# Assembly name: ASM1705245v1 # Organism name: Sphingomonas yabuuchiae (a-proteobacteria) # Infraspecific name: strain=DSM 14562 # Taxid: 172044 # BioSample: SAMN17497684 # BioProject: PRJNA633087 # Submitter: Indigo Agriculture # Date: 2021-02-27 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: JAFHKU01 # Assembly method: Megahit v. Version 1.1.2 # Expected final version: yes # Genome coverage: 219.3x # Sequencing technology: Illumina NovaSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_017052455.1 # RefSeq assembly accession: GCF_017052455.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_017052475.1 GCF_017052475.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name k141_4 unplaced-scaffold na na JAFHKU010000001.1 = NZ_JAFHKU010000001.1 Primary Assembly 359 na k141_8 unplaced-scaffold na na JAFHKU010000002.1 = NZ_JAFHKU010000002.1 Primary Assembly 430 na k141_9 unplaced-scaffold na na JAFHKU010000003.1 = NZ_JAFHKU010000003.1 Primary Assembly 280 na k141_10 unplaced-scaffold na na JAFHKU010000004.1 = NZ_JAFHKU010000004.1 Primary Assembly 306 na k141_11 unplaced-scaffold na na JAFHKU010000005.1 = NZ_JAFHKU010000005.1 Primary Assembly 223 na k141_14 unplaced-scaffold na na JAFHKU010000006.1 = NZ_JAFHKU010000006.1 Primary Assembly 335 na k141_15 unplaced-scaffold na na JAFHKU010000007.1 = NZ_JAFHKU010000007.1 Primary Assembly 378 na k141_16 unplaced-scaffold na na JAFHKU010000008.1 = NZ_JAFHKU010000008.1 Primary Assembly 302 na k141_17 unplaced-scaffold na na JAFHKU010000009.1 = NZ_JAFHKU010000009.1 Primary Assembly 313 na k141_18 unplaced-scaffold na na JAFHKU010000010.1 = NZ_JAFHKU010000010.1 Primary Assembly 316 na k141_19 unplaced-scaffold na na JAFHKU010000011.1 = NZ_JAFHKU010000011.1 Primary Assembly 303 na k141_21 unplaced-scaffold na na JAFHKU010000012.1 = NZ_JAFHKU010000012.1 Primary Assembly 283 na k141_23 unplaced-scaffold na na JAFHKU010000013.1 = NZ_JAFHKU010000013.1 Primary Assembly 531 na k141_24 unplaced-scaffold na na JAFHKU010000014.1 = NZ_JAFHKU010000014.1 Primary Assembly 337 na k141_25 unplaced-scaffold na na JAFHKU010000015.1 = NZ_JAFHKU010000015.1 Primary Assembly 336 na k141_26 unplaced-scaffold na na JAFHKU010000016.1 = NZ_JAFHKU010000016.1 Primary Assembly 222 na k141_27 unplaced-scaffold na na JAFHKU010000017.1 = NZ_JAFHKU010000017.1 Primary Assembly 401 na k141_28 unplaced-scaffold na na JAFHKU010000018.1 = NZ_JAFHKU010000018.1 Primary Assembly 311 na k141_29 unplaced-scaffold na na JAFHKU010000019.1 = NZ_JAFHKU010000019.1 Primary Assembly 792 na k141_30 unplaced-scaffold na na JAFHKU010000020.1 = NZ_JAFHKU010000020.1 Primary Assembly 534 na k141_31 unplaced-scaffold na na JAFHKU010000021.1 = NZ_JAFHKU010000021.1 Primary Assembly 318 na k141_32 unplaced-scaffold na na JAFHKU010000022.1 = NZ_JAFHKU010000022.1 Primary Assembly 201 na k141_33 unplaced-scaffold na na JAFHKU010000023.1 = NZ_JAFHKU010000023.1 Primary Assembly 391 na k141_34 unplaced-scaffold na na JAFHKU010000024.1 = NZ_JAFHKU010000024.1 Primary Assembly 604 na k141_35 unplaced-scaffold na na JAFHKU010000025.1 = NZ_JAFHKU010000025.1 Primary Assembly 397 na k141_36 unplaced-scaffold na na JAFHKU010000026.1 = NZ_JAFHKU010000026.1 Primary Assembly 869 na k141_37 unplaced-scaffold na na JAFHKU010000027.1 = NZ_JAFHKU010000027.1 Primary Assembly 327 na k141_38 unplaced-scaffold na na JAFHKU010000028.1 = NZ_JAFHKU010000028.1 Primary Assembly 997 na k141_39 unplaced-scaffold na na JAFHKU010000029.1 = NZ_JAFHKU010000029.1 Primary Assembly 1240 na k141_40 unplaced-scaffold na na JAFHKU010000030.1 = NZ_JAFHKU010000030.1 Primary Assembly 811 na k141_41 unplaced-scaffold na na JAFHKU010000031.1 = NZ_JAFHKU010000031.1 Primary Assembly 1404 na k141_42 unplaced-scaffold na na JAFHKU010000032.1 = NZ_JAFHKU010000032.1 Primary Assembly 1624 na k141_43 unplaced-scaffold na na JAFHKU010000033.1 = NZ_JAFHKU010000033.1 Primary Assembly 1510 na k141_44 unplaced-scaffold na na JAFHKU010000034.1 = NZ_JAFHKU010000034.1 Primary Assembly 335 na k141_45 unplaced-scaffold na na JAFHKU010000035.1 = NZ_JAFHKU010000035.1 Primary Assembly 1607 na k141_46 unplaced-scaffold na na JAFHKU010000036.1 = NZ_JAFHKU010000036.1 Primary Assembly 2036 na k141_48 unplaced-scaffold na na JAFHKU010000037.1 = NZ_JAFHKU010000037.1 Primary Assembly 4453 na k141_49 unplaced-scaffold na na JAFHKU010000038.1 = NZ_JAFHKU010000038.1 Primary Assembly 651 na k141_51 unplaced-scaffold na na JAFHKU010000039.1 = NZ_JAFHKU010000039.1 Primary Assembly 245 na k141_52 unplaced-scaffold na na JAFHKU010000040.1 = NZ_JAFHKU010000040.1 Primary Assembly 4173 na k141_53 unplaced-scaffold na na JAFHKU010000041.1 = NZ_JAFHKU010000041.1 Primary Assembly 5814 na k141_54 unplaced-scaffold na na JAFHKU010000042.1 = NZ_JAFHKU010000042.1 Primary Assembly 327 na k141_55 unplaced-scaffold na na JAFHKU010000043.1 = NZ_JAFHKU010000043.1 Primary Assembly 634 na k141_56 unplaced-scaffold na na JAFHKU010000044.1 = NZ_JAFHKU010000044.1 Primary Assembly 327 na k141_57 unplaced-scaffold na na JAFHKU010000045.1 = NZ_JAFHKU010000045.1 Primary Assembly 5735 na k141_58 unplaced-scaffold na na JAFHKU010000046.1 = NZ_JAFHKU010000046.1 Primary Assembly 246 na k141_59 unplaced-scaffold na na JAFHKU010000047.1 = NZ_JAFHKU010000047.1 Primary Assembly 5999 na k141_60 unplaced-scaffold na na JAFHKU010000048.1 = NZ_JAFHKU010000048.1 Primary Assembly 205 na k141_61 unplaced-scaffold na na JAFHKU010000049.1 = NZ_JAFHKU010000049.1 Primary Assembly 373 na k141_62 unplaced-scaffold na na JAFHKU010000050.1 = NZ_JAFHKU010000050.1 Primary Assembly 308 na k141_63 unplaced-scaffold na na JAFHKU010000051.1 = NZ_JAFHKU010000051.1 Primary Assembly 346 na k141_65 unplaced-scaffold na na JAFHKU010000052.1 = NZ_JAFHKU010000052.1 Primary Assembly 326 na k141_66 unplaced-scaffold na na JAFHKU010000053.1 = NZ_JAFHKU010000053.1 Primary Assembly 1636 na k141_67 unplaced-scaffold na na JAFHKU010000054.1 = NZ_JAFHKU010000054.1 Primary Assembly 4636 na k141_68 unplaced-scaffold na na JAFHKU010000055.1 = NZ_JAFHKU010000055.1 Primary Assembly 3274 na k141_69 unplaced-scaffold na na JAFHKU010000056.1 = NZ_JAFHKU010000056.1 Primary Assembly 5452 na k141_70 unplaced-scaffold na na JAFHKU010000057.1 = NZ_JAFHKU010000057.1 Primary Assembly 12300 na k141_71 unplaced-scaffold na na JAFHKU010000058.1 = NZ_JAFHKU010000058.1 Primary Assembly 283 na k141_72 unplaced-scaffold na na JAFHKU010000059.1 = NZ_JAFHKU010000059.1 Primary Assembly 280 na k141_73 unplaced-scaffold na na JAFHKU010000060.1 = NZ_JAFHKU010000060.1 Primary Assembly 283 na k141_74 unplaced-scaffold na na JAFHKU010000061.1 = NZ_JAFHKU010000061.1 Primary Assembly 13309 na k141_75 unplaced-scaffold na na JAFHKU010000062.1 = NZ_JAFHKU010000062.1 Primary Assembly 7818 na k141_76 unplaced-scaffold na na JAFHKU010000063.1 = NZ_JAFHKU010000063.1 Primary Assembly 5358 na k141_77 unplaced-scaffold na na JAFHKU010000064.1 = NZ_JAFHKU010000064.1 Primary Assembly 457 na k141_78 unplaced-scaffold na na JAFHKU010000065.1 = NZ_JAFHKU010000065.1 Primary Assembly 283 na k141_79 unplaced-scaffold na na JAFHKU010000066.1 = NZ_JAFHKU010000066.1 Primary Assembly 5182 na k141_80 unplaced-scaffold na na JAFHKU010000067.1 = NZ_JAFHKU010000067.1 Primary Assembly 9856 na k141_81 unplaced-scaffold na na JAFHKU010000068.1 = NZ_JAFHKU010000068.1 Primary Assembly 301 na k141_82 unplaced-scaffold na na JAFHKU010000069.1 = NZ_JAFHKU010000069.1 Primary Assembly 5444 na k141_84 unplaced-scaffold na na JAFHKU010000070.1 = NZ_JAFHKU010000070.1 Primary Assembly 900 na k141_85 unplaced-scaffold na na JAFHKU010000071.1 = NZ_JAFHKU010000071.1 Primary Assembly 309 na k141_86 unplaced-scaffold na na JAFHKU010000072.1 = NZ_JAFHKU010000072.1 Primary Assembly 201 na k141_87 unplaced-scaffold na na JAFHKU010000073.1 = NZ_JAFHKU010000073.1 Primary Assembly 1624 na k141_88 unplaced-scaffold na na JAFHKU010000074.1 = NZ_JAFHKU010000074.1 Primary Assembly 27185 na k141_89 unplaced-scaffold na na JAFHKU010000075.1 = NZ_JAFHKU010000075.1 Primary Assembly 5635 na k141_92 unplaced-scaffold na na JAFHKU010000076.1 = NZ_JAFHKU010000076.1 Primary Assembly 29226 na k141_93 unplaced-scaffold na na JAFHKU010000077.1 = NZ_JAFHKU010000077.1 Primary Assembly 448 na k141_94 unplaced-scaffold na na JAFHKU010000078.1 = NZ_JAFHKU010000078.1 Primary Assembly 315 na k141_95 unplaced-scaffold na na JAFHKU010000079.1 = NZ_JAFHKU010000079.1 Primary Assembly 318 na k141_96 unplaced-scaffold na na JAFHKU010000080.1 = NZ_JAFHKU010000080.1 Primary Assembly 382 na k141_97 unplaced-scaffold na na JAFHKU010000081.1 = NZ_JAFHKU010000081.1 Primary Assembly 6046 na k141_98 unplaced-scaffold na na JAFHKU010000082.1 = NZ_JAFHKU010000082.1 Primary Assembly 1462 na k141_99 unplaced-scaffold na na JAFHKU010000083.1 = NZ_JAFHKU010000083.1 Primary Assembly 1270 na k141_100 unplaced-scaffold na na JAFHKU010000084.1 = NZ_JAFHKU010000084.1 Primary Assembly 280 na k141_101 unplaced-scaffold na na JAFHKU010000085.1 = NZ_JAFHKU010000085.1 Primary Assembly 273 na k141_103 unplaced-scaffold na na JAFHKU010000086.1 = NZ_JAFHKU010000086.1 Primary Assembly 4763 na k141_104 unplaced-scaffold na na JAFHKU010000087.1 = NZ_JAFHKU010000087.1 Primary Assembly 207 na k141_105 unplaced-scaffold na na JAFHKU010000088.1 = NZ_JAFHKU010000088.1 Primary Assembly 17378 na k141_107 unplaced-scaffold na na JAFHKU010000089.1 = NZ_JAFHKU010000089.1 Primary Assembly 26345 na k141_108 unplaced-scaffold na na JAFHKU010000090.1 = NZ_JAFHKU010000090.1 Primary Assembly 26074 na k141_109 unplaced-scaffold na na JAFHKU010000091.1 = NZ_JAFHKU010000091.1 Primary Assembly 2187 na k141_110 unplaced-scaffold na na JAFHKU010000092.1 = NZ_JAFHKU010000092.1 Primary Assembly 1152 na k141_111 unplaced-scaffold na na JAFHKU010000093.1 = NZ_JAFHKU010000093.1 Primary Assembly 17878 na k141_112 unplaced-scaffold na na JAFHKU010000094.1 = NZ_JAFHKU010000094.1 Primary Assembly 1019 na k141_113 unplaced-scaffold na na JAFHKU010000095.1 = NZ_JAFHKU010000095.1 Primary Assembly 3617 na k141_114 unplaced-scaffold na na JAFHKU010000096.1 = NZ_JAFHKU010000096.1 Primary Assembly 29059 na k141_115 unplaced-scaffold na na JAFHKU010000097.1 = NZ_JAFHKU010000097.1 Primary Assembly 24942 na k141_116 unplaced-scaffold na na JAFHKU010000098.1 = NZ_JAFHKU010000098.1 Primary Assembly 30122 na k141_117 unplaced-scaffold na na JAFHKU010000099.1 = NZ_JAFHKU010000099.1 Primary Assembly 39113 na k141_119 unplaced-scaffold na na JAFHKU010000100.1 = NZ_JAFHKU010000100.1 Primary Assembly 344 na k141_120 unplaced-scaffold na na JAFHKU010000101.1 = NZ_JAFHKU010000101.1 Primary Assembly 315 na k141_121 unplaced-scaffold na na JAFHKU010000102.1 = NZ_JAFHKU010000102.1 Primary Assembly 18100 na k141_122 unplaced-scaffold na na JAFHKU010000103.1 = NZ_JAFHKU010000103.1 Primary Assembly 2377 na k141_123 unplaced-scaffold na na JAFHKU010000104.1 = NZ_JAFHKU010000104.1 Primary Assembly 638 na k141_124 unplaced-scaffold na na JAFHKU010000105.1 = NZ_JAFHKU010000105.1 Primary Assembly 1018 na k141_125 unplaced-scaffold na na JAFHKU010000106.1 = NZ_JAFHKU010000106.1 Primary Assembly 1895 na k141_126 unplaced-scaffold na na JAFHKU010000107.1 = NZ_JAFHKU010000107.1 Primary Assembly 45505 na k141_128 unplaced-scaffold na na JAFHKU010000108.1 = NZ_JAFHKU010000108.1 Primary Assembly 31432 na k141_129 unplaced-scaffold na na JAFHKU010000109.1 = NZ_JAFHKU010000109.1 Primary Assembly 92190 na k141_130 unplaced-scaffold na na JAFHKU010000110.1 = NZ_JAFHKU010000110.1 Primary Assembly 62710 na k141_131 unplaced-scaffold na na JAFHKU010000111.1 = NZ_JAFHKU010000111.1 Primary Assembly 227 na k141_132 unplaced-scaffold na na JAFHKU010000112.1 = NZ_JAFHKU010000112.1 Primary Assembly 33358 na k141_133 unplaced-scaffold na na JAFHKU010000113.1 = NZ_JAFHKU010000113.1 Primary Assembly 380 na k141_134 unplaced-scaffold na na JAFHKU010000114.1 = NZ_JAFHKU010000114.1 Primary Assembly 55229 na k141_135 unplaced-scaffold na na JAFHKU010000115.1 = NZ_JAFHKU010000115.1 Primary Assembly 65600 na k141_136 unplaced-scaffold na na JAFHKU010000116.1 = NZ_JAFHKU010000116.1 Primary Assembly 25002 na k141_137 unplaced-scaffold na na JAFHKU010000117.1 = NZ_JAFHKU010000117.1 Primary Assembly 106615 na k141_138 unplaced-scaffold na na JAFHKU010000118.1 = NZ_JAFHKU010000118.1 Primary Assembly 97039 na k141_139 unplaced-scaffold na na JAFHKU010000119.1 = NZ_JAFHKU010000119.1 Primary Assembly 2782 na k141_140 unplaced-scaffold na na JAFHKU010000120.1 = NZ_JAFHKU010000120.1 Primary Assembly 384 na k141_141 unplaced-scaffold na na JAFHKU010000121.1 = NZ_JAFHKU010000121.1 Primary Assembly 73045 na k141_142 unplaced-scaffold na na JAFHKU010000122.1 = NZ_JAFHKU010000122.1 Primary Assembly 190100 na k141_144 unplaced-scaffold na na JAFHKU010000123.1 = NZ_JAFHKU010000123.1 Primary Assembly 212227 na k141_145 unplaced-scaffold na na JAFHKU010000124.1 = NZ_JAFHKU010000124.1 Primary Assembly 3600 na k141_146 unplaced-scaffold na na JAFHKU010000125.1 = NZ_JAFHKU010000125.1 Primary Assembly 135153 na k141_147 unplaced-scaffold na na JAFHKU010000126.1 = NZ_JAFHKU010000126.1 Primary Assembly 61989 na k141_148 unplaced-scaffold na na JAFHKU010000127.1 = NZ_JAFHKU010000127.1 Primary Assembly 200426 na k141_149 unplaced-scaffold na na JAFHKU010000128.1 = NZ_JAFHKU010000128.1 Primary Assembly 226772 na k141_150 unplaced-scaffold na na JAFHKU010000129.1 = NZ_JAFHKU010000129.1 Primary Assembly 563 na k141_151 unplaced-scaffold na na JAFHKU010000130.1 = NZ_JAFHKU010000130.1 Primary Assembly 123168 na k141_152 unplaced-scaffold na na JAFHKU010000131.1 = NZ_JAFHKU010000131.1 Primary Assembly 466134 na k141_153 unplaced-scaffold na na JAFHKU010000132.1 = NZ_JAFHKU010000132.1 Primary Assembly 357403 na k141_154 unplaced-scaffold na na JAFHKU010000133.1 = NZ_JAFHKU010000133.1 Primary Assembly 688333 na k141_155 unplaced-scaffold na na JAFHKU010000134.1 = NZ_JAFHKU010000134.1 Primary Assembly 279 na k141_158 unplaced-scaffold na na JAFHKU010000135.1 = NZ_JAFHKU010000135.1 Primary Assembly 407903 na