# Assembly name: CAIQ.LM.1 # Organism name: Plenodomus lingam (blackleg of rapeseed fungus) # Infraspecific name: strain=CAN1 # Taxid: 5022 # BioSample: SAMN15948182 # BioProject: PRJNA660251 # Submitter: Chinese Academy of Inspection and Quarantine # Date: 2022-02-18 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JACTNS01 # Assembly method: MaSuRCA v. 3.3.5 # Expected final version: yes # Genome coverage: 323x # Sequencing technology: Illumina HiSeq; Oxford Nanopore MinION # RefSeq category: Representative Genome # GenBank assembly accession: GCA_022343315.1 # RefSeq assembly accession: GCF_022343315.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_022343335.1 GCF_022343335.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name contig_1 unplaced-scaffold na na JACTNS010000001.1 = NW_027093927.1 Primary Assembly 2181330 na contig_10 unplaced-scaffold na na JACTNS010000002.1 = NW_027093928.1 Primary Assembly 7024 na contig_11 unplaced-scaffold na na JACTNS010000003.1 = NW_027093929.1 Primary Assembly 2754474 na contig_12 unplaced-scaffold na na JACTNS010000004.1 = NW_027093930.1 Primary Assembly 1183690 na contig_13 unplaced-scaffold na na JACTNS010000005.1 = NW_027093931.1 Primary Assembly 1539416 na contig_14 unplaced-scaffold na na JACTNS010000006.1 = NW_027093932.1 Primary Assembly 3012564 na contig_15 unplaced-scaffold na na JACTNS010000007.1 = NW_027093933.1 Primary Assembly 56954 na contig_17 unplaced-scaffold na na JACTNS010000008.1 = NW_027093934.1 Primary Assembly 1465635 na contig_18 unplaced-scaffold na na JACTNS010000009.1 = NW_027093935.1 Primary Assembly 1977794 na contig_19 unplaced-scaffold na na JACTNS010000010.1 = NW_027093936.1 Primary Assembly 2687687 na contig_2 unplaced-scaffold na na JACTNS010000011.1 = NW_027093937.1 Primary Assembly 535948 na contig_21 unplaced-scaffold na na JACTNS010000012.1 = NW_027093938.1 Primary Assembly 1508089 na contig_22 unplaced-scaffold na na JACTNS010000013.1 = NW_027093939.1 Primary Assembly 1138250 na contig_23 unplaced-scaffold na na JACTNS010000014.1 = NW_027093940.1 Primary Assembly 1696489 na contig_26 unplaced-scaffold na na JACTNS010000015.1 = NW_027093941.1 Primary Assembly 2386305 na contig_27 unplaced-scaffold na na JACTNS010000016.1 = NW_027093942.1 Primary Assembly 1347844 na contig_28 unplaced-scaffold na na JACTNS010000017.1 = NW_027093943.1 Primary Assembly 13538 na contig_3 unplaced-scaffold na na JACTNS010000018.1 = NW_027093944.1 Primary Assembly 3320749 na contig_30 unplaced-scaffold na na JACTNS010000019.1 = NW_027093945.1 Primary Assembly 619163 na contig_32 unplaced-scaffold na na JACTNS010000020.1 = NW_027093946.1 Primary Assembly 158130 na contig_33 unplaced-scaffold na na JACTNS010000021.1 = NW_027093947.1 Primary Assembly 2554 na contig_34 unplaced-scaffold na na JACTNS010000022.1 = NW_027093948.1 Primary Assembly 8108 na contig_35 unplaced-scaffold na na JACTNS010000023.1 = NW_027093949.1 Primary Assembly 372496 na contig_37 unplaced-scaffold na na JACTNS010000024.1 = NW_027093950.1 Primary Assembly 96406 na contig_38 unplaced-scaffold na na JACTNS010000025.1 = NW_027093951.1 Primary Assembly 11057 na contig_4 unplaced-scaffold na na JACTNS010000026.1 = NW_027093952.1 Primary Assembly 5539 na contig_42 unplaced-scaffold na na JACTNS010000027.1 = NW_027093953.1 Primary Assembly 721 na contig_43 unplaced-scaffold na na JACTNS010000028.1 = NW_027093954.1 Primary Assembly 12132 na contig_44 unplaced-scaffold na na JACTNS010000029.1 = NW_027093955.1 Primary Assembly 338773 na contig_49 unplaced-scaffold na na JACTNS010000030.1 = NW_027093956.1 Primary Assembly 4089 na contig_5 unplaced-scaffold na na JACTNS010000031.1 = NW_027093957.1 Primary Assembly 1970339 na contig_50 unplaced-scaffold na na JACTNS010000032.1 = NW_027093958.1 Primary Assembly 20383 na contig_51 unplaced-scaffold na na JACTNS010000033.1 = NW_027093959.1 Primary Assembly 29878 na contig_52 unplaced-scaffold na na JACTNS010000034.1 = NW_027093960.1 Primary Assembly 12088 na contig_53 unplaced-scaffold na na JACTNS010000035.1 = NW_027093961.1 Primary Assembly 30478 na contig_54 unplaced-scaffold na na JACTNS010000036.1 = NW_027093962.1 Primary Assembly 57699 na contig_56 unplaced-scaffold na na JACTNS010000037.1 = NW_027093963.1 Primary Assembly 1643 na contig_57 unplaced-scaffold na na JACTNS010000038.1 = NW_027093964.1 Primary Assembly 3641 na contig_59 unplaced-scaffold na na JACTNS010000039.1 = NW_027093965.1 Primary Assembly 28285 na contig_6 unplaced-scaffold na na JACTNS010000040.1 = NW_027093966.1 Primary Assembly 1842542 na contig_62 unplaced-scaffold na na JACTNS010000041.1 = NW_027093967.1 Primary Assembly 6712 na contig_63 unplaced-scaffold na na JACTNS010000042.1 = NW_027093968.1 Primary Assembly 2675 na contig_65 unplaced-scaffold na na JACTNS010000043.1 = NW_027093969.1 Primary Assembly 28235 na contig_67 unplaced-scaffold na na JACTNS010000044.1 = NW_027093970.1 Primary Assembly 45918 na contig_7 unplaced-scaffold na na JACTNS010000045.1 = NW_027093971.1 Primary Assembly 864816 na contig_8 unplaced-scaffold na na JACTNS010000046.1 = NW_027093972.1 Primary Assembly 1488123 na contig_9 unplaced-scaffold na na JACTNS010000047.1 = NW_027093973.1 Primary Assembly 1894039 na scaffold_20 unplaced-scaffold na na JACTNS010000048.1 = NW_027093974.1 Primary Assembly 3267390 na