UCSC TEST Genome Browser on Human (GRCh38/hg38)
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chr1:11,177,047-11,193,537 16,491 bp.
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-   Mapping and Sequencing
Base Position
p14 Fix Patches
GRC Patch Release
p14 Alt Haplotypes
Assembly
Centromeres
Chromosome Band
Clone Ends
Clone Ends
Clone Ends Flagged
Exome Probesets
FISH Clones
Fosmid End Pairs
Gap
GC Percent
GRC Contigs
GRC Incident
Hg19 Diff
INSDC
LiftOver & ReMap
LRG Regions
Mappability
Problematic Regions
Recomb Rate
RefSeq Acc
Restr Enzymes
Scaffolds
Short Match
STS Markers
T2T Alignments
Tandem Dups
UCSC Clone Ends
-   Genes and Gene Predictions
GENCODE V46
NCBI RefSeq
CCDS
CRISPR
CRISPR 10K
Crispr kMers
CRISPR Targets
Ensembl Genes
Exoniphy
GENCODE Archive
GENCODE Versions
HGNC
IKMC Genes Mapped
LRG Transcripts
MANE
MGC/ORFeome Genes
Non-coding RNA
Old UCSC Genes
Other RefSeq
Pfam in GENCODE
Prediction Archive
RetroGenes V9
Retroposed Genes 8.0
sno/miRNA Old
TransMap V4
TransMap V5
TransMap V6
UCSC Alt Events
UniProt
-   Phenotype and Literature
OMIM Alleles
COVID Rare Harmful Var
new AbSplice Scores
CADD
Cancer Gene Expr
Cancer mutations
ClinGen
ClinGen CNVs
ClinVar Variants
ClinVar Variants ALPHA
Constraint scores
Coriell CNVs
COSMIC
COSMIC Regions
DECIPHER CNVs
DECIPHER SNVs
Development Delay
Dosage Sensitivity
new ENIGMA BRCA1/BRCA2 specs 1.1.0
GenCC
Gene Interactions
GeneReviews
GWAS Catalog
HGMD public
LOVD Variants
OMIM Cyto Loci
OMIM Genes
Orphanet
PanelApp
REVEL Scores
SNPedia
TCGA Pan-Cancer
UniProt Variants
Variants in Papers
-   Human Pangenome - HPRC
Multiple Alignment
Pairwise Alignments
Rearrangements
Short Variants
-   Single Cell RNA-seq
Blood (PBMC) Hao
Brain Dev Bhaduri
Colon Wang
Cortex Velmeshev
Cross Tissue Nuclei
Fetal Gene Atlas
Heart Cell Atlas
Hippocampus Ayhan
Ileum Wang
Kidney Stewart
Liver MacParland
Lung Travaglini
Merged Cells
Muscle De Micheli
Pancreas Baron
Placenta Vento-Tormo
Rectum Wang
Skin Sole-Boldo
Tabula Sapiens
Tooth Krivanek
-   mRNA and EST
Human ESTs
Human mRNAs
Other ESTs
Other mRNAs
SIB Alt Events
SIB Alt-Splicing
Spliced ESTs
-   Expression
GTEx Gene V8
GTEx RNA-Seq Coverage
Affy Archive
EPDnew Promoters
GNF Atlas 2
GTEx Brain
GTEx Gene
GTEx Transcript
GWIPS-viz Riboseq
miRNA Tissue Atlas
Nowakowski brain cell types
Quake Expression
-   Regulation
ENCODE cCREs
ENCODE Regulation
CpG Islands
new FANTOM5
GeneHancer
GTEx cis-eQTLs
Hi-C and Micro-C
updated JASPAR Transcription Factors
ORegAnno
RefSeq Func Elems
ReMap ChIP-seq
VISTA Enhancers
-   Comparative Genomics
145way
4-way Mammal
Conservation
Cactus 241-way
Cons 17 Primates
Cons 5 Verts
Cons 7 Verts
DB Cactus 241-way
Cons 10
Cons 20 Mammals
Cons 27 Primates
Cons 30 Primates
Mito Cons 204
TBA Cons 10
TBA Cons 204
Primate Chain/Net
Primate Syn Chain/Net
Primate RBest Chain/Net
Placental Chain/Net
Vertebrate Chain/Net
Cactus 447-way
CHM13 alignments
Cons 4-way
GERP Cons. 65 amniotes
Multiz 470-way
Asiatic elephant Chain/Net
Chicken Chain/Net
CHM13 T2T Chain/Net
crab-eating macaque Chain/Net
domestic cat Chain/Net
Golden hamster Chain/Net
HG01243.v3.0 Chain/Net
hs1/CHM13 T2T Chain/Net
Rambouillet sheep Chain/Net
D. melanogaster Chain/Net
western lowland gorilla Chain/Net
C. elegans Chain/Net
siamang Chain/Net
Ring-tailed lemur Chain/Net
white-tufted-ear marmoset Chain/Net
slow loris Chain/Net
Bornean orangutan Chain/Net
pygmy chimpanzee Chain/Net
chimpanzee Chain/Net
Sumatran orangutan Chain/Net
platypus Chain/Net
-   Variation
dbSNP 155
COVID GWAS v4
COVID GWAS v3
1000G Archive
updated Array Probesets
dbSNP Archive
dbVar Common Struct Var
DGV Struct Var
Genome In a Bottle
updated gnomAD Variants
NHLBI TOPMED
Platinum Genomes
Transcription response
-   Repeats
RepeatMasker
Interrupted Rpts
Microsatellite
RepeatMasker Viz.
Segmental Dups
Self Chain
Simple Repeats
WM + SDust
+   Experimental
Invisible link