253 1,865,832 28.16
386 pink pigeon (primary hap 2023) Nesoenas mayeri GCA_963082525.1_bNesMay2.1 143 1,183,271,950 509 101,800 22.92
387 pink sea squirt (2022) Ascidia mentula GCA_947561715.1_kaAscMent1.1 96 196,975,169 32 6,400 26.22
388 pink-footed goose (primary hap 2024) Anser brachyrhynchus GCA_964034855.1_bAnsBra1.1 715 1,287,337,719 1,137 227,400 29.51
389 pitted-shelled turtle (YL-2023 2023) Carettochelys insculpta GCA_033958435.1_ASM3395843v1 134 2,180,317,067 12 2,400 47.95
390 plains spadefoot toad (aSpeBom1 primary hap 2022) Spea bombifrons GCF_027358695.1_aSpeBom1.2.pri 17 987,655,159 102 3,822,643 36.29
391 platypus (Pmale09 v4 2020) Ornithorhynchus anatinus GCF_004115215.2_mOrnAna1.pri.v4 322 1,859,281,927 515 15,158,118 50.98
392 plumbeous ibis (2021) Theristicus caerulescens GCA_020745775.1_bTheCae1.pri.cur 88 1,203,372,763 104 2,268,207 20.10
393 pollack (primary hap 2023) Pollachius pollachius GCA_949987615.1_fPolPol2.1 616 606,767,444 1,810 362,000 33.80
394 prehistoric monster fish Thalassophryne amazonica GCF_902500255.1_fThaAma1.1 464 2,446,592,878 2,554 12,594,266 59.92
395 proboscis bat (hap1 2024) Rhynchonycteris naso GCA_037038545.1_mRhyNas2.hap1 41 2,455,066,473 68 10,600 41.49
396 Puerto Rican coqui (hap1 2024) Eleutherodactylus coqui GCA_035609145.1_aEleCoq1.hap1 957 3,371,316,047 659 131,800 54.01
397 pygmy chimpanzee (v2 primary hap 2024 refseq) Pan paniscus GCF_029289425.2_NHGRI_mPanPan1-v2.0_pri 31 3,244,905,271 6 5,035,000 50.67
398 pygmy sperm whale (mKogBre1 haplotype 1 2022 refseq) Kogia breviceps GCF_026419965.1_mKogBre1_haplotype_1 581 2,555,855,246 143 4,797,769 39.97
399 rabbit (primary hap 2024) Oryctolagus cuniculus GCA_964237555.1_mOryCun1.1 222 2,804,674,863 2,276 455,200 41.73
400 rainbow smelt (fOsmMor3 primary hap 2024) Osmerus mordax GCA_038355195.1_fOsmMor3.pri 365 497,673,479 1,907 364,200 35.25
401 razorbill Alca torda GCA_008658365.1_bAlcTor1_primary 95 1,178,492,568 227 3,561,127 20.12
402 red deer (2021) Cervus elaphus GCF_910594005.1_mCerEla1.1 144 2,886,603,524 40 10,400 44.67
403 red fox (hap1 2024) Vulpes vulpes GCA_964106825.2_mVulVul1.hap1.2 461 2,411,727,275 1,845 369,000 33.01
404 red-bellied piranha Pygocentrus nattereri GCF_015220715.1_fPygNat1.pri 55 1,222,050,449 303 10,159,184 35.79
405 red-crested pochard (primary hap 2024) Netta rufina GCA_964035555.1_bNetRuf1.1 141 1,166,978,622 714 142,800 24.55
406 red-crested turaco Tauraco erythrolophus GCA_009769465.1_bTauEry1.pri 140 1,252,271,553 344 26,400,695 22.20
407 red-fronted tinkerbird (primary hap 2020 refseq) Pogoniulus pusillus GCF_015220805.1_bPogPus1.pri 252 1,272,338,968 307 6,012,757 35.91
408 red-legged seriema Cariama cristata GCA_009819825.1_bCarCri1.pri 110 1,215,245,693 194 4,933,338 19.73
409 red-throated loon (hap2 2023 refseq) Gavia stellata GCF_030936135.1_bGavSte3.hap2 1,185 1,321,270,170 249 49,800 23.65
410 red-winged blackbird (BioBank_ID:100140 2023) Agelaius phoeniceus GCF_020745825.1_Agelaius_phoeniceus_1.1 410 1,188,547,179 106 51,600 25.46
411 reedfish (2021) Erpetoichthys calabaricus GCF_900747795.2_fErpCal1.3 169 3,613,551,144 1,431 29,707,657 47.53
412 Reeves' muntjac (alternate hap 2024) Muntiacus reevesi GCA_963930665.1_mMunRee1.1_alternate_haplotype 8,892 2,863,788,737 0 0 48.30
413 Reeves' muntjac (primary hap 2024) Muntiacus reevesi GCF_963930625.1_mMunRee1.1 267 2,656,168,540 682 136,400 39.90
414 Rice's whale (hap2 2023 refseq) Balaenoptera ricei GCF_028023285.1_mBalRic1.hap2 774 2,678,442,663 334 2,621,494 41.09
415 rifleman (2021) Acanthisitta chloris GCA_016904835.1_bAcaChl1.pri 206 1,077,387,582 195 4,215,879 19.97
416 Riggenbach's reed frog (aHypRig1 primary hap 2024) Hyperolius riggenbachi GCF_040937935.1_aHypRig1.pri 477 4,915,935,452 3,039 606,696 60.27
417 ring-tailed lemur (2021) Lemur catta GCF_020740605.2_mLemCat1.pri 185 2,245,601,549 210 3,641,621 37.86
418 river trout (v2 2021) Salmo trutta GCA_901001165.2_fSalTru1.2 1,441 2,371,880,186 3,941 73,600,705 55.89
419 roach minnow (primary hap 2023) Rutilus rutilus GCA_951802725.1_fRutRut2.1 85 1,100,195,650 471 94,200 49.02
420 rock gunnel (2021) Pholis gunnellus GCA_910591455.2_fPhoGun1.2 101 588,696,950 418 137,000 25.63
421 rock pigeon (v2 racing homer 2024 refseq) Columba livia GCF_036013475.1_bColLiv1.pat.W.v2 869 1,325,566,026 249 46,900 29.94
422 rock ptarmigan (2022) Lagopus muta GCF_023343835.1_bLagMut1_primary 165 1,026,771,810 210 71,937 21.77
423 Rosablanca catfish (hap1 2023) Trichomycterus rosablanca GCA_030014385.1_fTriRos1.hap1 349 1,045,025,885 198 39,600 49.04
424 royal ground snake (hap1 2023) Erythrolamprus reginae GCA_031021105.1_rEryReg1.hap1 400 1,964,049,041 1,391 278,200 53.46
425 rudd (fScaEry2.hap1.1 2024) Scardinius erythrophthalmus GCA_964197995.1_fScaEry2.hap1.1 755 1,229,666,150 836 167,200 51.27
426 rufous frog (hap2 2023) Leptodactylus fuscus GCA_031893055.1_aLepFus1.hap2 1,266 2,197,996,823 976 20,381,759 59.61
427 saddleback dolphin (primary hap 2023 genbank) Delphinus delphis GCA_949987515.1_mDelDel1.1 631 2,663,533,373 968 193,431 42.65
428 saddleback dolphin (primary hap 2023 refseq) Delphinus delphis GCF_949987515.1_mDelDel1.1 630 2,663,516,986 968 193,431 42.65
429 Saker falcon (bFalChe1 primary hap 2022 refseq) Falco cherrug GCF_023634085.1_bFalChe1.pri 283 1,309,385,023 258 3,961,655 24.96
430 saltmarsh sparrow (bAmmCau1 primary hap 2023 refseq) Ammospiza caudacuta GCF_027887145.1_bAmmCau1.pri 282 1,241,209,685 363 2,919,107 29.04
431 San Diegan legless lizard (HBS135921 primary hap 2023) Anniella stebbinsi GCA_029215775.1_rAnnSte1.0.hap1 134 1,890,507,581 21 2,100 39.04
432 San Diegan tiger whiptail (HBS 135688 2022) Aspidoscelis tigris stejnegeri GCA_023333525.1_rAspTig1.0.p 74 1,335,668,279 39 3,900 36.99
433 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 refseq) Elgaria multicarinata webbii GCF_023053635.1_rElgMul1.1.pri 34 1,790,500,004 73 12,700 40.44
434 sand lizard Lacerta agilis GCF_009819535.1_rLacAgi1.pri 29 1,391,404,169 379 3,491,078 34.50
435 sardine (primary hap 2023) Sardina pilchardus GCA_963854185.1_fSarPil1.1 241 869,414,035 1,654 330,800 37.59
436 sardine (primary hap 2023) Sardina pilchardus GCF_963854185.1_fSarPil1.1 240 869,396,467 1,654 330,800 37.59
437 Sardinian treefrog (aHylSar1 2023) Hyla sarda GCF_029499605.1_aHylSar1.hap1 3,474 4,142,159,359 2,297 459,227 64.33
438 Savannah sparrow (primary hap 2023) Passerculus sandwichensis GCA_031885435.1_bPasSan2.pri 110 1,270,940,266 249 2,812,735 27.00
439 Schreibers' long-fingered bat (hap1 2024) Miniopterus schreibersii GCA_964146895.1_mMinSch1.hap1.1 265 1,852,127,854 1,322 264,400 31.12
440 sea lamprey Petromyzon marinus GCF_010993605.1_kPetMar1.pri 1,434 1,089,050,413 930 15,013,687 50.62
441 seaside sparrow (bAmmMar1 primary hap 2024) Ammospiza maritima maritima GCA_036010785.1_bAmmMar1.pri 501 1,397,856,043 365 2,055,583 34.58
442 shanny (primary hap 2023) Lipophrys pholis GCA_963383615.1_fLipPho2.1 847 768,243,328 598 119,616 29.07
443 sharpnose sevengill shark (hap1 2024) Heptranchias perlo GCA_035084215.1_sHepPer1.hap1 1,880 3,249,935,392 1,834 366,800 57.50
444 sharpnose sevengill shark (sHepPer1hap1 2024) Heptranchias perlo GCF_035084215.1_sHepPer1.hap1 1,879 3,249,915,908 1,834 366,800 57.50
445 siamang (v2 Jambi primary hap 2024 refseq) Symphalangus syndactylus GCF_028878055.2_NHGRI_mSymSyn1-v2.0_pri 27 3,262,904,224 2 1,000,001 55.90
446 siamang (v2.1 Jambi primary hap 2024 refseq) Symphalangus syndactylus GCF_028878055.3_NHGRI_mSymSyn1-v2.1_pri 27 3,262,904,224 2 1,000,001 55.90
447 Siamese fighting fish (v4 primary hap 2023) Betta splendens GCF_900634795.4_fBetSpl5.4 36 427,001,245 321 31,466 23.21
448 Skyros wall lizard (rPodGai1.hap1.1 2024) Podarcis gaigeae GCA_964106915.1_rPodGai1.hap1.1 211 1,514,643,635 883 176,600 38.22
449 Skyros wall lizard (rPodGai1.hap1.2 2024) Podarcis gaigeae GCA_964106915.2_rPodGai1.hap1.2 211 1,514,643,635 883 176,600 38.22
450 slow loris (mNycCou1 primary hap 2022) Nycticebus coucang GCF_027406575.1_mNycCou1.pri 84 2,917,154,053 218 4,119,506 40.79
451 smaller spotted catshark (v1.1 primary hap 2020 refseq) Scyliorhinus canicula GCF_902713615.1_sScyCan1.1 646 4,220,406,627 7,146 64,220,747 51.42
452 smaller spotted catshark (v1.2 primary hap 2021 genbank) Scyliorhinus canicula GCA_902713615.2_sScyCan1.2 645 4,220,389,930 7,146 64,220,747 51.42
453 smalleye Pacific opah (fLamInc1 2023) Lampris incognitus GCF_029633865.1_fLamInc1.hap2 544 1,482,357,630 3,115 622,730 53.30
454 smalltooth sawfish (v2.1 2019 refseq) Pristis pectinata GCF_009764475.1_sPriPec2.1.pri 172 2,267,840,987 698 20,562,876 54.48
455 snake C.aspera (hap2 2024) Candoia aspera GCF_035149785.1_rCanAsp1.hap2 149 1,530,810,380 101 20,200 33.56
456 snake N.helvetica (rNatHel1.hap1.1 2024) Natrix helvetica GCA_964273705.1_rNatHel1.hap1.1 487 1,777,516,490 2,010 402,000 46.17
457 song sparrow (bMelMel2 primary hap 2024) Melospiza melodia melodia GCF_035770615.1_bMelMel2.pri 353 1,541,245,192 299 1,079,098 39.28
458 song sparrow (primary hap 2024) Melospiza melodia melodia GCA_035770615.1_bMelMel2.pri 354 1,541,261,971 299 1,079,098 39.28
459 soprano pipistrelle (primary hap 2023) Pipistrellus pygmaeus GCA_949987585.1_mPipPyg2.1 243 1,895,125,685 161 32,017 37.73
460 South Island takahe (primary hap 2021) Porphyrio hochstetteri GCA_020800305.1_bPorHoc1.mat.Z.cur 174 1,270,294,353 327 5,316,249 25.92
461 southern bluefin tuna (2021) Thunnus maccoyii GCF_910596095.1_fThuMac1.1 58 782,423,979 184 31,592 26.89
462 Southern dwarf chameleon (Gauteng JTBG20232 2024) Bradypodion ventrale GCA_035047345.1_BraVen1.1 113 2,373,187,502 22 2,189 54.44
463 southern grasshopper mouse (2020) Onychomys torridus GCF_903995425.1_mOncTor1.1 2,949 2,468,394,440 2,143 26,162,626 32.74
464 southern tamandua (mTamTet1 primary hap 2022) Tamandua tetradactyla GCA_023851605.1_mTamTet1.pri 201 3,205,741,135 961 17,897,414 45.80
465 southern two-toed sloth (mChoDid1 primary hap 2020) Choloepus didactylus GCF_015220235.1_mChoDid1.pri 146 3,214,702,648 1,243 80,992,407 40.51
466 Sowerby's beaked whale (hap1 2024) Mesoplodon bidens GCA_964165515.1_mMesBid2.hap1.1 1,602 2,999,098,505 1,095 219,000 45.32
467 specked wood butterfly Pararge aegeria GCF_905163445.1_ilParAegt1.1 70 516,571,003 11 1,998 44.44
468 speckled mousebird (bColStr4 hap1 2023) Colius striatus GCF_028858725.1_bColStr4.1.hap1 191 1,212,482,152 161 5,847,728 23.44
469 speckled mousebird (hap1 2023) Colius striatus GCA_028858725.1_bColStr4.hap1 189 1,123,441,015 143 5,827,944 23.45
470 spotted gar (fLepOcu1hap2 2024) Lepisosteus oculatus GCF_040954835.1_fLepOcu1.hap2 816 1,200,589,847 95 19,000 38.23
471 spotted ratfish (hap2 2024) Hydrolagus colliei GCA_035084275.1_sHydCol1.hap2 532 1,003,172,678 1,952 390,400 44.82
472 starry smooth-hound (sMusAst1.hap1.1 2024) Mustelus asterias GCA_964213995.1_sMusAst1.hap1.1 5,314 3,679,792,345 3,590 718,000 54.95
473 sterlet (maternal fAciRut3.2 2022) Acipenser ruthenus GCF_902713425.1_fAciRut3.2_maternal_haplotype 1,731 1,899,810,788 433 86,300 43.22
474 stone loach (2022) Barbatula barbatula GCA_947034865.1_fBarBar1.1 100 617,663,352 825 165,000 39.89
475 striped catfish (fPanHyp1 primary hap 2022) Pangasianodon hypophthalmus GCF_027358585.1_fPanHyp1.pri 58 764,974,446 236 3,879,978 37.93
476 striped dolphin (primary hap 2023) Stenella coeruleoalba GCA_951394435.1_mSteCoe1.1 638 2,691,423,227 993 198,431 43.09
477 Sumatran orangutan (v2 AG06213 primary hap 2024 refseq) Pongo abelii GCF_028885655.2_NHGRI_mPonAbe1-v2.0_pri 30 3,259,870,029 11 8,061,256 54.90
478 Suruca trogon (2021) Trogon surrucura GCA_020746105.1_bTroSur1.pri.cur 182 1,165,749,515 253 10,270,755 22.51
479 Suwannee snapping turtle (hap2 2023) Macrochelys suwanniensis GCA_033349115.1_rMacSuw1.hap2 199 1,937,254,095 361 72,200 32.82
480 Swainson's thrush (v2 2020) Catharus ustulatus GCF_009819885.2_bCatUst1.pri.v2 160 1,131,616,530 429 12,903,695 22.52
481 swamp sparrow (bMelGeo1 primary hap 2023 refseq) Melospiza georgiana GCF_028018845.1_bMelGeo1.pri 40 1,162,015,399 236 1,233,091 24.53
482 swift parrot (bLatDis1hap1 2024) Lathamus discolor GCF_037157495.1_bLatDis1.hap1 367 1,241,003,407 186 2,209,747 26.11
483 tailed frog (A.truei hap1 2024) Ascaphus truei GCA_040206685.1_aAscTru1.hap1 3,549 3,722,616,900 6,020 1,204,076 55.73
484 tammar wallaby (mMacEug1 primary hap 2023) Notamacropus eugenii GCA_028372415.1_mMacEug1.pri 315 3,448,908,279 515 6,550,697 39.53
485 tarantolino (rEulEur1 2023) Euleptes europaea GCF_029931775.1_rEulEur1.hap1 591 1,781,916,107 153 4,045,040 39.82
486 Tasmanian devil Sarcophilus harrisii GCF_902635505.1_mSarHar1.11 106 3,086,674,442 354 46,771 44.34
487 tawny frogmouth (bPodStr1 primary hap 2023) Podargus strigoides GCA_028020825.1_bPodStr1.pri 1,038 1,271,141,449 203 2,167,278 27.67
488 tawny owl (hap1 2023) Strix aluco GCA_031877795.1_bStrAlu1.hap1 203 1,414,802,443 281 4,312,653 27.44
489 thickback sole (primary hap 2023) Microchirus variegatus GCA_963457635.1_fMicVar1.1 188 724,694,306 454 90,800 40.27
490 thicklip grey mullet (primary hap 2023) Chelon labrosus GCA_963514085.1_fCheLab1.1 363 717,420,143 610 122,000 27.59
491 thorny skate (v2 2020) Amblyraja radiata GCF_010909765.2_sAmbRad1.1.pri 957 2,558,784,953 3,753 190,972,533 52.28
492 tiny Cayenne caecilian Microcaecilia unicolor GCF_901765095.1_aMicUni1.1 1,081 4,685,939,420 2,452 47,437,278 52.44
493 torafugu (fTakRub1.3 2021 genbank) Takifugu rubripes GCA_901000725.3_fTakRub1.3 128 384,126,663 402 3,688,529 20.93
494 tourmaline sunangel (hap1 2024) Heliangelus exortis GCA_036169615.1_bHelExo1.hap1 131 1,049,650,714 437 85,400 21.23
495 Townsend's big-eared bat (haplotype 2 of 2 COTO_CA2020_CCGP 2022) Corynorhinus townsendii GCA_026230045.1_mCorTow1.0.hap2 182 1,961,562,149 217 21,700 36.37
496 trahira (hap2 2023) Hoplias malabaricus GCA_029633875.1_fHopMal1.hap2 452 1,117,251,445 907 44,518,715 39.05
497 trahira (v2 hap1 2024) Hoplias malabaricus GCA_029633855.2_fHopMal1.hap1 597 1,186,354,877 989 65,101,941 37.57
498 tufted duck Aythya fuligula GCF_009819795.1_bAytFul2.pri 105 1,127,004,725 163 9,417,397 22.39
499 Tungara frog (aEngPut4 2024) Engystomops pustulosus GCA_040894005.1_aEngPut4.maternal 936 2,158,203,323 436 87,200 52.56
500 tunicate A.aspersa (primary hap 2024) Ascidiella aspersa GCA_963924565.1_kaAscAspe10.1 75 308,571,401 393 73,800 35.09
501 tunicate A.turbinatum (primary hap 2021) Aplidium turbinatum GCA_918807975.1_kaAplTurb1.1 27 605,507,883 53 19,600 42.73
502 tunicate S.clava (kaStyClav1.hap1.1 2024) Styela clava GCA_964204865.1_kaStyClav1.hap1.1 389 377,969,001 34 6,800 38.35
503 turbot (primary hap 2023) Scophthalmus maximus GCA_963854745.1_fScoMax1.1 108 550,297,089 805 161,000 25.96
504 two-lined caecilian Rhinatrema bivittatum GCF_901001135.1_aRhiBiv1.1 1,330 5,319,239,201 3,573 33,955,840 66.86
505 two-lined caecilian (v1.2 2021 genbank) Rhinatrema bivittatum GCA_901001135.2_aRhiBiv1.2 1,330 5,319,239,186 3,573 33,955,840 44.11
506 vaquita (mPhoSin1 2019) Phocoena sinus GCF_008692025.1_mPhoSin1.pri 64 2,371,524,154 212 8,045,651 44.14
507 village indigobird (merged hap OUT-0048 2022 refseq) Vidua chalybeata GCF_026979565.1_bVidCha1_merged_haplotype 177 1,080,440,577 458 165,531 20.96
508 village indigobird (purged dups hap OUT-0048 2022) Vidua chalybeata GCA_026979555.1_bVidCha1_purged_dups_haplotype 1,939 154,870,056 0 0 34.87
509 warty frogfish (2020) Antennarius maculatus GCA_013358685.1_fAntMac1.pri 155 549,949,511 219 733,384 29.79
510 western capercaillie (primary hap 2023) Tetrao urogallus GCA_951394365.1_bTetUro1.1 318 1,013,184,029 973 194,600 21.16
511 western European hedgehog (primary hap 2023 genbank) Erinaceus europaeus GCA_950295315.1_mEriEur2.1 1,175 2,720,701,264 3,760 752,000 54.51
512 western European hedgehog (primary hap 2023 refseq) Erinaceus europaeus GCF_950295315.1_mEriEur2.1 1,174 2,720,683,831 3,760 752,000 54.51
513 western lowland gorilla (v2 KB3781 2024 refseq) Gorilla gorilla gorilla GCF_029281585.2_NHGRI_mGorGor1-v2.0_pri 26 3,545,850,636 2 2,000,000 50.90
514 Western terrestrial garter snake Thamnophis elegans GCF_009769535.1_rThaEle1.pri 365 1,672,190,305 1,518 38,185,703 42.64
515 whiskered bat (hap1 2024) Myotis mystacinus GCA_964094495.2_mMyoMys1.hap1.1 526 2,081,199,042 1,566 313,200 37.63
516 whiskered treeswift (2021) Hemiprocne comata GCA_020745705.1_bHemCom1.pri.cur 146 1,164,813,063 218 10,174,467 21.46
517 white leghorn X broiler chicken (leghorn haplotype v2 2021) Gallus gallus GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w 276 1,050,511,239 409 4,496,311 20.97
518 white-beaked dolphin (primary hap 2023 genbank) Lagenorhynchus albirostris GCA_949774975.1_mLagAlb1.1 410 2,544,835,795 1,070 214,000 39.75
519 white-beaked dolphin (primary hap 2023 refseq) Lagenorhynchus albirostris GCF_949774975.1_mLagAlb1.1 410 2,544,835,795 1,070 214,000 39.75
520 white-crowned manakin (hap1 2024) Pseudopipra pipra GCA_036250125.1_bDixPip1.hap1 697 1,165,219,370 323 64,600 21.92
521 white-tailed eagle (bHalAlb1.1 2022) Haliaeetus albicilla GCA_947461875.1_bHalAlb1.1 188 1,320,298,205 424 84,800 23.68
522 white-throated dipper (primary hap 2023) Cinclus cinclus GCA_963662255.1_bCinCin1.1 278 1,170,855,695 658 131,600 26.63
523 white-throated dipper (primary hap 2023) Cinclus cinclus GCF_963662255.1_bCinCin1.1 277 1,170,837,027 658 131,600 26.63
524 white-toothed pygmy shrew (mSunEtr1 primary hap 2022) Suncus etruscus GCF_024139225.1_mSunEtr1.pri.cur 147 2,471,666,657 1,010 10,644,072 46.52
525 white-tufted-ear marmoset (mCalJac1 2021) Callithrix jacchus GCF_011100555.1_mCalJa1.2.pat.X 1,233 2,874,864,526 1,165 13,690,514 47.55
526 whooping crane (bGruAme1 2023) Grus americana GCF_028858705.1_bGruAme1.mat 930 1,257,837,975 262 4,676,178 22.13
527 yellow-bellied toad (maternal hap 2024) Bombina variegata GCA_964205295.1_aBomVar4.maternal.1 4,757 9,369,791,316 6,671 1,334,200 3.72
528 yellow-crowned parrot (bAmaOch1hap1 2024) Amazona ochrocephala GCA_039720435.1_bAmaOch1.hap1 1,679 1,361,915,838 198 35,700 30.39
529 yellow-legged gull (primary hap 2024) Larus michahellis GCA_964199755.1_bLarMic1.1 618 1,405,581,498 500 100,000 29.78
530 yellow-spotted hyrax (mHetBru1 2023) Heterohyrax brucei GCA_028571685.1_mHetBru1.pri 62 3,488,059,404 276 68,688 45.91
531 yellow-throated sandgrouse Pterocles gutturalis GCA_009769525.1_bPteGut1.pri 89 1,127,422,757 242 4,303,557 21.19
532 yellowfin seabream Acanthopagrus latus GCF_904848185.1_fAcaLat1.1 66 685,144,197 149 14,900 22.83
533 yellowfin tuna (2021) Thunnus albacares GCF_914725855.1_fThuAlb1.1 68 792,101,331 70 23,300 27.09
534 zebra finch (refseq 2021 Blue55 female) Taeniopygia guttata GCF_003957565.2_bTaeGut1.4.pri 199 1,056,271,262 352 3,634,788 20.99
535 zebra shark (sSteTig4 primary hap 2023) Stegostoma tigrinum GCF_030684315.1_sSteTig4.hap1 835 3,198,515,386 1,159 17,106,481 64.64
536 zebrafish (WGS:CALUEM01 2022) Danio rerio GCA_944039275.1_fDanRer4.1 73 1,413,675,870 381 122,395 51.91
537 zig-zag eel (v1.3 2021 genbank) Mastacembelus armatus GCA_900324485.3_fMasArm1.3 123 591,951,591 238 13,231,344 23.47
TOTALS:total assembly count 537 303,617 1,022,796,024,553 454,031 3,378,016,977  
count common name
link to genome browser		 scientific name
and data download		 NCBI assembly sequence
count		genome size
nucleotides		 gap
count		unknown bases
(gap size sum)		masking
percent

Alternate sets of VGP assembliesNCBI Refseq
Index pages:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies
Assembly statistics:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies
Track statistics:  primary assembly alternate/haplotype trio mat/pat legacy/superseded other NCBI Refseq assemblies