Gene interactions and pathways from curated databases and text-mining
BDNF: top 25 interacting genes (chr11:27676439-27722002)
Mouse over or click genes or lines for details. Dashed lines indicate interactions without text mining support. Click any gene to make it the new center. Click any line to show details about the interaction. Only BDNF-interacting genes and only the most-mentioned/most-curated interactions are shown in the graph. See the Help Page for details.
Gene:               Hide non-BDNF interactions     Show top Genes on graph    

Less-frequently mentioned interactions with BDNF, not among the Top 25
Other genes interacting with BDNF. Mouse-over to show number of abstracts or databases. Sorted alphabetically (sort by article count).
Like above, interactions are colored by support. Grey:only text mining, light-blue:interaction database, blue:pathway database

ACACB ACAD8 ADAM17 ADCYAP1 AGO3 AMPH APP
ARC BAX BCL2 BMP1 BMP2 CA2 CADPS2
CALB1 CALB2 CALM1 CALM2 CALM3 CAMK1 CAMK4
CAMKK1 CAPN2 CAPS2 CARF CASP1 CASP10 CASP12
CASP14 CASP16 CASP2 CASP3 CASP4 CASP5 CASP6
CASP7 CASP8 CASP9 CAT CCNC CCND1 CDC42
CDH2 CDK5 CDK8 CDKN1A CEP104 CEP112 CEP120
CEP128 CEP135 CEP152 CEP164 CEP170 CEP19 CEP192
CEP250 CEP290 CEP350 CEP41 CEP44 CEP55 CEP57
CEP63 CEP68 CEP70 CEP72 CEP76 CEP78 CEP85
CEP89 CEP95 CEP97 CFL1 CFL2 CHAT CKAP2
CKAP4 CKAP5 CORT CPE CPP CRH CRK
CRKL CRTC1 CSF2 CTNNA1 CTNNB1 CTNND1 CXCR4
DLG4 DRD3 DYNLT1 EEF2K EGR1 EGR3 EGR4
EHD4 EIF4E ELL2 ELL3 EPO EPX ESR1
F11R FGF2 FGFR3 FOS FOXO3 FRS2 FRS3
FSCN1 FYN GAB1 GABBR1 GABBR2 GABRA1 GABRB2
GABRG2 GAD1 GAD2 GAL GAP43 GDNF GFAP
GGT1 GIPC1 GNB2L1 GRAP2 GRB2 GRIA1 GRIN2A
GRIN2B GRIN2C GSK3B GSN HAL HCLS1 HDAC1
HDAC2 HDAC5 HRAS HSPG2 HTR1A HTR2A HTT
IFI44 IFNB1 IFNG IGF1 IL1A IL1B IL2RB
IL4 IL6 INPP5K INS IRF6 IRS2 JUN
JUNB KCNH4 KLK3 LTF MAP1B MAP2K5 MBP
MBTPS1 MC4R MECP2 MED1 MED12 MED13 MED14
MED15 MED17 MED21 MED23 MED24 MED25 MED26
MED4 MED6 MED7 MED8 MET MMP1 MMP2
MMP9 MS MTOR MYLIP NA NDP NEUROD1
NEUROD2 NEUROD4 NEUROD6 NFATC4 NFKB1 NGFB NOS1
NOS2 NOS3 NOX1 NOX3 NOX4 NOX5 NPS
NTF4 NTRK1 NTRK3 NUP43 P2RX4 PARP1 PDCD1
PDCD10 PDCD11 PDCD2 PDCD4 PDCD5 PDCD6 PDCD7
PI3 PIK3CA PIK3R1 PKM PLAT PLCG1 PLCG2
POLDIP2 PPP1R1B PRH2 PRKAA1 PRKAA2 PRKAB1 PRKAB2
PRKACB PRKACG PRKAG1 PRKAG2 PRKAR1A PRKAR1B PRKAR2A
PRKAR2B PRKCA PSD PTPN11 RAC1 RAC2 RAC3
RAP1A RAP1B RASA1 RBBP4 RBBP7 RELA REST
RHO RIT1 RIT2 RNF19A S100A12 SHC1 SHH
SIGLEC7 SIN3A SIRPA SMAD1 SNAP25 SOD1 SORT1
SOS1 SPP1 SST STMN1 SULT1A3 SYN1 SYN2
SYN3 SYP SYT1 SYT10 SYT11 SYT12 SYT13
SYT14 SYT15 SYT16 SYT17 SYT2 SYT3 SYT4
SYT5 SYT6 SYT7 SYT8 SYT9 TAT TCF12
TCF15 TCF19 TCF20 TCF21 TCF23 TCF24 TCF25
TCF3 TCF4 TCF7 TH TIAM1 TNF TNFRSF1B
TPM1 TPM2 TPM3 TPM4 TRAF6 TRH TYR
UCP1 USF1 USF2 VEGFA VIP XBP1 ZNF274
Data information
Please see the Gene Interactions Track Manual.