# Assembly name: ASM5119501v1 # Organism name: Halococcus sp. AFM35 (euryarchaeotes) # Infraspecific name: strain=AFM35 # Taxid: 3421653 # BioSample: SAMN48402341 # BioProject: PRJNA1260714 # Submitter: Jiangsu University # Date: 2025-07-02 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JBNTJU01 # Assembly method: SOAPdenovo v. 2.04 # Expected final version: yes # Genome coverage: 162.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_051195015.1 # RefSeq assembly accession: GCF_051195015.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_051195025.1 GCF_051195025.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name AFM35_scaffold1 unplaced-scaffold na na JBNTJU010000001.1 = NZ_JBNTJU010000001.1 Primary Assembly 288951 na AFM35_scaffold2 unplaced-scaffold na na JBNTJU010000002.1 = NZ_JBNTJU010000002.1 Primary Assembly 229644 na AFM35_scaffold3 unplaced-scaffold na na JBNTJU010000003.1 = NZ_JBNTJU010000003.1 Primary Assembly 228351 na AFM35_scaffold4 unplaced-scaffold na na JBNTJU010000004.1 = NZ_JBNTJU010000004.1 Primary Assembly 220727 na AFM35_scaffold5 unplaced-scaffold na na JBNTJU010000005.1 = NZ_JBNTJU010000005.1 Primary Assembly 200424 na AFM35_scaffold6 unplaced-scaffold na na JBNTJU010000006.1 = NZ_JBNTJU010000006.1 Primary Assembly 183311 na AFM35_scaffold7 unplaced-scaffold na na JBNTJU010000007.1 = NZ_JBNTJU010000007.1 Primary Assembly 154506 na AFM35_scaffold8 unplaced-scaffold na na JBNTJU010000008.1 = NZ_JBNTJU010000008.1 Primary Assembly 137624 na AFM35_scaffold9 unplaced-scaffold na na JBNTJU010000009.1 = NZ_JBNTJU010000009.1 Primary Assembly 126829 na AFM35_scaffold10 unplaced-scaffold na na JBNTJU010000010.1 = NZ_JBNTJU010000010.1 Primary Assembly 113458 na AFM35_scaffold11 unplaced-scaffold na na JBNTJU010000011.1 = NZ_JBNTJU010000011.1 Primary Assembly 99733 na AFM35_scaffold12 unplaced-scaffold na na JBNTJU010000012.1 = NZ_JBNTJU010000012.1 Primary Assembly 97085 na AFM35_scaffold13 unplaced-scaffold na na JBNTJU010000013.1 = NZ_JBNTJU010000013.1 Primary Assembly 89992 na AFM35_scaffold14 unplaced-scaffold na na JBNTJU010000014.1 = NZ_JBNTJU010000014.1 Primary Assembly 87191 na AFM35_scaffold15 unplaced-scaffold na na JBNTJU010000015.1 = NZ_JBNTJU010000015.1 Primary Assembly 78225 na AFM35_scaffold16 unplaced-scaffold na na JBNTJU010000016.1 = NZ_JBNTJU010000016.1 Primary Assembly 63755 na AFM35_scaffold17 unplaced-scaffold na na JBNTJU010000017.1 = NZ_JBNTJU010000017.1 Primary Assembly 55830 na AFM35_scaffold18 unplaced-scaffold na na JBNTJU010000018.1 = NZ_JBNTJU010000018.1 Primary Assembly 51458 na AFM35_scaffold19 unplaced-scaffold na na JBNTJU010000019.1 = NZ_JBNTJU010000019.1 Primary Assembly 50728 na AFM35_scaffold20 unplaced-scaffold na na JBNTJU010000020.1 = NZ_JBNTJU010000020.1 Primary Assembly 50394 na AFM35_scaffold21 unplaced-scaffold na na JBNTJU010000021.1 = NZ_JBNTJU010000021.1 Primary Assembly 48962 na AFM35_scaffold22 unplaced-scaffold na na JBNTJU010000022.1 = NZ_JBNTJU010000022.1 Primary Assembly 46578 na AFM35_scaffold23 unplaced-scaffold na na JBNTJU010000023.1 = NZ_JBNTJU010000023.1 Primary Assembly 44820 na AFM35_scaffold24 unplaced-scaffold na na JBNTJU010000024.1 = NZ_JBNTJU010000024.1 Primary Assembly 42587 na AFM35_scaffold25 unplaced-scaffold na na JBNTJU010000025.1 = NZ_JBNTJU010000025.1 Primary Assembly 42060 na AFM35_scaffold26 unplaced-scaffold na na JBNTJU010000026.1 = NZ_JBNTJU010000026.1 Primary Assembly 39276 na AFM35_scaffold27 unplaced-scaffold na na JBNTJU010000027.1 = NZ_JBNTJU010000027.1 Primary Assembly 37923 na AFM35_scaffold28 unplaced-scaffold na na JBNTJU010000028.1 = NZ_JBNTJU010000028.1 Primary Assembly 30867 na AFM35_scaffold29 unplaced-scaffold na na JBNTJU010000029.1 = NZ_JBNTJU010000029.1 Primary Assembly 30706 na AFM35_scaffold30 unplaced-scaffold na na JBNTJU010000030.1 = NZ_JBNTJU010000030.1 Primary Assembly 28540 na AFM35_scaffold31 unplaced-scaffold na na JBNTJU010000031.1 = NZ_JBNTJU010000031.1 Primary Assembly 24925 na AFM35_scaffold32 unplaced-scaffold na na JBNTJU010000032.1 = NZ_JBNTJU010000032.1 Primary Assembly 24118 na AFM35_scaffold33 unplaced-scaffold na na JBNTJU010000033.1 = NZ_JBNTJU010000033.1 Primary Assembly 23489 na AFM35_scaffold34 unplaced-scaffold na na JBNTJU010000034.1 = NZ_JBNTJU010000034.1 Primary Assembly 20857 na AFM35_scaffold35 unplaced-scaffold na na JBNTJU010000035.1 = NZ_JBNTJU010000035.1 Primary Assembly 19620 na AFM35_scaffold36 unplaced-scaffold na na JBNTJU010000036.1 = NZ_JBNTJU010000036.1 Primary Assembly 19039 na AFM35_scaffold37 unplaced-scaffold na na JBNTJU010000037.1 = NZ_JBNTJU010000037.1 Primary Assembly 18263 na AFM35_scaffold38 unplaced-scaffold na na JBNTJU010000038.1 = NZ_JBNTJU010000038.1 Primary Assembly 16998 na AFM35_scaffold39 unplaced-scaffold na na JBNTJU010000039.1 = NZ_JBNTJU010000039.1 Primary Assembly 16980 na AFM35_scaffold40 unplaced-scaffold na na JBNTJU010000040.1 = NZ_JBNTJU010000040.1 Primary Assembly 16742 na AFM35_scaffold41 unplaced-scaffold na na JBNTJU010000041.1 = NZ_JBNTJU010000041.1 Primary Assembly 15559 na AFM35_scaffold42 unplaced-scaffold na na JBNTJU010000042.1 = NZ_JBNTJU010000042.1 Primary Assembly 14952 na AFM35_scaffold43 unplaced-scaffold na na JBNTJU010000043.1 = NZ_JBNTJU010000043.1 Primary Assembly 14525 na AFM35_scaffold44 unplaced-scaffold na na JBNTJU010000044.1 = NZ_JBNTJU010000044.1 Primary Assembly 14443 na AFM35_scaffold45 unplaced-scaffold na na JBNTJU010000045.1 = NZ_JBNTJU010000045.1 Primary Assembly 13763 na AFM35_scaffold46 unplaced-scaffold na na JBNTJU010000046.1 = NZ_JBNTJU010000046.1 Primary Assembly 12894 na AFM35_scaffold47 unplaced-scaffold na na JBNTJU010000047.1 = NZ_JBNTJU010000047.1 Primary Assembly 12140 na AFM35_scaffold48 unplaced-scaffold na na JBNTJU010000048.1 = NZ_JBNTJU010000048.1 Primary Assembly 11426 na AFM35_scaffold49 unplaced-scaffold na na JBNTJU010000049.1 = NZ_JBNTJU010000049.1 Primary Assembly 9458 na AFM35_scaffold50 unplaced-scaffold na na JBNTJU010000050.1 = NZ_JBNTJU010000050.1 Primary Assembly 9207 na AFM35_scaffold51 unplaced-scaffold na na JBNTJU010000051.1 = NZ_JBNTJU010000051.1 Primary Assembly 9066 na AFM35_scaffold52 unplaced-scaffold na na JBNTJU010000052.1 = NZ_JBNTJU010000052.1 Primary Assembly 8983 na AFM35_scaffold53 unplaced-scaffold na na JBNTJU010000053.1 = NZ_JBNTJU010000053.1 Primary Assembly 8610 na AFM35_scaffold54 unplaced-scaffold na na JBNTJU010000054.1 = NZ_JBNTJU010000054.1 Primary Assembly 8556 na AFM35_scaffold55 unplaced-scaffold na na JBNTJU010000055.1 = NZ_JBNTJU010000055.1 Primary Assembly 8281 na AFM35_scaffold56 unplaced-scaffold na na JBNTJU010000056.1 = NZ_JBNTJU010000056.1 Primary Assembly 8016 na AFM35_scaffold57 unplaced-scaffold na na JBNTJU010000057.1 = NZ_JBNTJU010000057.1 Primary Assembly 7456 na AFM35_scaffold58 unplaced-scaffold na na JBNTJU010000058.1 = NZ_JBNTJU010000058.1 Primary Assembly 7245 na AFM35_scaffold59 unplaced-scaffold na na JBNTJU010000059.1 = NZ_JBNTJU010000059.1 Primary Assembly 7111 na AFM35_scaffold60 unplaced-scaffold na na JBNTJU010000060.1 = NZ_JBNTJU010000060.1 Primary Assembly 7068 na AFM35_scaffold61 unplaced-scaffold na na JBNTJU010000061.1 = NZ_JBNTJU010000061.1 Primary Assembly 6875 na AFM35_scaffold62 unplaced-scaffold na na JBNTJU010000062.1 = NZ_JBNTJU010000062.1 Primary Assembly 6520 na AFM35_scaffold63 unplaced-scaffold na na JBNTJU010000063.1 = NZ_JBNTJU010000063.1 Primary Assembly 6499 na AFM35_scaffold64 unplaced-scaffold na na JBNTJU010000064.1 = NZ_JBNTJU010000064.1 Primary Assembly 6322 na AFM35_scaffold65 unplaced-scaffold na na JBNTJU010000065.1 = NZ_JBNTJU010000065.1 Primary Assembly 4924 na AFM35_scaffold66 unplaced-scaffold na na JBNTJU010000066.1 = NZ_JBNTJU010000066.1 Primary Assembly 4346 na AFM35_scaffold67 unplaced-scaffold na na JBNTJU010000067.1 = NZ_JBNTJU010000067.1 Primary Assembly 4224 na AFM35_scaffold68 unplaced-scaffold na na JBNTJU010000068.1 = NZ_JBNTJU010000068.1 Primary Assembly 3788 na AFM35_scaffold69 unplaced-scaffold na na JBNTJU010000069.1 = NZ_JBNTJU010000069.1 Primary Assembly 3282 na AFM35_scaffold70 unplaced-scaffold na na JBNTJU010000070.1 = NZ_JBNTJU010000070.1 Primary Assembly 3137 na AFM35_scaffold71 unplaced-scaffold na na JBNTJU010000071.1 = NZ_JBNTJU010000071.1 Primary Assembly 3093 na AFM35_scaffold72 unplaced-scaffold na na JBNTJU010000072.1 = NZ_JBNTJU010000072.1 Primary Assembly 3033 na AFM35_scaffold73 unplaced-scaffold na na JBNTJU010000073.1 = NZ_JBNTJU010000073.1 Primary Assembly 2959 na AFM35_scaffold74 unplaced-scaffold na na JBNTJU010000074.1 = NZ_JBNTJU010000074.1 Primary Assembly 2833 na AFM35_scaffold75 unplaced-scaffold na na JBNTJU010000075.1 = NZ_JBNTJU010000075.1 Primary Assembly 2424 na AFM35_scaffold76 unplaced-scaffold na na JBNTJU010000076.1 = NZ_JBNTJU010000076.1 Primary Assembly 2407 na AFM35_scaffold77 unplaced-scaffold na na JBNTJU010000077.1 = NZ_JBNTJU010000077.1 Primary Assembly 2196 na AFM35_scaffold78 unplaced-scaffold na na JBNTJU010000078.1 = NZ_JBNTJU010000078.1 Primary Assembly 1980 na AFM35_scaffold79 unplaced-scaffold na na JBNTJU010000079.1 = NZ_JBNTJU010000079.1 Primary Assembly 1942 na AFM35_scaffold80 unplaced-scaffold na na JBNTJU010000080.1 = NZ_JBNTJU010000080.1 Primary Assembly 1680 na AFM35_scaffold81 unplaced-scaffold na na JBNTJU010000081.1 = NZ_JBNTJU010000081.1 Primary Assembly 1564 na AFM35_scaffold82 unplaced-scaffold na na JBNTJU010000082.1 = NZ_JBNTJU010000082.1 Primary Assembly 1551 na AFM35_scaffold83 unplaced-scaffold na na JBNTJU010000083.1 = NZ_JBNTJU010000083.1 Primary Assembly 1509 na AFM35_scaffold84 unplaced-scaffold na na JBNTJU010000084.1 = NZ_JBNTJU010000084.1 Primary Assembly 1506 na AFM35_scaffold85 unplaced-scaffold na na JBNTJU010000085.1 = NZ_JBNTJU010000085.1 Primary Assembly 1506 na AFM35_scaffold86 unplaced-scaffold na na JBNTJU010000086.1 = NZ_JBNTJU010000086.1 Primary Assembly 1473 na AFM35_scaffold87 unplaced-scaffold na na JBNTJU010000087.1 = NZ_JBNTJU010000087.1 Primary Assembly 1456 na AFM35_scaffold88 unplaced-scaffold na na JBNTJU010000088.1 = NZ_JBNTJU010000088.1 Primary Assembly 1439 na AFM35_scaffold89 unplaced-scaffold na na JBNTJU010000089.1 = NZ_JBNTJU010000089.1 Primary Assembly 1420 na AFM35_scaffold90 unplaced-scaffold na na JBNTJU010000090.1 = NZ_JBNTJU010000090.1 Primary Assembly 1408 na AFM35_scaffold91 unplaced-scaffold na na JBNTJU010000091.1 = NZ_JBNTJU010000091.1 Primary Assembly 1401 na AFM35_scaffold92 unplaced-scaffold na na JBNTJU010000092.1 = NZ_JBNTJU010000092.1 Primary Assembly 1395 na AFM35_scaffold93 unplaced-scaffold na na JBNTJU010000093.1 = NZ_JBNTJU010000093.1 Primary Assembly 1379 na AFM35_scaffold94 unplaced-scaffold na na JBNTJU010000094.1 = NZ_JBNTJU010000094.1 Primary Assembly 1364 na AFM35_scaffold95 unplaced-scaffold na na JBNTJU010000095.1 = NZ_JBNTJU010000095.1 Primary Assembly 1289 na AFM35_scaffold96 unplaced-scaffold na na JBNTJU010000096.1 = NZ_JBNTJU010000096.1 Primary Assembly 1130 na AFM35_scaffold97 unplaced-scaffold na na JBNTJU010000097.1 = NZ_JBNTJU010000097.1 Primary Assembly 1093 na AFM35_scaffold98 unplaced-scaffold na na JBNTJU010000098.1 = NZ_JBNTJU010000098.1 Primary Assembly 1074 na AFM35_scaffold99 unplaced-scaffold na na JBNTJU010000099.1 = NZ_JBNTJU010000099.1 Primary Assembly 1039 na AFM35_scaffold100 unplaced-scaffold na na JBNTJU010000100.1 = NZ_JBNTJU010000100.1 Primary Assembly 991 na AFM35_scaffold101 unplaced-scaffold na na JBNTJU010000101.1 = NZ_JBNTJU010000101.1 Primary Assembly 991 na AFM35_scaffold102 unplaced-scaffold na na JBNTJU010000102.1 = NZ_JBNTJU010000102.1 Primary Assembly 940 na AFM35_scaffold103 unplaced-scaffold na na JBNTJU010000103.1 = NZ_JBNTJU010000103.1 Primary Assembly 933 na AFM35_scaffold104 unplaced-scaffold na na JBNTJU010000104.1 = NZ_JBNTJU010000104.1 Primary Assembly 845 na AFM35_scaffold105 unplaced-scaffold na na JBNTJU010000105.1 = NZ_JBNTJU010000105.1 Primary Assembly 737 na AFM35_scaffold106 unplaced-scaffold na na JBNTJU010000106.1 = NZ_JBNTJU010000106.1 Primary Assembly 695 na AFM35_scaffold107 unplaced-scaffold na na JBNTJU010000107.1 = NZ_JBNTJU010000107.1 Primary Assembly 674 na AFM35_scaffold108 unplaced-scaffold na na JBNTJU010000108.1 = NZ_JBNTJU010000108.1 Primary Assembly 659 na AFM35_scaffold109 unplaced-scaffold na na JBNTJU010000109.1 = NZ_JBNTJU010000109.1 Primary Assembly 569 na AFM35_scaffold110 unplaced-scaffold na na JBNTJU010000110.1 = NZ_JBNTJU010000110.1 Primary Assembly 531 na AFM35_scaffold111 unplaced-scaffold na na JBNTJU010000111.1 = NZ_JBNTJU010000111.1 Primary Assembly 508 na