GenArk: UCSC Genome Archive

hub gateway description
primates NCBI primate genomes (159 assemblies)
mammals NCBI mammal genomes (403 assemblies)
birds NCBI bird genomes (270 assemblies)
fishes NCBI fish genomes (269 assemblies)
vertebrate NCBI other vertebrate genomes (113 assemblies)
invertebrate NCBI invertebrate genomes (533 assemblies)
fungi NCBI fungi genomes (544 assemblies)
plants NCBI plant genomes (229 assemblies)
viral NCBI virus genomes (259 assemblies)
bacteria NCBI bacteria genomes (64 assemblies)
collections below are subsets of the assemblies above
VGP Vertebrate Genomes Project collection (446 assemblies)
CCGP The California Conservation Genomics Project (126 assemblies)
HPRC Human Pangenome Reference Consortium (96 assemblies)
globalReference Global Human Reference genomes, January 2020 (10 assemblies)
mouseStrains 16 mouse strain assembly and track hub, May 2017
legacy NCBI genomes legacy/superseded by newer versions (321 assemblies)

Please note: text file listing of 3167 genome assembly hubs

Please note, the invertebrate category contains more than just invertebrate animals. Until these clades are sorted out, with extra categories created, you will also find parasites, protozoa, and other single celled eukaryotes in the invertebrate grouping.

Please use the Assembly Request page to find and request GenBank assemblies that have not yet been included in the collections here.