# Assembly name: rPodRaf1.pri # Organism name: Podarcis raffonei (Aeolian wall lizard) # Infraspecific name: ecotype=La Canna islet # Isolate: rPodRaf1 # Sex: female # Taxid: 65483 # BioSample: SAMN28455423 # BioProject: PRJNA839511 # Submitter: Vertebrate Genomes Project # Date: 2022-12-27 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAPYJY01 # Assembly method: HiFiasm v. 0.16.1-r375; purge_dups v. 1.2.5; Bionano solve v. 3.6.1; Salsa v. 2.3 # Expected final version: no # Genome coverage: 31.05x # Sequencing technology: PacBio Sequel II HiFi; Bionano DLS; Arima Hi-C v2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_027172205.1 # RefSeq assembly accession: GCF_027172205.1 # RefSeq assembly and GenBank assemblies identical: yes # Linked assembly: GCA_027172095.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027172255.1 GCF_027172255.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM049750.1 = NC_070602.1 Primary Assembly 139138986 na SUPER_2 assembled-molecule 2 Chromosome CM049751.1 = NC_070603.1 Primary Assembly 127263675 na SUPER_3 assembled-molecule 3 Chromosome CM049752.1 = NC_070604.1 Primary Assembly 124660641 na SUPER_4 assembled-molecule 4 Chromosome CM049753.1 = NC_070605.1 Primary Assembly 108497525 na SUPER_5 assembled-molecule 5 Chromosome CM049754.1 = NC_070606.1 Primary Assembly 102317954 na SUPER_6 assembled-molecule 6 Chromosome CM049755.1 = NC_070607.1 Primary Assembly 100096178 na SUPER_7 assembled-molecule 7 Chromosome CM049756.1 = NC_070608.1 Primary Assembly 92543381 na SUPER_8 assembled-molecule 8 Chromosome CM049757.1 = NC_070609.1 Primary Assembly 93623253 na SUPER_9 assembled-molecule 9 Chromosome CM049758.1 = NC_070610.1 Primary Assembly 80976960 na SUPER_10 assembled-molecule 10 Chromosome CM049759.1 = NC_070611.1 Primary Assembly 79254795 na SUPER_11 assembled-molecule 11 Chromosome CM049760.1 = NC_070612.1 Primary Assembly 66434231 na SUPER_12 assembled-molecule 12 Chromosome CM049761.1 = NC_070613.1 Primary Assembly 61439401 na SUPER_13 assembled-molecule 13 Chromosome CM049762.1 = NC_070614.1 Primary Assembly 56248303 na SUPER_14 assembled-molecule 14 Chromosome CM049763.1 = NC_070615.1 Primary Assembly 53986714 na SUPER_15 assembled-molecule 15 Chromosome CM049764.1 = NC_070616.1 Primary Assembly 45100313 na SUPER_16 assembled-molecule 16 Chromosome CM049765.1 = NC_070617.1 Primary Assembly 42970794 na SUPER_17 assembled-molecule 17 Chromosome CM049766.1 = NC_070618.1 Primary Assembly 42074563 na SUPER_18 assembled-molecule 18 Chromosome CM049767.1 = NC_070619.1 Primary Assembly 13334018 na SUPER_W assembled-molecule W Chromosome CM049768.1 = NC_070620.1 Primary Assembly 31610000 na SUPER_Z assembled-molecule Z Chromosome CM049769.1 = NC_070621.1 Primary Assembly 51487686 na scaffold_32 unplaced-scaffold na na JAPYJY010000021.1 = NW_026518833.1 Primary Assembly 37849 na scaffold_33_ctg1 unplaced-scaffold na na JAPYJY010000023.1 = NW_026518834.1 Primary Assembly 10540 na scaffold_34_ctg1 unplaced-scaffold na na JAPYJY010000024.1 = NW_026518835.1 Primary Assembly 8553 na scaffold_35_ctg1 unplaced-scaffold na na JAPYJY010000025.1 = NW_026518836.1 Primary Assembly 7317 na scaffold_36_ctg1 unplaced-scaffold na na JAPYJY010000026.1 = NW_026518837.1 Primary Assembly 6473 na scaffold_37_ctg1 unplaced-scaffold na na JAPYJY010000027.1 = NW_026518838.1 Primary Assembly 1042 na scaffold_38 unplaced-scaffold na na JAPYJY010000022.1 = NW_026518839.1 Primary Assembly 358 na