# Assembly name:  LU_Lmar_1.0
# Organism name:  Leishmania martiniquensis (kinetoplastids)
# Isolate:  LSCM1
# Taxid:          1580590
# BioSample:      SAMN17294109
# BioProject:     PRJNA691531
# Submitter:      Lancaster University
# Date:           2021-04-15
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JAFEUZ01
# Assembly method: Flye assembler v. 2.6; Samtools v. 1.9
# Expected final version: yes
# Genome coverage: 277.9x
# Sequencing technology: Oxford Nanopore MinION; Illumina HiSeq; Illumina MiSeq
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_017916325.1
# RefSeq assembly accession: GCF_017916325.1
# RefSeq assembly and GenBank assemblies identical: yes
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_017916405.1	GCF_017916405.1	Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
CM1_Chr_1	assembled-molecule	1	Chromosome	CM030396.1	=	NC_090136.1	Primary Assembly	241723	na
CM1_Chr_2	assembled-molecule	2	Chromosome	CM030397.1	=	NC_090137.1	Primary Assembly	371269	na
CM1_Chr_3	assembled-molecule	3	Chromosome	CM030398.1	=	NC_090138.1	Primary Assembly	386457	na
CM1_Chr_4	assembled-molecule	4	Chromosome	CM030399.1	=	NC_090139.1	Primary Assembly	454582	na
CM1_Chr_5	assembled-molecule	5	Chromosome	CM030400.1	=	NC_090140.1	Primary Assembly	464642	na
CM1_Chr_6	assembled-molecule	6	Chromosome	CM030401.1	=	NC_090141.1	Primary Assembly	474928	na
CM1_Chr_7	assembled-molecule	7	Chromosome	CM030402.1	=	NC_090142.1	Primary Assembly	593129	na
CM1_Chr_8	assembled-molecule	8	Chromosome	CM030403.1	=	NC_090143.1	Primary Assembly	507065	na
CM1_Chr_9	assembled-molecule	9	Chromosome	CM030404.1	=	NC_090144.1	Primary Assembly	574862	na
CM1_Chr_10	assembled-molecule	10	Chromosome	CM030405.1	=	NC_090145.1	Primary Assembly	647970	na
CM1_Chr_11	assembled-molecule	11	Chromosome	CM030406.1	=	NC_090146.1	Primary Assembly	595001	na
CM1_Chr_12	assembled-molecule	12	Chromosome	CM030407.1	=	NC_090147.1	Primary Assembly	480739	na
CM1_Chr_13	assembled-molecule	13	Chromosome	CM030408.1	=	NC_090148.1	Primary Assembly	647635	na
CM1_Chr_14	assembled-molecule	14	Chromosome	CM030409.1	=	NC_090149.1	Primary Assembly	624253	na
CM1_Chr_15	assembled-molecule	15	Chromosome	CM030410.1	=	NC_090150.1	Primary Assembly	651209	na
CM1_Chr_16	assembled-molecule	16	Chromosome	CM030411.1	=	NC_090151.1	Primary Assembly	683488	na
CM1_Chr_17	assembled-molecule	17	Chromosome	CM030412.1	=	NC_090152.1	Primary Assembly	669119	na
CM1_Chr_18	assembled-molecule	18	Chromosome	CM030413.1	=	NC_090153.1	Primary Assembly	706780	na
CM1_Chr_19	assembled-molecule	19	Chromosome	CM030414.1	=	NC_090154.1	Primary Assembly	656258	na
CM1_Chr_20	assembled-molecule	20	Chromosome	CM030415.1	=	NC_090155.1	Primary Assembly	732099	na
CM1_Chr_21	assembled-molecule	21	Chromosome	CM030416.1	=	NC_090156.1	Primary Assembly	761043	na
CM1_Chr_22	assembled-molecule	22	Chromosome	CM030417.1	=	NC_090157.1	Primary Assembly	715967	na
CM1_Chr_23	assembled-molecule	23	Chromosome	CM030418.1	=	NC_090158.1	Primary Assembly	770776	na
CM1_Chr_24	assembled-molecule	24	Chromosome	CM030419.1	=	NC_090159.1	Primary Assembly	841843	na
CM1_Chr_25	assembled-molecule	25	Chromosome	CM030420.1	=	NC_090160.1	Primary Assembly	939223	na
CM1_Chr_26	assembled-molecule	26	Chromosome	CM030421.1	=	NC_090161.1	Primary Assembly	1046741	na
CM1_Chr_27	assembled-molecule	27	Chromosome	CM030422.1	=	NC_090162.1	Primary Assembly	1140797	na
CM1_Chr_28	assembled-molecule	28	Chromosome	CM030423.1	=	NC_090163.1	Primary Assembly	1194006	na
CM1_Chr_29	assembled-molecule	29	Chromosome	CM030424.1	=	NC_090164.1	Primary Assembly	1186087	na
CM1_Chr_30	assembled-molecule	30	Chromosome	CM030425.1	=	NC_090165.1	Primary Assembly	1358980	na
CM1_Chr_31	assembled-molecule	31	Chromosome	CM030426.1	=	NC_090166.1	Primary Assembly	1553266	na
CM1_Chr_32	assembled-molecule	32	Chromosome	CM030427.1	=	NC_090167.1	Primary Assembly	1576644	na
CM1_Chr_33	assembled-molecule	33	Chromosome	CM030428.1	=	NC_090168.1	Primary Assembly	1613354	na
CM1_Chr_34	assembled-molecule	34	Chromosome	CM030429.1	=	NC_090169.1	Primary Assembly	1718510	na
CM1_Chr_35	assembled-molecule	35	Chromosome	CM030430.1	=	NC_090170.1	Primary Assembly	2054861	na
CM1_Chr_36	assembled-molecule	36	Chromosome	CM030431.1	=	NC_090171.1	Primary Assembly	2708212	na
contig_5	unplaced-scaffold	na	na	JAFEUZ010000037.1	=	NW_027124991.1	Primary Assembly	15294	na
contig_7	unplaced-scaffold	na	na	JAFEUZ010000038.1	=	NW_027124992.1	Primary Assembly	1773	na
contig_10	unplaced-scaffold	na	na	JAFEUZ010000039.1	=	NW_027124993.1	Primary Assembly	3949	na
contig_11	unplaced-scaffold	na	na	JAFEUZ010000040.1	=	NW_027124994.1	Primary Assembly	13468	na
contig_12	unplaced-scaffold	na	na	JAFEUZ010000041.1	=	NW_027124995.1	Primary Assembly	32242	na
contig_15	unplaced-scaffold	na	na	JAFEUZ010000042.1	=	NW_027124996.1	Primary Assembly	3426	na