# Assembly name: fPhoPho1.1 # Organism name: Phoxinus phoxinus (Eurasian minnow) # Taxid: 58324 # BioSample: SAMEA11296539 # BioProject: PRJEB59820 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2023-02-15 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CASCJP01 # Assembly method: various # Genome coverage: 30x # Sequencing technology: PacBio,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_949152265.1 # RefSeq assembly accession: GCF_949152265.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_949152275.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_949152264.1 GCF_949152264.1 Primary Assembly ## GCA_949152266.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OX424409.1 = NC_136876.1 Primary Assembly 55893807 na SUPER_2 assembled-molecule 2 Chromosome OX424410.1 = NC_136877.1 Primary Assembly 54672455 na SUPER_3 assembled-molecule 3 Chromosome OX424411.1 = NC_136878.1 Primary Assembly 48540618 na SUPER_4 assembled-molecule 4 Chromosome OX424412.1 = NC_136879.1 Primary Assembly 45531828 na SUPER_5 assembled-molecule 5 Chromosome OX424413.1 = NC_136880.1 Primary Assembly 44815072 na SUPER_6 assembled-molecule 6 Chromosome OX424414.1 = NC_136881.1 Primary Assembly 45162367 na SUPER_7 assembled-molecule 7 Chromosome OX424415.1 = NC_136882.1 Primary Assembly 41353901 na SUPER_8 assembled-molecule 8 Chromosome OX424416.1 = NC_136883.1 Primary Assembly 38982246 na SUPER_9 assembled-molecule 9 Chromosome OX424417.1 = NC_136884.1 Primary Assembly 38554997 na SUPER_10 assembled-molecule 10 Chromosome OX424418.1 = NC_136885.1 Primary Assembly 37204025 na SUPER_11 assembled-molecule 11 Chromosome OX424419.1 = NC_136886.1 Primary Assembly 36753459 na SUPER_12 assembled-molecule 12 Chromosome OX424420.1 = NC_136887.1 Primary Assembly 36462332 na SUPER_13 assembled-molecule 13 Chromosome OX424421.1 = NC_136888.1 Primary Assembly 36146076 na SUPER_14 assembled-molecule 14 Chromosome OX424422.1 = NC_136889.1 Primary Assembly 35606265 na SUPER_15 assembled-molecule 15 Chromosome OX424423.1 = NC_136890.1 Primary Assembly 35531770 na SUPER_16 assembled-molecule 16 Chromosome OX424424.1 = NC_136891.1 Primary Assembly 34728781 na SUPER_17 assembled-molecule 17 Chromosome OX424425.1 = NC_136892.1 Primary Assembly 34381582 na SUPER_18 assembled-molecule 18 Chromosome OX424426.1 = NC_136893.1 Primary Assembly 33914783 na SUPER_19 assembled-molecule 19 Chromosome OX424427.1 = NC_136894.1 Primary Assembly 33058111 na SUPER_20 assembled-molecule 20 Chromosome OX424428.1 = NC_136895.1 Primary Assembly 32771178 na SUPER_21 assembled-molecule 21 Chromosome OX424429.1 = NC_136896.1 Primary Assembly 32316546 na SUPER_22 assembled-molecule 22 Chromosome OX424430.1 = NC_136897.1 Primary Assembly 29721935 na SUPER_23 assembled-molecule 23 Chromosome OX424431.1 = NC_136898.1 Primary Assembly 29459319 na SUPER_24 assembled-molecule 24 Chromosome OX424432.1 = NC_136899.1 Primary Assembly 27719707 na SUPER_25 assembled-molecule 25 Chromosome OX424433.1 = NC_136900.1 Primary Assembly 25938185 na SUPER_5_unloc_1 unlocalized-scaffold 5 Chromosome CASCJP010000001.1 = NW_027639432.1 Primary Assembly 392000 na scaffold_146 unplaced-scaffold na na CASCJP010000002.1 = NW_027639431.1 Primary Assembly 16087 na scaffold_81 unplaced-scaffold na na CASCJP010000003.1 = NW_027639430.1 Primary Assembly 83288 na scaffold_82 unplaced-scaffold na na CASCJP010000004.1 = NW_027639429.1 Primary Assembly 83240 na scaffold_166 unplaced-scaffold na na CASCJP010000005.1 = NW_027639428.1 Primary Assembly 1000 na scaffold_100 unplaced-scaffold na na CASCJP010000006.1 = NW_027639427.1 Primary Assembly 56216 na scaffold_91 unplaced-scaffold na na CASCJP010000007.1 = NW_027639426.1 Primary Assembly 66216 na scaffold_150 unplaced-scaffold na na CASCJP010000008.1 = NW_027639425.1 Primary Assembly 14702 na scaffold_133 unplaced-scaffold na na CASCJP010000009.1 = NW_027639424.1 Primary Assembly 25538 na scaffold_92 unplaced-scaffold na na CASCJP010000010.1 = NW_027639423.1 Primary Assembly 65937 na scaffold_66 unplaced-scaffold na na CASCJP010000011.1 = NW_027639422.1 Primary Assembly 128592 na scaffold_152 unplaced-scaffold na na CASCJP010000012.1 = NW_027639421.1 Primary Assembly 14241 na scaffold_113 unplaced-scaffold na na CASCJP010000013.1 = NW_027639420.1 Primary Assembly 41167 na scaffold_123 unplaced-scaffold na na CASCJP010000014.1 = NW_027639419.1 Primary Assembly 30491 na scaffold_101 unplaced-scaffold na na CASCJP010000015.1 = NW_027639418.1 Primary Assembly 55610 na scaffold_93 unplaced-scaffold na na CASCJP010000016.1 = NW_027639417.1 Primary Assembly 65000 na scaffold_102 unplaced-scaffold na na CASCJP010000017.1 = NW_027639416.1 Primary Assembly 55041 na scaffold_151 unplaced-scaffold na na CASCJP010000018.1 = NW_027639415.1 Primary Assembly 14425 na scaffold_83 unplaced-scaffold na na CASCJP010000019.1 = NW_027639414.1 Primary Assembly 83165 na scaffold_75 unplaced-scaffold na na CASCJP010000020.1 = NW_027639413.1 Primary Assembly 101137 na scaffold_98 unplaced-scaffold na na CASCJP010000021.1 = NW_027639412.1 Primary Assembly 59448 na scaffold_86 unplaced-scaffold na na CASCJP010000022.1 = NW_027639411.1 Primary Assembly 75065 na scaffold_126 unplaced-scaffold na na CASCJP010000023.1 = NW_027639410.1 Primary Assembly 28756 na scaffold_159 unplaced-scaffold na na CASCJP010000024.1 = NW_027639409.1 Primary Assembly 2000 na scaffold_105 unplaced-scaffold na na CASCJP010000025.1 = NW_027639408.1 Primary Assembly 49871 na scaffold_107 unplaced-scaffold na na CASCJP010000026.1 = NW_027639407.1 Primary Assembly 49226 na scaffold_84 unplaced-scaffold na na CASCJP010000027.1 = NW_027639406.1 Primary Assembly 80235 na scaffold_109 unplaced-scaffold na na CASCJP010000028.1 = NW_027639405.1 Primary Assembly 48902 na scaffold_96 unplaced-scaffold na na CASCJP010000029.1 = NW_027639404.1 Primary Assembly 62000 na scaffold_77 unplaced-scaffold na na CASCJP010000030.1 = NW_027639403.1 Primary Assembly 93901 na scaffold_88 unplaced-scaffold na na CASCJP010000031.1 = NW_027639402.1 Primary Assembly 71059 na scaffold_94 unplaced-scaffold na na CASCJP010000032.1 = NW_027639401.1 Primary Assembly 63617 na scaffold_157 unplaced-scaffold na na CASCJP010000033.1 = NW_027639400.1 Primary Assembly 3000 na scaffold_155 unplaced-scaffold na na CASCJP010000034.1 = NW_027639399.1 Primary Assembly 9994 na scaffold_79 unplaced-scaffold na na CASCJP010000035.1 = NW_027639398.1 Primary Assembly 86991 na scaffold_61 unplaced-scaffold na na CASCJP010000036.1 = NW_027639397.1 Primary Assembly 151330 na scaffold_163 unplaced-scaffold na na CASCJP010000037.1 = NW_027639396.1 Primary Assembly 1000 na scaffold_154 unplaced-scaffold na na CASCJP010000038.1 = NW_027639395.1 Primary Assembly 10778 na scaffold_143 unplaced-scaffold na na CASCJP010000039.1 = NW_027639394.1 Primary Assembly 17542 na scaffold_108 unplaced-scaffold na na CASCJP010000040.1 = NW_027639393.1 Primary Assembly 49079 na scaffold_136 unplaced-scaffold na na CASCJP010000041.1 = NW_027639392.1 Primary Assembly 21961 na scaffold_158 unplaced-scaffold na na CASCJP010000042.1 = NW_027639391.1 Primary Assembly 2000 na scaffold_104 unplaced-scaffold na na CASCJP010000043.1 = NW_027639390.1 Primary Assembly 51311 na scaffold_140 unplaced-scaffold na na CASCJP010000044.1 = NW_027639389.1 Primary Assembly 20083 na scaffold_127 unplaced-scaffold na na CASCJP010000045.1 = NW_027639388.1 Primary Assembly 27791 na scaffold_125 unplaced-scaffold na na CASCJP010000046.1 = NW_027639387.1 Primary Assembly 28758 na scaffold_134 unplaced-scaffold na na CASCJP010000047.1 = NW_027639386.1 Primary Assembly 24820 na scaffold_160 unplaced-scaffold na na CASCJP010000048.1 = NW_027639385.1 Primary Assembly 2000 na scaffold_106 unplaced-scaffold na na CASCJP010000049.1 = NW_027639384.1 Primary Assembly 49625 na scaffold_115 unplaced-scaffold na na CASCJP010000050.1 = NW_027639383.1 Primary Assembly 38654 na scaffold_117 unplaced-scaffold na na CASCJP010000051.1 = NW_027639382.1 Primary Assembly 35396 na scaffold_119 unplaced-scaffold na na CASCJP010000052.1 = NW_027639381.1 Primary Assembly 33071 na scaffold_138 unplaced-scaffold na na CASCJP010000053.1 = NW_027639380.1 Primary Assembly 21106 na scaffold_129 unplaced-scaffold na na CASCJP010000054.1 = NW_027639379.1 Primary Assembly 27048 na scaffold_156 unplaced-scaffold na na CASCJP010000055.1 = NW_027639378.1 Primary Assembly 4000 na scaffold_55 unplaced-scaffold na na CASCJP010000056.1 = NW_027639377.1 Primary Assembly 204179 na scaffold_141 unplaced-scaffold na na CASCJP010000057.1 = NW_027639376.1 Primary Assembly 18607 na scaffold_99 unplaced-scaffold na na CASCJP010000058.1 = NW_027639375.1 Primary Assembly 57890 na scaffold_60 unplaced-scaffold na na CASCJP010000059.1 = NW_027639374.1 Primary Assembly 158229 na scaffold_128 unplaced-scaffold na na CASCJP010000060.1 = NW_027639373.1 Primary Assembly 27624 na scaffold_118 unplaced-scaffold na na CASCJP010000061.1 = NW_027639372.1 Primary Assembly 34845 na scaffold_139 unplaced-scaffold na na CASCJP010000062.1 = NW_027639371.1 Primary Assembly 20487 na scaffold_161 unplaced-scaffold na na CASCJP010000063.1 = NW_027639370.1 Primary Assembly 2000 na scaffold_97 unplaced-scaffold na na CASCJP010000064.1 = NW_027639369.1 Primary Assembly 59795 na scaffold_135 unplaced-scaffold na na CASCJP010000065.1 = NW_027639368.1 Primary Assembly 22672 na scaffold_137 unplaced-scaffold na na CASCJP010000066.1 = NW_027639367.1 Primary Assembly 21753 na scaffold_50 unplaced-scaffold na na CASCJP010000067.1 = NW_027639366.1 Primary Assembly 227503 na scaffold_89 unplaced-scaffold na na CASCJP010000068.1 = NW_027639365.1 Primary Assembly 69894 na scaffold_124 unplaced-scaffold na na CASCJP010000069.1 = NW_027639364.1 Primary Assembly 30364 na scaffold_162 unplaced-scaffold na na CASCJP010000070.1 = NW_027639363.1 Primary Assembly 1000 na scaffold_87 unplaced-scaffold na na CASCJP010000071.1 = NW_027639362.1 Primary Assembly 73084 na scaffold_114 unplaced-scaffold na na CASCJP010000072.1 = NW_027639361.1 Primary Assembly 39185 na scaffold_78 unplaced-scaffold na na CASCJP010000073.1 = NW_027639360.1 Primary Assembly 92101 na scaffold_142 unplaced-scaffold na na CASCJP010000074.1 = NW_027639359.1 Primary Assembly 17887 na scaffold_95 unplaced-scaffold na na CASCJP010000075.1 = NW_027639358.1 Primary Assembly 62906 na scaffold_80 unplaced-scaffold na na CASCJP010000076.1 = NW_027639357.1 Primary Assembly 85169 na scaffold_120 unplaced-scaffold na na CASCJP010000077.1 = NW_027639356.1 Primary Assembly 31894 na scaffold_145 unplaced-scaffold na na CASCJP010000078.1 = NW_027639355.1 Primary Assembly 16655 na scaffold_147 unplaced-scaffold na na CASCJP010000079.1 = NW_027639354.1 Primary Assembly 15200 na scaffold_132 unplaced-scaffold na na CASCJP010000080.1 = NW_027639353.1 Primary Assembly 26148 na scaffold_110 unplaced-scaffold na na CASCJP010000081.1 = NW_027639352.1 Primary Assembly 48233 na scaffold_165 unplaced-scaffold na na CASCJP010000082.1 = NW_027639351.1 Primary Assembly 1000 na scaffold_167 unplaced-scaffold na na CASCJP010000083.1 = NW_027639350.1 Primary Assembly 1000 na scaffold_90 unplaced-scaffold na na CASCJP010000084.1 = NW_027639349.1 Primary Assembly 66428 na scaffold_131 unplaced-scaffold na na CASCJP010000085.1 = NW_027639348.1 Primary Assembly 26509 na scaffold_85 unplaced-scaffold na na CASCJP010000086.1 = NW_027639347.1 Primary Assembly 75000 na scaffold_149 unplaced-scaffold na na CASCJP010000087.1 = NW_027639346.1 Primary Assembly 14821 na scaffold_148 unplaced-scaffold na na CASCJP010000088.1 = NW_027639345.1 Primary Assembly 15141 na scaffold_103 unplaced-scaffold na na CASCJP010000089.1 = NW_027639344.1 Primary Assembly 52757 na scaffold_121 unplaced-scaffold na na CASCJP010000090.1 = NW_027639343.1 Primary Assembly 30610 na scaffold_111 unplaced-scaffold na na CASCJP010000091.1 = NW_027639342.1 Primary Assembly 43507 na scaffold_48 unplaced-scaffold na na CASCJP010000092.1 = NW_027639341.1 Primary Assembly 253453 na scaffold_144 unplaced-scaffold na na CASCJP010000093.1 = NW_027639340.1 Primary Assembly 16796 na scaffold_153 unplaced-scaffold na na CASCJP010000094.1 = NW_027639339.1 Primary Assembly 11564 na scaffold_130 unplaced-scaffold na na CASCJP010000095.1 = NW_027639338.1 Primary Assembly 26955 na scaffold_112 unplaced-scaffold na na CASCJP010000096.1 = NW_027639337.1 Primary Assembly 41619 na scaffold_164 unplaced-scaffold na na CASCJP010000097.1 = NW_027639336.1 Primary Assembly 1000 na scaffold_122 unplaced-scaffold na na CASCJP010000098.1 = NW_027639335.1 Primary Assembly 30495 na scaffold_46 unplaced-scaffold na na CASCJP010000099.1 = NW_027639334.1 Primary Assembly 289879 na scaffold_MT_1 assembled-molecule MT Mitochondrion OX424434.1 <> na non-nuclear 18362 na