# Assembly name:  fChaTrf1.hap1
# Organism name:  Chaetodon trifascialis (chevron butterflyfish)
# Isolate:  fChaTrf1
# Sex:  male
# Taxid:          109706
# BioSample:      SAMN41253346
# BioProject:     PRJNA1108764
# Submitter:      Vertebrate Genomes Project
# Date:           2024-05-29
# Assembly type:  haploid (haplotype 1)
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBDMAR01
# Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; purge_dups v. 2.2; yahs v. 1.2a.2 + galaxy1
# Expected final version: no
# Genome coverage: 61.3x
# Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_039877785.1
# RefSeq assembly accession: GCF_039877785.1
# RefSeq assembly and GenBank assemblies identical: no
# Linked assembly: GCA_039877575.1 (haplotype 2)
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_039877965.1	GCF_039877965.1	Primary Assembly
## GCA_039877975.1		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	CM078133.1	=	NC_092056.1	Primary Assembly	35129900	na
SUPER_2	assembled-molecule	2	Chromosome	CM078134.1	=	NC_092057.1	Primary Assembly	32853373	na
SUPER_3	assembled-molecule	3	Chromosome	CM078135.1	=	NC_092058.1	Primary Assembly	32615356	na
SUPER_4	assembled-molecule	4	Chromosome	CM078136.1	=	NC_092059.1	Primary Assembly	31695903	na
SUPER_5	assembled-molecule	5	Chromosome	CM078137.1	=	NC_092060.1	Primary Assembly	31367202	na
SUPER_6	assembled-molecule	6	Chromosome	CM078138.1	=	NC_092061.1	Primary Assembly	31221305	na
SUPER_7	assembled-molecule	7	Chromosome	CM078139.1	=	NC_092062.1	Primary Assembly	31205575	na
SUPER_8	assembled-molecule	8	Chromosome	CM078140.1	=	NC_092063.1	Primary Assembly	30574040	na
SUPER_9	assembled-molecule	9	Chromosome	CM078141.1	=	NC_092064.1	Primary Assembly	30316557	na
SUPER_10	assembled-molecule	10	Chromosome	CM078142.1	=	NC_092065.1	Primary Assembly	29774467	na
SUPER_11	assembled-molecule	11	Chromosome	CM078143.1	=	NC_092066.1	Primary Assembly	29139200	na
SUPER_12	assembled-molecule	12	Chromosome	CM078144.1	=	NC_092067.1	Primary Assembly	28028026	na
SUPER_13	assembled-molecule	13	Chromosome	CM078145.1	=	NC_092068.1	Primary Assembly	27900003	na
SUPER_14	assembled-molecule	14	Chromosome	CM078146.1	=	NC_092069.1	Primary Assembly	27634441	na
SUPER_15	assembled-molecule	15	Chromosome	CM078147.1	=	NC_092070.1	Primary Assembly	26162569	na
SUPER_16	assembled-molecule	16	Chromosome	CM078148.1	=	NC_092071.1	Primary Assembly	26063788	na
SUPER_17	assembled-molecule	17	Chromosome	CM078149.1	=	NC_092072.1	Primary Assembly	25495481	na
SUPER_18	assembled-molecule	18	Chromosome	CM078150.1	=	NC_092073.1	Primary Assembly	24687060	na
SUPER_19	assembled-molecule	19	Chromosome	CM078151.1	=	NC_092074.1	Primary Assembly	24595100	na
SUPER_20	assembled-molecule	20	Chromosome	CM078152.1	=	NC_092075.1	Primary Assembly	24492571	na
SUPER_21	assembled-molecule	21	Chromosome	CM078153.1	=	NC_092076.1	Primary Assembly	22242857	na
SUPER_22	assembled-molecule	22	Chromosome	CM078154.1	=	NC_092077.1	Primary Assembly	21256836	na
SUPER_23	assembled-molecule	23	Chromosome	CM078155.1	=	NC_092078.1	Primary Assembly	19834377	na
SUPER_24	assembled-molecule	24	Chromosome	CM078156.1	=	NC_092079.1	Primary Assembly	15062243	na
SUPER_23_unloc_1	unlocalized-scaffold	23	Chromosome	JBDMAR010000028.1	=	NW_027255837.1	Primary Assembly	243058	na
SUPER_24_unloc_1	unlocalized-scaffold	24	Chromosome	JBDMAR010000026.1	=	NW_027255838.1	Primary Assembly	2112802	na
Scaffold_49	unplaced-scaffold	na	na	JBDMAR010000027.1	=	NW_027255841.1	Primary Assembly	339233	na
Scaffold_50	unplaced-scaffold	na	na	JBDMAR010000029.1	=	NW_027255842.1	Primary Assembly	103600	na
Scaffold_51	unplaced-scaffold	na	na	JBDMAR010000030.1	=	NW_027255843.1	Primary Assembly	76048	na
Scaffold_52	unplaced-scaffold	na	na	JBDMAR010000031.1	=	NW_027255844.1	Primary Assembly	66602	na
Scaffold_53	unplaced-scaffold	na	na	JBDMAR010000032.1	=	NW_027255845.1	Primary Assembly	53268	na
Scaffold_54	unplaced-scaffold	na	na	JBDMAR010000033.1	=	NW_027255846.1	Primary Assembly	48785	na
Scaffold_55	unplaced-scaffold	na	na	JBDMAR010000034.1	=	NW_027255847.1	Primary Assembly	30250	na
Scaffold_127	unplaced-scaffold	na	na	JBDMAR010000035.1	=	NW_027255839.1	Primary Assembly	26193	na
Scaffold_56	unplaced-scaffold	na	na	JBDMAR010000036.1	=	NW_027255848.1	Primary Assembly	21647	na
Scaffold_129	unplaced-scaffold	na	na	JBDMAR010000037.1	=	NW_027255840.1	Primary Assembly	19307	na
ptg000001l_rotated	assembled-molecule	MT	Mitochondrion	CM078158.1	<>	na	non-nuclear	16497	na