# Assembly name: ASM2451857v1 # Organism name: Methanothrix sp. (euryarchaeotes) # Isolate: LCB019-064 # Taxid: 90426 # BioSample: SAMN29855467 # BioProject: PRJNA859922 # Submitter: Montana State University # Date: 2022-08-03 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JANIHG01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 491.4x # Sequencing technology: Illumina NovaSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_024518575.1 # RefSeq assembly accession: GCF_024518575.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024518605.1 GCF_024518605.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1149_c1 unplaced-scaffold na na JANIHG010000061.1 = NZ_JANIHG010000061.1 Primary Assembly 4861 na scaffold_1149_c2 unplaced-scaffold na na JANIHG010000027.1 = NZ_JANIHG010000027.1 Primary Assembly 18889 na scaffold_1149_c3 unplaced-scaffold na na JANIHG010000038.1 = NZ_JANIHG010000038.1 Primary Assembly 13792 na scaffold_12163_c1 unplaced-scaffold na na JANIHG010000048.1 = NZ_JANIHG010000048.1 Primary Assembly 8513 na scaffold_12898_c1 unplaced-scaffold na na JANIHG010000058.1 = NZ_JANIHG010000058.1 Primary Assembly 6181 na scaffold_129_c1 unplaced-scaffold na na JANIHG010000051.1 = NZ_JANIHG010000051.1 Primary Assembly 7621 na scaffold_129_c2 unplaced-scaffold na na JANIHG010000015.1 = NZ_JANIHG010000015.1 Primary Assembly 36200 na scaffold_129_c3 unplaced-scaffold na na JANIHG010000007.1 = NZ_JANIHG010000007.1 Primary Assembly 69035 na scaffold_134_c1 unplaced-scaffold na na JANIHG010000001.1 = NZ_JANIHG010000001.1 Primary Assembly 97259 na scaffold_134_c2 unplaced-scaffold na na JANIHG010000064.1 = NZ_JANIHG010000064.1 Primary Assembly 4250 na scaffold_134_c3 unplaced-scaffold na na JANIHG010000062.1 = NZ_JANIHG010000062.1 Primary Assembly 4654 na scaffold_13500_c1 unplaced-scaffold na na JANIHG010000050.1 = NZ_JANIHG010000050.1 Primary Assembly 7940 na scaffold_1412_c1 unplaced-scaffold na na JANIHG010000016.1 = NZ_JANIHG010000016.1 Primary Assembly 33376 na scaffold_1465_c1 unplaced-scaffold na na JANIHG010000017.1 = NZ_JANIHG010000017.1 Primary Assembly 32441 na scaffold_14700_c1 unplaced-scaffold na na JANIHG010000052.1 = NZ_JANIHG010000052.1 Primary Assembly 7508 na scaffold_1496_c1 unplaced-scaffold na na JANIHG010000018.1 = NZ_JANIHG010000018.1 Primary Assembly 31992 na scaffold_1500_c1 unplaced-scaffold na na JANIHG010000019.1 = NZ_JANIHG010000019.1 Primary Assembly 31948 na scaffold_1671_c1 unplaced-scaffold na na JANIHG010000065.1 = NZ_JANIHG010000065.1 Primary Assembly 3999 na scaffold_1671_c2 unplaced-scaffold na na JANIHG010000021.1 = NZ_JANIHG010000021.1 Primary Assembly 25751 na scaffold_17667_c1 unplaced-scaffold na na JANIHG010000055.1 = NZ_JANIHG010000055.1 Primary Assembly 6649 na scaffold_194_c1 unplaced-scaffold na na JANIHG010000002.1 = NZ_JANIHG010000002.1 Primary Assembly 95770 na scaffold_2019_c1 unplaced-scaffold na na JANIHG010000043.1 = NZ_JANIHG010000043.1 Primary Assembly 11177 na scaffold_2019_c2 unplaced-scaffold na na JANIHG010000036.1 = NZ_JANIHG010000036.1 Primary Assembly 15494 na scaffold_21405_c1 unplaced-scaffold na na JANIHG010000059.1 = NZ_JANIHG010000059.1 Primary Assembly 5833 na scaffold_2201_c1 unplaced-scaffold na na JANIHG010000022.1 = NZ_JANIHG010000022.1 Primary Assembly 25311 na scaffold_2244_c1 unplaced-scaffold na na JANIHG010000023.1 = NZ_JANIHG010000023.1 Primary Assembly 25092 na scaffold_2328_c1 unplaced-scaffold na na JANIHG010000026.1 = NZ_JANIHG010000026.1 Primary Assembly 19759 na scaffold_2328_c2 unplaced-scaffold na na JANIHG010000063.1 = NZ_JANIHG010000063.1 Primary Assembly 4575 na scaffold_296_c1 unplaced-scaffold na na JANIHG010000005.1 = NZ_JANIHG010000005.1 Primary Assembly 80126 na scaffold_3073_c1 unplaced-scaffold na na JANIHG010000053.1 = NZ_JANIHG010000053.1 Primary Assembly 6977 na scaffold_3073_c2 unplaced-scaffold na na JANIHG010000054.1 = NZ_JANIHG010000054.1 Primary Assembly 6896 na scaffold_3073_c3 unplaced-scaffold na na JANIHG010000056.1 = NZ_JANIHG010000056.1 Primary Assembly 6423 na scaffold_322_c1 unplaced-scaffold na na JANIHG010000012.1 = NZ_JANIHG010000012.1 Primary Assembly 40030 na scaffold_322_c2 unplaced-scaffold na na JANIHG010000033.1 = NZ_JANIHG010000033.1 Primary Assembly 16554 na scaffold_322_c3 unplaced-scaffold na na JANIHG010000025.1 = NZ_JANIHG010000025.1 Primary Assembly 20376 na scaffold_3591_c1 unplaced-scaffold na na JANIHG010000028.1 = NZ_JANIHG010000028.1 Primary Assembly 18562 na scaffold_3614_c1 unplaced-scaffold na na JANIHG010000029.1 = NZ_JANIHG010000029.1 Primary Assembly 18485 na scaffold_3753_c1 unplaced-scaffold na na JANIHG010000030.1 = NZ_JANIHG010000030.1 Primary Assembly 18061 na scaffold_37549_c1 unplaced-scaffold na na JANIHG010000066.1 = NZ_JANIHG010000066.1 Primary Assembly 3942 na scaffold_3824_c1 unplaced-scaffold na na JANIHG010000039.1 = NZ_JANIHG010000039.1 Primary Assembly 13762 na scaffold_3824_c2 unplaced-scaffold na na JANIHG010000067.1 = NZ_JANIHG010000067.1 Primary Assembly 3939 na scaffold_4129_c1 unplaced-scaffold na na JANIHG010000031.1 = NZ_JANIHG010000031.1 Primary Assembly 16939 na scaffold_4223_c1 unplaced-scaffold na na JANIHG010000032.1 = NZ_JANIHG010000032.1 Primary Assembly 16701 na scaffold_43626_c1 unplaced-scaffold na na JANIHG010000068.1 = NZ_JANIHG010000068.1 Primary Assembly 3532 na scaffold_4461_c1 unplaced-scaffold na na JANIHG010000034.1 = NZ_JANIHG010000034.1 Primary Assembly 16124 na scaffold_4549_c1 unplaced-scaffold na na JANIHG010000071.1 = NZ_JANIHG010000071.1 Primary Assembly 2411 na scaffold_4549_c2 unplaced-scaffold na na JANIHG010000040.1 = NZ_JANIHG010000040.1 Primary Assembly 13432 na scaffold_4585_c1 unplaced-scaffold na na JANIHG010000035.1 = NZ_JANIHG010000035.1 Primary Assembly 15860 na scaffold_49043_c1 unplaced-scaffold na na JANIHG010000069.1 = NZ_JANIHG010000069.1 Primary Assembly 3238 na scaffold_5028_c1 unplaced-scaffold na na JANIHG010000037.1 = NZ_JANIHG010000037.1 Primary Assembly 14956 na scaffold_529_c1 unplaced-scaffold na na JANIHG010000013.1 = NZ_JANIHG010000013.1 Primary Assembly 39886 na scaffold_529_c2 unplaced-scaffold na na JANIHG010000024.1 = NZ_JANIHG010000024.1 Primary Assembly 20722 na scaffold_54_c1 unplaced-scaffold na na JANIHG010000006.1 = NZ_JANIHG010000006.1 Primary Assembly 73044 na scaffold_54_c2 unplaced-scaffold na na JANIHG010000004.1 = NZ_JANIHG010000004.1 Primary Assembly 82253 na scaffold_54_c3 unplaced-scaffold na na JANIHG010000049.1 = NZ_JANIHG010000049.1 Primary Assembly 8012 na scaffold_63373_c1 unplaced-scaffold na na JANIHG010000070.1 = NZ_JANIHG010000070.1 Primary Assembly 2664 na scaffold_6728_c1 unplaced-scaffold na na JANIHG010000041.1 = NZ_JANIHG010000041.1 Primary Assembly 12472 na scaffold_676_c1 unplaced-scaffold na na JANIHG010000008.1 = NZ_JANIHG010000008.1 Primary Assembly 51944 na scaffold_701_c1 unplaced-scaffold na na JANIHG010000009.1 = NZ_JANIHG010000009.1 Primary Assembly 50593 na scaffold_7055_c1 unplaced-scaffold na na JANIHG010000042.1 = NZ_JANIHG010000042.1 Primary Assembly 12108 na scaffold_72022_c1 unplaced-scaffold na na JANIHG010000072.1 = NZ_JANIHG010000072.1 Primary Assembly 2410 na scaffold_7569_c1 unplaced-scaffold na na JANIHG010000057.1 = NZ_JANIHG010000057.1 Primary Assembly 6389 na scaffold_7569_c2 unplaced-scaffold na na JANIHG010000060.1 = NZ_JANIHG010000060.1 Primary Assembly 5120 na scaffold_8109_c1 unplaced-scaffold na na JANIHG010000044.1 = NZ_JANIHG010000044.1 Primary Assembly 11109 na scaffold_8141_c1 unplaced-scaffold na na JANIHG010000045.1 = NZ_JANIHG010000045.1 Primary Assembly 11083 na scaffold_838_c1 unplaced-scaffold na na JANIHG010000010.1 = NZ_JANIHG010000010.1 Primary Assembly 44858 na scaffold_8853_c1 unplaced-scaffold na na JANIHG010000046.1 = NZ_JANIHG010000046.1 Primary Assembly 10488 na scaffold_948_c2 unplaced-scaffold na na JANIHG010000014.1 = NZ_JANIHG010000014.1 Primary Assembly 37679 na scaffold_952_c1 unplaced-scaffold na na JANIHG010000011.1 = NZ_JANIHG010000011.1 Primary Assembly 42048 na scaffold_99_c1 unplaced-scaffold na na JANIHG010000020.1 = NZ_JANIHG010000020.1 Primary Assembly 29915 na scaffold_99_c2 unplaced-scaffold na na JANIHG010000047.1 = NZ_JANIHG010000047.1 Primary Assembly 10284 na scaffold_99_c3 unplaced-scaffold na na JANIHG010000003.1 = NZ_JANIHG010000003.1 Primary Assembly 84570 na