# Assembly name: T.mel.1 # Organism name: Trypanosoma melophagium (kinetoplastids) # Infraspecific name: ecotype=St. Kilda # Isolate: St. Kilda # Taxid: 715481 # BioSample: SAMN23701209 # BioProject: PRJNA786535 # Submitter: University of Edinburgh # Date: 2022-02-08 # Assembly type: haploid # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAJSEB01 # Assembly method: Wtdbg2 v. 13/05/2021 # Expected final version: yes # Genome coverage: 225.0x # Sequencing technology: Oxford Nanopore MinION; DNBseq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_022059095.1 # RefSeq assembly accession: GCF_022059095.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_022059255.1 GCF_022059255.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name ctg1segment0 unplaced-scaffold na na JAJSEB010000001.1 = NW_027125132.1 Primary Assembly 1196935 na ctg1segment1 unplaced-scaffold na na JAJSEB010000002.1 = NW_027125133.1 Primary Assembly 5186 na ctg1segment2 unplaced-scaffold na na JAJSEB010000003.1 = NW_027125134.1 Primary Assembly 67041 na ctg10segment0 unplaced-scaffold na na JAJSEB010000004.1 = NW_027125135.1 Primary Assembly 117947 na ctg10segment3 unplaced-scaffold na na JAJSEB010000005.1 = NW_027125136.1 Primary Assembly 396957 na ctg11segment0 unplaced-scaffold na na JAJSEB010000006.1 = NW_027125137.1 Primary Assembly 575356 na ctg12segment0 unplaced-scaffold na na JAJSEB010000007.1 = NW_027125138.1 Primary Assembly 508159 na ctg13segment0 unplaced-scaffold na na JAJSEB010000008.1 = NW_027125139.1 Primary Assembly 277721 na ctg13segment2 unplaced-scaffold na na JAJSEB010000009.1 = NW_027125140.1 Primary Assembly 228061 na ctg14segment0 unplaced-scaffold na na JAJSEB010000010.1 = NW_027125141.1 Primary Assembly 66225 na ctg14segment1 unplaced-scaffold na na JAJSEB010000011.1 = NW_027125142.1 Primary Assembly 454233 na ctg15segment0 unplaced-scaffold na na JAJSEB010000012.1 = NW_027125143.1 Primary Assembly 495806 na ctg16segment0 unplaced-scaffold na na JAJSEB010000013.1 = NW_027125144.1 Primary Assembly 498368 na ctg17segment0 unplaced-scaffold na na JAJSEB010000014.1 = NW_027125145.1 Primary Assembly 440342 na ctg17segment1 unplaced-scaffold na na JAJSEB010000015.1 = NW_027125146.1 Primary Assembly 62702 na ctg18segment0 unplaced-scaffold na na JAJSEB010000016.1 = NW_027125147.1 Primary Assembly 505851 na ctg19segment0 unplaced-scaffold na na JAJSEB010000017.1 = NW_027125148.1 Primary Assembly 469011 na ctg2segment0 unplaced-scaffold na na JAJSEB010000018.1 = NW_027125149.1 Primary Assembly 1230212 na ctg20segment0 unplaced-scaffold na na JAJSEB010000019.1 = NW_027125150.1 Primary Assembly 470878 na ctg21segment0 unplaced-scaffold na na JAJSEB010000020.1 = NW_027125151.1 Primary Assembly 470206 na ctg22segment0 unplaced-scaffold na na JAJSEB010000021.1 = NW_027125152.1 Primary Assembly 669304 na ctg23segment0 unplaced-scaffold na na JAJSEB010000022.1 = NW_027125153.1 Primary Assembly 439466 na ctg24segment0 unplaced-scaffold na na JAJSEB010000023.1 = NW_027125154.1 Primary Assembly 85492 na ctg24segment1 unplaced-scaffold na na JAJSEB010000024.1 = NW_027125155.1 Primary Assembly 578531 na ctg25segment0 unplaced-scaffold na na JAJSEB010000025.1 = NW_027125156.1 Primary Assembly 393241 na ctg26segment0 unplaced-scaffold na na JAJSEB010000026.1 = NW_027125157.1 Primary Assembly 711991 na ctg27segment0 unplaced-scaffold na na JAJSEB010000027.1 = NW_027125158.1 Primary Assembly 529518 na ctg28segment0 unplaced-scaffold na na JAJSEB010000028.1 = NW_027125159.1 Primary Assembly 297302 na ctg29segment0 unplaced-scaffold na na JAJSEB010000029.1 = NW_027125160.1 Primary Assembly 414196 na ctg29segment1 unplaced-scaffold na na JAJSEB010000030.1 = NW_027125161.1 Primary Assembly 251894 na ctg3segment0 unplaced-scaffold na na JAJSEB010000031.1 = NW_027125162.1 Primary Assembly 1073268 na ctg30segment0 unplaced-scaffold na na JAJSEB010000032.1 = NW_027125163.1 Primary Assembly 496158 na ctg31segment0 unplaced-scaffold na na JAJSEB010000033.1 = NW_027125164.1 Primary Assembly 274920 na ctg31segment1 unplaced-scaffold na na JAJSEB010000034.1 = NW_027125165.1 Primary Assembly 23996 na ctg32segment0 unplaced-scaffold na na JAJSEB010000035.1 = NW_027125166.1 Primary Assembly 260215 na ctg33segment0 unplaced-scaffold na na JAJSEB010000036.1 = NW_027125167.1 Primary Assembly 358392 na ctg33segment1 unplaced-scaffold na na JAJSEB010000037.1 = NW_027125168.1 Primary Assembly 15565 na ctg33segment2 unplaced-scaffold na na JAJSEB010000038.1 = NW_027125169.1 Primary Assembly 13339 na ctg33segment3 unplaced-scaffold na na JAJSEB010000039.1 = NW_027125170.1 Primary Assembly 41229 na ctg34segment0 unplaced-scaffold na na JAJSEB010000040.1 = NW_027125171.1 Primary Assembly 364730 na ctg35segment0 unplaced-scaffold na na JAJSEB010000041.1 = NW_027125172.1 Primary Assembly 463299 na ctg36segment0 unplaced-scaffold na na JAJSEB010000042.1 = NW_027125173.1 Primary Assembly 239365 na ctg37segment0 unplaced-scaffold na na JAJSEB010000043.1 = NW_027125174.1 Primary Assembly 426730 na ctg38segment0 unplaced-scaffold na na JAJSEB010000044.1 = NW_027125175.1 Primary Assembly 58009 na ctg38segment1 unplaced-scaffold na na JAJSEB010000045.1 = NW_027125176.1 Primary Assembly 261277 na ctg39segment0 unplaced-scaffold na na JAJSEB010000046.1 = NW_027125177.1 Primary Assembly 89838 na ctg4segment0 unplaced-scaffold na na JAJSEB010000047.1 = NW_027125178.1 Primary Assembly 139868 na ctg4segment1 unplaced-scaffold na na JAJSEB010000048.1 = NW_027125179.1 Primary Assembly 899351 na ctg40segment0 unplaced-scaffold na na JAJSEB010000049.1 = NW_027125180.1 Primary Assembly 65023 na ctg41segment0 unplaced-scaffold na na JAJSEB010000050.1 = NW_027125181.1 Primary Assembly 53788 na ctg42segment0 unplaced-scaffold na na JAJSEB010000051.1 = NW_027125182.1 Primary Assembly 36913 na ctg43segment0 unplaced-scaffold na na JAJSEB010000052.1 = NW_027125183.1 Primary Assembly 32500 na ctg45segment0 unplaced-scaffold na na JAJSEB010000053.1 = NW_027125184.1 Primary Assembly 5592 na ctg47segment0 unplaced-scaffold na na JAJSEB010000054.1 = NW_027125185.1 Primary Assembly 8682 na ctg49segment0 unplaced-scaffold na na JAJSEB010000055.1 = NW_027125186.1 Primary Assembly 7753 na ctg5segment0 unplaced-scaffold na na JAJSEB010000056.1 = NW_027125187.1 Primary Assembly 918724 na ctg51segment0 unplaced-scaffold na na JAJSEB010000057.1 = NW_027125188.1 Primary Assembly 37449 na ctg6segment0 unplaced-scaffold na na JAJSEB010000058.1 = NW_027125189.1 Primary Assembly 920200 na ctg7segment0 unplaced-scaffold na na JAJSEB010000059.1 = NW_027125190.1 Primary Assembly 416597 na ctg7segment1 unplaced-scaffold na na JAJSEB010000060.1 = NW_027125191.1 Primary Assembly 739887 na ctg8segment0 unplaced-scaffold na na JAJSEB010000061.1 = NW_027125192.1 Primary Assembly 454998 na ctg8segment1 unplaced-scaffold na na JAJSEB010000062.1 = NW_027125193.1 Primary Assembly 129690 na ctg9segment0 unplaced-scaffold na na JAJSEB010000063.1 = NW_027125194.1 Primary Assembly 999568 na ctg9segment1 unplaced-scaffold na na JAJSEB010000064.1 = NW_027125195.1 Primary Assembly 68673 na