# Assembly name: ASM5403529v1 # Organism name: Methanocaldococcus sp. (euryarchaeotes) # Isolate: 4279-1-1-88_bin.41 # Taxid: 2152917 # BioSample: SAMN49582308 # BioProject: PRJNA1244896 # Submitter: Portland State University # Date: 2025-12-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBPPGH01 # Assembly method: MEGAHIT v. 1.2.9 # Expected final version: Yes # Genome coverage: 17.9x # Sequencing technology: Illumina NextSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_054035295.1 # RefSeq assembly accession: GCF_054035295.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054035305.1 GCF_054035305.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name lcl_k127_291959 unplaced-scaffold na na JBPPGH010000001.1 = NZ_JBPPGH010000001.1 Primary Assembly 47667 na lcl_k127_219967 unplaced-scaffold na na JBPPGH010000002.1 = NZ_JBPPGH010000002.1 Primary Assembly 33030 na lcl_k127_220013 unplaced-scaffold na na JBPPGH010000003.1 = NZ_JBPPGH010000003.1 Primary Assembly 3279 na lcl_k127_74499 unplaced-scaffold na na JBPPGH010000004.1 = NZ_JBPPGH010000004.1 Primary Assembly 19457 na lcl_k127_110642 unplaced-scaffold na na JBPPGH010000005.1 = NZ_JBPPGH010000005.1 Primary Assembly 84123 na lcl_k127_365265 unplaced-scaffold na na JBPPGH010000006.1 = NZ_JBPPGH010000006.1 Primary Assembly 57328 na lcl_k127_256332 unplaced-scaffold na na JBPPGH010000007.1 = NZ_JBPPGH010000007.1 Primary Assembly 26932 na lcl_k127_292879 unplaced-scaffold na na JBPPGH010000008.1 = NZ_JBPPGH010000008.1 Primary Assembly 51346 na lcl_k127_366331 unplaced-scaffold na na JBPPGH010000009.1 = NZ_JBPPGH010000009.1 Primary Assembly 44659 na lcl_k127_221553 unplaced-scaffold na na JBPPGH010000010.1 = NZ_JBPPGH010000010.1 Primary Assembly 8751 na lcl_k127_513058 unplaced-scaffold na na JBPPGH010000011.1 = NZ_JBPPGH010000011.1 Primary Assembly 2884 na lcl_k127_331222 unplaced-scaffold na na JBPPGH010000012.1 = NZ_JBPPGH010000012.1 Primary Assembly 6148 na lcl_k127_223046 unplaced-scaffold na na JBPPGH010000013.1 = NZ_JBPPGH010000013.1 Primary Assembly 27096 na lcl_k127_223214 unplaced-scaffold na na JBPPGH010000014.1 = NZ_JBPPGH010000014.1 Primary Assembly 41180 na lcl_k127_223259 unplaced-scaffold na na JBPPGH010000015.1 = NZ_JBPPGH010000015.1 Primary Assembly 3860 na lcl_k127_477066 unplaced-scaffold na na JBPPGH010000016.1 = NZ_JBPPGH010000016.1 Primary Assembly 18891 na lcl_k127_405024 unplaced-scaffold na na JBPPGH010000017.1 = NZ_JBPPGH010000017.1 Primary Assembly 6503 na lcl_k127_260278 unplaced-scaffold na na JBPPGH010000018.1 = NZ_JBPPGH010000018.1 Primary Assembly 6299 na lcl_k127_333325 unplaced-scaffold na na JBPPGH010000019.1 = NZ_JBPPGH010000019.1 Primary Assembly 59468 na lcl_k127_152941 unplaced-scaffold na na JBPPGH010000020.1 = NZ_JBPPGH010000020.1 Primary Assembly 4360 na lcl_k127_517786 unplaced-scaffold na na JBPPGH010000021.1 = NZ_JBPPGH010000021.1 Primary Assembly 29692 na lcl_k127_44680 unplaced-scaffold na na JBPPGH010000022.1 = NZ_JBPPGH010000022.1 Primary Assembly 2556 na lcl_k127_261912 unplaced-scaffold na na JBPPGH010000023.1 = NZ_JBPPGH010000023.1 Primary Assembly 27799 na lcl_k127_374423 unplaced-scaffold na na JBPPGH010000024.1 = NZ_JBPPGH010000024.1 Primary Assembly 25306 na lcl_k127_481912 unplaced-scaffold na na JBPPGH010000025.1 = NZ_JBPPGH010000025.1 Primary Assembly 4323 na lcl_k127_229423 unplaced-scaffold na na JBPPGH010000026.1 = NZ_JBPPGH010000026.1 Primary Assembly 19883 na lcl_k127_121566 unplaced-scaffold na na JBPPGH010000027.1 = NZ_JBPPGH010000027.1 Primary Assembly 3072 na lcl_k127_86524 unplaced-scaffold na na JBPPGH010000028.1 = NZ_JBPPGH010000028.1 Primary Assembly 28461 na lcl_k127_302811 unplaced-scaffold na na JBPPGH010000029.1 = NZ_JBPPGH010000029.1 Primary Assembly 2896 na lcl_k127_451420 unplaced-scaffold na na JBPPGH010000030.1 = NZ_JBPPGH010000030.1 Primary Assembly 55152 na lcl_k127_267183 unplaced-scaffold na na JBPPGH010000031.1 = NZ_JBPPGH010000031.1 Primary Assembly 8992 na lcl_k127_267272 unplaced-scaffold na na JBPPGH010000032.1 = NZ_JBPPGH010000032.1 Primary Assembly 17563 na lcl_k127_267683 unplaced-scaffold na na JBPPGH010000033.1 = NZ_JBPPGH010000033.1 Primary Assembly 6670 na lcl_k127_526036 unplaced-scaffold na na JBPPGH010000034.1 = NZ_JBPPGH010000034.1 Primary Assembly 19843 na lcl_k127_453040 unplaced-scaffold na na JBPPGH010000035.1 = NZ_JBPPGH010000035.1 Primary Assembly 26717 na lcl_k127_198118 unplaced-scaffold na na JBPPGH010000036.1 = NZ_JBPPGH010000036.1 Primary Assembly 18749 na lcl_k127_198998 unplaced-scaffold na na JBPPGH010000037.1 = NZ_JBPPGH010000037.1 Primary Assembly 15420 na lcl_k127_199113 unplaced-scaffold na na JBPPGH010000038.1 = NZ_JBPPGH010000038.1 Primary Assembly 9825 na lcl_k127_383635 unplaced-scaffold na na JBPPGH010000039.1 = NZ_JBPPGH010000039.1 Primary Assembly 74435 na lcl_k127_271113 unplaced-scaffold na na JBPPGH010000040.1 = NZ_JBPPGH010000040.1 Primary Assembly 26962 na lcl_k127_490179 unplaced-scaffold na na JBPPGH010000041.1 = NZ_JBPPGH010000041.1 Primary Assembly 11731 na lcl_k127_385431 unplaced-scaffold na na JBPPGH010000042.1 = NZ_JBPPGH010000042.1 Primary Assembly 2370 na lcl_k127_490572 unplaced-scaffold na na JBPPGH010000043.1 = NZ_JBPPGH010000043.1 Primary Assembly 28452 na lcl_k127_491122 unplaced-scaffold na na JBPPGH010000044.1 = NZ_JBPPGH010000044.1 Primary Assembly 16213 na lcl_k127_346315 unplaced-scaffold na na JBPPGH010000045.1 = NZ_JBPPGH010000045.1 Primary Assembly 2385 na lcl_k127_273524 unplaced-scaffold na na JBPPGH010000046.1 = NZ_JBPPGH010000046.1 Primary Assembly 14093 na lcl_k127_491639 unplaced-scaffold na na JBPPGH010000047.1 = NZ_JBPPGH010000047.1 Primary Assembly 20092 na lcl_k127_388679 unplaced-scaffold na na JBPPGH010000048.1 = NZ_JBPPGH010000048.1 Primary Assembly 4703 na lcl_k127_242277 unplaced-scaffold na na JBPPGH010000049.1 = NZ_JBPPGH010000049.1 Primary Assembly 9404 na lcl_k127_391122 unplaced-scaffold na na JBPPGH010000050.1 = NZ_JBPPGH010000050.1 Primary Assembly 3344 na lcl_k127_425210 unplaced-scaffold na na JBPPGH010000051.1 = NZ_JBPPGH010000051.1 Primary Assembly 31763 na lcl_k127_171452 unplaced-scaffold na na JBPPGH010000052.1 = NZ_JBPPGH010000052.1 Primary Assembly 11040 na lcl_k127_135901 unplaced-scaffold na na JBPPGH010000053.1 = NZ_JBPPGH010000053.1 Primary Assembly 6243 na lcl_k127_136077 unplaced-scaffold na na JBPPGH010000054.1 = NZ_JBPPGH010000054.1 Primary Assembly 22196 na lcl_k127_99625 unplaced-scaffold na na JBPPGH010000055.1 = NZ_JBPPGH010000055.1 Primary Assembly 3016 na lcl_k127_100336 unplaced-scaffold na na JBPPGH010000056.1 = NZ_JBPPGH010000056.1 Primary Assembly 2094 na lcl_k127_427098 unplaced-scaffold na na JBPPGH010000057.1 = NZ_JBPPGH010000057.1 Primary Assembly 3517 na lcl_k127_101372 unplaced-scaffold na na JBPPGH010000058.1 = NZ_JBPPGH010000058.1 Primary Assembly 16192 na lcl_k127_352566 unplaced-scaffold na na JBPPGH010000059.1 = NZ_JBPPGH010000059.1 Primary Assembly 4423 na lcl_k127_394725 unplaced-scaffold na na JBPPGH010000060.1 = NZ_JBPPGH010000060.1 Primary Assembly 43323 na lcl_k127_466419 unplaced-scaffold na na JBPPGH010000061.1 = NZ_JBPPGH010000061.1 Primary Assembly 22793 na lcl_k127_138949 unplaced-scaffold na na JBPPGH010000062.1 = NZ_JBPPGH010000062.1 Primary Assembly 16097 na lcl_k127_353183 unplaced-scaffold na na JBPPGH010000063.1 = NZ_JBPPGH010000063.1 Primary Assembly 36771 na lcl_k127_139063 unplaced-scaffold na na JBPPGH010000064.1 = NZ_JBPPGH010000064.1 Primary Assembly 9368 na lcl_k127_139452 unplaced-scaffold na na JBPPGH010000065.1 = NZ_JBPPGH010000065.1 Primary Assembly 6723 na lcl_k127_139888 unplaced-scaffold na na JBPPGH010000066.1 = NZ_JBPPGH010000066.1 Primary Assembly 4761 na lcl_k127_250278 unplaced-scaffold na na JBPPGH010000067.1 = NZ_JBPPGH010000067.1 Primary Assembly 6176 na lcl_k127_544102 unplaced-scaffold na na JBPPGH010000068.1 = NZ_JBPPGH010000068.1 Primary Assembly 11490 na lcl_k127_319253 unplaced-scaffold na na JBPPGH010000069.1 = NZ_JBPPGH010000069.1 Primary Assembly 22556 na lcl_k127_69101 unplaced-scaffold na na JBPPGH010000070.1 = NZ_JBPPGH010000070.1 Primary Assembly 20793 na lcl_k127_106857 unplaced-scaffold na na JBPPGH010000071.1 = NZ_JBPPGH010000071.1 Primary Assembly 26981 na lcl_k127_213897 unplaced-scaffold na na JBPPGH010000072.1 = NZ_JBPPGH010000072.1 Primary Assembly 14097 na lcl_k127_472211 unplaced-scaffold na na JBPPGH010000073.1 = NZ_JBPPGH010000073.1 Primary Assembly 26368 na lcl_k127_359866 unplaced-scaffold na na JBPPGH010000074.1 = NZ_JBPPGH010000074.1 Primary Assembly 23572 na lcl_k127_287375 unplaced-scaffold na na JBPPGH010000075.1 = NZ_JBPPGH010000075.1 Primary Assembly 12352 na lcl_k127_288740 unplaced-scaffold na na JBPPGH010000076.1 = NZ_JBPPGH010000076.1 Primary Assembly 23528 na