# Assembly name: LU_Pher_1.0 # Organism name: Porcisia hertigi (kinetoplastids) # Infraspecific name: strain=C119 # Taxid: 2761500 # BioSample: SAMN17294121 # BioProject: PRJNA691541 # Submitter: Lancaster University # Date: 2021-04-15 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAFJZO01 # Assembly method: Flye assembler v. 2.6; Samtools v. 1.9 # Expected final version: yes # Genome coverage: 177.1x # Sequencing technology: Oxford Nanopore MinION; Illumina HiSeq; Illumina MiSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_017918235.1 # RefSeq assembly accession: GCF_017918235.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017918315.1 GCF_017918315.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Hert_Chr_1 assembled-molecule 1 Chromosome CM030504.1 = NC_090560.1 Primary Assembly 258204 na Hert_Chr_2 assembled-molecule 2 Chromosome CM030505.1 = NC_090561.1 Primary Assembly 395974 na Hert_Chr_3 assembled-molecule 3 Chromosome CM030506.1 = NC_090562.1 Primary Assembly 390182 na Hert_Chr_4 assembled-molecule 4 Chromosome CM030507.1 = NC_090563.1 Primary Assembly 498675 na Hert_Chr_5 assembled-molecule 5 Chromosome CM030508.1 = NC_090564.1 Primary Assembly 476969 na Hert_Chr_6 assembled-molecule 6 Chromosome CM030509.1 = NC_090565.1 Primary Assembly 512181 na Hert_Chr_7 assembled-molecule 7 Chromosome CM030510.1 = NC_090566.1 Primary Assembly 592553 na Hert_Chr_8 assembled-molecule 8 Chromosome CM030511.1 = NC_090567.1 Primary Assembly 328227 na Hert_Chr_9 assembled-molecule 9 Chromosome CM030512.1 = NC_090568.1 Primary Assembly 599224 na Hert_Chr_10 assembled-molecule 10 Chromosome CM030513.1 = NC_090569.1 Primary Assembly 428111 na Hert_Chr_11 assembled-molecule 11 Chromosome CM030514.1 = NC_090570.1 Primary Assembly 541696 na Hert_Chr_12 assembled-molecule 12 Chromosome CM030515.1 = NC_090571.1 Primary Assembly 599599 na Hert_Chr_13 assembled-molecule 13 Chromosome CM030516.1 = NC_090572.1 Primary Assembly 679346 na Hert_Chr_14 assembled-molecule 14 Chromosome CM030517.1 = NC_090573.1 Primary Assembly 590474 na Hert_Chr_15 assembled-molecule 15 Chromosome CM030518.1 = NC_090574.1 Primary Assembly 672858 na Hert_Chr_16 assembled-molecule 16 Chromosome CM030519.1 = NC_090575.1 Primary Assembly 678085 na Hert_Chr_17 assembled-molecule 17 Chromosome CM030520.1 = NC_090576.1 Primary Assembly 864573 na Hert_Chr_18 assembled-molecule 18 Chromosome CM030521.1 = NC_090577.1 Primary Assembly 718950 na Hert_Chr_19 assembled-molecule 19 Chromosome CM030522.1 = NC_090578.1 Primary Assembly 654463 na Hert_Chr_20 assembled-molecule 20 Chromosome CM030523.1 = NC_090579.1 Primary Assembly 768166 na Hert_Chr_21 assembled-molecule 21 Chromosome CM030524.1 = NC_090580.1 Primary Assembly 744256 na Hert_Chr_22 assembled-molecule 22 Chromosome CM030525.1 = NC_090581.1 Primary Assembly 671130 na Hert_Chr_23 assembled-molecule 23 Chromosome CM030526.1 = NC_090582.1 Primary Assembly 878396 na Hert_Chr_24 assembled-molecule 24 Chromosome CM030527.1 = NC_090583.1 Primary Assembly 705925 na Hert_Chr_25 assembled-molecule 25 Chromosome CM030528.1 = NC_090584.1 Primary Assembly 923117 na Hert_Chr_26 assembled-molecule 26 Chromosome CM030529.1 = NC_090585.1 Primary Assembly 1113068 na Hert_Chr_27 assembled-molecule 27 Chromosome CM030530.1 = NC_090586.1 Primary Assembly 967170 na Hert_Chr_28 assembled-molecule 28 Chromosome CM030531.1 = NC_090587.1 Primary Assembly 1371793 na Hert_Chr_29 assembled-molecule 29 Chromosome CM030532.1 = NC_090588.1 Primary Assembly 102978 na Hert_Chr_30 assembled-molecule 30 Chromosome CM030533.1 = NC_090589.1 Primary Assembly 1533558 na Hert_Chr_31 assembled-molecule 31 Chromosome CM030534.1 = NC_090590.1 Primary Assembly 1941496 na Hert_Chr_32 assembled-molecule 32 Chromosome CM030535.1 = NC_090591.1 Primary Assembly 1520527 na Hert_Chr_33 assembled-molecule 33 Chromosome CM030536.1 = NC_090592.1 Primary Assembly 1447014 na Hert_Chr_34 assembled-molecule 34 Chromosome CM030537.1 = NC_090593.1 Primary Assembly 1741016 na Hert_Chr_35 assembled-molecule 35 Chromosome CM030538.1 = NC_090594.1 Primary Assembly 2311116 na Hert_Chr_36 assembled-molecule 36 Chromosome CM030539.1 = NC_090595.1 Primary Assembly 3844477 na contig_1 unplaced-scaffold na na JAFJZO010000037.1 = NW_027150675.1 Primary Assembly 85171 na contig_2 unplaced-scaffold na na JAFJZO010000038.1 = NW_027150676.1 Primary Assembly 65724 na contig_3 unplaced-scaffold na na JAFJZO010000039.1 = NW_027150677.1 Primary Assembly 781080 na contig_4 unplaced-scaffold na na JAFJZO010000040.1 = NW_027150678.1 Primary Assembly 30369 na contig_6 unplaced-scaffold na na JAFJZO010000041.1 = NW_027150679.1 Primary Assembly 396031 na contig_7 unplaced-scaffold na na JAFJZO010000042.1 = NW_027150680.1 Primary Assembly 4591 na contig_9 unplaced-scaffold na na JAFJZO010000043.1 = NW_027150681.1 Primary Assembly 521 na contig_10 unplaced-scaffold na na JAFJZO010000044.1 = NW_027150682.1 Primary Assembly 3926 na contig_12 unplaced-scaffold na na JAFJZO010000045.1 = NW_027150683.1 Primary Assembly 3795 na contig_13 unplaced-scaffold na na JAFJZO010000046.1 = NW_027150684.1 Primary Assembly 69657 na contig_14 unplaced-scaffold na na JAFJZO010000047.1 = NW_027150685.1 Primary Assembly 58802 na contig_15 unplaced-scaffold na na JAFJZO010000048.1 = NW_027150686.1 Primary Assembly 16661 na contig_16 unplaced-scaffold na na JAFJZO010000049.1 = NW_027150687.1 Primary Assembly 4793 na contig_18 unplaced-scaffold na na JAFJZO010000050.1 = NW_027150688.1 Primary Assembly 2856 na contig_19 unplaced-scaffold na na JAFJZO010000051.1 = NW_027150689.1 Primary Assembly 26769 na contig_20 unplaced-scaffold na na JAFJZO010000052.1 = NW_027150690.1 Primary Assembly 17905 na contig_23 unplaced-scaffold na na JAFJZO010000053.1 = NW_027150691.1 Primary Assembly 11592 na contig_24 unplaced-scaffold na na JAFJZO010000054.1 = NW_027150692.1 Primary Assembly 1834 na contig_31 unplaced-scaffold na na JAFJZO010000055.1 = NW_027150693.1 Primary Assembly 5029 na contig_34 unplaced-scaffold na na JAFJZO010000056.1 = NW_027150694.1 Primary Assembly 3662 na contig_37 unplaced-scaffold na na JAFJZO010000057.1 = NW_027150695.1 Primary Assembly 3720 na contig_39 unplaced-scaffold na na JAFJZO010000058.1 = NW_027150696.1 Primary Assembly 5488 na contig_41 unplaced-scaffold na na JAFJZO010000059.1 = NW_027150697.1 Primary Assembly 761 na contig_50 unplaced-scaffold na na JAFJZO010000060.1 = NW_027150698.1 Primary Assembly 23891 na contig_52 unplaced-scaffold na na JAFJZO010000061.1 = NW_027150699.1 Primary Assembly 975 na contig_55 unplaced-scaffold na na JAFJZO010000062.1 = NW_027150700.1 Primary Assembly 1197 na contig_64 unplaced-scaffold na na JAFJZO010000063.1 = NW_027150701.1 Primary Assembly 10660 na contig_66 unplaced-scaffold na na JAFJZO010000064.1 = NW_027150702.1 Primary Assembly 7590 na contig_67 unplaced-scaffold na na JAFJZO010000065.1 = NW_027150703.1 Primary Assembly 43110 na contig_70 unplaced-scaffold na na JAFJZO010000066.1 = NW_027150704.1 Primary Assembly 15084 na contig_71 unplaced-scaffold na na JAFJZO010000067.1 = NW_027150705.1 Primary Assembly 19024 na contig_78 unplaced-scaffold na na JAFJZO010000068.1 = NW_027150706.1 Primary Assembly 6931 na contig_80 unplaced-scaffold na na JAFJZO010000069.1 = NW_027150707.1 Primary Assembly 4553 na contig_82 unplaced-scaffold na na JAFJZO010000070.1 = NW_027150708.1 Primary Assembly 38175 na contig_85 unplaced-scaffold na na JAFJZO010000071.1 = NW_027150709.1 Primary Assembly 860 na contig_86 unplaced-scaffold na na JAFJZO010000072.1 = NW_027150710.1 Primary Assembly 50829 na contig_87 unplaced-scaffold na na JAFJZO010000073.1 = NW_027150711.1 Primary Assembly 31020 na contig_91 unplaced-scaffold na na JAFJZO010000074.1 = NW_027150712.1 Primary Assembly 38355 na