# Assembly name: ASM2470399v1 # Organism name: Amycolatopsis iheyensis (high G+C Gram-positive bacteria) # Infraspecific name: strain=OK19-0408 # Taxid: 2945988 # BioSample: SAMN28556989 # BioProject: PRJNA839868 # Submitter: Mahidol University # Date: 2022-08-16 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAMXQV01 # Assembly method: Velvet v. 1.0.0 # Expected final version: yes # Genome coverage: 10.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_024703995.1 # RefSeq assembly accession: GCF_024703995.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024704005.1 GCF_024704005.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na JAMXQV010000001.1 = NZ_JAMXQV010000001.1 Primary Assembly 753473 na Scaffold2_1 unplaced-scaffold na na JAMXQV010000002.1 = NZ_JAMXQV010000002.1 Primary Assembly 744784 na Scaffold3_1 unplaced-scaffold na na JAMXQV010000003.1 = NZ_JAMXQV010000003.1 Primary Assembly 562756 na Scaffold4_1 unplaced-scaffold na na JAMXQV010000004.1 = NZ_JAMXQV010000004.1 Primary Assembly 507195 na Scaffold5_1 unplaced-scaffold na na JAMXQV010000005.1 = NZ_JAMXQV010000005.1 Primary Assembly 44981 na Scaffold5_2 unplaced-scaffold na na JAMXQV010000006.1 = NZ_JAMXQV010000006.1 Primary Assembly 444877 na Scaffold6_1 unplaced-scaffold na na JAMXQV010000007.1 = NZ_JAMXQV010000007.1 Primary Assembly 430306 na Scaffold7_1 unplaced-scaffold na na JAMXQV010000008.1 = NZ_JAMXQV010000008.1 Primary Assembly 423671 na Scaffold8_1 unplaced-scaffold na na JAMXQV010000009.1 = NZ_JAMXQV010000009.1 Primary Assembly 358598 na Scaffold9_1 unplaced-scaffold na na JAMXQV010000010.1 = NZ_JAMXQV010000010.1 Primary Assembly 47276 na Scaffold9_2 unplaced-scaffold na na JAMXQV010000011.1 = NZ_JAMXQV010000011.1 Primary Assembly 301490 na Scaffold10_1 unplaced-scaffold na na JAMXQV010000012.1 = NZ_JAMXQV010000012.1 Primary Assembly 334595 na Scaffold11_1 unplaced-scaffold na na JAMXQV010000013.1 = NZ_JAMXQV010000013.1 Primary Assembly 296001 na Scaffold12_1 unplaced-scaffold na na JAMXQV010000014.1 = NZ_JAMXQV010000014.1 Primary Assembly 272942 na Scaffold13_1 unplaced-scaffold na na JAMXQV010000015.1 = NZ_JAMXQV010000015.1 Primary Assembly 262239 na Scaffold14_1 unplaced-scaffold na na JAMXQV010000016.1 = NZ_JAMXQV010000016.1 Primary Assembly 253422 na Scaffold15_1 unplaced-scaffold na na JAMXQV010000017.1 = NZ_JAMXQV010000017.1 Primary Assembly 250154 na Scaffold16_1 unplaced-scaffold na na JAMXQV010000018.1 = NZ_JAMXQV010000018.1 Primary Assembly 230296 na Scaffold17_1 unplaced-scaffold na na JAMXQV010000019.1 = NZ_JAMXQV010000019.1 Primary Assembly 216260 na Scaffold18_1 unplaced-scaffold na na JAMXQV010000020.1 = NZ_JAMXQV010000020.1 Primary Assembly 205304 na Scaffold19_1 unplaced-scaffold na na JAMXQV010000021.1 = NZ_JAMXQV010000021.1 Primary Assembly 178419 na Scaffold20_1 unplaced-scaffold na na JAMXQV010000022.1 = NZ_JAMXQV010000022.1 Primary Assembly 178013 na Scaffold21_1 unplaced-scaffold na na JAMXQV010000023.1 = NZ_JAMXQV010000023.1 Primary Assembly 172253 na Scaffold22_1 unplaced-scaffold na na JAMXQV010000024.1 = NZ_JAMXQV010000024.1 Primary Assembly 169591 na Scaffold23_1 unplaced-scaffold na na JAMXQV010000025.1 = NZ_JAMXQV010000025.1 Primary Assembly 162940 na Scaffold24_1 unplaced-scaffold na na JAMXQV010000026.1 = NZ_JAMXQV010000026.1 Primary Assembly 162128 na Scaffold25_1 unplaced-scaffold na na JAMXQV010000027.1 = NZ_JAMXQV010000027.1 Primary Assembly 157400 na Scaffold26_1 unplaced-scaffold na na JAMXQV010000028.1 = NZ_JAMXQV010000028.1 Primary Assembly 154690 na Scaffold27_1 unplaced-scaffold na na JAMXQV010000029.1 = NZ_JAMXQV010000029.1 Primary Assembly 142434 na Scaffold28_1 unplaced-scaffold na na JAMXQV010000030.1 = NZ_JAMXQV010000030.1 Primary Assembly 135380 na Scaffold29_1 unplaced-scaffold na na JAMXQV010000031.1 = NZ_JAMXQV010000031.1 Primary Assembly 134178 na Scaffold30_1 unplaced-scaffold na na JAMXQV010000032.1 = NZ_JAMXQV010000032.1 Primary Assembly 131329 na Scaffold31_1 unplaced-scaffold na na JAMXQV010000033.1 = NZ_JAMXQV010000033.1 Primary Assembly 123290 na Scaffold32_1 unplaced-scaffold na na JAMXQV010000034.1 = NZ_JAMXQV010000034.1 Primary Assembly 122763 na Scaffold33_1 unplaced-scaffold na na JAMXQV010000035.1 = NZ_JAMXQV010000035.1 Primary Assembly 110869 na Scaffold34_1 unplaced-scaffold na na JAMXQV010000036.1 = NZ_JAMXQV010000036.1 Primary Assembly 99703 na Scaffold35_1 unplaced-scaffold na na JAMXQV010000037.1 = NZ_JAMXQV010000037.1 Primary Assembly 84391 na Scaffold36_1 unplaced-scaffold na na JAMXQV010000038.1 = NZ_JAMXQV010000038.1 Primary Assembly 82958 na Scaffold37_1 unplaced-scaffold na na JAMXQV010000039.1 = NZ_JAMXQV010000039.1 Primary Assembly 77889 na Scaffold38_1 unplaced-scaffold na na JAMXQV010000040.1 = NZ_JAMXQV010000040.1 Primary Assembly 74412 na Scaffold39_1 unplaced-scaffold na na JAMXQV010000041.1 = NZ_JAMXQV010000041.1 Primary Assembly 72424 na Scaffold40_1 unplaced-scaffold na na JAMXQV010000042.1 = NZ_JAMXQV010000042.1 Primary Assembly 71555 na Scaffold41_1 unplaced-scaffold na na JAMXQV010000043.1 = NZ_JAMXQV010000043.1 Primary Assembly 65142 na Scaffold42_1 unplaced-scaffold na na JAMXQV010000044.1 = NZ_JAMXQV010000044.1 Primary Assembly 61929 na Scaffold43_1 unplaced-scaffold na na JAMXQV010000045.1 = NZ_JAMXQV010000045.1 Primary Assembly 57362 na Scaffold44_1 unplaced-scaffold na na JAMXQV010000046.1 = NZ_JAMXQV010000046.1 Primary Assembly 54991 na Scaffold45_1 unplaced-scaffold na na JAMXQV010000047.1 = NZ_JAMXQV010000047.1 Primary Assembly 52126 na Scaffold46_1 unplaced-scaffold na na JAMXQV010000048.1 = NZ_JAMXQV010000048.1 Primary Assembly 50929 na Scaffold47_1 unplaced-scaffold na na JAMXQV010000049.1 = NZ_JAMXQV010000049.1 Primary Assembly 41801 na Scaffold48_1 unplaced-scaffold na na JAMXQV010000050.1 = NZ_JAMXQV010000050.1 Primary Assembly 40229 na Scaffold49_1 unplaced-scaffold na na JAMXQV010000051.1 = NZ_JAMXQV010000051.1 Primary Assembly 39747 na Scaffold50_1 unplaced-scaffold na na JAMXQV010000052.1 = NZ_JAMXQV010000052.1 Primary Assembly 33532 na Scaffold51_1 unplaced-scaffold na na JAMXQV010000053.1 = NZ_JAMXQV010000053.1 Primary Assembly 30635 na Scaffold52_1 unplaced-scaffold na na JAMXQV010000054.1 = NZ_JAMXQV010000054.1 Primary Assembly 25590 na Scaffold53_1 unplaced-scaffold na na JAMXQV010000055.1 = NZ_JAMXQV010000055.1 Primary Assembly 19398 na Scaffold54_1 unplaced-scaffold na na JAMXQV010000056.1 = NZ_JAMXQV010000056.1 Primary Assembly 18857 na Scaffold55_1 unplaced-scaffold na na JAMXQV010000057.1 = NZ_JAMXQV010000057.1 Primary Assembly 18424 na Scaffold56_1 unplaced-scaffold na na JAMXQV010000058.1 = NZ_JAMXQV010000058.1 Primary Assembly 13661 na Scaffold57_1 unplaced-scaffold na na JAMXQV010000059.1 = NZ_JAMXQV010000059.1 Primary Assembly 13575 na Scaffold58_1 unplaced-scaffold na na JAMXQV010000060.1 = NZ_JAMXQV010000060.1 Primary Assembly 13009 na Scaffold59_1 unplaced-scaffold na na JAMXQV010000061.1 = NZ_JAMXQV010000061.1 Primary Assembly 10748 na Scaffold60_1 unplaced-scaffold na na JAMXQV010000062.1 = NZ_JAMXQV010000062.1 Primary Assembly 6906 na Scaffold61_1 unplaced-scaffold na na JAMXQV010000063.1 = NZ_JAMXQV010000063.1 Primary Assembly 4961 na Scaffold62_1 unplaced-scaffold na na JAMXQV010000064.1 = NZ_JAMXQV010000064.1 Primary Assembly 4210 na Scaffold63_1 unplaced-scaffold na na JAMXQV010000065.1 = NZ_JAMXQV010000065.1 Primary Assembly 2760 na Scaffold64_1 unplaced-scaffold na na JAMXQV010000066.1 = NZ_JAMXQV010000066.1 Primary Assembly 2718 na Scaffold65_1 unplaced-scaffold na na JAMXQV010000067.1 = NZ_JAMXQV010000067.1 Primary Assembly 2560 na Scaffold66_1 unplaced-scaffold na na JAMXQV010000068.1 = NZ_JAMXQV010000068.1 Primary Assembly 1596 na Scaffold67_1 unplaced-scaffold na na JAMXQV010000069.1 = NZ_JAMXQV010000069.1 Primary Assembly 1552 na Scaffold68_1 unplaced-scaffold na na JAMXQV010000070.1 = NZ_JAMXQV010000070.1 Primary Assembly 1541 na Scaffold69_1 unplaced-scaffold na na JAMXQV010000071.1 = NZ_JAMXQV010000071.1 Primary Assembly 1462 na Scaffold70_1 unplaced-scaffold na na JAMXQV010000072.1 = NZ_JAMXQV010000072.1 Primary Assembly 1346 na Scaffold71_1 unplaced-scaffold na na JAMXQV010000073.1 = NZ_JAMXQV010000073.1 Primary Assembly 1302 na Scaffold72_1 unplaced-scaffold na na JAMXQV010000074.1 = NZ_JAMXQV010000074.1 Primary Assembly 1269 na Scaffold73_1 unplaced-scaffold na na JAMXQV010000075.1 = NZ_JAMXQV010000075.1 Primary Assembly 1136 na Scaffold74_1 unplaced-scaffold na na JAMXQV010000076.1 = NZ_JAMXQV010000076.1 Primary Assembly 1038 na Scaffold75_1 unplaced-scaffold na na JAMXQV010000077.1 = NZ_JAMXQV010000077.1 Primary Assembly 939 na