# Assembly name: RoL_Dexc_Guam_v1.1 # Organism name: Doryrhamphus excisus (bluestripe pipefish) # Infraspecific name: strain=RoL-2023G # Sex: male # Taxid: 161450 # BioSample: SAMN38716951 # BioProject: PRJNA851781 # Submitter: University of Idaho at Moscow # Date: 2024-03-07 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAXOAO01 # Assembly method: Hifiasm v. 0.16.1 # Expected final version: No # Genome coverage: 100.0x # Sequencing technology: Pacbio Hi-Fi; Phase Genomics Hi-C # RefSeq category: Reference Genome # GenBank assembly accession: GCA_037039965.2 # RefSeq assembly accession: GCF_037039965.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_037039995.2 GCF_037039995.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HiC_scaffold_1 assembled-molecule LG1 Linkage Group CM073378.1 = NC_136357.1 Primary Assembly 29816736 na HiC_scaffold_2 assembled-molecule LG2 Linkage Group CM073379.1 = NC_136358.1 Primary Assembly 29677155 na HiC_scaffold_3 assembled-molecule LG3 Linkage Group CM073380.1 = NC_136359.1 Primary Assembly 26052017 na HiC_scaffold_4 assembled-molecule LG4 Linkage Group CM073381.1 = NC_136360.1 Primary Assembly 25190774 na HiC_scaffold_5 assembled-molecule LG5 Linkage Group CM073382.1 = NC_136361.1 Primary Assembly 24951791 na HiC_scaffold_6 assembled-molecule LG6 Linkage Group CM073383.1 = NC_136362.1 Primary Assembly 24503049 na HiC_scaffold_7 assembled-molecule LG7 Linkage Group CM073384.1 = NC_136363.1 Primary Assembly 24245948 na HiC_scaffold_8 assembled-molecule LG8 Linkage Group CM073385.1 = NC_136364.1 Primary Assembly 23719456 na HiC_scaffold_9 assembled-molecule LG9 Linkage Group CM073386.1 = NC_136365.1 Primary Assembly 22932371 na HiC_scaffold_10 assembled-molecule LG10 Linkage Group CM073387.1 = NC_136366.1 Primary Assembly 22273047 na HiC_scaffold_11 assembled-molecule LG11 Linkage Group CM073388.1 = NC_136367.1 Primary Assembly 22159724 na HiC_scaffold_12 assembled-molecule LG12 Linkage Group CM073389.1 = NC_136368.1 Primary Assembly 21724761 na HiC_scaffold_13 assembled-molecule LG13 Linkage Group CM073390.1 = NC_136369.1 Primary Assembly 21144698 na HiC_scaffold_14 assembled-molecule LG14 Linkage Group CM073391.1 = NC_136370.1 Primary Assembly 20232313 na HiC_scaffold_15 assembled-molecule LG15 Linkage Group CM073392.1 = NC_136371.1 Primary Assembly 19154525 na HiC_scaffold_16 assembled-molecule LG16 Linkage Group CM073393.1 = NC_136372.1 Primary Assembly 19086478 na HiC_scaffold_17 assembled-molecule LG17 Linkage Group CM073394.1 = NC_136373.1 Primary Assembly 18891023 na HiC_scaffold_18 assembled-molecule LG18 Linkage Group CM073395.1 = NC_136374.1 Primary Assembly 18339350 na HiC_scaffold_19 assembled-molecule LG19 Linkage Group CM073396.1 = NC_136375.1 Primary Assembly 17238952 na HiC_scaffold_20 assembled-molecule LG20 Linkage Group CM073397.1 = NC_136376.1 Primary Assembly 16610136 na HiC_scaffold_21 assembled-molecule LG21 Linkage Group CM073398.1 = NC_136377.1 Primary Assembly 15560954 na HiC_scaffold_22 assembled-molecule LG22 Linkage Group CM073399.1 = NC_136378.1 Primary Assembly 13033625 na HiC_scaffold_23 assembled-molecule LG23 Linkage Group CM073400.1 = NC_136379.1 Primary Assembly 10568711 na HiC_scaffold_24 unplaced-scaffold na na JAXOAO010000024.1 = NW_027621862.1 Primary Assembly 8283974 na HiC_scaffold_25 unplaced-scaffold na na JAXOAO010000025.1 = NW_027621863.1 Primary Assembly 241428 na HiC_scaffold_26 unplaced-scaffold na na JAXOAO010000026.1 = NW_027621864.1 Primary Assembly 226678 na HiC_scaffold_27 unplaced-scaffold na na JAXOAO010000027.1 = NW_027621865.1 Primary Assembly 214641 na HiC_scaffold_28 unplaced-scaffold na na JAXOAO010000028.1 = NW_027621866.1 Primary Assembly 201984 na HiC_scaffold_29 unplaced-scaffold na na JAXOAO010000029.1 = NW_027621867.1 Primary Assembly 193363 na HiC_scaffold_30 unplaced-scaffold na na JAXOAO010000030.1 = NW_027621868.1 Primary Assembly 160394 na HiC_scaffold_31 unplaced-scaffold na na JAXOAO010000031.1 = NW_027621869.1 Primary Assembly 149190 na HiC_scaffold_43 unplaced-scaffold na na JAXOAO010000037.1 = NW_027621870.1 Primary Assembly 53021 na HiC_scaffold_53 unplaced-scaffold na na JAXOAO010000040.1 = NW_027621871.1 Primary Assembly 40245 na HiC_scaffold_56 unplaced-scaffold na na JAXOAO010000042.1 = NW_027621872.1 Primary Assembly 39285 na HiC_scaffold_58 unplaced-scaffold na na JAXOAO010000043.1 = NW_027621873.1 Primary Assembly 38072 na HiC_scaffold_60 unplaced-scaffold na na JAXOAO010000045.1 = NW_027621874.1 Primary Assembly 37412 na HiC_scaffold_62 unplaced-scaffold na na JAXOAO010000046.1 = NW_027621875.1 Primary Assembly 37162 na HiC_scaffold_66 unplaced-scaffold na na JAXOAO010000047.1 = NW_027621876.1 Primary Assembly 36152 na HiC_scaffold_73 unplaced-scaffold na na JAXOAO010000049.1 = NW_027621877.1 Primary Assembly 32261 na HiC_scaffold_74 unplaced-scaffold na na JAXOAO010000050.1 = NW_027621878.1 Primary Assembly 32034 na HiC_scaffold_75 unplaced-scaffold na na JAXOAO010000051.1 = NW_027621879.1 Primary Assembly 31962 na HiC_scaffold_78 unplaced-scaffold na na JAXOAO010000052.1 = NW_027621880.1 Primary Assembly 30764 na HiC_scaffold_81 unplaced-scaffold na na JAXOAO010000054.1 = NW_027621881.1 Primary Assembly 30290 na HiC_scaffold_82 unplaced-scaffold na na JAXOAO010000055.1 = NW_027621882.1 Primary Assembly 30239 na HiC_scaffold_83 unplaced-scaffold na na JAXOAO010000056.1 = NW_027621883.1 Primary Assembly 29918 na HiC_scaffold_84 unplaced-scaffold na na JAXOAO010000057.1 = NW_027621884.1 Primary Assembly 28857 na HiC_scaffold_90 unplaced-scaffold na na JAXOAO010000058.1 = NW_027621885.1 Primary Assembly 27756 na HiC_scaffold_97 unplaced-scaffold na na JAXOAO010000060.1 = NW_027621886.1 Primary Assembly 24025 na HiC_scaffold_100 unplaced-scaffold na na JAXOAO010000061.1 = NW_027621860.1 Primary Assembly 20908 na HiC_scaffold_106 unplaced-scaffold na na JAXOAO010000064.1 = NW_027621861.1 Primary Assembly 8748 na