# Assembly name: LU_LNam_1.0 # Organism name: Leishmania sp. Namibia (kinetoplastids) # Infraspecific name: strain=253 # Taxid: 2802991 # BioSample: SAMN17294129 # BioProject: PRJNA689706 # Submitter: Lancaster University # Date: 2021-04-15 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAFNID01 # Assembly method: Flye assembler v. 2.6; Samtools v. 1.9 # Expected final version: yes # Genome coverage: 291.5x # Sequencing technology: Oxford Nanopore MinION; Illumina HiSeq; Illumina MiSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_017918225.1 # RefSeq assembly accession: GCF_017918225.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017918305.1 GCF_017918305.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Hyrax_Chr_1 assembled-molecule 1 Chromosome CM030540.1 = NC_090524.1 Primary Assembly 319787 na Hyrax_Chr_2 assembled-molecule 2 Chromosome CM030541.1 = NC_090525.1 Primary Assembly 476382 na Hyrax_Chr_3 assembled-molecule 3 Chromosome CM030542.1 = NC_090526.1 Primary Assembly 416779 na Hyrax_Chr_4 assembled-molecule 4 Chromosome CM030543.1 = NC_090527.1 Primary Assembly 537843 na Hyrax_Chr_5 assembled-molecule 5 Chromosome CM030544.1 = NC_090528.1 Primary Assembly 526270 na Hyrax_Chr_6 assembled-molecule 6 Chromosome CM030545.1 = NC_090529.1 Primary Assembly 535497 na Hyrax_Chr_7 assembled-molecule 7 Chromosome CM030546.1 = NC_090530.1 Primary Assembly 660240 na Hyrax_Chr_8 assembled-molecule 8 Chromosome CM030547.1 = NC_090531.1 Primary Assembly 532133 na Hyrax_Chr_9 assembled-molecule 9 Chromosome CM030548.1 = NC_090532.1 Primary Assembly 622183 na Hyrax_Chr_10 assembled-molecule 10 Chromosome CM030549.1 = NC_090533.1 Primary Assembly 662431 na Hyrax_Chr_11 assembled-molecule 11 Chromosome CM030550.1 = NC_090534.1 Primary Assembly 657662 na Hyrax_Chr_12 assembled-molecule 12 Chromosome CM030551.1 = NC_090535.1 Primary Assembly 490513 na Hyrax_Chr_13 assembled-molecule 13 Chromosome CM030552.1 = NC_090536.1 Primary Assembly 689201 na Hyrax_Chr_14 assembled-molecule 14 Chromosome CM030553.1 = NC_090537.1 Primary Assembly 660714 na Hyrax_Chr_15 assembled-molecule 15 Chromosome CM030554.1 = NC_090538.1 Primary Assembly 648207 na Hyrax_Chr_16 assembled-molecule 16 Chromosome CM030555.1 = NC_090539.1 Primary Assembly 723386 na Hyrax_Chr_17 assembled-molecule 17 Chromosome CM030556.1 = NC_090540.1 Primary Assembly 721537 na Hyrax_Chr_18 assembled-molecule 18 Chromosome CM030557.1 = NC_090541.1 Primary Assembly 747869 na Hyrax_Chr_19 assembled-molecule 19 Chromosome CM030558.1 = NC_090542.1 Primary Assembly 722108 na Hyrax_Chr_20 assembled-molecule 20 Chromosome CM030559.1 = NC_090543.1 Primary Assembly 745034 na Hyrax_Chr_21 assembled-molecule 21 Chromosome CM030560.1 = NC_090544.1 Primary Assembly 823954 na Hyrax_Chr_22 assembled-molecule 22 Chromosome CM030561.1 = NC_090545.1 Primary Assembly 808929 na Hyrax_Chr_23 assembled-molecule 23 Chromosome CM030562.1 = NC_090546.1 Primary Assembly 779934 na Hyrax_Chr_24 assembled-molecule 24 Chromosome CM030563.1 = NC_090547.1 Primary Assembly 890967 na Hyrax_Chr_25 assembled-molecule 25 Chromosome CM030564.1 = NC_090548.1 Primary Assembly 951098 na Hyrax_Chr_26 assembled-molecule 26 Chromosome CM030565.1 = NC_090549.1 Primary Assembly 1066046 na Hyrax_Chr_27 assembled-molecule 27 Chromosome CM030566.1 = NC_090550.1 Primary Assembly 1161224 na Hyrax_Chr_28 assembled-molecule 28 Chromosome CM030567.1 = NC_090551.1 Primary Assembly 1184704 na Hyrax_Chr_29 assembled-molecule 29 Chromosome CM030568.1 = NC_090552.1 Primary Assembly 1166450 na Hyrax_Chr_30 assembled-molecule 30 Chromosome CM030569.1 = NC_090553.1 Primary Assembly 1398633 na Hyrax_Chr_31 assembled-molecule 31 Chromosome CM030570.1 = NC_090554.1 Primary Assembly 1641343 na Hyrax_Chr_32 assembled-molecule 32 Chromosome CM030571.1 = NC_090555.1 Primary Assembly 1578529 na Hyrax_Chr_33 assembled-molecule 33 Chromosome CM030572.1 = NC_090556.1 Primary Assembly 1589457 na Hyrax_Chr_34 assembled-molecule 34 Chromosome CM030573.1 = NC_090557.1 Primary Assembly 1808826 na Hyrax_Chr_35 assembled-molecule 35 Chromosome CM030574.1 = NC_090558.1 Primary Assembly 2187061 na Hyrax_Chr_36 assembled-molecule 36 Chromosome CM030575.1 = NC_090559.1 Primary Assembly 2737480 na contig_1 unplaced-scaffold na na JAFNID010000037.1 = NW_027150508.1 Primary Assembly 25252 na contig_5 unplaced-scaffold na na JAFNID010000038.1 = NW_027150509.1 Primary Assembly 7102 na contig_6 unplaced-scaffold na na JAFNID010000039.1 = NW_027150510.1 Primary Assembly 18558 na contig_7 unplaced-scaffold na na JAFNID010000040.1 = NW_027150511.1 Primary Assembly 666 na contig_8 unplaced-scaffold na na JAFNID010000041.1 = NW_027150512.1 Primary Assembly 11680 na contig_9 unplaced-scaffold na na JAFNID010000042.1 = NW_027150513.1 Primary Assembly 5930 na contig_10 unplaced-scaffold na na JAFNID010000043.1 = NW_027150514.1 Primary Assembly 11164 na contig_15 unplaced-scaffold na na JAFNID010000044.1 = NW_027150515.1 Primary Assembly 2463 na contig_16 unplaced-scaffold na na JAFNID010000045.1 = NW_027150516.1 Primary Assembly 748 na contig_18 unplaced-scaffold na na JAFNID010000046.1 = NW_027150517.1 Primary Assembly 2339 na contig_20 unplaced-scaffold na na JAFNID010000047.1 = NW_027150518.1 Primary Assembly 25555 na contig_22 unplaced-scaffold na na JAFNID010000048.1 = NW_027150519.1 Primary Assembly 1074 na contig_23 unplaced-scaffold na na JAFNID010000049.1 = NW_027150520.1 Primary Assembly 583 na contig_24 unplaced-scaffold na na JAFNID010000050.1 = NW_027150521.1 Primary Assembly 1453 na contig_25 unplaced-scaffold na na JAFNID010000051.1 = NW_027150522.1 Primary Assembly 3753 na contig_26 unplaced-scaffold na na JAFNID010000052.1 = NW_027150523.1 Primary Assembly 4184 na contig_28 unplaced-scaffold na na JAFNID010000053.1 = NW_027150524.1 Primary Assembly 643 na contig_29 unplaced-scaffold na na JAFNID010000054.1 = NW_027150525.1 Primary Assembly 3630 na contig_33 unplaced-scaffold na na JAFNID010000055.1 = NW_027150526.1 Primary Assembly 7082 na contig_34 unplaced-scaffold na na JAFNID010000056.1 = NW_027150527.1 Primary Assembly 29015 na contig_36 unplaced-scaffold na na JAFNID010000057.1 = NW_027150528.1 Primary Assembly 2895 na contig_37 unplaced-scaffold na na JAFNID010000058.1 = NW_027150529.1 Primary Assembly 3090 na contig_38 unplaced-scaffold na na JAFNID010000059.1 = NW_027150530.1 Primary Assembly 4706 na contig_39 unplaced-scaffold na na JAFNID010000060.1 = NW_027150531.1 Primary Assembly 10411 na contig_40 unplaced-scaffold na na JAFNID010000061.1 = NW_027150532.1 Primary Assembly 10705 na contig_42 unplaced-scaffold na na JAFNID010000062.1 = NW_027150533.1 Primary Assembly 5365 na contig_43 unplaced-scaffold na na JAFNID010000063.1 = NW_027150534.1 Primary Assembly 7503 na contig_44 unplaced-scaffold na na JAFNID010000064.1 = NW_027150535.1 Primary Assembly 6394 na contig_47 unplaced-scaffold na na JAFNID010000065.1 = NW_027150536.1 Primary Assembly 7940 na contig_48 unplaced-scaffold na na JAFNID010000066.1 = NW_027150537.1 Primary Assembly 742 na contig_49 unplaced-scaffold na na JAFNID010000067.1 = NW_027150538.1 Primary Assembly 25588 na