# Assembly name: R1 # Organism name: Methanothrix sp. (euryarchaeotes) # Isolate: R1-B15.1 # Taxid: 90426 # BioSample: SAMN16056042 # BioProject: PRJNA655520 # Submitter: University of California, Berkeley # Date: 2021-05-21 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAHDMI01 # Assembly method: MEGAHIT v. V1.1.2 # Expected final version: yes # Genome coverage: 26.56236833x # Sequencing technology: Illumina HiSeq # Excluded from RefSeq: derived from metagenome # GenBank assembly accession: GCA_018436085.1 # RefSeq assembly accession: GCF_018436085.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018436115.1 GCF_018436115.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name k141_43114 unplaced-scaffold na na JAHDMI010000001.1 = NZ_JAHDMI010000001.1 Primary Assembly 103175 na k141_43631 unplaced-scaffold na na JAHDMI010000002.1 = NZ_JAHDMI010000002.1 Primary Assembly 6435 na k141_29136 unplaced-scaffold na na JAHDMI010000003.1 = NZ_JAHDMI010000003.1 Primary Assembly 52337 na k141_314 unplaced-scaffold na na JAHDMI010000004.1 = NZ_JAHDMI010000004.1 Primary Assembly 1564 na k141_57554 unplaced-scaffold na na JAHDMI010000005.1 = NZ_JAHDMI010000005.1 Primary Assembly 17061 na k141_95486 unplaced-scaffold na na JAHDMI010000006.1 = NZ_JAHDMI010000006.1 Primary Assembly 74423 na k141_32610 unplaced-scaffold na na JAHDMI010000007.1 = NZ_JAHDMI010000007.1 Primary Assembly 15937 na k141_43389 unplaced-scaffold na na JAHDMI010000008.1 = NZ_JAHDMI010000008.1 Primary Assembly 50642 na k141_84908 unplaced-scaffold na na JAHDMI010000009.1 = NZ_JAHDMI010000009.1 Primary Assembly 12182 na k141_7108 unplaced-scaffold na na JAHDMI010000010.1 = NZ_JAHDMI010000010.1 Primary Assembly 41294 na k141_4703 unplaced-scaffold na na JAHDMI010000011.1 = NZ_JAHDMI010000011.1 Primary Assembly 46283 na k141_96864 unplaced-scaffold na na JAHDMI010000012.1 = NZ_JAHDMI010000012.1 Primary Assembly 1931 na k141_8961 unplaced-scaffold na na JAHDMI010000013.1 = NZ_JAHDMI010000013.1 Primary Assembly 85323 na k141_37937 unplaced-scaffold na na JAHDMI010000014.1 = NZ_JAHDMI010000014.1 Primary Assembly 108765 na k141_14398 unplaced-scaffold na na JAHDMI010000015.1 = NZ_JAHDMI010000015.1 Primary Assembly 28594 na k141_51725 unplaced-scaffold na na JAHDMI010000016.1 = NZ_JAHDMI010000016.1 Primary Assembly 63304 na k141_58457 unplaced-scaffold na na JAHDMI010000017.1 = NZ_JAHDMI010000017.1 Primary Assembly 63452 na k141_46854 unplaced-scaffold na na JAHDMI010000018.1 = NZ_JAHDMI010000018.1 Primary Assembly 53679 na k141_51910 unplaced-scaffold na na JAHDMI010000019.1 = NZ_JAHDMI010000019.1 Primary Assembly 84443 na k141_89914 unplaced-scaffold na na JAHDMI010000020.1 = NZ_JAHDMI010000020.1 Primary Assembly 5156 na k141_90862 unplaced-scaffold na na JAHDMI010000021.1 = NZ_JAHDMI010000021.1 Primary Assembly 31638 na k141_34071 unplaced-scaffold na na JAHDMI010000022.1 = NZ_JAHDMI010000022.1 Primary Assembly 47596 na k141_60515 unplaced-scaffold na na JAHDMI010000023.1 = NZ_JAHDMI010000023.1 Primary Assembly 17210 na k141_64198 unplaced-scaffold na na JAHDMI010000024.1 = NZ_JAHDMI010000024.1 Primary Assembly 28089 na k141_30734 unplaced-scaffold na na JAHDMI010000025.1 = NZ_JAHDMI010000025.1 Primary Assembly 4630 na k141_2069 unplaced-scaffold na na JAHDMI010000026.1 = NZ_JAHDMI010000026.1 Primary Assembly 2017 na k141_15388 unplaced-scaffold na na JAHDMI010000027.1 = NZ_JAHDMI010000027.1 Primary Assembly 23350 na k141_51361 unplaced-scaffold na na JAHDMI010000028.1 = NZ_JAHDMI010000028.1 Primary Assembly 20509 na k141_32046 unplaced-scaffold na na JAHDMI010000029.1 = NZ_JAHDMI010000029.1 Primary Assembly 11212 na k141_90118 unplaced-scaffold na na JAHDMI010000030.1 = NZ_JAHDMI010000030.1 Primary Assembly 2904 na k141_48260 unplaced-scaffold na na JAHDMI010000031.1 = NZ_JAHDMI010000031.1 Primary Assembly 1469 na k141_74178 unplaced-scaffold na na JAHDMI010000032.1 = NZ_JAHDMI010000032.1 Primary Assembly 58476 na k141_84345 unplaced-scaffold na na JAHDMI010000033.1 = NZ_JAHDMI010000033.1 Primary Assembly 65402 na k141_96297 unplaced-scaffold na na JAHDMI010000034.1 = NZ_JAHDMI010000034.1 Primary Assembly 4721 na k141_29468 unplaced-scaffold na na JAHDMI010000035.1 = NZ_JAHDMI010000035.1 Primary Assembly 26141 na k141_51626 unplaced-scaffold na na JAHDMI010000036.1 = NZ_JAHDMI010000036.1 Primary Assembly 54447 na k141_23125 unplaced-scaffold na na JAHDMI010000037.1 = NZ_JAHDMI010000037.1 Primary Assembly 20312 na k141_53901 unplaced-scaffold na na JAHDMI010000038.1 = NZ_JAHDMI010000038.1 Primary Assembly 30472 na k141_50349 unplaced-scaffold na na JAHDMI010000039.1 = NZ_JAHDMI010000039.1 Primary Assembly 34986 na k141_40139 unplaced-scaffold na na JAHDMI010000040.1 = NZ_JAHDMI010000040.1 Primary Assembly 44912 na k141_35757 unplaced-scaffold na na JAHDMI010000041.1 = NZ_JAHDMI010000041.1 Primary Assembly 4569 na k141_74640 unplaced-scaffold na na JAHDMI010000042.1 = NZ_JAHDMI010000042.1 Primary Assembly 68200 na k141_57370 unplaced-scaffold na na JAHDMI010000043.1 = NZ_JAHDMI010000043.1 Primary Assembly 24485 na k141_53959 unplaced-scaffold na na JAHDMI010000044.1 = NZ_JAHDMI010000044.1 Primary Assembly 4865 na k141_40242 unplaced-scaffold na na JAHDMI010000045.1 = NZ_JAHDMI010000045.1 Primary Assembly 5195 na k141_49786 unplaced-scaffold na na JAHDMI010000046.1 = NZ_JAHDMI010000046.1 Primary Assembly 26273 na k141_87246 unplaced-scaffold na na JAHDMI010000047.1 = NZ_JAHDMI010000047.1 Primary Assembly 30953 na k141_46737 unplaced-scaffold na na JAHDMI010000048.1 = NZ_JAHDMI010000048.1 Primary Assembly 7336 na k141_86187 unplaced-scaffold na na JAHDMI010000049.1 = NZ_JAHDMI010000049.1 Primary Assembly 59758 na k141_77728 unplaced-scaffold na na JAHDMI010000050.1 = NZ_JAHDMI010000050.1 Primary Assembly 12278 na k141_36060 unplaced-scaffold na na JAHDMI010000051.1 = NZ_JAHDMI010000051.1 Primary Assembly 15914 na k141_40783 unplaced-scaffold na na JAHDMI010000052.1 = NZ_JAHDMI010000052.1 Primary Assembly 17169 na k141_95960 unplaced-scaffold na na JAHDMI010000053.1 = NZ_JAHDMI010000053.1 Primary Assembly 5753 na k141_55133 unplaced-scaffold na na JAHDMI010000054.1 = NZ_JAHDMI010000054.1 Primary Assembly 16391 na k141_24655 unplaced-scaffold na na JAHDMI010000055.1 = NZ_JAHDMI010000055.1 Primary Assembly 2216 na k141_23569 unplaced-scaffold na na JAHDMI010000056.1 = NZ_JAHDMI010000056.1 Primary Assembly 2053 na k141_71844 unplaced-scaffold na na JAHDMI010000057.1 = NZ_JAHDMI010000057.1 Primary Assembly 15232 na k141_11029 unplaced-scaffold na na JAHDMI010000058.1 = NZ_JAHDMI010000058.1 Primary Assembly 7274 na k141_52435 unplaced-scaffold na na JAHDMI010000059.1 = NZ_JAHDMI010000059.1 Primary Assembly 9357 na k141_85998 unplaced-scaffold na na JAHDMI010000060.1 = NZ_JAHDMI010000060.1 Primary Assembly 12946 na k141_33451 unplaced-scaffold na na JAHDMI010000061.1 = NZ_JAHDMI010000061.1 Primary Assembly 4599 na k141_13763 unplaced-scaffold na na JAHDMI010000062.1 = NZ_JAHDMI010000062.1 Primary Assembly 27902 na k141_41925 unplaced-scaffold na na JAHDMI010000063.1 = NZ_JAHDMI010000063.1 Primary Assembly 7252 na k141_23235 unplaced-scaffold na na JAHDMI010000064.1 = NZ_JAHDMI010000064.1 Primary Assembly 8245 na k141_25214 unplaced-scaffold na na JAHDMI010000065.1 = NZ_JAHDMI010000065.1 Primary Assembly 3503 na k141_52588 unplaced-scaffold na na JAHDMI010000066.1 = NZ_JAHDMI010000066.1 Primary Assembly 25727 na k141_61647 unplaced-scaffold na na JAHDMI010000067.1 = NZ_JAHDMI010000067.1 Primary Assembly 33514 na k141_89987 unplaced-scaffold na na JAHDMI010000068.1 = NZ_JAHDMI010000068.1 Primary Assembly 21235 na k141_30689 unplaced-scaffold na na JAHDMI010000069.1 = NZ_JAHDMI010000069.1 Primary Assembly 1721 na k141_35035 unplaced-scaffold na na JAHDMI010000070.1 = NZ_JAHDMI010000070.1 Primary Assembly 39465 na k141_25568 unplaced-scaffold na na JAHDMI010000071.1 = NZ_JAHDMI010000071.1 Primary Assembly 29288 na k141_89385 unplaced-scaffold na na JAHDMI010000072.1 = NZ_JAHDMI010000072.1 Primary Assembly 12445 na k141_43145 unplaced-scaffold na na JAHDMI010000073.1 = NZ_JAHDMI010000073.1 Primary Assembly 19191 na k141_36232 unplaced-scaffold na na JAHDMI010000074.1 = NZ_JAHDMI010000074.1 Primary Assembly 3548 na k141_53183 unplaced-scaffold na na JAHDMI010000075.1 = NZ_JAHDMI010000075.1 Primary Assembly 1288 na k141_61213 unplaced-scaffold na na JAHDMI010000076.1 = NZ_JAHDMI010000076.1 Primary Assembly 2552 na k141_58951 unplaced-scaffold na na JAHDMI010000077.1 = NZ_JAHDMI010000077.1 Primary Assembly 5178 na k141_83347 unplaced-scaffold na na JAHDMI010000078.1 = NZ_JAHDMI010000078.1 Primary Assembly 36552 na k141_83325 unplaced-scaffold na na JAHDMI010000079.1 = NZ_JAHDMI010000079.1 Primary Assembly 16546 na k141_39804 unplaced-scaffold na na JAHDMI010000080.1 = NZ_JAHDMI010000080.1 Primary Assembly 11326 na k141_42594 unplaced-scaffold na na JAHDMI010000081.1 = NZ_JAHDMI010000081.1 Primary Assembly 16706 na k141_5804 unplaced-scaffold na na JAHDMI010000082.1 = NZ_JAHDMI010000082.1 Primary Assembly 13636 na k141_36804 unplaced-scaffold na na JAHDMI010000083.1 = NZ_JAHDMI010000083.1 Primary Assembly 11327 na k141_89968 unplaced-scaffold na na JAHDMI010000084.1 = NZ_JAHDMI010000084.1 Primary Assembly 22202 na k141_9203 unplaced-scaffold na na JAHDMI010000085.1 = NZ_JAHDMI010000085.1 Primary Assembly 1042 na k141_6412 unplaced-scaffold na na JAHDMI010000086.1 = NZ_JAHDMI010000086.1 Primary Assembly 3338 na k141_47758 unplaced-scaffold na na JAHDMI010000087.1 = NZ_JAHDMI010000087.1 Primary Assembly 39543 na k141_74924 unplaced-scaffold na na JAHDMI010000088.1 = NZ_JAHDMI010000088.1 Primary Assembly 56506 na k141_89660 unplaced-scaffold na na JAHDMI010000089.1 = NZ_JAHDMI010000089.1 Primary Assembly 32334 na k141_97567 unplaced-scaffold na na JAHDMI010000090.1 = NZ_JAHDMI010000090.1 Primary Assembly 1160 na k141_42601 unplaced-scaffold na na JAHDMI010000091.1 = NZ_JAHDMI010000091.1 Primary Assembly 14007 na k141_83286 unplaced-scaffold na na JAHDMI010000092.1 = NZ_JAHDMI010000092.1 Primary Assembly 21111 na k141_30496 unplaced-scaffold na na JAHDMI010000093.1 = NZ_JAHDMI010000093.1 Primary Assembly 12710 na k141_32464 unplaced-scaffold na na JAHDMI010000094.1 = NZ_JAHDMI010000094.1 Primary Assembly 5887 na k141_45107 unplaced-scaffold na na JAHDMI010000095.1 = NZ_JAHDMI010000095.1 Primary Assembly 8671 na