UCSC TEST Genome Browser on Human Mar. 2006 (NCBI36/hg18)
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chr21:18,967,279-18,980,143 12,865 bp.
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-   Hub: FaceBase Hub Info  
CleftDeNovoCNVs13
cnvClTriosBeaty12
wgs_DPmrg
-   Mapping and Sequencing
Base Position
Alt Haplotypes
Assembly
BAC End Pairs
BU ORChID
Chromosome Band
Coverage
deCODE Recomb
FISH Clones
Fosmid End Pairs
Gap
GC Percent
HapsLocate
[No data-chr21]
Hg19 Diff
hg19 liftOver 500
Hi Seq Depth
Incorrect BAC End Pairs
Map Contigs
Mappability
PAR
[No data-chr21]
Recomb Rate
Restr Enzymes
Short Match
STS Markers
-   Phenotype and Disease Associations
ClinGen CNVs
Constraint scores
GAD View
GeneReviews
GWAS Catalog
MGI Mouse QTL
Omicia OMIM
[No data-chr21]
OMIM Alleles
OMIM Cyto Loci
OMIM Genes
R-DMR
RGD Human QTL
RGD Rat QTL
-   Genes and Gene Predictions
UCSC Genes
NCBI RefSeq
ACEScan
AceView Genes
Augustus
C. elegans Proteins
CCDS
CONTRAST
D. mel. Proteins (dm2)
Ensembl Genes
Ensembl Noncoding
EvoFold
EvoFold v.2
Exoniphy
ExonWalk
ExonWalk2
ExonWalkRnaNoCds
Gencode Genes
Geneid Genes
Genscan Genes
MGC Genes
N-SCAN
Old UCSC Genes
ORFeome Clones
Other RefSeq
Pfam in UCSC Gene
Pos Sel Genes
Protein BLAT
RNA Genes
SGP Genes
SIB Genes
sno/miRNA
sno/miRNA Old
Superfamily
tRNA Genes
UCSC Alt Events
UCSC Pseudo
Vega Genes
Yale Pseudo
-   mRNA and EST
Human mRNAs
Spliced ESTs
Alt-Splicing
Alt-Splicing2
CGAP SAGE
Fantom 4 CAGE
Fantom 4 Promoter
Gene Bounds
H-Inv
H-Inv(7.0)
Human ESTs
Human RNA Editing
Other ESTs
Other mRNAs
Poly(A)
SIB Alt Events
SIB Alt-Splicing
UniGene
-   Expression
Affy Exon
Affy GNF1H
Affy HuEx 1.0
Affy RNA Loc
Affy Txn
Affy U133
Affy U133Plus2
Affy U95
Allen Brain
B-Cell Transcriptome
Bertone Yale TAR
Burge RNA-seq
Caltech RNA-seq
CSHL Long RNA-seq
CSHL Sm RNA-seq
Duke Affy Exon
GIS PET Loc
GIS PET RNA
GIS RNA-seq
GNF Atlas 2
GNF Ratio
Helicos RNA-seq
HudsonAlpha RNA-seq
Human Normal
Illumina WG-6
NIBB Frog Images
RIKEN CAGE Loc
Sestan Brain
UCLA Tissues
UW Affy Exon
-   Regulation
ENCODE Regulation
7X Reg Potential
Barski ChIP-seq
Broad ChromHMM
Broad Histone
CHMM Enhancer All
CHMM Enhancer K562
CHMM Enhancer Peaks
CHMM Promoter All
CHMM Promoter K562
CHMM Promoter Peaks
CpG Islands
EIO/JCVI NAS
Eponine TSS
FirstEF
FOX2 CLIP-seq
GIS ChIP-PET
HAIB Methyl-seq
HAIB Methyl27
LI/UCSD TAF1
NHGRI Bi-Pro
NHGRI NRE
[No data-chr21]
NKI Nuc Lamina
Nucleosome Occupancy
Open Chromatin
ORegAnno
Stanf NRSF Counts
Stanf NRSF Sites
Stanf NRSF Tags
SUNY RBP
SwitchGear TSS
TFBS Conserved
TS miRNA sites
UCSF Brain Methyl
UMA/HA TFBS Val
Uppsala ChIP
UW 5C
UW DNase DGF
UW DNaseI HS
UW Histone
Vista Enhancers
Yale TFBS
-   Comparative Genomics
Conservation
17-Way Cons
17-Way Most Cons
28-Way Base Cons
28-Way Cons
28-Way Most Cons
Cons Indels MmCf
Primate RBest Chain/Net
Evo Cpg
phastBias gBGC
28-Way HQ
Clade Cons
Extended Ultras
Fugu Blat
GERP Conserved
Human Accelerated
Syn Conservation
Syntenic Nets
Ultra Conserved
D. mel. Chain
D. mel. Net
C. intestinalis Chain
C. intestinalis Net
ornAna1Pre Chain
ornAna1Pre Net
Boreoeutherian Chain
Megabat Chain/Net
Chimp Chain/Net
Chimp Chain/Net
panTro1 Chain/Net
Bonobo Chain/Net
gorGor1 Chain/Net
Gorilla Chain/Net
Orangutan Chain/Net
dasNov1 Chain/Net
Rhesus Chain/Net
Marmoset Chain/Net
Tarsier Chain/Net
Bushbaby Chain/Net
Mouse lemur Chain/Net
chimp/human Chain
Hominidae Chain
Hominidae Net
Guinea pig Chain/Net
oryCun1 Chain/Net
Rat Chain/Net
cavPor2 Chain/Net
Mouse Chain/Net
rn3 Chain/Net
mm7 Chain/Net
mm8 Chain/Net
Shrew Chain/Net
Hedgehog Chain/Net
Dog Chain/Net
Cat Chain/Net
Horse Chain/Net
bosTau4 Chain/Net
equCab2 Chain/Net
bosTau2 Chain/Net
bosTau3 Chain/Net
Dolphin Chain/Net
Alpaca Chain/Net
dasNov2 Chain/Net
Tenrec Chain/Net
Human Chain/Net
Tree shrew Chain/Net
Elephant Chain/Net
loxAfr2 Chain/Net
Opossum Chain/Net
monDom5 Chain/Net
Platypus Chain/Net
Lizard Chain/Net
Chicken Chain/Net
Zebra finch Chain/Net
xenTro2 Chain/Net
galGal2 Chain/Net
xenTro1 Chain/Net
Zebrafish Chain/Net
danRer3 Chain/Net
danRer4 Chain/Net
Stickleback Chain/Net
Medaka Chain/Net
oryLat1 Chain/Net
Fugu Chain/Net
fr1 Chain/Net
Tetraodon Chain/Net
Tetraodon Ecores
Lamprey Chain/Net
Lancelet Chain/Net
S. purpuratus Chain/Net
+   Neandertal Assembly and Analysis
+   Denisova Assembly and Analysis
-   Variation and Repeats
RepeatMasker
SNPs (130)
1000G Recomb Rt
1000Genomes Cov
Agilent Array
CENSOR Repeats
Common Cell CNV
Curated variants
DGV Beta (old)
DGV Struct Var
Exapted Repeats
Genome Variants
GIS DNA PET
HapMap LD Phased
HapMap LD Unph.
Hapmap Recomb
Hapmap Recomb BW
HapMap SNPs
HapMap SNPs Old
HGDP Allele Freq
HGDP Hetrzygsty
HGDP iHS
HGDP Smoothd FST
HGDP XP-EHH
HGSV Discordant
Human hapPos
Interrupted Rpts
Intr Rpts 3.2.7
Locus Variants
Microattribution
Microsatellite
NumtS Sequence
Pop Vars
RepMask 3.2.7
Segmental Dups
Self 2K Chain
Self Chain
Simple Repeats
SNPs (126)
SNPs (127)
SNPs (128)
SNPs (129)
Structural Var
Tajima's D
Tajima's D SNPs
UniProt Variants
WM + SDust
+   Pilot ENCODE Regions and Genes
+   Pilot ENCODE Transcription
+   Pilot ENCODE Chromatin Immunoprecipitation
+   Pilot ENCODE Chromatin Structure
+   Pilot ENCODE Comparative Genomics and Variation
+   Jim's Known Gene III Experiments Take 11
+   Jim's Known Gene III Experiments Take 10
-   Experimental
atom97565
atom992
atomHomIni20_1
cactusBed
cactusMaf
chainPonAbe0
Factor/Source
Hominidae Map
Hominidae Map
Metazoan Maf
Mm8 Chain WM
Mm8 Net WM
monDom4 Pile Ups
multiWig Test #1
Neandertal Chain
Primate Multiz
PSU Mammoth
Trace Stacks
VSIG MAF
Yale Unified TF
Zhao Nucleosome
[No data-chr21]
       
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