# Assembly name: bPsiEch3.1 # Organism name: Psittacula echo (Mauritius parakeet) # Taxid: 232653 # BioSample: SAMEA12361725 # BioProject: PRJEB65273 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2023-08-20 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAUJLS01 # Assembly method: various # Genome coverage: 79x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_963264785.1 # RefSeq assembly accession: GCF_963264785.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_963243765.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_963264784.1 GCF_963264784.1 Primary Assembly ## GCA_963264786.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OY725420.1 = NC_137735.1 Primary Assembly 168074981 na SUPER_2 assembled-molecule 2 Chromosome OY725421.1 = NC_137737.1 Primary Assembly 161936662 na SUPER_3 assembled-molecule 3 Chromosome OY725422.1 = NC_137736.1 Primary Assembly 128362850 na SUPER_4 assembled-molecule 4 Chromosome OY725423.1 = NC_137738.1 Primary Assembly 122792946 na SUPER_5 assembled-molecule 5 Chromosome OY725425.1 = NC_137739.1 Primary Assembly 90324139 na SUPER_6 assembled-molecule 6 Chromosome OY725426.1 = NC_137743.1 Primary Assembly 79815536 na SUPER_7 assembled-molecule 7 Chromosome OY725427.1 = NC_137740.1 Primary Assembly 66741758 na SUPER_8 assembled-molecule 8 Chromosome OY725428.1 = NC_137744.1 Primary Assembly 24677046 na SUPER_9 assembled-molecule 9 Chromosome OY725429.1 = NC_137745.1 Primary Assembly 23825977 na SUPER_10 assembled-molecule 10 Chromosome OY725430.1 = NC_137741.1 Primary Assembly 22797502 na SUPER_11 assembled-molecule 11 Chromosome OY725431.1 = NC_137746.1 Primary Assembly 21176705 na SUPER_12 assembled-molecule 12 Chromosome OY725432.1 = NC_137747.1 Primary Assembly 17149999 na SUPER_13 assembled-molecule 13 Chromosome OY725433.1 = NC_137749.1 Primary Assembly 15499813 na SUPER_14 assembled-molecule 14 Chromosome OY725434.1 = NC_137750.1 Primary Assembly 13940127 na SUPER_15 assembled-molecule 15 Chromosome OY725435.1 = NC_137751.1 Primary Assembly 12757604 na SUPER_16 assembled-molecule 16 Chromosome OY725436.1 = NC_137752.1 Primary Assembly 12426226 na SUPER_17 assembled-molecule 17 Chromosome OY725437.1 = NC_137753.1 Primary Assembly 8980196 na SUPER_18 assembled-molecule 18 Chromosome OY725438.1 = NC_137754.1 Primary Assembly 7907593 na SUPER_19 assembled-molecule 19 Chromosome OY725439.1 = NC_137755.1 Primary Assembly 7903175 na SUPER_20 assembled-molecule 20 Chromosome OY725440.1 = NC_137756.1 Primary Assembly 7853018 na SUPER_21 assembled-molecule 21 Chromosome OY725441.1 = NC_137757.1 Primary Assembly 7783866 na SUPER_22 assembled-molecule 22 Chromosome OY725442.1 = NC_137758.1 Primary Assembly 7503504 na SUPER_23 assembled-molecule 23 Chromosome OY725443.1 = NC_137748.1 Primary Assembly 6572200 na SUPER_24 assembled-molecule 24 Chromosome OY725444.1 = NC_137759.1 Primary Assembly 6491289 na SUPER_25 assembled-molecule 25 Chromosome OY725445.1 = NC_137760.1 Primary Assembly 6366056 na SUPER_26 assembled-molecule 26 Chromosome OY725446.1 = NC_137761.1 Primary Assembly 4641482 na SUPER_27 assembled-molecule 27 Chromosome OY725447.1 = NC_137762.1 Primary Assembly 4270446 na SUPER_28 assembled-molecule 28 Chromosome OY725448.1 = NC_137763.1 Primary Assembly 2763882 na SUPER_29 assembled-molecule 29 Chromosome OY725449.1 = NC_137764.1 Primary Assembly 2474005 na SUPER_30 assembled-molecule 30 Chromosome OY725450.1 = NC_137765.1 Primary Assembly 1406298 na SUPER_31 assembled-molecule 31 Chromosome OY725451.1 = NC_137766.1 Primary Assembly 1114097 na SUPER_32 assembled-molecule 32 Chromosome OY725452.1 = NC_137767.1 Primary Assembly 490420 na SUPER_33 assembled-molecule 33 Chromosome OY725453.1 = NC_137768.1 Primary Assembly 478979 na SUPER_34 assembled-molecule 34 Chromosome OY725454.1 = NC_137769.1 Primary Assembly 229273 na SUPER_Z assembled-molecule Z Chromosome OY725424.1 = NC_137742.1 Primary Assembly 106987384 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome CAUJLS010000001.1 = NW_027664283.1 Primary Assembly 584200 na SCAFFOLD_169 unplaced-scaffold na na CAUJLS010000002.1 = NW_027664282.1 Primary Assembly 38272 na SCAFFOLD_58 unplaced-scaffold na na CAUJLS010000003.1 = NW_027664281.1 Primary Assembly 464477 na SCAFFOLD_52 unplaced-scaffold na na CAUJLS010000004.1 = NW_027664280.1 Primary Assembly 616506 na SCAFFOLD_57 unplaced-scaffold na na CAUJLS010000005.1 = NW_027664279.1 Primary Assembly 466000 na SCAFFOLD_145 unplaced-scaffold na na CAUJLS010000006.1 = NW_027664278.1 Primary Assembly 62000 na SCAFFOLD_158 unplaced-scaffold na na CAUJLS010000007.1 = NW_027664277.1 Primary Assembly 50209 na SCAFFOLD_100 unplaced-scaffold na na CAUJLS010000008.1 = NW_027664276.1 Primary Assembly 145000 na SCAFFOLD_152 unplaced-scaffold na na CAUJLS010000009.1 = NW_027664275.1 Primary Assembly 55806 na SCAFFOLD_60 unplaced-scaffold na na CAUJLS010000010.1 = NW_027664274.1 Primary Assembly 406000 na SCAFFOLD_103 unplaced-scaffold na na CAUJLS010000011.1 = NW_027664273.1 Primary Assembly 134000 na SCAFFOLD_75 unplaced-scaffold na na CAUJLS010000012.1 = NW_027664272.1 Primary Assembly 291000 na SCAFFOLD_199 unplaced-scaffold na na CAUJLS010000013.1 = NW_027664271.1 Primary Assembly 1000 na SCAFFOLD_151 unplaced-scaffold na na CAUJLS010000014.1 = NW_027664270.1 Primary Assembly 56000 na SCAFFOLD_144 unplaced-scaffold na na CAUJLS010000015.1 = NW_027664269.1 Primary Assembly 63000 na SCAFFOLD_157 unplaced-scaffold na na CAUJLS010000016.1 = NW_027664268.1 Primary Assembly 50532 na SCAFFOLD_34 unplaced-scaffold na na CAUJLS010000017.1 = NW_027664267.1 Primary Assembly 1544738 na SCAFFOLD_88 unplaced-scaffold na na CAUJLS010000018.1 = NW_027664266.1 Primary Assembly 181975 na SCAFFOLD_95 unplaced-scaffold na na CAUJLS010000019.1 = NW_027664265.1 Primary Assembly 163000 na SCAFFOLD_156 unplaced-scaffold na na CAUJLS010000020.1 = NW_027664264.1 Primary Assembly 51945 na SCAFFOLD_119 unplaced-scaffold na na CAUJLS010000021.1 = NW_027664263.1 Primary Assembly 93000 na SCAFFOLD_139 unplaced-scaffold na na CAUJLS010000022.1 = NW_027664262.1 Primary Assembly 64992 na SCAFFOLD_64 unplaced-scaffold na na CAUJLS010000023.1 = NW_027664261.1 Primary Assembly 355449 na SCAFFOLD_159 unplaced-scaffold na na CAUJLS010000024.1 = NW_027664260.1 Primary Assembly 49261 na SCAFFOLD_79 unplaced-scaffold na na CAUJLS010000025.1 = NW_027664259.1 Primary Assembly 243685 na SCAFFOLD_125 unplaced-scaffold na na CAUJLS010000026.1 = NW_027664258.1 Primary Assembly 80378 na SCAFFOLD_191 unplaced-scaffold na na CAUJLS010000027.1 = NW_027664257.1 Primary Assembly 4000 na SCAFFOLD_54 unplaced-scaffold na na CAUJLS010000028.1 = NW_027664256.1 Primary Assembly 546168 na SCAFFOLD_175 unplaced-scaffold na na CAUJLS010000029.1 = NW_027664255.1 Primary Assembly 34385 na SCAFFOLD_116 unplaced-scaffold na na CAUJLS010000030.1 = NW_027664254.1 Primary Assembly 97147 na SCAFFOLD_162 unplaced-scaffold na na CAUJLS010000031.1 = NW_027664253.1 Primary Assembly 44867 na SCAFFOLD_185 unplaced-scaffold na na CAUJLS010000032.1 = NW_027664252.1 Primary Assembly 24082 na SCAFFOLD_168 unplaced-scaffold na na CAUJLS010000033.1 = NW_027664251.1 Primary Assembly 38767 na SCAFFOLD_136 unplaced-scaffold na na CAUJLS010000034.1 = NW_027664250.1 Primary Assembly 68000 na SCAFFOLD_117 unplaced-scaffold na na CAUJLS010000035.1 = NW_027664249.1 Primary Assembly 96224 na SCAFFOLD_198 unplaced-scaffold na na CAUJLS010000036.1 = NW_027664248.1 Primary Assembly 1000 na SCAFFOLD_93 unplaced-scaffold na na CAUJLS010000037.1 = NW_027664247.1 Primary Assembly 165893 na SCAFFOLD_192 unplaced-scaffold na na CAUJLS010000038.1 = NW_027664246.1 Primary Assembly 3000 na SCAFFOLD_161 unplaced-scaffold na na CAUJLS010000039.1 = NW_027664245.1 Primary Assembly 45000 na SCAFFOLD_137 unplaced-scaffold na na CAUJLS010000040.1 = NW_027664244.1 Primary Assembly 68000 na SCAFFOLD_46 unplaced-scaffold na na CAUJLS010000041.1 = NW_027664243.1 Primary Assembly 1017603 na SCAFFOLD_76 unplaced-scaffold na na CAUJLS010000042.1 = NW_027664242.1 Primary Assembly 280399 na SCAFFOLD_91 unplaced-scaffold na na CAUJLS010000043.1 = NW_027664241.1 Primary Assembly 172105 na SCAFFOLD_167 unplaced-scaffold na na CAUJLS010000044.1 = NW_027664240.1 Primary Assembly 39051 na SCAFFOLD_184 unplaced-scaffold na na CAUJLS010000045.1 = NW_027664239.1 Primary Assembly 24233 na SCAFFOLD_180 unplaced-scaffold na na CAUJLS010000046.1 = NW_027664238.1 Primary Assembly 29976 na SCAFFOLD_131 unplaced-scaffold na na CAUJLS010000047.1 = NW_027664237.1 Primary Assembly 73000 na SCAFFOLD_43 unplaced-scaffold na na CAUJLS010000048.1 = NW_027664236.1 Primary Assembly 1052483 na SCAFFOLD_73 unplaced-scaffold na na CAUJLS010000049.1 = NW_027664235.1 Primary Assembly 302514 na SCAFFOLD_84 unplaced-scaffold na na CAUJLS010000050.1 = NW_027664234.1 Primary Assembly 215000 na SCAFFOLD_196 unplaced-scaffold na na CAUJLS010000051.1 = NW_027664233.1 Primary Assembly 2000 na SCAFFOLD_111 unplaced-scaffold na na CAUJLS010000052.1 = NW_027664232.1 Primary Assembly 122000 na SCAFFOLD_174 unplaced-scaffold na na CAUJLS010000053.1 = NW_027664231.1 Primary Assembly 35733 na SCAFFOLD_96 unplaced-scaffold na na CAUJLS010000054.1 = NW_027664230.1 Primary Assembly 161818 na SCAFFOLD_120 unplaced-scaffold na na CAUJLS010000055.1 = NW_027664229.1 Primary Assembly 92323 na SCAFFOLD_124 unplaced-scaffold na na CAUJLS010000056.1 = NW_027664228.1 Primary Assembly 82000 na SCAFFOLD_71 unplaced-scaffold na na CAUJLS010000057.1 = NW_027664227.1 Primary Assembly 308000 na SCAFFOLD_62 unplaced-scaffold na na CAUJLS010000058.1 = NW_027664226.1 Primary Assembly 374178 na SCAFFOLD_132 unplaced-scaffold na na CAUJLS010000059.1 = NW_027664225.1 Primary Assembly 71000 na SCAFFOLD_67 unplaced-scaffold na na CAUJLS010000060.1 = NW_027664224.1 Primary Assembly 328000 na SCAFFOLD_99 unplaced-scaffold na na CAUJLS010000061.1 = NW_027664223.1 Primary Assembly 152000 na SCAFFOLD_138 unplaced-scaffold na na CAUJLS010000062.1 = NW_027664222.1 Primary Assembly 65000 na SCAFFOLD_166 unplaced-scaffold na na CAUJLS010000063.1 = NW_027664221.1 Primary Assembly 39172 na SCAFFOLD_183 unplaced-scaffold na na CAUJLS010000064.1 = NW_027664220.1 Primary Assembly 26439 na SCAFFOLD_173 unplaced-scaffold na na CAUJLS010000065.1 = NW_027664219.1 Primary Assembly 36000 na SCAFFOLD_118 unplaced-scaffold na na CAUJLS010000066.1 = NW_027664218.1 Primary Assembly 94346 na SCAFFOLD_123 unplaced-scaffold na na CAUJLS010000067.1 = NW_027664217.1 Primary Assembly 87258 na SCAFFOLD_112 unplaced-scaffold na na CAUJLS010000068.1 = NW_027664216.1 Primary Assembly 117337 na SCAFFOLD_197 unplaced-scaffold na na CAUJLS010000069.1 = NW_027664215.1 Primary Assembly 1000 na SCAFFOLD_70 unplaced-scaffold na na CAUJLS010000070.1 = NW_027664214.1 Primary Assembly 308292 na SCAFFOLD_153 unplaced-scaffold na na CAUJLS010000071.1 = NW_027664213.1 Primary Assembly 53970 na SCAFFOLD_51 unplaced-scaffold na na CAUJLS010000072.1 = NW_027664212.1 Primary Assembly 667281 na SCAFFOLD_146 unplaced-scaffold na na CAUJLS010000073.1 = NW_027664211.1 Primary Assembly 61388 na SCAFFOLD_89 unplaced-scaffold na na CAUJLS010000074.1 = NW_027664210.1 Primary Assembly 179381 na SCAFFOLD_65 unplaced-scaffold na na CAUJLS010000075.1 = NW_027664209.1 Primary Assembly 350692 na SCAFFOLD_53 unplaced-scaffold na na CAUJLS010000076.1 = NW_027664208.1 Primary Assembly 571000 na SCAFFOLD_147 unplaced-scaffold na na CAUJLS010000077.1 = NW_027664207.1 Primary Assembly 60891 na SCAFFOLD_154 unplaced-scaffold na na CAUJLS010000078.1 = NW_027664206.1 Primary Assembly 53481 na SCAFFOLD_150 unplaced-scaffold na na CAUJLS010000079.1 = NW_027664205.1 Primary Assembly 56425 na SCAFFOLD_86 unplaced-scaffold na na CAUJLS010000080.1 = NW_027664204.1 Primary Assembly 198000 na SCAFFOLD_106 unplaced-scaffold na na CAUJLS010000081.1 = NW_027664203.1 Primary Assembly 133373 na SCAFFOLD_141 unplaced-scaffold na na CAUJLS010000082.1 = NW_027664202.1 Primary Assembly 64558 na SCAFFOLD_59 unplaced-scaffold na na CAUJLS010000083.1 = NW_027664201.1 Primary Assembly 453000 na SCAFFOLD_81 unplaced-scaffold na na CAUJLS010000084.1 = NW_027664200.1 Primary Assembly 234000 na SCAFFOLD_74 unplaced-scaffold na na CAUJLS010000085.1 = NW_027664199.1 Primary Assembly 293000 na SCAFFOLD_90 unplaced-scaffold na na CAUJLS010000086.1 = NW_027664198.1 Primary Assembly 173000 na SCAFFOLD_189 unplaced-scaffold na na CAUJLS010000087.1 = NW_027664197.1 Primary Assembly 13000 na SCAFFOLD_56 unplaced-scaffold na na CAUJLS010000088.1 = NW_027664196.1 Primary Assembly 520942 na SCAFFOLD_179 unplaced-scaffold na na CAUJLS010000089.1 = NW_027664195.1 Primary Assembly 30268 na SCAFFOLD_142 unplaced-scaffold na na CAUJLS010000090.1 = NW_027664194.1 Primary Assembly 64495 na SCAFFOLD_129 unplaced-scaffold na na CAUJLS010000091.1 = NW_027664193.1 Primary Assembly 75639 na SCAFFOLD_148 unplaced-scaffold na na CAUJLS010000092.1 = NW_027664192.1 Primary Assembly 60102 na SCAFFOLD_155 unplaced-scaffold na na CAUJLS010000093.1 = NW_027664191.1 Primary Assembly 52000 na SCAFFOLD_186 unplaced-scaffold na na CAUJLS010000094.1 = NW_027664190.1 Primary Assembly 19199 na SCAFFOLD_163 unplaced-scaffold na na CAUJLS010000095.1 = NW_027664189.1 Primary Assembly 43481 na SCAFFOLD_39 unplaced-scaffold na na CAUJLS010000096.1 = NW_027664188.1 Primary Assembly 1261471 na SCAFFOLD_176 unplaced-scaffold na na CAUJLS010000097.1 = NW_027664187.1 Primary Assembly 34208 na SCAFFOLD_115 unplaced-scaffold na na CAUJLS010000098.1 = NW_027664186.1 Primary Assembly 98535 na SCAFFOLD_126 unplaced-scaffold na na CAUJLS010000099.1 = NW_027664185.1 Primary Assembly 79000 na SCAFFOLD_194 unplaced-scaffold na na CAUJLS010000100.1 = NW_027664184.1 Primary Assembly 3000 na SCAFFOLD_190 unplaced-scaffold na na CAUJLS010000101.1 = NW_027664183.1 Primary Assembly 7964 na SCAFFOLD_66 unplaced-scaffold na na CAUJLS010000102.1 = NW_027664182.1 Primary Assembly 348000 na SCAFFOLD_187 unplaced-scaffold na na CAUJLS010000103.1 = NW_027664181.1 Primary Assembly 16000 na SCAFFOLD_160 unplaced-scaffold na na CAUJLS010000104.1 = NW_027664180.1 Primary Assembly 46376 na SCAFFOLD_164 unplaced-scaffold na na CAUJLS010000105.1 = NW_027664179.1 Primary Assembly 42728 na SCAFFOLD_69 unplaced-scaffold na na CAUJLS010000106.1 = NW_027664178.1 Primary Assembly 318774 na SCAFFOLD_36 unplaced-scaffold na na CAUJLS010000107.1 = NW_027664177.1 Primary Assembly 1363932 na SCAFFOLD_109 unplaced-scaffold na na CAUJLS010000108.1 = NW_027664176.1 Primary Assembly 126000 na SCAFFOLD_193 unplaced-scaffold na na CAUJLS010000109.1 = NW_027664175.1 Primary Assembly 3000 na SCAFFOLD_98 unplaced-scaffold na na CAUJLS010000110.1 = NW_027664174.1 Primary Assembly 155000 na SCAFFOLD_177 unplaced-scaffold na na CAUJLS010000111.1 = NW_027664173.1 Primary Assembly 33881 na SCAFFOLD_127 unplaced-scaffold na na CAUJLS010000112.1 = NW_027664172.1 Primary Assembly 77272 na SCAFFOLD_77 unplaced-scaffold na na CAUJLS010000113.1 = NW_027664171.1 Primary Assembly 270000 na SCAFFOLD_72 unplaced-scaffold na na CAUJLS010000114.1 = NW_027664170.1 Primary Assembly 307574 na SCAFFOLD_114 unplaced-scaffold na na CAUJLS010000115.1 = NW_027664169.1 Primary Assembly 99722 na SCAFFOLD_110 unplaced-scaffold na na CAUJLS010000116.1 = NW_027664168.1 Primary Assembly 124131 na SCAFFOLD_195 unplaced-scaffold na na CAUJLS010000117.1 = NW_027664167.1 Primary Assembly 2000 na SCAFFOLD_171 unplaced-scaffold na na CAUJLS010000118.1 = NW_027664166.1 Primary Assembly 36649 na SCAFFOLD_31 unplaced-scaffold na na CAUJLS010000119.1 = NW_027664165.1 Primary Assembly 2195878 na SCAFFOLD_134 unplaced-scaffold na na CAUJLS010000120.1 = NW_027664164.1 Primary Assembly 69000 na SCAFFOLD_181 unplaced-scaffold na na CAUJLS010000121.1 = NW_027664163.1 Primary Assembly 28409 na SCAFFOLD_48 unplaced-scaffold na na CAUJLS010000122.1 = NW_027664162.1 Primary Assembly 799000 na SCAFFOLD_78 unplaced-scaffold na na CAUJLS010000123.1 = NW_027664161.1 Primary Assembly 264000 na SCAFFOLD_33 unplaced-scaffold na na CAUJLS010000124.1 = NW_027664160.1 Primary Assembly 1565797 na SCAFFOLD_55 unplaced-scaffold na na CAUJLS010000125.1 = NW_027664159.1 Primary Assembly 544000 na SCAFFOLD_149 unplaced-scaffold na na CAUJLS010000126.1 = NW_027664158.1 Primary Assembly 57903 na SCAFFOLD_128 unplaced-scaffold na na CAUJLS010000127.1 = NW_027664157.1 Primary Assembly 76000 na SCAFFOLD_172 unplaced-scaffold na na CAUJLS010000128.1 = NW_027664156.1 Primary Assembly 36536 na SCAFFOLD_113 unplaced-scaffold na na CAUJLS010000129.1 = NW_027664155.1 Primary Assembly 108131 na SCAFFOLD_63 unplaced-scaffold na na CAUJLS010000130.1 = NW_027664154.1 Primary Assembly 370336 na SCAFFOLD_178 unplaced-scaffold na na CAUJLS010000131.1 = NW_027664153.1 Primary Assembly 32402 na SCAFFOLD_182 unplaced-scaffold na na CAUJLS010000132.1 = NW_027664152.1 Primary Assembly 26495 na SCAFFOLD_165 unplaced-scaffold na na CAUJLS010000133.1 = NW_027664151.1 Primary Assembly 41757 na SCAFFOLD_188 unplaced-scaffold na na CAUJLS010000134.1 = NW_027664150.1 Primary Assembly 14384 na SCAFFOLD_133 unplaced-scaffold na na CAUJLS010000135.1 = NW_027664149.1 Primary Assembly 70000 na SCAFFOLD_61 unplaced-scaffold na na CAUJLS010000136.1 = NW_027664148.1 Primary Assembly 399000 na scaffold_MT_1 assembled-molecule MT Mitochondrion OY725455.1 <> na non-nuclear 18856 na