# Assembly name: ASM2865711v1 # Organism name: Pseudomonas rubra (g-proteobacteria) # Infraspecific name: strain=ID291 # Taxid: 2942627 # BioSample: SAMN28093772 # BioProject: PRJNA835116 # Submitter: University of Connecticut Graf Lab # Date: 2023-02-15 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAMDGP01 # Assembly method: CLC NGS Cell v. 2021 # Expected final version: yes # Genome coverage: 88x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_028657115.1 # RefSeq assembly accession: GCF_028657115.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_028657125.1 GCF_028657125.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name i291_S42_L001_R1_001_contig_1 unplaced-scaffold na na JAMDGP010000001.1 = NZ_JAMDGP010000001.1 Primary Assembly 427213 na i291_S42_L001_R1_001_contig_2 unplaced-scaffold na na JAMDGP010000002.1 = NZ_JAMDGP010000002.1 Primary Assembly 141217 na i291_S42_L001_R1_001_contig_3 unplaced-scaffold na na JAMDGP010000003.1 = NZ_JAMDGP010000003.1 Primary Assembly 46066 na i291_S42_L001_R1_001_contig_4 unplaced-scaffold na na JAMDGP010000004.1 = NZ_JAMDGP010000004.1 Primary Assembly 34149 na i291_S42_L001_R1_001_contig_5 unplaced-scaffold na na JAMDGP010000005.1 = NZ_JAMDGP010000005.1 Primary Assembly 159868 na i291_S42_L001_R1_001_contig_6 unplaced-scaffold na na JAMDGP010000006.1 = NZ_JAMDGP010000006.1 Primary Assembly 37070 na i291_S42_L001_R1_001_contig_7 unplaced-scaffold na na JAMDGP010000007.1 = NZ_JAMDGP010000007.1 Primary Assembly 89354 na i291_S42_L001_R1_001_contig_8 unplaced-scaffold na na JAMDGP010000008.1 = NZ_JAMDGP010000008.1 Primary Assembly 51557 na i291_S42_L001_R1_001_contig_9 unplaced-scaffold na na JAMDGP010000009.1 = NZ_JAMDGP010000009.1 Primary Assembly 67899 na i291_S42_L001_R1_001_contig_10 unplaced-scaffold na na JAMDGP010000010.1 = NZ_JAMDGP010000010.1 Primary Assembly 81402 na i291_S42_L001_R1_001_contig_11 unplaced-scaffold na na JAMDGP010000011.1 = NZ_JAMDGP010000011.1 Primary Assembly 130828 na i291_S42_L001_R1_001_contig_12 unplaced-scaffold na na JAMDGP010000012.1 = NZ_JAMDGP010000012.1 Primary Assembly 209751 na i291_S42_L001_R1_001_contig_13 unplaced-scaffold na na JAMDGP010000013.1 = NZ_JAMDGP010000013.1 Primary Assembly 310265 na i291_S42_L001_R1_001_contig_14 unplaced-scaffold na na JAMDGP010000014.1 = NZ_JAMDGP010000014.1 Primary Assembly 178294 na i291_S42_L001_R1_001_contig_15 unplaced-scaffold na na JAMDGP010000015.1 = NZ_JAMDGP010000015.1 Primary Assembly 127597 na i291_S42_L001_R1_001_contig_16 unplaced-scaffold na na JAMDGP010000016.1 = NZ_JAMDGP010000016.1 Primary Assembly 117516 na i291_S42_L001_R1_001_contig_17 unplaced-scaffold na na JAMDGP010000017.1 = NZ_JAMDGP010000017.1 Primary Assembly 26073 na i291_S42_L001_R1_001_contig_18 unplaced-scaffold na na JAMDGP010000018.1 = NZ_JAMDGP010000018.1 Primary Assembly 45720 na i291_S42_L001_R1_001_contig_19 unplaced-scaffold na na JAMDGP010000019.1 = NZ_JAMDGP010000019.1 Primary Assembly 23464 na i291_S42_L001_R1_001_contig_20 unplaced-scaffold na na JAMDGP010000020.1 = NZ_JAMDGP010000020.1 Primary Assembly 77019 na i291_S42_L001_R1_001_contig_21 unplaced-scaffold na na JAMDGP010000021.1 = NZ_JAMDGP010000021.1 Primary Assembly 21673 na i291_S42_L001_R1_001_contig_22 unplaced-scaffold na na JAMDGP010000022.1 = NZ_JAMDGP010000022.1 Primary Assembly 599 na i291_S42_L001_R1_001_contig_23 unplaced-scaffold na na JAMDGP010000023.1 = NZ_JAMDGP010000023.1 Primary Assembly 1240 na i291_S42_L001_R1_001_contig_24 unplaced-scaffold na na JAMDGP010000024.1 = NZ_JAMDGP010000024.1 Primary Assembly 44892 na i291_S42_L001_R1_001_contig_25 unplaced-scaffold na na JAMDGP010000025.1 = NZ_JAMDGP010000025.1 Primary Assembly 45913 na i291_S42_L001_R1_001_contig_26 unplaced-scaffold na na JAMDGP010000026.1 = NZ_JAMDGP010000026.1 Primary Assembly 154793 na i291_S42_L001_R1_001_contig_27 unplaced-scaffold na na JAMDGP010000027.1 = NZ_JAMDGP010000027.1 Primary Assembly 177718 na i291_S42_L001_R1_001_contig_28 unplaced-scaffold na na JAMDGP010000028.1 = NZ_JAMDGP010000028.1 Primary Assembly 20498 na i291_S42_L001_R1_001_contig_29 unplaced-scaffold na na JAMDGP010000029.1 = NZ_JAMDGP010000029.1 Primary Assembly 205155 na i291_S42_L001_R1_001_contig_30 unplaced-scaffold na na JAMDGP010000030.1 = NZ_JAMDGP010000030.1 Primary Assembly 50722 na i291_S42_L001_R1_001_contig_31 unplaced-scaffold na na JAMDGP010000031.1 = NZ_JAMDGP010000031.1 Primary Assembly 153972 na i291_S42_L001_R1_001_contig_32 unplaced-scaffold na na JAMDGP010000032.1 = NZ_JAMDGP010000032.1 Primary Assembly 1913 na i291_S42_L001_R1_001_contig_33 unplaced-scaffold na na JAMDGP010000033.1 = NZ_JAMDGP010000033.1 Primary Assembly 119723 na i291_S42_L001_R1_001_contig_34 unplaced-scaffold na na JAMDGP010000034.1 = NZ_JAMDGP010000034.1 Primary Assembly 19857 na i291_S42_L001_R1_001_contig_35 unplaced-scaffold na na JAMDGP010000035.1 = NZ_JAMDGP010000035.1 Primary Assembly 208640 na i291_S42_L001_R1_001_contig_36 unplaced-scaffold na na JAMDGP010000036.1 = NZ_JAMDGP010000036.1 Primary Assembly 83401 na i291_S42_L001_R1_001_contig_37 unplaced-scaffold na na JAMDGP010000037.1 = NZ_JAMDGP010000037.1 Primary Assembly 37264 na i291_S42_L001_R1_001_contig_38 unplaced-scaffold na na JAMDGP010000038.1 = NZ_JAMDGP010000038.1 Primary Assembly 241511 na i291_S42_L001_R1_001_contig_39 unplaced-scaffold na na JAMDGP010000039.1 = NZ_JAMDGP010000039.1 Primary Assembly 22309 na i291_S42_L001_R1_001_contig_40 unplaced-scaffold na na JAMDGP010000040.1 = NZ_JAMDGP010000040.1 Primary Assembly 16666 na i291_S42_L001_R1_001_contig_41 unplaced-scaffold na na JAMDGP010000041.1 = NZ_JAMDGP010000041.1 Primary Assembly 79656 na i291_S42_L001_R1_001_contig_42 unplaced-scaffold na na JAMDGP010000042.1 = NZ_JAMDGP010000042.1 Primary Assembly 63403 na i291_S42_L001_R1_001_contig_43 unplaced-scaffold na na JAMDGP010000043.1 = NZ_JAMDGP010000043.1 Primary Assembly 137248 na i291_S42_L001_R1_001_contig_44 unplaced-scaffold na na JAMDGP010000044.1 = NZ_JAMDGP010000044.1 Primary Assembly 62994 na i291_S42_L001_R1_001_contig_45 unplaced-scaffold na na JAMDGP010000045.1 = NZ_JAMDGP010000045.1 Primary Assembly 15609 na i291_S42_L001_R1_001_contig_46 unplaced-scaffold na na JAMDGP010000046.1 = NZ_JAMDGP010000046.1 Primary Assembly 7436 na i291_S42_L001_R1_001_contig_47 unplaced-scaffold na na JAMDGP010000047.1 = NZ_JAMDGP010000047.1 Primary Assembly 156051 na i291_S42_L001_R1_001_contig_48 unplaced-scaffold na na JAMDGP010000048.1 = NZ_JAMDGP010000048.1 Primary Assembly 37185 na i291_S42_L001_R1_001_contig_49 unplaced-scaffold na na JAMDGP010000049.1 = NZ_JAMDGP010000049.1 Primary Assembly 103744 na i291_S42_L001_R1_001_contig_50 unplaced-scaffold na na JAMDGP010000050.1 = NZ_JAMDGP010000050.1 Primary Assembly 9064 na i291_S42_L001_R1_001_contig_51 unplaced-scaffold na na JAMDGP010000051.1 = NZ_JAMDGP010000051.1 Primary Assembly 17682 na i291_S42_L001_R1_001_contig_52 unplaced-scaffold na na JAMDGP010000052.1 = NZ_JAMDGP010000052.1 Primary Assembly 105521 na i291_S42_L001_R1_001_contig_53 unplaced-scaffold na na JAMDGP010000053.1 = NZ_JAMDGP010000053.1 Primary Assembly 39098 na i291_S42_L001_R1_001_contig_54 unplaced-scaffold na na JAMDGP010000054.1 = NZ_JAMDGP010000054.1 Primary Assembly 33586 na i291_S42_L001_R1_001_contig_55 unplaced-scaffold na na JAMDGP010000055.1 = NZ_JAMDGP010000055.1 Primary Assembly 19805 na i291_S42_L001_R1_001_contig_56 unplaced-scaffold na na JAMDGP010000056.1 = NZ_JAMDGP010000056.1 Primary Assembly 34655 na i291_S42_L001_R1_001_contig_57 unplaced-scaffold na na JAMDGP010000057.1 = NZ_JAMDGP010000057.1 Primary Assembly 56275 na i291_S42_L001_R1_001_contig_58 unplaced-scaffold na na JAMDGP010000058.1 = NZ_JAMDGP010000058.1 Primary Assembly 122817 na i291_S42_L001_R1_001_contig_59 unplaced-scaffold na na JAMDGP010000059.1 = NZ_JAMDGP010000059.1 Primary Assembly 522 na i291_S42_L001_R1_001_contig_60 unplaced-scaffold na na JAMDGP010000060.1 = NZ_JAMDGP010000060.1 Primary Assembly 77206 na i291_S42_L001_R1_001_contig_61 unplaced-scaffold na na JAMDGP010000061.1 = NZ_JAMDGP010000061.1 Primary Assembly 69870 na i291_S42_L001_R1_001_contig_62 unplaced-scaffold na na JAMDGP010000062.1 = NZ_JAMDGP010000062.1 Primary Assembly 63815 na i291_S42_L001_R1_001_contig_63 unplaced-scaffold na na JAMDGP010000063.1 = NZ_JAMDGP010000063.1 Primary Assembly 47792 na i291_S42_L001_R1_001_contig_64 unplaced-scaffold na na JAMDGP010000064.1 = NZ_JAMDGP010000064.1 Primary Assembly 15783 na i291_S42_L001_R1_001_contig_65 unplaced-scaffold na na JAMDGP010000065.1 = NZ_JAMDGP010000065.1 Primary Assembly 19163 na i291_S42_L001_R1_001_contig_66 unplaced-scaffold na na JAMDGP010000066.1 = NZ_JAMDGP010000066.1 Primary Assembly 124635 na i291_S42_L001_R1_001_contig_67 unplaced-scaffold na na JAMDGP010000067.1 = NZ_JAMDGP010000067.1 Primary Assembly 10802 na i291_S42_L001_R1_001_contig_68 unplaced-scaffold na na JAMDGP010000068.1 = NZ_JAMDGP010000068.1 Primary Assembly 49713 na i291_S42_L001_R1_001_contig_69 unplaced-scaffold na na JAMDGP010000069.1 = NZ_JAMDGP010000069.1 Primary Assembly 43454 na i291_S42_L001_R1_001_contig_70 unplaced-scaffold na na JAMDGP010000070.1 = NZ_JAMDGP010000070.1 Primary Assembly 12733 na i291_S42_L001_R1_001_contig_71 unplaced-scaffold na na JAMDGP010000071.1 = NZ_JAMDGP010000071.1 Primary Assembly 42468 na i291_S42_L001_R1_001_contig_72 unplaced-scaffold na na JAMDGP010000072.1 = NZ_JAMDGP010000072.1 Primary Assembly 4537 na i291_S42_L001_R1_001_contig_73 unplaced-scaffold na na JAMDGP010000073.1 = NZ_JAMDGP010000073.1 Primary Assembly 9032 na i291_S42_L001_R1_001_contig_74 unplaced-scaffold na na JAMDGP010000074.1 = NZ_JAMDGP010000074.1 Primary Assembly 5494 na i291_S42_L001_R1_001_contig_75 unplaced-scaffold na na JAMDGP010000075.1 = NZ_JAMDGP010000075.1 Primary Assembly 38627 na i291_S42_L001_R1_001_contig_76 unplaced-scaffold na na JAMDGP010000076.1 = NZ_JAMDGP010000076.1 Primary Assembly 29461 na i291_S42_L001_R1_001_contig_77 unplaced-scaffold na na JAMDGP010000077.1 = NZ_JAMDGP010000077.1 Primary Assembly 1186 na i291_S42_L001_R1_001_contig_78 unplaced-scaffold na na JAMDGP010000078.1 = NZ_JAMDGP010000078.1 Primary Assembly 7300 na i291_S42_L001_R1_001_contig_79 unplaced-scaffold na na JAMDGP010000079.1 = NZ_JAMDGP010000079.1 Primary Assembly 734 na i291_S42_L001_R1_001_contig_80 unplaced-scaffold na na JAMDGP010000080.1 = NZ_JAMDGP010000080.1 Primary Assembly 628 na i291_S42_L001_R1_001_contig_81 unplaced-scaffold na na JAMDGP010000081.1 = NZ_JAMDGP010000081.1 Primary Assembly 735 na i291_S42_L001_R1_001_contig_82 unplaced-scaffold na na JAMDGP010000082.1 = NZ_JAMDGP010000082.1 Primary Assembly 3297 na i291_S42_L001_R1_001_contig_83 unplaced-scaffold na na JAMDGP010000083.1 = NZ_JAMDGP010000083.1 Primary Assembly 20589 na i291_S42_L001_R1_001_contig_84 unplaced-scaffold na na JAMDGP010000084.1 = NZ_JAMDGP010000084.1 Primary Assembly 10617 na i291_S42_L001_R1_001_contig_85 unplaced-scaffold na na JAMDGP010000085.1 = NZ_JAMDGP010000085.1 Primary Assembly 27681 na i291_S42_L001_R1_001_contig_86 unplaced-scaffold na na JAMDGP010000086.1 = NZ_JAMDGP010000086.1 Primary Assembly 7720 na i291_S42_L001_R1_001_contig_87 unplaced-scaffold na na JAMDGP010000087.1 = NZ_JAMDGP010000087.1 Primary Assembly 4144 na i291_S42_L001_R1_001_contig_88 unplaced-scaffold na na JAMDGP010000088.1 = NZ_JAMDGP010000088.1 Primary Assembly 3162 na i291_S42_L001_R1_001_contig_89 unplaced-scaffold na na JAMDGP010000089.1 = NZ_JAMDGP010000089.1 Primary Assembly 2383 na i291_S42_L001_R1_001_contig_90 unplaced-scaffold na na JAMDGP010000090.1 = NZ_JAMDGP010000090.1 Primary Assembly 11089 na i291_S42_L001_R1_001_contig_91 unplaced-scaffold na na JAMDGP010000091.1 = NZ_JAMDGP010000091.1 Primary Assembly 1185 na i291_S42_L001_R1_001_contig_92 unplaced-scaffold na na JAMDGP010000092.1 = NZ_JAMDGP010000092.1 Primary Assembly 1584 na i291_S42_L001_R1_001_contig_93 unplaced-scaffold na na JAMDGP010000093.1 = NZ_JAMDGP010000093.1 Primary Assembly 3152 na i291_S42_L001_R1_001_contig_94 unplaced-scaffold na na JAMDGP010000094.1 = NZ_JAMDGP010000094.1 Primary Assembly 980 na i291_S42_L001_R1_001_contig_95 unplaced-scaffold na na JAMDGP010000095.1 = NZ_JAMDGP010000095.1 Primary Assembly 7680 na i291_S42_L001_R1_001_contig_96 unplaced-scaffold na na JAMDGP010000096.1 = NZ_JAMDGP010000096.1 Primary Assembly 7099 na i291_S42_L001_R1_001_contig_97 unplaced-scaffold na na JAMDGP010000097.1 = NZ_JAMDGP010000097.1 Primary Assembly 10839 na i291_S42_L001_R1_001_contig_98 unplaced-scaffold na na JAMDGP010000098.1 = NZ_JAMDGP010000098.1 Primary Assembly 6284 na i291_S42_L001_R1_001_contig_99 unplaced-scaffold na na JAMDGP010000099.1 = NZ_JAMDGP010000099.1 Primary Assembly 6479 na i291_S42_L001_R1_001_contig_100 unplaced-scaffold na na JAMDGP010000100.1 = NZ_JAMDGP010000100.1 Primary Assembly 690 na i291_S42_L001_R1_001_contig_101 unplaced-scaffold na na JAMDGP010000101.1 = NZ_JAMDGP010000101.1 Primary Assembly 1235 na i291_S42_L001_R1_001_contig_102 unplaced-scaffold na na JAMDGP010000102.1 = NZ_JAMDGP010000102.1 Primary Assembly 920 na i291_S42_L001_R1_001_contig_103 unplaced-scaffold na na JAMDGP010000103.1 = NZ_JAMDGP010000103.1 Primary Assembly 853 na i291_S42_L001_R1_001_contig_104 unplaced-scaffold na na JAMDGP010000104.1 = NZ_JAMDGP010000104.1 Primary Assembly 866 na i291_S42_L001_R1_001_contig_105 unplaced-scaffold na na JAMDGP010000105.1 = NZ_JAMDGP010000105.1 Primary Assembly 2768 na i291_S42_L001_R1_001_contig_106 unplaced-scaffold na na JAMDGP010000106.1 = NZ_JAMDGP010000106.1 Primary Assembly 9635 na i291_S42_L001_R1_001_contig_107 unplaced-scaffold na na JAMDGP010000107.1 = NZ_JAMDGP010000107.1 Primary Assembly 3125 na i291_S42_L001_R1_001_contig_108 unplaced-scaffold na na JAMDGP010000108.1 = NZ_JAMDGP010000108.1 Primary Assembly 1054 na