# Assembly name: ASM1761257v1 # Organism name: Halomicrobium sp. IBSBa (euryarchaeotes) # Infraspecific name: strain=IBSBa # Taxid: 2778916 # BioSample: SAMN16385344 # BioProject: PRJNA667829 # Submitter: Marmara University, IBSB-Industrial Biotechnology and Systems Biology Research Group # Date: 2021-03-29 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JADPQC01 # Assembly method: SPAdes v. 3.7 # Expected final version: yes # Genome coverage: 30.0x # Sequencing technology: Illumina HiSeq # GenBank assembly accession: GCA_017612575.1 # RefSeq assembly accession: GCF_017612575.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017612615.1 GCF_017612615.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_6_length_201004_cov_36.4261 unlocalized-scaffold unnamed Plasmid JADPQC010000006.1 = NZ_JADPQC010000006.1 Primary Assembly 201004 na NODE_10_length_85243_cov_70.1083 unplaced-scaffold na na JADPQC010000010.1 = NZ_JADPQC010000010.1 Primary Assembly 85243 na NODE_11_length_26981_cov_176.567 unplaced-scaffold na na JADPQC010000011.1 = NZ_JADPQC010000011.1 Primary Assembly 26981 na NODE_12_length_24537_cov_60.6078 unplaced-scaffold na na JADPQC010000012.1 = NZ_JADPQC010000012.1 Primary Assembly 24537 na NODE_13_length_8096_cov_76.9219 unplaced-scaffold na na JADPQC010000013.1 = NZ_JADPQC010000013.1 Primary Assembly 8096 na NODE_14_length_5042_cov_47.6391 unplaced-scaffold na na JADPQC010000014.1 = NZ_JADPQC010000014.1 Primary Assembly 5042 na NODE_15_length_4881_cov_31.9609 unplaced-scaffold na na JADPQC010000015.1 = NZ_JADPQC010000015.1 Primary Assembly 4881 na NODE_16_length_3713_cov_51.7925 unplaced-scaffold na na JADPQC010000016.1 = NZ_JADPQC010000016.1 Primary Assembly 3713 na NODE_17_length_3318_cov_158.434 unplaced-scaffold na na JADPQC010000017.1 = NZ_JADPQC010000017.1 Primary Assembly 3318 na NODE_18_length_1289_cov_85.5 unplaced-scaffold na na JADPQC010000018.1 = NZ_JADPQC010000018.1 Primary Assembly 1289 na NODE_19_length_928_cov_107.506 unplaced-scaffold na na JADPQC010000019.1 = NZ_JADPQC010000019.1 Primary Assembly 928 na NODE_1_length_1299894_cov_59.5057 unplaced-scaffold na na JADPQC010000001.1 = NZ_JADPQC010000001.1 Primary Assembly 1299894 na NODE_20_length_742_cov_98.2472 unplaced-scaffold na na JADPQC010000020.1 = NZ_JADPQC010000020.1 Primary Assembly 742 na NODE_21_length_707_cov_82.0569 unplaced-scaffold na na JADPQC010000021.1 = NZ_JADPQC010000021.1 Primary Assembly 707 na NODE_22_length_669_cov_0.876384 unplaced-scaffold na na JADPQC010000022.1 = NZ_JADPQC010000022.1 Primary Assembly 669 na NODE_23_length_666_cov_0.866419 unplaced-scaffold na na JADPQC010000023.1 = NZ_JADPQC010000023.1 Primary Assembly 666 na NODE_24_length_649_cov_1.18199 unplaced-scaffold na na JADPQC010000024.1 = NZ_JADPQC010000024.1 Primary Assembly 649 na NODE_25_length_432_cov_0.549495 unplaced-scaffold na na JADPQC010000025.1 = NZ_JADPQC010000025.1 Primary Assembly 432 na NODE_26_length_480_cov_0.70255 unplaced-scaffold na na JADPQC010000026.1 = NZ_JADPQC010000026.1 Primary Assembly 480 na NODE_27_length_477_cov_0.702857 unplaced-scaffold na na JADPQC010000027.1 = NZ_JADPQC010000027.1 Primary Assembly 477 na NODE_28_length_476_cov_0.707736 unplaced-scaffold na na JADPQC010000028.1 = NZ_JADPQC010000028.1 Primary Assembly 476 na NODE_29_length_471_cov_0.718023 unplaced-scaffold na na JADPQC010000029.1 = NZ_JADPQC010000029.1 Primary Assembly 471 na NODE_2_length_546337_cov_68.6414 unplaced-scaffold na na JADPQC010000002.1 = NZ_JADPQC010000002.1 Primary Assembly 546337 na NODE_31_length_463_cov_0.738095 unplaced-scaffold na na JADPQC010000030.1 = NZ_JADPQC010000030.1 Primary Assembly 463 na NODE_32_length_462_cov_0.737313 unplaced-scaffold na na JADPQC010000031.1 = NZ_JADPQC010000031.1 Primary Assembly 462 na NODE_34_length_458_cov_0.73716 unplaced-scaffold na na JADPQC010000032.1 = NZ_JADPQC010000032.1 Primary Assembly 458 na NODE_35_length_457_cov_0.690909 unplaced-scaffold na na JADPQC010000033.1 = NZ_JADPQC010000033.1 Primary Assembly 457 na NODE_36_length_456_cov_0.68997 unplaced-scaffold na na JADPQC010000034.1 = NZ_JADPQC010000034.1 Primary Assembly 456 na NODE_37_length_453_cov_0.730061 unplaced-scaffold na na JADPQC010000035.1 = NZ_JADPQC010000035.1 Primary Assembly 453 na NODE_38_length_452_cov_0.76 unplaced-scaffold na na JADPQC010000036.1 = NZ_JADPQC010000036.1 Primary Assembly 452 na NODE_39_length_450_cov_0.733746 unplaced-scaffold na na JADPQC010000037.1 = NZ_JADPQC010000037.1 Primary Assembly 450 na NODE_3_length_356864_cov_56.159 unplaced-scaffold na na JADPQC010000003.1 = NZ_JADPQC010000003.1 Primary Assembly 356864 na NODE_40_length_445_cov_0.773585 unplaced-scaffold na na JADPQC010000038.1 = NZ_JADPQC010000038.1 Primary Assembly 445 na NODE_41_length_445_cov_0.779874 unplaced-scaffold na na JADPQC010000039.1 = NZ_JADPQC010000039.1 Primary Assembly 445 na NODE_42_length_443_cov_0.699367 unplaced-scaffold na na JADPQC010000040.1 = NZ_JADPQC010000040.1 Primary Assembly 443 na NODE_43_length_443_cov_0.778481 unplaced-scaffold na na JADPQC010000041.1 = NZ_JADPQC010000041.1 Primary Assembly 443 na NODE_44_length_443_cov_0.781646 unplaced-scaffold na na JADPQC010000042.1 = NZ_JADPQC010000042.1 Primary Assembly 443 na NODE_45_length_443_cov_0.746835 unplaced-scaffold na na JADPQC010000043.1 = NZ_JADPQC010000043.1 Primary Assembly 443 na NODE_47_length_441_cov_0.729299 unplaced-scaffold na na JADPQC010000044.1 = NZ_JADPQC010000044.1 Primary Assembly 441 na NODE_48_length_436_cov_0.7411 unplaced-scaffold na na JADPQC010000045.1 = NZ_JADPQC010000045.1 Primary Assembly 436 na NODE_49_length_436_cov_0.750809 unplaced-scaffold na na JADPQC010000046.1 = NZ_JADPQC010000046.1 Primary Assembly 436 na NODE_4_length_232814_cov_60.546 unplaced-scaffold na na JADPQC010000004.1 = NZ_JADPQC010000004.1 Primary Assembly 232814 na NODE_50_length_435_cov_0.801948 unplaced-scaffold na na JADPQC010000047.1 = NZ_JADPQC010000047.1 Primary Assembly 435 na NODE_51_length_433_cov_0.679739 unplaced-scaffold na na JADPQC010000048.1 = NZ_JADPQC010000048.1 Primary Assembly 433 na NODE_52_length_426_cov_0.789298 unplaced-scaffold na na JADPQC010000049.1 = NZ_JADPQC010000049.1 Primary Assembly 426 na NODE_55_length_423_cov_0.827703 unplaced-scaffold na na JADPQC010000050.1 = NZ_JADPQC010000050.1 Primary Assembly 423 na NODE_56_length_421_cov_0.840136 unplaced-scaffold na na JADPQC010000051.1 = NZ_JADPQC010000051.1 Primary Assembly 421 na NODE_57_length_419_cov_0.732877 unplaced-scaffold na na JADPQC010000052.1 = NZ_JADPQC010000052.1 Primary Assembly 419 na NODE_58_length_417_cov_0.851724 unplaced-scaffold na na JADPQC010000053.1 = NZ_JADPQC010000053.1 Primary Assembly 417 na NODE_59_length_414_cov_0.860627 unplaced-scaffold na na JADPQC010000054.1 = NZ_JADPQC010000054.1 Primary Assembly 414 na NODE_5_length_232098_cov_63.6979 unplaced-scaffold na na JADPQC010000005.1 = NZ_JADPQC010000005.1 Primary Assembly 232098 na NODE_62_length_413_cov_0.825175 unplaced-scaffold na na JADPQC010000055.1 = NZ_JADPQC010000055.1 Primary Assembly 413 na NODE_64_length_410_cov_0.840989 unplaced-scaffold na na JADPQC010000056.1 = NZ_JADPQC010000056.1 Primary Assembly 410 na NODE_65_length_409_cov_0.762411 unplaced-scaffold na na JADPQC010000057.1 = NZ_JADPQC010000057.1 Primary Assembly 409 na NODE_66_length_408_cov_0.871886 unplaced-scaffold na na JADPQC010000058.1 = NZ_JADPQC010000058.1 Primary Assembly 408 na NODE_67_length_407_cov_0.764286 unplaced-scaffold na na JADPQC010000059.1 = NZ_JADPQC010000059.1 Primary Assembly 407 na NODE_68_length_406_cov_0.878136 unplaced-scaffold na na JADPQC010000060.1 = NZ_JADPQC010000060.1 Primary Assembly 406 na NODE_70_length_403_cov_0.894928 unplaced-scaffold na na JADPQC010000061.1 = NZ_JADPQC010000061.1 Primary Assembly 403 na NODE_72_length_401_cov_0.879562 unplaced-scaffold na na JADPQC010000062.1 = NZ_JADPQC010000062.1 Primary Assembly 401 na NODE_73_length_398_cov_0.782288 unplaced-scaffold na na JADPQC010000063.1 = NZ_JADPQC010000063.1 Primary Assembly 398 na NODE_74_length_397_cov_0.914815 unplaced-scaffold na na JADPQC010000064.1 = NZ_JADPQC010000064.1 Primary Assembly 397 na NODE_75_length_396_cov_0.903346 unplaced-scaffold na na JADPQC010000065.1 = NZ_JADPQC010000065.1 Primary Assembly 396 na NODE_77_length_394_cov_0.790262 unplaced-scaffold na na JADPQC010000066.1 = NZ_JADPQC010000066.1 Primary Assembly 394 na NODE_78_length_392_cov_0.932075 unplaced-scaffold na na JADPQC010000067.1 = NZ_JADPQC010000067.1 Primary Assembly 392 na NODE_79_length_391_cov_0.723485 unplaced-scaffold na na JADPQC010000068.1 = NZ_JADPQC010000068.1 Primary Assembly 391 na NODE_7_length_126946_cov_62.817 unplaced-scaffold na na JADPQC010000007.1 = NZ_JADPQC010000007.1 Primary Assembly 126946 na NODE_80_length_390_cov_0.942966 unplaced-scaffold na na JADPQC010000069.1 = NZ_JADPQC010000069.1 Primary Assembly 390 na NODE_81_length_390_cov_0.73384 unplaced-scaffold na na JADPQC010000070.1 = NZ_JADPQC010000070.1 Primary Assembly 390 na NODE_82_length_389_cov_0.946565 unplaced-scaffold na na JADPQC010000071.1 = NZ_JADPQC010000071.1 Primary Assembly 389 na NODE_83_length_389_cov_0.946565 unplaced-scaffold na na JADPQC010000072.1 = NZ_JADPQC010000072.1 Primary Assembly 389 na NODE_84_length_387_cov_0.888462 unplaced-scaffold na na JADPQC010000073.1 = NZ_JADPQC010000073.1 Primary Assembly 387 na NODE_85_length_386_cov_0.880309 unplaced-scaffold na na JADPQC010000074.1 = NZ_JADPQC010000074.1 Primary Assembly 386 na NODE_86_length_385_cov_0.96124 unplaced-scaffold na na JADPQC010000075.1 = NZ_JADPQC010000075.1 Primary Assembly 385 na NODE_87_length_382_cov_0.933333 unplaced-scaffold na na JADPQC010000076.1 = NZ_JADPQC010000076.1 Primary Assembly 382 na NODE_88_length_381_cov_0.972441 unplaced-scaffold na na JADPQC010000077.1 = NZ_JADPQC010000077.1 Primary Assembly 381 na NODE_89_length_379_cov_0.980159 unplaced-scaffold na na JADPQC010000078.1 = NZ_JADPQC010000078.1 Primary Assembly 379 na NODE_8_length_91684_cov_57.8111 unplaced-scaffold na na JADPQC010000008.1 = NZ_JADPQC010000008.1 Primary Assembly 91684 na NODE_90_length_379_cov_0.845238 unplaced-scaffold na na JADPQC010000079.1 = NZ_JADPQC010000079.1 Primary Assembly 379 na NODE_91_length_379_cov_0.825397 unplaced-scaffold na na JADPQC010000080.1 = NZ_JADPQC010000080.1 Primary Assembly 379 na NODE_92_length_361_cov_42.5171 unplaced-scaffold na na JADPQC010000081.1 = NZ_JADPQC010000081.1 Primary Assembly 361 na NODE_93_length_242_cov_16.2087 unplaced-scaffold na na JADPQC010000082.1 = NZ_JADPQC010000082.1 Primary Assembly 242 na NODE_94_length_241_cov_9.85088 unplaced-scaffold na na JADPQC010000083.1 = NZ_JADPQC010000083.1 Primary Assembly 241 na NODE_95_length_241_cov_35.7456 unplaced-scaffold na na JADPQC010000084.1 = NZ_JADPQC010000084.1 Primary Assembly 241 na NODE_96_length_202_cov_119.107 unplaced-scaffold na na JADPQC010000085.1 = NZ_JADPQC010000085.1 Primary Assembly 202 na NODE_9_length_87425_cov_61.4411 unplaced-scaffold na na JADPQC010000009.1 = NZ_JADPQC010000009.1 Primary Assembly 87425 na