# Assembly name: P.leo_Ple1_pat1.1 # Organism name: Panthera leo (lion) # Isolate: Ple1 # Sex: male # Taxid: 9689 # BioSample: SAMN17054329 # BioProject: PRJNA684340 # Submitter: Texas A&M University # Date: 2021-05-13 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAEQMX01 # Assembly method: NextDenovo v. 2.2-beta.0 # Expected final version: yes # Genome coverage: 76.0x # Sequencing technology: PacBio Sequel 2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_018350215.1 # RefSeq assembly accession: GCF_018350215.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_018350225.1 GCF_018350225.1 Primary Assembly ## GCF_019444605.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chrA1 assembled-molecule A1 Chromosome CM031450.1 = NC_056679.1 Primary Assembly 238914584 na chrA2 assembled-molecule A2 Chromosome CM031451.1 = NC_056680.1 Primary Assembly 167961581 na chrA3 assembled-molecule A3 Chromosome CM031452.1 = NC_056681.1 Primary Assembly 139988245 na chrB1 assembled-molecule B1 Chromosome CM031453.1 = NC_056682.1 Primary Assembly 205061116 na chrB2 assembled-molecule B2 Chromosome CM031454.1 = NC_056683.1 Primary Assembly 151445352 na chrB3 assembled-molecule B3 Chromosome CM031455.1 = NC_056684.1 Primary Assembly 147402474 na chrB4 assembled-molecule B4 Chromosome CM031456.1 = NC_056685.1 Primary Assembly 141504389 na chrC1 assembled-molecule C1 Chromosome CM031457.1 = NC_056686.1 Primary Assembly 220622163 na chrC2 assembled-molecule C2 Chromosome CM031458.1 = NC_056687.1 Primary Assembly 158330212 na chrD1 assembled-molecule D1 Chromosome CM031459.1 = NC_056688.1 Primary Assembly 115343376 na chrD2 assembled-molecule D2 Chromosome CM031460.1 = NC_056689.1 Primary Assembly 87363192 na chrD3 assembled-molecule D3 Chromosome CM031461.1 = NC_056690.1 Primary Assembly 94488104 na chrD4 assembled-molecule D4 Chromosome CM031462.1 = NC_056691.1 Primary Assembly 94013389 na chrE1 assembled-molecule E1 Chromosome CM031463.1 = NC_056692.1 Primary Assembly 61380078 na chrE2 assembled-molecule E2 Chromosome CM031464.1 = NC_056693.1 Primary Assembly 61787680 na chrE3 assembled-molecule E3 Chromosome CM031465.1 = NC_056694.1 Primary Assembly 41728670 na chrF2 assembled-molecule F2 Chromosome CM031466.1 = NC_056695.1 Primary Assembly 83205205 na chrF3 assembled-molecule F3 Chromosome CM031467.1 = NC_056696.1 Primary Assembly 69419297 na chrY assembled-molecule Y Chromosome CM031449.1 = NC_056697.1 Primary Assembly 8609702 na chrA2_random_Un_scaffold_41 unlocalized-scaffold A2 Chromosome JAEQMX010000049.1 = NW_024962216.1 Primary Assembly 450657 na chrA2_random_Un_scaffold_54 unlocalized-scaffold A2 Chromosome JAEQMX010000062.1 = NW_024962217.1 Primary Assembly 164127 na chrA3_random_Un_scaffold_74 unlocalized-scaffold A3 Chromosome JAEQMX010000081.1 = NW_024962218.1 Primary Assembly 59318 na chrB1_random_Un_scaffold_55 unlocalized-scaffold B1 Chromosome JAEQMX010000063.1 = NW_024962219.1 Primary Assembly 156135 na chrB3_random_Un_scaffold_42 unlocalized-scaffold B3 Chromosome JAEQMX010000050.1 = NW_024962220.1 Primary Assembly 439063 na chrC1_random_Un_scaffold_66 unlocalized-scaffold C1 Chromosome JAEQMX010000073.1 = NW_024962221.1 Primary Assembly 97791 na chrC1_random_Un_scaffold_68 unlocalized-scaffold C1 Chromosome JAEQMX010000075.1 = NW_024962222.1 Primary Assembly 88994 na chrC2_random_Un_scaffold_67 unlocalized-scaffold C2 Chromosome JAEQMX010000074.1 = NW_024962223.1 Primary Assembly 93348 na chrD1_random_Un_scaffold_75 unlocalized-scaffold D1 Chromosome JAEQMX010000082.1 = NW_024962224.1 Primary Assembly 56796 na chrD2_random_Un_scaffold_63 unlocalized-scaffold D2 Chromosome JAEQMX010000070.1 = NW_024962225.1 Primary Assembly 112912 na chrE1_random_Un_scaffold_49 unlocalized-scaffold E1 Chromosome JAEQMX010000057.1 = NW_024962226.1 Primary Assembly 308889 na chrE1_random_Un_scaffold_50 unlocalized-scaffold E1 Chromosome JAEQMX010000058.1 = NW_024962227.1 Primary Assembly 243141 na chrE1_random_Un_scaffold_57 unlocalized-scaffold E1 Chromosome JAEQMX010000065.1 = NW_024962228.1 Primary Assembly 141391 na chrE1_random_Un_scaffold_65 unlocalized-scaffold E1 Chromosome JAEQMX010000072.1 = NW_024962229.1 Primary Assembly 102505 na chrE1_random_Un_scaffold_73 unlocalized-scaffold E1 Chromosome JAEQMX010000080.1 = NW_024962230.1 Primary Assembly 60407 na chrF3_random_Un_scaffold_30 unlocalized-scaffold F3 Chromosome JAEQMX010000039.1 = NW_024962231.1 Primary Assembly 1367245 na chrY_random_Un_scaffold_78 unlocalized-scaffold Y Chromosome JAEQMX010000085.1 = NW_024962232.1 Primary Assembly 669012 na chrY_random_Un_scaffold_79 unlocalized-scaffold Y Chromosome JAEQMX010000086.1 = NW_024962233.1 Primary Assembly 504101 na chrY_random_Un_scaffold_80 unlocalized-scaffold Y Chromosome JAEQMX010000087.1 = NW_024962234.1 Primary Assembly 459065 na chrY_random_Un_scaffold_81 unlocalized-scaffold Y Chromosome JAEQMX010000088.1 = NW_024962235.1 Primary Assembly 432664 na chrY_random_Un_scaffold_82 unlocalized-scaffold Y Chromosome JAEQMX010000089.1 = NW_024962236.1 Primary Assembly 393145 na chrY_random_Un_scaffold_83 unlocalized-scaffold Y Chromosome JAEQMX010000090.1 = NW_024962237.1 Primary Assembly 285082 na chrY_random_Un_scaffold_84 unlocalized-scaffold Y Chromosome JAEQMX010000091.1 = NW_024962238.1 Primary Assembly 268049 na chrY_random_Un_scaffold_85 unlocalized-scaffold Y Chromosome JAEQMX010000092.1 = NW_024962239.1 Primary Assembly 267247 na chrY_random_Un_scaffold_86 unlocalized-scaffold Y Chromosome JAEQMX010000093.1 = NW_024962240.1 Primary Assembly 247052 na chrY_random_Un_scaffold_87 unlocalized-scaffold Y Chromosome JAEQMX010000094.1 = NW_024962241.1 Primary Assembly 199686 na chrY_random_Un_scaffold_88 unlocalized-scaffold Y Chromosome JAEQMX010000095.1 = NW_024962242.1 Primary Assembly 199165 na chrY_random_Un_scaffold_89 unlocalized-scaffold Y Chromosome JAEQMX010000096.1 = NW_024962243.1 Primary Assembly 194577 na chrY_random_Un_scaffold_90 unlocalized-scaffold Y Chromosome JAEQMX010000097.1 = NW_024962244.1 Primary Assembly 136774 na chrY_random_Un_scaffold_91 unlocalized-scaffold Y Chromosome JAEQMX010000098.1 = NW_024962245.1 Primary Assembly 55398 na Un_scaffold_43 unplaced-scaffold na na JAEQMX010000051.1 = NW_024962246.1 Primary Assembly 408784 na Un_scaffold_58 unplaced-scaffold na na JAEQMX010000066.1 = NW_024962247.1 Primary Assembly 136873 na Un_scaffold_64 unplaced-scaffold na na JAEQMX010000071.1 = NW_024962248.1 Primary Assembly 107655 na Un_scaffold_69 unplaced-scaffold na na JAEQMX010000076.1 = NW_024962249.1 Primary Assembly 76506 na MT assembled-molecule MT Mitochondrion na <> NC_028302.1 non-nuclear 16620 na