# Assembly name:  ASM3116895v1
# Organism name:  Gadus macrocephalus (Pacific cod)
# Taxid:          80720
# BioSample:      SAMN33716189
# BioProject:     PRJNA943286
# Submitter:      NOAA Fisheries
# Date:           2023-09-05
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# Assembly method: We used PacBio HiFi in HiFiasm (version 0.16.1-r375) for assembly and phasing. This was followed by Proximo scaffolding (this is internal software that does not have a formal version) and finished using Juicebox (version 1.11.08). v. see text
# Expected final version: yes
# Reference guided assembly: Gadmor3.0
# Genome coverage: 45x
# Sequencing technology: PacBio
# RefSeq category: Representative Genome
# GenBank assembly accession: GCA_031168955.1
# RefSeq assembly accession: GCF_031168955.1
# RefSeq assembly and GenBank assemblies identical: no
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_031168965.1	GCF_031168965.1	Primary Assembly
## 	GCF_031612925.1	non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
1	assembled-molecule	1	Chromosome	CP133525.1	=	NC_082382.1	Primary Assembly	26289739	na
2	assembled-molecule	2	Chromosome	CP133526.1	=	NC_082383.1	Primary Assembly	23805147	na
3	assembled-molecule	3	Chromosome	CP133527.1	=	NC_082384.1	Primary Assembly	26984552	na
4	assembled-molecule	4	Chromosome	CP133528.1	=	NC_082385.1	Primary Assembly	35077496	na
5	assembled-molecule	5	Chromosome	CP133529.1	=	NC_082386.1	Primary Assembly	22175970	na
6	assembled-molecule	6	Chromosome	CP133530.1	=	NC_082387.1	Primary Assembly	27900680	na
7	assembled-molecule	7	Chromosome	CP133531.1	=	NC_082388.1	Primary Assembly	28186669	na
8	assembled-molecule	8	Chromosome	CP133532.1	=	NC_082389.1	Primary Assembly	23760065	na
9	assembled-molecule	9	Chromosome	CP133533.1	=	NC_082390.1	Primary Assembly	23393856	na
10	assembled-molecule	10	Chromosome	CP133534.1	=	NC_082391.1	Primary Assembly	23728004	na
11	assembled-molecule	11	Chromosome	CP133535.1	=	NC_082392.1	Primary Assembly	26267057	na
12	assembled-molecule	12	Chromosome	CP133536.1	=	NC_082393.1	Primary Assembly	27587113	na
13	assembled-molecule	13	Chromosome	CP133537.1	=	NC_082394.1	Primary Assembly	22312454	na
14	assembled-molecule	14	Chromosome	CP133538.1	=	NC_082395.1	Primary Assembly	26048790	na
15	assembled-molecule	15	Chromosome	CP133539.1	=	NC_082396.1	Primary Assembly	24646214	na
16	assembled-molecule	16	Chromosome	CP133540.1	=	NC_082397.1	Primary Assembly	29952890	na
17	assembled-molecule	17	Chromosome	CP133541.1	=	NC_082398.1	Primary Assembly	16295523	na
18	assembled-molecule	18	Chromosome	CP133542.1	=	NC_082399.1	Primary Assembly	21077965	na
19	assembled-molecule	19	Chromosome	CP133543.1	=	NC_082400.1	Primary Assembly	17993618	na
20	assembled-molecule	20	Chromosome	CP133544.1	=	NC_082401.1	Primary Assembly	23303860	na
21	assembled-molecule	21	Chromosome	CP133545.1	=	NC_082402.1	Primary Assembly	19478734	na
22	assembled-molecule	22	Chromosome	CP133546.1	=	NC_082403.1	Primary Assembly	19411328	na
23	assembled-molecule	23	Chromosome	CP133547.1	=	NC_082404.1	Primary Assembly	20003359	na
MT	assembled-molecule	MT	Mitochondrion	na	<>	NC_036931.1	non-nuclear	16569	na