# Assembly name: ASM1473649v1 # Organism name: Candidatus Dactylopiibacterium carminicum (b-proteobacteria) # Isolate: END1 # Taxid: 857335 # BioSample: SAMN05607942 # BioProject: PRJNA339839 # Submitter: Universidad Nacional Autonoma de Mexico # Date: 2020-09-24 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: MDUX01 # Assembly method: MetaVelvet v. 1.2; Newbler v. 2.7; SPAdes v. 3.5; HGAP v. 2; SeqManPro v. 8 # Expected final version: no # Genome coverage: 50.0x # Sequencing technology: 454; Illumina HiSeq; PacBio # RefSeq category: Reference Genome # GenBank assembly accession: GCA_014736495.1 # RefSeq assembly accession: GCF_014736495.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_014736505.1 GCF_014736505.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_11_length_137584_cov_6.95087_ID_19 unplaced-scaffold na na MDUX01000001.1 = NZ_MDUX01000001.1 Primary Assembly 137584 na NODE_12_length_136487_cov_12.6804_ID_29 unplaced-scaffold na na MDUX01000002.1 = NZ_MDUX01000002.1 Primary Assembly 136487 na NODE_28_length_119602_cov_6.95675_ID_79 unplaced-scaffold na na MDUX01000003.1 = NZ_MDUX01000003.1 Primary Assembly 119603 na NODE_59_length_100531_cov_6.70813_ID_165 unplaced-scaffold na na MDUX01000004.1 = NZ_MDUX01000004.1 Primary Assembly 100531 na NODE_69_length_98290_cov_6.46222_ID_191 unplaced-scaffold na na MDUX01000005.1 = NZ_MDUX01000005.1 Primary Assembly 98290 na NODE_106_length_90329_cov_7.03585_ID_305 unplaced-scaffold na na MDUX01000006.1 = NZ_MDUX01000006.1 Primary Assembly 90329 na NODE_130_length_87885_cov_9.27448_ID_359 unplaced-scaffold na na MDUX01000007.1 = NZ_MDUX01000007.1 Primary Assembly 87887 na NODE_133_length_87351_cov_9.68434_ID_365 unplaced-scaffold na na MDUX01000008.1 = NZ_MDUX01000008.1 Primary Assembly 87351 na NODE_173_length_81734_cov_7.12716_ID_459 unplaced-scaffold na na MDUX01000009.1 = NZ_MDUX01000009.1 Primary Assembly 81734 na NODE_191_length_79391_cov_6.8123_ID_503 unplaced-scaffold na na MDUX01000010.1 = NZ_MDUX01000010.1 Primary Assembly 79391 na NODE_199_length_78329_cov_6.7618_ID_527 unplaced-scaffold na na MDUX01000011.1 = NZ_MDUX01000011.1 Primary Assembly 78329 na NODE_242_length_74072_cov_6.82193_ID_635 unplaced-scaffold na na MDUX01000012.1 = NZ_MDUX01000012.1 Primary Assembly 74072 na NODE_278_length_71182_cov_6.61368_ID_717 unplaced-scaffold na na MDUX01000013.1 = NZ_MDUX01000013.1 Primary Assembly 71182 na NODE_382_length_65889_cov_7.1956_ID_949 unplaced-scaffold na na MDUX01000014.1 = NZ_MDUX01000014.1 Primary Assembly 65889 na NODE_475_length_61169_cov_7.29592_ID_1169 unplaced-scaffold na na MDUX01000015.1 = NZ_MDUX01000015.1 Primary Assembly 61169 na NODE_518_length_59481_cov_6.9585_ID_1253 unplaced-scaffold na na MDUX01000016.1 = NZ_MDUX01000016.1 Primary Assembly 59481 na NODE_567_length_58047_cov_6.60929_ID_1369 unplaced-scaffold na na MDUX01000017.1 = NZ_MDUX01000017.1 Primary Assembly 58066 na NODE_571_length_57955_cov_7.90401_ID_1377 unplaced-scaffold na na MDUX01000018.1 = NZ_MDUX01000018.1 Primary Assembly 57955 na NODE_581_length_57632_cov_6.86496_ID_1401 unplaced-scaffold na na MDUX01000019.1 = NZ_MDUX01000019.1 Primary Assembly 57632 na NODE_607_length_56763_cov_5.95491_ID_1473 unplaced-scaffold na na MDUX01000020.1 = NZ_MDUX01000020.1 Primary Assembly 56767 na NODE_615_length_56574_cov_6.62404_ID_1487 unplaced-scaffold na na MDUX01000021.1 = NZ_MDUX01000021.1 Primary Assembly 56574 na NODE_641_length_55374_cov_6.8656_ID_1555 unplaced-scaffold na na MDUX01000022.1 = NZ_MDUX01000022.1 Primary Assembly 55374 na NODE_853_length_50206_cov_6.9604_ID_2039 unplaced-scaffold na na MDUX01000023.1 = NZ_MDUX01000023.1 Primary Assembly 50206 na NODE_867_length_49892_cov_8.57909_ID_2085 unplaced-scaffold na na MDUX01000024.1 = NZ_MDUX01000024.1 Primary Assembly 49892 na NODE_872_length_49780_cov_7.87475_ID_2095 unplaced-scaffold na na MDUX01000025.1 = NZ_MDUX01000025.1 Primary Assembly 49780 na NODE_923_length_48539_cov_6.25363_ID_2201 unplaced-scaffold na na MDUX01000026.1 = NZ_MDUX01000026.1 Primary Assembly 48539 na NODE_1208_length_43622_cov_19.6961_ID_2773 unplaced-scaffold na na MDUX01000027.1 = NZ_MDUX01000027.1 Primary Assembly 43622 na NODE_1261_length_42786_cov_7.23685_ID_2897 unplaced-scaffold na na MDUX01000028.1 = NZ_MDUX01000028.1 Primary Assembly 42789 na NODE_1318_length_42026_cov_11.0679_ID_3021 unplaced-scaffold na na MDUX01000029.1 = NZ_MDUX01000029.1 Primary Assembly 42026 na NODE_1428_length_40679_cov_6.10509_ID_3255 unplaced-scaffold na na MDUX01000030.1 = NZ_MDUX01000030.1 Primary Assembly 40679 na NODE_1513_length_39719_cov_6.44953_ID_3449 unplaced-scaffold na na MDUX01000031.1 = NZ_MDUX01000031.1 Primary Assembly 39719 na NODE_1731_length_37593_cov_14.0097_ID_3927 unplaced-scaffold na na MDUX01000032.1 = NZ_MDUX01000032.1 Primary Assembly 37593 na NODE_1745_length_37439_cov_7.40199_ID_3967 unplaced-scaffold na na MDUX01000033.1 = NZ_MDUX01000033.1 Primary Assembly 37439 na NODE_2009_length_34863_cov_7.15137_ID_4531 unplaced-scaffold na na MDUX01000034.1 = NZ_MDUX01000034.1 Primary Assembly 34863 na NODE_2012_length_34835_cov_6.47223_ID_4541 unplaced-scaffold na na MDUX01000035.1 = NZ_MDUX01000035.1 Primary Assembly 34835 na NODE_2098_length_34220_cov_7.06261_ID_4703 unplaced-scaffold na na MDUX01000036.1 = NZ_MDUX01000036.1 Primary Assembly 34220 na NODE_2216_length_33386_cov_6.80103_ID_4963 unplaced-scaffold na na MDUX01000037.1 = NZ_MDUX01000037.1 Primary Assembly 33386 na NODE_2222_length_33365_cov_7.12156_ID_4975 unplaced-scaffold na na MDUX01000038.1 = NZ_MDUX01000038.1 Primary Assembly 33365 na NODE_2226_length_33338_cov_7.09122_ID_4987 unplaced-scaffold na na MDUX01000039.1 = NZ_MDUX01000039.1 Primary Assembly 33338 na NODE_2295_length_32836_cov_7.02553_ID_5129 unplaced-scaffold na na MDUX01000040.1 = NZ_MDUX01000040.1 Primary Assembly 32836 na NODE_2296_length_32826_cov_6.67441_ID_5131 unplaced-scaffold na na MDUX01000041.1 = NZ_MDUX01000041.1 Primary Assembly 32826 na NODE_2460_length_31893_cov_7.27621_ID_5469 unplaced-scaffold na na MDUX01000042.1 = NZ_MDUX01000042.1 Primary Assembly 31893 na NODE_2511_length_31613_cov_7.66699_ID_5573 unplaced-scaffold na na MDUX01000043.1 = NZ_MDUX01000043.1 Primary Assembly 31613 na NODE_2691_length_30540_cov_19.0008_ID_5939 unplaced-scaffold na na MDUX01000044.1 = NZ_MDUX01000044.1 Primary Assembly 30540 na NODE_2717_length_30404_cov_7.21256_ID_6003 unplaced-scaffold na na MDUX01000045.1 = NZ_MDUX01000045.1 Primary Assembly 30404 na NODE_2861_length_29571_cov_6.57999_ID_6295 unplaced-scaffold na na MDUX01000046.1 = NZ_MDUX01000046.1 Primary Assembly 29571 na NODE_2867_length_29518_cov_7.00305_ID_6313 unplaced-scaffold na na MDUX01000047.1 = NZ_MDUX01000047.1 Primary Assembly 29518 na NODE_2954_length_28988_cov_9.55376_ID_6481 unplaced-scaffold na na MDUX01000048.1 = NZ_MDUX01000048.1 Primary Assembly 28988 na NODE_3057_length_28385_cov_6.51571_ID_6701 unplaced-scaffold na na MDUX01000049.1 = NZ_MDUX01000049.1 Primary Assembly 28385 na NODE_3394_length_26828_cov_9.59067_ID_7403 unplaced-scaffold na na MDUX01000050.1 = NZ_MDUX01000050.1 Primary Assembly 26828 na NODE_3415_length_26727_cov_6.71671_ID_7443 unplaced-scaffold na na MDUX01000051.1 = NZ_MDUX01000051.1 Primary Assembly 26727 na NODE_3609_length_25873_cov_21.1471_ID_7869 unplaced-scaffold na na MDUX01000052.1 = NZ_MDUX01000052.1 Primary Assembly 25873 na NODE_3642_length_25718_cov_9.47722_ID_7931 unplaced-scaffold na na MDUX01000053.1 = NZ_MDUX01000053.1 Primary Assembly 25718 na NODE_3647_length_25692_cov_9.70114_ID_7941 unplaced-scaffold na na MDUX01000054.1 = NZ_MDUX01000054.1 Primary Assembly 25692 na NODE_3721_length_25335_cov_20.402_ID_8099 unplaced-scaffold na na MDUX01000055.1 = NZ_MDUX01000055.1 Primary Assembly 25335 na NODE_3781_length_25136_cov_13.3226_ID_8211 unplaced-scaffold na na MDUX01000056.1 = NZ_MDUX01000056.1 Primary Assembly 25136 na NODE_3836_length_24912_cov_30.1816_ID_8333 unplaced-scaffold na na MDUX01000057.1 = NZ_MDUX01000057.1 Primary Assembly 24912 na NODE_4367_length_22880_cov_13.3424_ID_9441 unplaced-scaffold na na MDUX01000058.1 = NZ_MDUX01000058.1 Primary Assembly 22885 na NODE_4567_length_22177_cov_14.0343_ID_9873 unplaced-scaffold na na MDUX01000059.1 = NZ_MDUX01000059.1 Primary Assembly 22177 na NODE_4575_length_22167_cov_7.0383_ID_9889 unplaced-scaffold na na MDUX01000060.1 = NZ_MDUX01000060.1 Primary Assembly 22167 na NODE_4612_length_22064_cov_20.1717_ID_9971 unplaced-scaffold na na MDUX01000061.1 = NZ_MDUX01000061.1 Primary Assembly 22064 na NODE_5289_length_19987_cov_10.1062_ID_11369 unplaced-scaffold na na MDUX01000062.1 = NZ_MDUX01000062.1 Primary Assembly 19987 na NODE_5311_length_19928_cov_10.7382_ID_11411 unplaced-scaffold na na MDUX01000063.1 = NZ_MDUX01000063.1 Primary Assembly 19928 na NODE_6144_length_17591_cov_16.2285_ID_13091 unplaced-scaffold na na MDUX01000064.1 = NZ_MDUX01000064.1 Primary Assembly 17591 na NODE_6232_length_17339_cov_11.8531_ID_13273 unplaced-scaffold na na MDUX01000065.1 = NZ_MDUX01000065.1 Primary Assembly 17339 na NODE_6502_length_16672_cov_11.375_ID_13803 unplaced-scaffold na na MDUX01000066.1 = NZ_MDUX01000066.1 Primary Assembly 16672 na NODE_6672_length_16289_cov_6.85333_ID_14149 unplaced-scaffold na na MDUX01000067.1 = NZ_MDUX01000067.1 Primary Assembly 16289 na NODE_6964_length_15557_cov_7.29654_ID_14743 unplaced-scaffold na na MDUX01000068.1 = NZ_MDUX01000068.1 Primary Assembly 15557 na NODE_6978_length_15538_cov_16.9801_ID_14769 unplaced-scaffold na na MDUX01000069.1 = NZ_MDUX01000069.1 Primary Assembly 15538 na NODE_7021_length_15458_cov_6.18652_ID_14861 unplaced-scaffold na na MDUX01000070.1 = NZ_MDUX01000070.1 Primary Assembly 15458 na NODE_7196_length_15104_cov_6.92019_ID_15203 unplaced-scaffold na na MDUX01000071.1 = NZ_MDUX01000071.1 Primary Assembly 15104 na NODE_7520_length_14437_cov_19.7362_ID_15845 unplaced-scaffold na na MDUX01000072.1 = NZ_MDUX01000072.1 Primary Assembly 14437 na NODE_7602_length_14269_cov_6.33537_ID_16037 unplaced-scaffold na na MDUX01000073.1 = NZ_MDUX01000073.1 Primary Assembly 14269 na NODE_7922_length_13626_cov_7.05276_ID_16683 unplaced-scaffold na na MDUX01000074.1 = NZ_MDUX01000074.1 Primary Assembly 13626 na NODE_7998_length_13476_cov_6.936_ID_16839 unplaced-scaffold na na MDUX01000075.1 = NZ_MDUX01000075.1 Primary Assembly 13476 na NODE_8113_length_13269_cov_6.63758_ID_17083 unplaced-scaffold na na MDUX01000076.1 = NZ_MDUX01000076.1 Primary Assembly 13269 na NODE_8196_length_13105_cov_12.8558_ID_17247 unplaced-scaffold na na MDUX01000077.1 = NZ_MDUX01000077.1 Primary Assembly 13105 na NODE_8260_length_12987_cov_13.1651_ID_17373 unplaced-scaffold na na MDUX01000078.1 = NZ_MDUX01000078.1 Primary Assembly 12987 na NODE_8906_length_11954_cov_14.3055_ID_18671 unplaced-scaffold na na MDUX01000079.1 = NZ_MDUX01000079.1 Primary Assembly 11954 na NODE_9087_length_11642_cov_6.39682_ID_19039 unplaced-scaffold na na MDUX01000080.1 = NZ_MDUX01000080.1 Primary Assembly 11642 na NODE_9164_length_11526_cov_13.8562_ID_19193 unplaced-scaffold na na MDUX01000081.1 = NZ_MDUX01000081.1 Primary Assembly 11526 na NODE_9452_length_11081_cov_13.5415_ID_19765 unplaced-scaffold na na MDUX01000082.1 = NZ_MDUX01000082.1 Primary Assembly 11081 na NODE_10088_length_10141_cov_6.41682_ID_21063 unplaced-scaffold na na MDUX01000083.1 = NZ_MDUX01000083.1 Primary Assembly 10141 na NODE_10155_length_10063_cov_15.1436_ID_21193 unplaced-scaffold na na MDUX01000084.1 = NZ_MDUX01000084.1 Primary Assembly 10063 na NODE_10657_length_9405_cov_6.94043_ID_22175 unplaced-scaffold na na MDUX01000085.1 = NZ_MDUX01000085.1 Primary Assembly 9405 na NODE_10957_length_9026_cov_16.1925_ID_22761 unplaced-scaffold na na MDUX01000086.1 = NZ_MDUX01000086.1 Primary Assembly 9026 na NODE_11148_length_8802_cov_16.1354_ID_23131 unplaced-scaffold na na MDUX01000087.1 = NZ_MDUX01000087.1 Primary Assembly 8802 na NODE_11221_length_8695_cov_16.1032_ID_23287 unplaced-scaffold na na MDUX01000088.1 = NZ_MDUX01000088.1 Primary Assembly 8700 na NODE_11396_length_8484_cov_16.3807_ID_23629 unplaced-scaffold na na MDUX01000089.1 = NZ_MDUX01000089.1 Primary Assembly 8484 na NODE_11581_length_8281_cov_8.21225_ID_23997 unplaced-scaffold na na MDUX01000090.1 = NZ_MDUX01000090.1 Primary Assembly 8281 na NODE_11753_length_8099_cov_6.76231_ID_24327 unplaced-scaffold na na MDUX01000091.1 = NZ_MDUX01000091.1 Primary Assembly 8099 na NODE_11958_length_7871_cov_7.00205_ID_24723 unplaced-scaffold na na MDUX01000092.1 = NZ_MDUX01000092.1 Primary Assembly 7871 na NODE_12031_length_7781_cov_11.857_ID_17 unplaced-scaffold na na MDUX01000093.1 = NZ_MDUX01000093.1 Primary Assembly 7781 na NODE_12070_length_7740_cov_17.5866_ID_24943 unplaced-scaffold na na MDUX01000094.1 = NZ_MDUX01000094.1 Primary Assembly 7740 na NODE_12094_length_7718_cov_6.98238_ID_24991 unplaced-scaffold na na MDUX01000095.1 = NZ_MDUX01000095.1 Primary Assembly 7718 na NODE_12111_length_7697_cov_6.65598_ID_25023 unplaced-scaffold na na MDUX01000096.1 = NZ_MDUX01000096.1 Primary Assembly 7697 na NODE_12540_length_7240_cov_6.47599_ID_25851 unplaced-scaffold na na MDUX01000097.1 = NZ_MDUX01000097.1 Primary Assembly 7240 na NODE_13424_length_6352_cov_58.97_ID_27573 unplaced-scaffold na na MDUX01000098.1 = NZ_MDUX01000098.1 Primary Assembly 6352 na NODE_14184_length_5660_cov_6.57431_ID_29081 unplaced-scaffold na na MDUX01000099.1 = NZ_MDUX01000099.1 Primary Assembly 5660 na NODE_14214_length_5629_cov_19.8893_ID_29137 unplaced-scaffold na na MDUX01000100.1 = NZ_MDUX01000100.1 Primary Assembly 5629 na NODE_14714_length_5214_cov_22.0504_ID_30101 unplaced-scaffold na na MDUX01000101.1 = NZ_MDUX01000101.1 Primary Assembly 5214 na NODE_14889_length_5082_cov_23.0173_ID_30443 unplaced-scaffold na na MDUX01000102.1 = NZ_MDUX01000102.1 Primary Assembly 5082 na NODE_15072_length_4941_cov_6.48711_ID_30801 unplaced-scaffold na na MDUX01000103.1 = NZ_MDUX01000103.1 Primary Assembly 4941 na NODE_15135_length_4895_cov_24.2477_ID_30919 unplaced-scaffold na na MDUX01000104.1 = NZ_MDUX01000104.1 Primary Assembly 4895 na NODE_15601_length_4553_cov_24.2021_ID_31835 unplaced-scaffold na na MDUX01000105.1 = NZ_MDUX01000105.1 Primary Assembly 4553 na NODE_15910_length_4340_cov_6.88915_ID_32423 unplaced-scaffold na na MDUX01000106.1 = NZ_MDUX01000106.1 Primary Assembly 4340 na NODE_16408_length_4012_cov_8.16755_ID_33403 unplaced-scaffold na na MDUX01000107.1 = NZ_MDUX01000107.1 Primary Assembly 4012 na NODE_16569_length_3907_cov_7.03453_ID_33715 unplaced-scaffold na na MDUX01000108.1 = NZ_MDUX01000108.1 Primary Assembly 3907 na NODE_16709_length_3823_cov_28.8015_ID_33981 unplaced-scaffold na na MDUX01000109.1 = NZ_MDUX01000109.1 Primary Assembly 3823 na NODE_17422_length_3377_cov_7.06291_ID_35365 unplaced-scaffold na na MDUX01000110.1 = NZ_MDUX01000110.1 Primary Assembly 3377 na NODE_17575_length_3279_cov_7.07754_ID_35663 unplaced-scaffold na na MDUX01000111.1 = NZ_MDUX01000111.1 Primary Assembly 3279 na NODE_17855_length_3112_cov_6.40497_ID_36197 unplaced-scaffold na na MDUX01000112.1 = NZ_MDUX01000112.1 Primary Assembly 3112 na NODE_18215_length_2902_cov_12.955_ID_36897 unplaced-scaffold na na MDUX01000113.1 = NZ_MDUX01000113.1 Primary Assembly 2902 na NODE_18223_length_2894_cov_7.94998_ID_36911 unplaced-scaffold na na MDUX01000114.1 = NZ_MDUX01000114.1 Primary Assembly 2894 na NODE_18260_length_2877_cov_7.47874_ID_36981 unplaced-scaffold na na MDUX01000115.1 = NZ_MDUX01000115.1 Primary Assembly 2877 na NODE_18476_length_2766_cov_36.952_ID_37395 unplaced-scaffold na na MDUX01000116.1 = NZ_MDUX01000116.1 Primary Assembly 2766 na NODE_18788_length_2607_cov_8.89185_ID_38013 unplaced-scaffold na na MDUX01000117.1 = NZ_MDUX01000117.1 Primary Assembly 2607 na NODE_19170_length_2439_cov_39.8482_ID_38751 unplaced-scaffold na na MDUX01000118.1 = NZ_MDUX01000118.1 Primary Assembly 2439 na NODE_20175_length_2006_cov_49.3178_ID_40735 unplaced-scaffold na na MDUX01000119.1 = NZ_MDUX01000119.1 Primary Assembly 2006 na NODE_21028_length_1688_cov_5.97857_ID_42403 unplaced-scaffold na na MDUX01000120.1 = NZ_MDUX01000120.1 Primary Assembly 1688 na NODE_21495_length_1549_cov_61.1506_ID_43333 unplaced-scaffold na na MDUX01000121.1 = NZ_MDUX01000121.1 Primary Assembly 1549 na NODE_21527_length_1542_cov_61.688_ID_43397 unplaced-scaffold na na MDUX01000122.1 = NZ_MDUX01000122.1 Primary Assembly 1541 na