# Assembly name: ASM3447060v1 # Organism name: Candidatus Cyrtobacter comes (a-proteobacteria) # Infraspecific name: strain=BOD18 # Taxid: 675776 # BioSample: SAMN27755636 # BioProject: PRJNA831616 # Submitter: University of Pavia # Date: 2023-12-18 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JARGYT01 # Assembly method: SPAdes v. 3.6 # Expected final version: yes # Genome coverage: 400.0x # Sequencing technology: Illumina HiSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_034470605.1 # RefSeq assembly accession: GCF_034470605.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_034470615.1 GCF_034470615.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Cyrtobacter_001 unplaced-scaffold na na JARGYT010000001.1 = NZ_JARGYT010000001.1 Primary Assembly 68320 na Cyrtobacter_002 unplaced-scaffold na na JARGYT010000002.1 = NZ_JARGYT010000002.1 Primary Assembly 36775 na Cyrtobacter_003 unplaced-scaffold na na JARGYT010000003.1 = NZ_JARGYT010000003.1 Primary Assembly 30833 na Cyrtobacter_004 unplaced-scaffold na na JARGYT010000004.1 = NZ_JARGYT010000004.1 Primary Assembly 29294 na Cyrtobacter_005 unplaced-scaffold na na JARGYT010000005.1 = NZ_JARGYT010000005.1 Primary Assembly 27639 na Cyrtobacter_006 unplaced-scaffold na na JARGYT010000006.1 = NZ_JARGYT010000006.1 Primary Assembly 27456 na Cyrtobacter_007 unplaced-scaffold na na JARGYT010000007.1 = NZ_JARGYT010000007.1 Primary Assembly 27423 na Cyrtobacter_008 unplaced-scaffold na na JARGYT010000008.1 = NZ_JARGYT010000008.1 Primary Assembly 26469 na Cyrtobacter_009 unplaced-scaffold na na JARGYT010000009.1 = NZ_JARGYT010000009.1 Primary Assembly 25395 na Cyrtobacter_010 unplaced-scaffold na na JARGYT010000010.1 = NZ_JARGYT010000010.1 Primary Assembly 23322 na Cyrtobacter_011 unplaced-scaffold na na JARGYT010000011.1 = NZ_JARGYT010000011.1 Primary Assembly 22783 na Cyrtobacter_012 unplaced-scaffold na na JARGYT010000012.1 = NZ_JARGYT010000012.1 Primary Assembly 22700 na Cyrtobacter_013 unplaced-scaffold na na JARGYT010000013.1 = NZ_JARGYT010000013.1 Primary Assembly 22403 na Cyrtobacter_014 unplaced-scaffold na na JARGYT010000014.1 = NZ_JARGYT010000014.1 Primary Assembly 21929 na Cyrtobacter_015 unplaced-scaffold na na JARGYT010000015.1 = NZ_JARGYT010000015.1 Primary Assembly 20261 na Cyrtobacter_016 unplaced-scaffold na na JARGYT010000016.1 = NZ_JARGYT010000016.1 Primary Assembly 20201 na Cyrtobacter_017 unplaced-scaffold na na JARGYT010000017.1 = NZ_JARGYT010000017.1 Primary Assembly 18951 na Cyrtobacter_018 unplaced-scaffold na na JARGYT010000018.1 = NZ_JARGYT010000018.1 Primary Assembly 18689 na Cyrtobacter_019 unplaced-scaffold na na JARGYT010000019.1 = NZ_JARGYT010000019.1 Primary Assembly 18223 na Cyrtobacter_020 unplaced-scaffold na na JARGYT010000020.1 = NZ_JARGYT010000020.1 Primary Assembly 18183 na Cyrtobacter_021 unplaced-scaffold na na JARGYT010000021.1 = NZ_JARGYT010000021.1 Primary Assembly 17855 na Cyrtobacter_022 unplaced-scaffold na na JARGYT010000022.1 = NZ_JARGYT010000022.1 Primary Assembly 17078 na Cyrtobacter_023 unplaced-scaffold na na JARGYT010000023.1 = NZ_JARGYT010000023.1 Primary Assembly 17065 na Cyrtobacter_024 unplaced-scaffold na na JARGYT010000024.1 = NZ_JARGYT010000024.1 Primary Assembly 16449 na Cyrtobacter_025 unplaced-scaffold na na JARGYT010000025.1 = NZ_JARGYT010000025.1 Primary Assembly 16319 na Cyrtobacter_026 unplaced-scaffold na na JARGYT010000026.1 = NZ_JARGYT010000026.1 Primary Assembly 14935 na Cyrtobacter_027 unplaced-scaffold na na JARGYT010000027.1 = NZ_JARGYT010000027.1 Primary Assembly 14532 na Cyrtobacter_028 unplaced-scaffold na na JARGYT010000028.1 = NZ_JARGYT010000028.1 Primary Assembly 14445 na Cyrtobacter_029 unplaced-scaffold na na JARGYT010000029.1 = NZ_JARGYT010000029.1 Primary Assembly 13868 na Cyrtobacter_030 unplaced-scaffold na na JARGYT010000030.1 = NZ_JARGYT010000030.1 Primary Assembly 13862 na Cyrtobacter_031 unplaced-scaffold na na JARGYT010000031.1 = NZ_JARGYT010000031.1 Primary Assembly 13226 na Cyrtobacter_032 unplaced-scaffold na na JARGYT010000032.1 = NZ_JARGYT010000032.1 Primary Assembly 13133 na Cyrtobacter_033 unplaced-scaffold na na JARGYT010000033.1 = NZ_JARGYT010000033.1 Primary Assembly 13035 na Cyrtobacter_034 unplaced-scaffold na na JARGYT010000034.1 = NZ_JARGYT010000034.1 Primary Assembly 12751 na Cyrtobacter_035 unplaced-scaffold na na JARGYT010000035.1 = NZ_JARGYT010000035.1 Primary Assembly 12006 na Cyrtobacter_036 unplaced-scaffold na na JARGYT010000036.1 = NZ_JARGYT010000036.1 Primary Assembly 11612 na Cyrtobacter_037 unplaced-scaffold na na JARGYT010000037.1 = NZ_JARGYT010000037.1 Primary Assembly 11325 na Cyrtobacter_038 unplaced-scaffold na na JARGYT010000038.1 = NZ_JARGYT010000038.1 Primary Assembly 11058 na Cyrtobacter_039 unplaced-scaffold na na JARGYT010000039.1 = NZ_JARGYT010000039.1 Primary Assembly 10993 na Cyrtobacter_040 unplaced-scaffold na na JARGYT010000040.1 = NZ_JARGYT010000040.1 Primary Assembly 10501 na Cyrtobacter_041 unplaced-scaffold na na JARGYT010000041.1 = NZ_JARGYT010000041.1 Primary Assembly 10435 na Cyrtobacter_042 unplaced-scaffold na na JARGYT010000042.1 = NZ_JARGYT010000042.1 Primary Assembly 10038 na Cyrtobacter_043 unplaced-scaffold na na JARGYT010000043.1 = NZ_JARGYT010000043.1 Primary Assembly 9805 na Cyrtobacter_044 unplaced-scaffold na na JARGYT010000044.1 = NZ_JARGYT010000044.1 Primary Assembly 9737 na Cyrtobacter_045 unplaced-scaffold na na JARGYT010000045.1 = NZ_JARGYT010000045.1 Primary Assembly 9713 na Cyrtobacter_046 unplaced-scaffold na na JARGYT010000046.1 = NZ_JARGYT010000046.1 Primary Assembly 9682 na Cyrtobacter_047 unplaced-scaffold na na JARGYT010000047.1 = NZ_JARGYT010000047.1 Primary Assembly 9533 na Cyrtobacter_048 unplaced-scaffold na na JARGYT010000048.1 = NZ_JARGYT010000048.1 Primary Assembly 9518 na Cyrtobacter_049 unplaced-scaffold na na JARGYT010000049.1 = NZ_JARGYT010000049.1 Primary Assembly 9101 na Cyrtobacter_050 unplaced-scaffold na na JARGYT010000050.1 = NZ_JARGYT010000050.1 Primary Assembly 8542 na Cyrtobacter_051 unplaced-scaffold na na JARGYT010000051.1 = NZ_JARGYT010000051.1 Primary Assembly 8537 na Cyrtobacter_052 unplaced-scaffold na na JARGYT010000052.1 = NZ_JARGYT010000052.1 Primary Assembly 8414 na Cyrtobacter_053 unplaced-scaffold na na JARGYT010000053.1 = NZ_JARGYT010000053.1 Primary Assembly 8368 na Cyrtobacter_054 unplaced-scaffold na na JARGYT010000054.1 = NZ_JARGYT010000054.1 Primary Assembly 8144 na Cyrtobacter_055 unplaced-scaffold na na JARGYT010000055.1 = NZ_JARGYT010000055.1 Primary Assembly 8094 na Cyrtobacter_056 unplaced-scaffold na na JARGYT010000056.1 = NZ_JARGYT010000056.1 Primary Assembly 7997 na Cyrtobacter_057 unplaced-scaffold na na JARGYT010000057.1 = NZ_JARGYT010000057.1 Primary Assembly 7914 na Cyrtobacter_058 unplaced-scaffold na na JARGYT010000058.1 = NZ_JARGYT010000058.1 Primary Assembly 7846 na Cyrtobacter_059 unplaced-scaffold na na JARGYT010000059.1 = NZ_JARGYT010000059.1 Primary Assembly 7832 na Cyrtobacter_060 unplaced-scaffold na na JARGYT010000060.1 = NZ_JARGYT010000060.1 Primary Assembly 7544 na Cyrtobacter_061 unplaced-scaffold na na JARGYT010000061.1 = NZ_JARGYT010000061.1 Primary Assembly 7490 na Cyrtobacter_062 unplaced-scaffold na na JARGYT010000062.1 = NZ_JARGYT010000062.1 Primary Assembly 7459 na Cyrtobacter_063 unplaced-scaffold na na JARGYT010000063.1 = NZ_JARGYT010000063.1 Primary Assembly 7400 na Cyrtobacter_064 unplaced-scaffold na na JARGYT010000064.1 = NZ_JARGYT010000064.1 Primary Assembly 7332 na Cyrtobacter_065 unplaced-scaffold na na JARGYT010000065.1 = NZ_JARGYT010000065.1 Primary Assembly 7290 na Cyrtobacter_066 unplaced-scaffold na na JARGYT010000066.1 = NZ_JARGYT010000066.1 Primary Assembly 6992 na Cyrtobacter_067 unplaced-scaffold na na JARGYT010000067.1 = NZ_JARGYT010000067.1 Primary Assembly 6882 na Cyrtobacter_068 unplaced-scaffold na na JARGYT010000068.1 = NZ_JARGYT010000068.1 Primary Assembly 6589 na Cyrtobacter_069 unplaced-scaffold na na JARGYT010000069.1 = NZ_JARGYT010000069.1 Primary Assembly 6587 na Cyrtobacter_070 unplaced-scaffold na na JARGYT010000070.1 = NZ_JARGYT010000070.1 Primary Assembly 6431 na Cyrtobacter_071 unplaced-scaffold na na JARGYT010000071.1 = NZ_JARGYT010000071.1 Primary Assembly 6171 na Cyrtobacter_072 unplaced-scaffold na na JARGYT010000072.1 = NZ_JARGYT010000072.1 Primary Assembly 6168 na Cyrtobacter_073 unplaced-scaffold na na JARGYT010000073.1 = NZ_JARGYT010000073.1 Primary Assembly 6107 na Cyrtobacter_074 unplaced-scaffold na na JARGYT010000074.1 = NZ_JARGYT010000074.1 Primary Assembly 6072 na Cyrtobacter_075 unplaced-scaffold na na JARGYT010000075.1 = NZ_JARGYT010000075.1 Primary Assembly 5999 na Cyrtobacter_076 unplaced-scaffold na na JARGYT010000076.1 = NZ_JARGYT010000076.1 Primary Assembly 5950 na Cyrtobacter_077 unplaced-scaffold na na JARGYT010000077.1 = NZ_JARGYT010000077.1 Primary Assembly 5810 na Cyrtobacter_078 unplaced-scaffold na na JARGYT010000078.1 = NZ_JARGYT010000078.1 Primary Assembly 5693 na Cyrtobacter_079 unplaced-scaffold na na JARGYT010000079.1 = NZ_JARGYT010000079.1 Primary Assembly 5620 na Cyrtobacter_080 unplaced-scaffold na na JARGYT010000080.1 = NZ_JARGYT010000080.1 Primary Assembly 5558 na Cyrtobacter_081 unplaced-scaffold na na JARGYT010000081.1 = NZ_JARGYT010000081.1 Primary Assembly 5510 na Cyrtobacter_082 unplaced-scaffold na na JARGYT010000082.1 = NZ_JARGYT010000082.1 Primary Assembly 5202 na Cyrtobacter_083 unplaced-scaffold na na JARGYT010000083.1 = NZ_JARGYT010000083.1 Primary Assembly 5152 na Cyrtobacter_084 unplaced-scaffold na na JARGYT010000084.1 = NZ_JARGYT010000084.1 Primary Assembly 5073 na Cyrtobacter_085 unplaced-scaffold na na JARGYT010000085.1 = NZ_JARGYT010000085.1 Primary Assembly 5000 na Cyrtobacter_086 unplaced-scaffold na na JARGYT010000086.1 = NZ_JARGYT010000086.1 Primary Assembly 4978 na Cyrtobacter_087 unplaced-scaffold na na JARGYT010000087.1 = NZ_JARGYT010000087.1 Primary Assembly 4867 na Cyrtobacter_088 unplaced-scaffold na na JARGYT010000088.1 = NZ_JARGYT010000088.1 Primary Assembly 4865 na Cyrtobacter_089 unplaced-scaffold na na JARGYT010000089.1 = NZ_JARGYT010000089.1 Primary Assembly 4811 na Cyrtobacter_090 unplaced-scaffold na na JARGYT010000090.1 = NZ_JARGYT010000090.1 Primary Assembly 4741 na Cyrtobacter_091 unplaced-scaffold na na JARGYT010000091.1 = NZ_JARGYT010000091.1 Primary Assembly 4713 na Cyrtobacter_092 unplaced-scaffold na na JARGYT010000092.1 = NZ_JARGYT010000092.1 Primary Assembly 4708 na Cyrtobacter_093 unplaced-scaffold na na JARGYT010000093.1 = NZ_JARGYT010000093.1 Primary Assembly 4670 na Cyrtobacter_094 unplaced-scaffold na na JARGYT010000094.1 = NZ_JARGYT010000094.1 Primary Assembly 4669 na Cyrtobacter_095 unplaced-scaffold na na JARGYT010000095.1 = NZ_JARGYT010000095.1 Primary Assembly 4666 na Cyrtobacter_096 unplaced-scaffold na na JARGYT010000096.1 = NZ_JARGYT010000096.1 Primary Assembly 4590 na Cyrtobacter_097 unplaced-scaffold na na JARGYT010000097.1 = NZ_JARGYT010000097.1 Primary Assembly 4455 na Cyrtobacter_098 unplaced-scaffold na na JARGYT010000098.1 = NZ_JARGYT010000098.1 Primary Assembly 4339 na Cyrtobacter_099 unplaced-scaffold na na JARGYT010000099.1 = NZ_JARGYT010000099.1 Primary Assembly 4210 na Cyrtobacter_100 unplaced-scaffold na na JARGYT010000100.1 = NZ_JARGYT010000100.1 Primary Assembly 4210 na Cyrtobacter_101 unplaced-scaffold na na JARGYT010000101.1 = NZ_JARGYT010000101.1 Primary Assembly 4111 na Cyrtobacter_102 unplaced-scaffold na na JARGYT010000102.1 = NZ_JARGYT010000102.1 Primary Assembly 4079 na Cyrtobacter_103 unplaced-scaffold na na JARGYT010000103.1 = NZ_JARGYT010000103.1 Primary Assembly 3999 na Cyrtobacter_104 unplaced-scaffold na na JARGYT010000104.1 = NZ_JARGYT010000104.1 Primary Assembly 3787 na Cyrtobacter_105 unplaced-scaffold na na JARGYT010000105.1 = NZ_JARGYT010000105.1 Primary Assembly 3771 na Cyrtobacter_106 unplaced-scaffold na na JARGYT010000106.1 = NZ_JARGYT010000106.1 Primary Assembly 3476 na Cyrtobacter_107 unplaced-scaffold na na JARGYT010000107.1 = NZ_JARGYT010000107.1 Primary Assembly 3455 na Cyrtobacter_108 unplaced-scaffold na na JARGYT010000108.1 = NZ_JARGYT010000108.1 Primary Assembly 3430 na Cyrtobacter_109 unplaced-scaffold na na JARGYT010000109.1 = NZ_JARGYT010000109.1 Primary Assembly 3264 na Cyrtobacter_110 unplaced-scaffold na na JARGYT010000110.1 = NZ_JARGYT010000110.1 Primary Assembly 3248 na Cyrtobacter_111 unplaced-scaffold na na JARGYT010000111.1 = NZ_JARGYT010000111.1 Primary Assembly 3243 na Cyrtobacter_112 unplaced-scaffold na na JARGYT010000112.1 = NZ_JARGYT010000112.1 Primary Assembly 3238 na Cyrtobacter_113 unplaced-scaffold na na JARGYT010000113.1 = NZ_JARGYT010000113.1 Primary Assembly 3153 na Cyrtobacter_114 unplaced-scaffold na na JARGYT010000114.1 = NZ_JARGYT010000114.1 Primary Assembly 3085 na Cyrtobacter_115 unplaced-scaffold na na JARGYT010000115.1 = NZ_JARGYT010000115.1 Primary Assembly 3059 na Cyrtobacter_116 unplaced-scaffold na na JARGYT010000116.1 = NZ_JARGYT010000116.1 Primary Assembly 3021 na Cyrtobacter_117 unplaced-scaffold na na JARGYT010000117.1 = NZ_JARGYT010000117.1 Primary Assembly 2924 na Cyrtobacter_118 unplaced-scaffold na na JARGYT010000118.1 = NZ_JARGYT010000118.1 Primary Assembly 2918 na Cyrtobacter_119 unplaced-scaffold na na JARGYT010000119.1 = NZ_JARGYT010000119.1 Primary Assembly 2864 na Cyrtobacter_120 unplaced-scaffold na na JARGYT010000120.1 = NZ_JARGYT010000120.1 Primary Assembly 2833 na Cyrtobacter_121 unplaced-scaffold na na JARGYT010000121.1 = NZ_JARGYT010000121.1 Primary Assembly 2812 na Cyrtobacter_122 unplaced-scaffold na na JARGYT010000122.1 = NZ_JARGYT010000122.1 Primary Assembly 2805 na Cyrtobacter_123 unplaced-scaffold na na JARGYT010000123.1 = NZ_JARGYT010000123.1 Primary Assembly 2582 na Cyrtobacter_124 unplaced-scaffold na na JARGYT010000124.1 = NZ_JARGYT010000124.1 Primary Assembly 2324 na Cyrtobacter_125 unplaced-scaffold na na JARGYT010000125.1 = NZ_JARGYT010000125.1 Primary Assembly 2262 na Cyrtobacter_126 unplaced-scaffold na na JARGYT010000126.1 = NZ_JARGYT010000126.1 Primary Assembly 2252 na Cyrtobacter_127 unplaced-scaffold na na JARGYT010000127.1 = NZ_JARGYT010000127.1 Primary Assembly 2116 na Cyrtobacter_128 unplaced-scaffold na na JARGYT010000128.1 = NZ_JARGYT010000128.1 Primary Assembly 2110 na Cyrtobacter_129 unplaced-scaffold na na JARGYT010000129.1 = NZ_JARGYT010000129.1 Primary Assembly 1964 na Cyrtobacter_130 unplaced-scaffold na na JARGYT010000130.1 = NZ_JARGYT010000130.1 Primary Assembly 1887 na Cyrtobacter_131 unplaced-scaffold na na JARGYT010000131.1 = NZ_JARGYT010000131.1 Primary Assembly 1797 na Cyrtobacter_132 unplaced-scaffold na na JARGYT010000132.1 = NZ_JARGYT010000132.1 Primary Assembly 1688 na Cyrtobacter_133 unplaced-scaffold na na JARGYT010000133.1 = NZ_JARGYT010000133.1 Primary Assembly 1517 na Cyrtobacter_134 unplaced-scaffold na na JARGYT010000134.1 = NZ_JARGYT010000134.1 Primary Assembly 1334 na Cyrtobacter_135 unplaced-scaffold na na JARGYT010000135.1 = NZ_JARGYT010000135.1 Primary Assembly 1322 na Cyrtobacter_136 unplaced-scaffold na na JARGYT010000136.1 = NZ_JARGYT010000136.1 Primary Assembly 1259 na Cyrtobacter_137 unplaced-scaffold na na JARGYT010000137.1 = NZ_JARGYT010000137.1 Primary Assembly 1106 na Cyrtobacter_138 unplaced-scaffold na na JARGYT010000138.1 = NZ_JARGYT010000138.1 Primary Assembly 1099 na Cyrtobacter_139 unplaced-scaffold na na JARGYT010000139.1 = NZ_JARGYT010000139.1 Primary Assembly 1097 na Cyrtobacter_140 unplaced-scaffold na na JARGYT010000140.1 = NZ_JARGYT010000140.1 Primary Assembly 732 na Cyrtobacter_141 unplaced-scaffold na na JARGYT010000141.1 = NZ_JARGYT010000141.1 Primary Assembly 560 na