Michae's Big MAF Track Settings
 
Michael Alignment   (All Experimental tracks)

Display mode:      Duplicate track

Species selection:  + -

bonobo
 chimp
 gorilla
 orangutan
 hLhylMol2
hLnomLeu4
 hLpapAnu5
 hLtheGel1
 sooty mangabey
 hLmanSph1
drill
 pig-tailed macaque
 hLmacFas6
 hLmacFus1
 rhesus
hLcerMon1
 hLcerNeg1
 hLallNig1
 hLeryPat1
 green monkey
hLpilTep2
 angolan colobus
 hLsemEnt1
 hLtraFra1
 proboscis monkey
hLpygNem1
 hLrhiRox2
 black snub-nosed monkey
 hLpitPit1
 hLpleDon1
hLateGeo1
 hLaloPal1
 hLsaiBol1
 squirrel monkey
 hLsapApe1
white-faced sapajou
 hLcebAlb1
 ma's night monkey
 hLsagImp1
 hLcalJac4
hLcalPym1
 tarsier
 hLnycCou1
 bushbaby
 hLcheMed1
coquerel's sifaka
 hLindInd1
 hLlemCat1
 hLproSim1
 hLeulFul1
hLeulMon1
 sclater's lemur
 hLeulFla1
 black lemur
 hLmicTav1
hLmicSpe31
 mouse lemur
 hLmirZaz1
 hLmirCoq1
 hLdauMad1
hLgalVar2
 hLacoRus1
 hLacoCah1
 hLpsaObe1
 hLmerUng1
hLrhoOpi1
 hLratNor7
 rat
 hLratRat7
 mouse
mouse
 hLmusSpi1
 hLmusSpr1
 hLmusCar1
 hLmusPah1
hLmasCou1
 hLapoSyl1
 hLgraSur1
 hLarvNil1
 hLcriGri3
golden hamster
 hLonyTor1
 hLperNas1
 hLperCri1
 hLperEre1
hLperCal2
 hLperLeu1
 hLperManBai2
 hLperPol1
 hLneoLep1
hLsigHis1
 hLondZib1
 hLmyoGla2
 hLellTal1
 hLellLut1
hLarvAmp1
 hLmicFor1
 hLmicOec1
 prairie vole
 hLmicArv1
hLmicAgr2
 hLcriGam1
 upper Galilee mountains blind mole rat
 hLrhiPru1
 lesser Egyptian jerboa
hLallBul1
 hLzapHud1
 hLcasCan3
 hLperLonPac1
 hLdipSte1
kangaroo rat
 hLpedCap1
 hLcteGun1
 hLhysCri1
 hLereDor1
hLcoePre1
 hLdasPun1
 hLhydHyd1
 hLcavTsc1
 guinea pig
brazilian guinea pig
 hLdolPat1
 chinchilla
 hLdinBra1
 hLmyoCoy1
hLcteSoc1
 brush-tailed rat
 hLthrSwi1
 hLpetTyp1
 naked mole-rat
hLfukDam2
 hLaplRuf1
 hLsciVul1
 hLsciCar1
 hLxerIna1
hLmarFla1
 hLmarHim1
 hLmarMar1
 hLmarVan1
 hLmarMon1
hLmarMon2
 hLspeDau1
 hLuroPar1
 squirrel
 hLcynGun1
hLmusAve1
 hLgraMur1
 hLgliGli1
 pika
 hLsylBac1
hLoryCunCun4
 rabbit
 hLoryCun3
 hLlepAme1
 hLlepTim1
tree shrew
 chinese tree shrew
 tibetan antelope
 hLoviCan1
 hLhemHyl1
hLoviCan2
 hLoviNivLyd1
 hLoviAmm1
 hLoviAri5
 hLoviOri1
hLammLer1
 hLoreAme1
 hLcapSib1
 hLcapIbe1
 hLcapHir2
hLcapAeg1
 hLconTau2
 hLbeaHun1
 hLdamLun1
 hLoryGaz1
hLoryDam1
 hLhipNig1
 hLhipEqu1
 hLredRed1
 hLkobEll1
hLkobLecLec1
 hLmadKir1
 hLrapCam1
 hLeudTho1
 hLsaiTat1
hLantMar1
 hLlitWal1
 hLcepHar1
 hLsylGri1
 hLphiMax1
hLoreOre1
 hLneoPyg1
 hLnanGra1
 hLproPrz1
 hLneoMos1
hLaepMel1
 hLbubBub2
 hLsynCaf1
 hLtraImb1
 hLtraStr1
hLtraScr1
 hLbosFro1
 hLbosGau1
 hLbosGru1
 hLbosMut2
cow
 hLbosInd2
 bison
 hLmosMos1
 hLmosBer1
hLmosChr1
 hLhydIne1
 hLcapPyg1
 hLalcAlc1
 hLelaDav1
hLranTar1
 hLranTarGra2
 hLodoHem1
 hLodoVir3
 hLodoVir2
hLodoVir1
 hLmunRee1
 hLmunMun1
 hLmunCri1
 hLcerHanYar1
hLaxiPor1
 hLprzAlb1
 hLcerEla1
 hLantAme1
 hLokaJoh2
hLgirCam1
 hLgirTip1
 hLgirCam2
 hLtraKan1
 hLtraJav1
killer whale
 hLhipAmp1
 hLhipAmp3
 hLphyCat2
 sperm whale
hLkogBre1
 hLplaMin1
 hLzipCav1
 hLmesBid1
 hLlagObl1
hLgloMel1
 hLpepEle1
 hLsouChi1
 hLturAdu2
 hLturAdu1
hLturTru4
 dolphin
 hLturTru3
 hLdelLeu2
 hLmonMon1
hLneoAsi1
 hLphoSin1
 hLphoPho2
 hLphoPho1
 yangtze river dolphin
hLponBla1
 hLlniGeo1
 minke whale
 hLbalBon1
 hLbalPhy1
hLmegNov1
 hLbalMus1
 hLbalEde1
 hLescRob1
 hLeubGla1
hLeubJap1
 hLbalMys1
 pig
 hLcatWag1
 hLcamFer3
hLcamDro2
 hLcamBac1
 hLlamGla1
 hLlamGuaCac1
 hLlamGlaCha1
hLvicPacHua3
 hLvicVicMen1
 alpaca
 hLtapTer1
 hLtapInd1
hLtapInd2
 hLrhiUni1
 hLdicSum1
 hLdicBic1
 white rhinoceros
hLcerSimCot1
 przewalski horse
 horse
 hLequQuaBoe1
 hLequAsi1
hLequAsiAsi2
 hLursThi1
 hLursAme1
 hLursAme2
 polar bear
hLursArc1
 hLailMel2
 hLpotFla1
 hLnasNar1
 hLbasSum1
hLproLot1
 hLeriBar1
 hLhalGry1
 hLphoVit1
 hawaiian monk seal
weddell seal
 hLmirLeo1
 pacific walrus
 hLodoRos1
 hLcalUrs1
hLarcGaz2
 hLzalCal1
 hLeumJub1
 hLailFul2
 hLmusFur2
hLmusPut1
 hLmusErm1
 hLneoVis1
 northern sea otter
 southern sea otter
hLlutLut1
 hLlonCan1
 hLpteBra1
 hLpteBra2
 hLgulGul1
hLmarZib1
 hLcroCro1
 hLhyaHya1
 hLparHer1
 hLpanLeo1
hLpanOnc2
 hLpanOnc1
 hLpanPar1
 amur tiger
 hLneoNeb1
hLfelNig1
 cat
 hLpumYag1
 hLlynPar1
 hLlynCan1
hLpriBen1
 hLpumCon1
 hLaciJub2
 hLtaxTax1
 hLmirAng2
hLvulVul1
 hLvulLag1
 hLlycPic2
 hLlycPic3
 dog
hLcanLupDin1
 dog
 hLmanJav1
 hLmanJav2
 hLmanPen2
chinese pangolin
 hLphaTri2
 hLmanTri1
 hLmelCap1
 hLspiGra1
hLmunMug1
 hLhelPar1
 hLsurSur1
 hLsurSur2
 hLcryFer2
hLsacBil1
 hLnatTum1
 hLmyoMyo6
 david's myotis (bat)
 hLmyoLuc1
little brown bat
 brandt's myotis (bat)
 hLmyoSep1
 hLmurAurFea1
 hLnycHum2
hLaeoCin1
 hLlasBor1
 big brown bat
 hLantPal1
 hLpipKuh2
hLpipPip1
 hLpipPip2
 hLminSch1
 hLminNat1
 hLmolMol2
hLtadBra2
 hLtadBra1
 hLmacCal1
 hLlepYer1
 hLgloSor2
hLanoCau1
 hLartJam2
 hLartJam1
 hLstuHon1
 hLcarPer3
hLcarPer2
 hLtonSau1
 hLphyDis3
 hLdesRot2
 hLmicHir1
parnell's mustached bat
 hLmorBla1
 hLnocLep2
 hLnocLep1
 hLeonSpe1
hLrouLes1
 hLrouAeg4
 hLrouMad1
 hLrhiSed1
 hLrhiTri1
hLrhiLuc1
 hLrhiSin1
 hLrhiAff1
 hLaseSto1
 hLcraTho1
hLmegLyr2
 hLhipArm1
 hLhipLar1
 hLhipGal1
 hLhipCyc1
hLrhiFer5
 hLpteRuf1
 hLpteGig1
 hLpteVam2
 hLptePse1
black flying-fox
 hLeidHel2
 hLeidDup1
 hLmacSob1
 hLcynBra1
hLsolPar1
 hedgehog
 shrew
 hLuroGra1
 hLscaAqu1
hLtalOcc1
 star-nosed mole
 tenrec
 hLmicTal1
 cape elephant shrew
aardvark
 cape golden mole
 hLhetBru1
 hLproCap3
 hLloxAfr4
hLeleMax1
 hLhydGig1
 manatee
 hLdugDug1
 armadillo
hLtolMat1
 hLtamTet1
 hLmyrTri1
 hLchoHof3
 hLchoDid2
hLchoDid1
 hLphaGym1
 hLtriVul1
 hLpseOcc1
 hLpseCor1
hLthyCyn1
 hLantFla1
 hLsarHar2
 hLdidVir1
 hLgraAgi1
opossum
 hLphaCin1
 hLvomUrs1
 wallaby
 hLnotEug3
hLospRuf1
 hLmacGig1
 hLmacFul1
 hLgymLea1
 hLpseCup1
hLtacAcu1
 hLornAna3

Multiple alignment base-level:
Display bases identical to reference as dots
Display chains between alignments

Codon highlighting:
  Alternate colors every bases
  Offset alternate colors by bases

Data schema/format description and download
Assembly: Human Dec. 2013 (GRCh38/hg38)
Data last updated at UCSC: 2022-05-07 12:22:35