# Assembly name:  IPHC_HiSten_1.0
# Organism name:  Hippoglossus stenolepis (Pacific halibut)
# Isolate:  PH-IPHC-18
# Sex:  female
# Taxid:          195615
# BioSample:      SAMN14503176
# BioProject:     PRJNA622249
# Submitter:      International Pacific Halibut Commission
# Date:           2020-06-16
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JABBIT01
# Assembly method: WTDBG2 v. 2.3; 3D-DNA v. 1801014
# Expected final version: yes
# Genome coverage: 91.0x
# Sequencing technology: Oxford Nanopore GridION; Oxford Nanopore PromethION; Illumina NovaSeq
# Excluded from RefSeq: superseded by newer assembly for species
# GenBank assembly accession: GCA_013339905.1
# RefSeq assembly accession: GCF_013339905.1
# RefSeq assembly and GenBank assemblies identical: no
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_013339915.1	GCF_013339915.1	Primary Assembly
## 	GCF_013373725.1	non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
HST_1.0_LG1	assembled-molecule	1	Chromosome	CM023496.1	=	NC_048927.1	Primary Assembly	32413155	na
HST_1.0_LG2	assembled-molecule	2	Chromosome	CM023497.1	=	NC_048928.1	Primary Assembly	31084154	na
HST_1.0_LG3	assembled-molecule	3	Chromosome	CM023498.1	=	NC_048929.1	Primary Assembly	30693505	na
HST_1.0_LG4	assembled-molecule	4	Chromosome	CM023499.1	=	NC_048930.1	Primary Assembly	29847143	na
HST_1.0_LG5	assembled-molecule	5	Chromosome	CM023500.1	=	NC_048931.1	Primary Assembly	28544832	na
HST_1.0_LG6	assembled-molecule	6	Chromosome	CM023501.1	=	NC_048932.1	Primary Assembly	28076419	na
HST_1.0_LG7	assembled-molecule	7	Chromosome	CM023502.1	=	NC_048933.1	Primary Assembly	27901191	na
HST_1.0_LG8	assembled-molecule	8	Chromosome	CM023503.1	=	NC_048934.1	Primary Assembly	26980336	na
HST_1.0_LG9	assembled-molecule	9	Chromosome	CM023504.1	=	NC_048935.1	Primary Assembly	26825518	na
HST_1.0_LG10	assembled-molecule	10	Chromosome	CM023505.1	=	NC_048936.1	Primary Assembly	25823689	na
HST_1.0_LG11	assembled-molecule	11	Chromosome	CM023506.1	=	NC_048937.1	Primary Assembly	24985257	na
HST_1.0_LG12	assembled-molecule	12	Chromosome	CM023507.1	=	NC_048938.1	Primary Assembly	24660986	na
HST_1.0_LG13	assembled-molecule	13	Chromosome	CM023508.1	=	NC_048939.1	Primary Assembly	24634736	na
HST_1.0_LG14	assembled-molecule	14	Chromosome	CM023509.1	=	NC_048940.1	Primary Assembly	24333102	na
HST_1.0_LG15	assembled-molecule	15	Chromosome	CM023510.1	=	NC_048941.1	Primary Assembly	24215957	na
HST_1.0_LG16	assembled-molecule	16	Chromosome	CM023511.1	=	NC_048942.1	Primary Assembly	23007894	na
HST_1.0_LG17	assembled-molecule	17	Chromosome	CM023512.1	=	NC_048943.1	Primary Assembly	22135534	na
HST_1.0_LG18	assembled-molecule	18	Chromosome	CM023513.1	=	NC_048944.1	Primary Assembly	21248000	na
HST_1.0_LG19	assembled-molecule	19	Chromosome	CM023514.1	=	NC_048945.1	Primary Assembly	21045264	na
HST_1.0_LG20	assembled-molecule	20	Chromosome	CM023515.1	=	NC_048946.1	Primary Assembly	20866687	na
HST_1.0_LG21	assembled-molecule	21	Chromosome	CM023516.1	=	NC_048947.1	Primary Assembly	20395685	na
HST_1.0_LG22	assembled-molecule	22	Chromosome	CM023517.1	=	NC_048948.1	Primary Assembly	18327232	na
HST_1.0_LG23	assembled-molecule	23	Chromosome	CM023518.1	=	NC_048949.1	Primary Assembly	16476449	na
HST_1.0_LG24	assembled-molecule	24	Chromosome	CM023519.1	=	NC_048950.1	Primary Assembly	11318318	na
HST_1.0_unplaced_1	unplaced-scaffold	na	na	JABBIT010000025.1	=	NW_023312360.1	Primary Assembly	4273499	na
HST_1.0_unplaced_2	unplaced-scaffold	na	na	JABBIT010000026.1	=	NW_023312375.1	Primary Assembly	543777	na
HST_1.0_unplaced_3	unplaced-scaffold	na	na	JABBIT010000027.1	=	NW_023312401.1	Primary Assembly	579274	na
HST_1.0_unplaced_4	unplaced-scaffold	na	na	JABBIT010000028.1	=	NW_023312415.1	Primary Assembly	379000	na
HST_1.0_unplaced_6	unplaced-scaffold	na	na	JABBIT010000029.1	=	NW_023312446.1	Primary Assembly	310350	na
HST_1.0_unplaced_9	unplaced-scaffold	na	na	JABBIT010000030.1	=	NW_023312454.1	Primary Assembly	304727	na
HST_1.0_unplaced_13	unplaced-scaffold	na	na	JABBIT010000031.1	=	NW_023312363.1	Primary Assembly	206063	na
HST_1.0_unplaced_17	unplaced-scaffold	na	na	JABBIT010000032.1	=	NW_023312371.1	Primary Assembly	125000	na
HST_1.0_unplaced_18	unplaced-scaffold	na	na	JABBIT010000033.1	=	NW_023312372.1	Primary Assembly	130023	na
HST_1.0_unplaced_19	unplaced-scaffold	na	na	JABBIT010000034.1	=	NW_023312373.1	Primary Assembly	104501	na
HST_1.0_unplaced_24	unplaced-scaffold	na	na	JABBIT010000035.1	=	NW_023312385.1	Primary Assembly	75560	na
HST_1.0_unplaced_26	unplaced-scaffold	na	na	JABBIT010000036.1	=	NW_023312389.1	Primary Assembly	84038	na
HST_1.0_unplaced_29	unplaced-scaffold	na	na	JABBIT010000037.1	=	NW_023312398.1	Primary Assembly	65792	na
HST_1.0_unplaced_34	unplaced-scaffold	na	na	JABBIT010000038.1	=	NW_023312406.1	Primary Assembly	50000	na
HST_1.0_unplaced_39	unplaced-scaffold	na	na	JABBIT010000039.1	=	NW_023312412.1	Primary Assembly	44381	na
HST_1.0_unplaced_45	unplaced-scaffold	na	na	JABBIT010000040.1	=	NW_023312424.1	Primary Assembly	35623	na
HST_1.0_unplaced_49	unplaced-scaffold	na	na	JABBIT010000041.1	=	NW_023312430.1	Primary Assembly	33000	na
HST_1.0_unplaced_52	unplaced-scaffold	na	na	JABBIT010000042.1	=	NW_023312436.1	Primary Assembly	31889	na
HST_1.0_unplaced_53	unplaced-scaffold	na	na	JABBIT010000043.1	=	NW_023312438.1	Primary Assembly	29684	na
HST_1.0_unplaced_54	unplaced-scaffold	na	na	JABBIT010000044.1	=	NW_023312440.1	Primary Assembly	28167	na
HST_1.0_unplaced_56	unplaced-scaffold	na	na	JABBIT010000045.1	=	NW_023312442.1	Primary Assembly	27383	na
HST_1.0_unplaced_63	unplaced-scaffold	na	na	JABBIT010000046.1	=	NW_023312447.1	Primary Assembly	25119	na
HST_1.0_unplaced_64	unplaced-scaffold	na	na	JABBIT010000047.1	=	NW_023312448.1	Primary Assembly	24798	na
HST_1.0_unplaced_70	unplaced-scaffold	na	na	JABBIT010000048.1	=	NW_023312449.1	Primary Assembly	24066	na
HST_1.0_unplaced_73	unplaced-scaffold	na	na	JABBIT010000049.1	=	NW_023312450.1	Primary Assembly	23788	na
HST_1.0_unplaced_78	unplaced-scaffold	na	na	JABBIT010000050.1	=	NW_023312451.1	Primary Assembly	21862	na
HST_1.0_unplaced_81	unplaced-scaffold	na	na	JABBIT010000051.1	=	NW_023312452.1	Primary Assembly	21431	na
HST_1.0_unplaced_86	unplaced-scaffold	na	na	JABBIT010000052.1	=	NW_023312453.1	Primary Assembly	19993	na
HST_1.0_unplaced_103	unplaced-scaffold	na	na	JABBIT010000053.1	=	NW_023312361.1	Primary Assembly	16525	na
HST_1.0_unplaced_116	unplaced-scaffold	na	na	JABBIT010000054.1	=	NW_023312362.1	Primary Assembly	11590	na
HST_1.0_unplaced_136	unplaced-scaffold	na	na	JABBIT010000055.1	=	NW_023312364.1	Primary Assembly	6035	na
HST_1.0_unplaced_138	unplaced-scaffold	na	na	JABBIT010000056.1	=	NW_023312365.1	Primary Assembly	5500	na
HST_1.0_unplaced_144	unplaced-scaffold	na	na	JABBIT010000057.1	=	NW_023312366.1	Primary Assembly	5000	na
HST_1.0_unplaced_146	unplaced-scaffold	na	na	JABBIT010000058.1	=	NW_023312367.1	Primary Assembly	5000	na
HST_1.0_unplaced_147	unplaced-scaffold	na	na	JABBIT010000059.1	=	NW_023312368.1	Primary Assembly	5000	na
HST_1.0_unplaced_148	unplaced-scaffold	na	na	JABBIT010000060.1	=	NW_023312369.1	Primary Assembly	5000	na
HST_1.0_unplaced_149	unplaced-scaffold	na	na	JABBIT010000061.1	=	NW_023312370.1	Primary Assembly	4965	na
HST_1.0_unplaced_194	unplaced-scaffold	na	na	JABBIT010000062.1	=	NW_023312374.1	Primary Assembly	14399	na
HST_1.0_unplaced_207	unplaced-scaffold	na	na	JABBIT010000063.1	=	NW_023312376.1	Primary Assembly	13942	na
HST_1.0_unplaced_211	unplaced-scaffold	na	na	JABBIT010000064.1	=	NW_023312377.1	Primary Assembly	13913	na
HST_1.0_unplaced_212	unplaced-scaffold	na	na	JABBIT010000065.1	=	NW_023312378.1	Primary Assembly	13904	na
HST_1.0_unplaced_215	unplaced-scaffold	na	na	JABBIT010000066.1	=	NW_023312379.1	Primary Assembly	13863	na
HST_1.0_unplaced_223	unplaced-scaffold	na	na	JABBIT010000067.1	=	NW_023312380.1	Primary Assembly	13681	na
HST_1.0_unplaced_227	unplaced-scaffold	na	na	JABBIT010000068.1	=	NW_023312381.1	Primary Assembly	13651	na
HST_1.0_unplaced_231	unplaced-scaffold	na	na	JABBIT010000069.1	=	NW_023312382.1	Primary Assembly	13598	na
HST_1.0_unplaced_232	unplaced-scaffold	na	na	JABBIT010000070.1	=	NW_023312383.1	Primary Assembly	13576	na
HST_1.0_unplaced_234	unplaced-scaffold	na	na	JABBIT010000071.1	=	NW_023312384.1	Primary Assembly	13550	na
HST_1.0_unplaced_242	unplaced-scaffold	na	na	JABBIT010000072.1	=	NW_023312386.1	Primary Assembly	13393	na
HST_1.0_unplaced_248	unplaced-scaffold	na	na	JABBIT010000073.1	=	NW_023312387.1	Primary Assembly	13204	na
HST_1.0_unplaced_259	unplaced-scaffold	na	na	JABBIT010000074.1	=	NW_023312388.1	Primary Assembly	12862	na
HST_1.0_unplaced_260	unplaced-scaffold	na	na	JABBIT010000075.1	=	NW_023312390.1	Primary Assembly	12860	na
HST_1.0_unplaced_270	unplaced-scaffold	na	na	JABBIT010000076.1	=	NW_023312391.1	Primary Assembly	12676	na
HST_1.0_unplaced_271	unplaced-scaffold	na	na	JABBIT010000077.1	=	NW_023312392.1	Primary Assembly	12675	na
HST_1.0_unplaced_274	unplaced-scaffold	na	na	JABBIT010000078.1	=	NW_023312393.1	Primary Assembly	12626	na
HST_1.0_unplaced_279	unplaced-scaffold	na	na	JABBIT010000079.1	=	NW_023312394.1	Primary Assembly	12464	na
HST_1.0_unplaced_285	unplaced-scaffold	na	na	JABBIT010000080.1	=	NW_023312395.1	Primary Assembly	12188	na
HST_1.0_unplaced_287	unplaced-scaffold	na	na	JABBIT010000081.1	=	NW_023312396.1	Primary Assembly	12168	na
HST_1.0_unplaced_288	unplaced-scaffold	na	na	JABBIT010000082.1	=	NW_023312397.1	Primary Assembly	12166	na
HST_1.0_unplaced_290	unplaced-scaffold	na	na	JABBIT010000083.1	=	NW_023312399.1	Primary Assembly	12097	na
HST_1.0_unplaced_291	unplaced-scaffold	na	na	JABBIT010000084.1	=	NW_023312400.1	Primary Assembly	12096	na
HST_1.0_unplaced_317	unplaced-scaffold	na	na	JABBIT010000085.1	=	NW_023312402.1	Primary Assembly	11225	na
HST_1.0_unplaced_318	unplaced-scaffold	na	na	JABBIT010000086.1	=	NW_023312403.1	Primary Assembly	11120	na
HST_1.0_unplaced_326	unplaced-scaffold	na	na	JABBIT010000087.1	=	NW_023312404.1	Primary Assembly	11008	na
HST_1.0_unplaced_336	unplaced-scaffold	na	na	JABBIT010000088.1	=	NW_023312405.1	Primary Assembly	10792	na
HST_1.0_unplaced_344	unplaced-scaffold	na	na	JABBIT010000089.1	=	NW_023312407.1	Primary Assembly	10562	na
HST_1.0_unplaced_359	unplaced-scaffold	na	na	JABBIT010000090.1	=	NW_023312408.1	Primary Assembly	10258	na
HST_1.0_unplaced_360	unplaced-scaffold	na	na	JABBIT010000091.1	=	NW_023312409.1	Primary Assembly	10244	na
HST_1.0_unplaced_376	unplaced-scaffold	na	na	JABBIT010000092.1	=	NW_023312410.1	Primary Assembly	9946	na
HST_1.0_unplaced_385	unplaced-scaffold	na	na	JABBIT010000093.1	=	NW_023312411.1	Primary Assembly	9779	na
HST_1.0_unplaced_390	unplaced-scaffold	na	na	JABBIT010000094.1	=	NW_023312413.1	Primary Assembly	9675	na
HST_1.0_unplaced_391	unplaced-scaffold	na	na	JABBIT010000095.1	=	NW_023312414.1	Primary Assembly	9653	na
HST_1.0_unplaced_400	unplaced-scaffold	na	na	JABBIT010000096.1	=	NW_023312416.1	Primary Assembly	9447	na
HST_1.0_unplaced_405	unplaced-scaffold	na	na	JABBIT010000097.1	=	NW_023312417.1	Primary Assembly	9381	na
HST_1.0_unplaced_409	unplaced-scaffold	na	na	JABBIT010000098.1	=	NW_023312418.1	Primary Assembly	9321	na
HST_1.0_unplaced_419	unplaced-scaffold	na	na	JABBIT010000099.1	=	NW_023312419.1	Primary Assembly	9107	na
HST_1.0_unplaced_426	unplaced-scaffold	na	na	JABBIT010000100.1	=	NW_023312420.1	Primary Assembly	8985	na
HST_1.0_unplaced_433	unplaced-scaffold	na	na	JABBIT010000101.1	=	NW_023312421.1	Primary Assembly	8906	na
HST_1.0_unplaced_443	unplaced-scaffold	na	na	JABBIT010000102.1	=	NW_023312422.1	Primary Assembly	8719	na
HST_1.0_unplaced_445	unplaced-scaffold	na	na	JABBIT010000103.1	=	NW_023312423.1	Primary Assembly	8677	na
HST_1.0_unplaced_457	unplaced-scaffold	na	na	JABBIT010000104.1	=	NW_023312425.1	Primary Assembly	8348	na
HST_1.0_unplaced_458	unplaced-scaffold	na	na	JABBIT010000105.1	=	NW_023312426.1	Primary Assembly	8332	na
HST_1.0_unplaced_461	unplaced-scaffold	na	na	JABBIT010000106.1	=	NW_023312427.1	Primary Assembly	8266	na
HST_1.0_unplaced_473	unplaced-scaffold	na	na	JABBIT010000107.1	=	NW_023312428.1	Primary Assembly	7945	na
HST_1.0_unplaced_485	unplaced-scaffold	na	na	JABBIT010000108.1	=	NW_023312429.1	Primary Assembly	7514	na
HST_1.0_unplaced_493	unplaced-scaffold	na	na	JABBIT010000109.1	=	NW_023312431.1	Primary Assembly	7246	na
HST_1.0_unplaced_494	unplaced-scaffold	na	na	JABBIT010000110.1	=	NW_023312432.1	Primary Assembly	7229	na
HST_1.0_unplaced_508	unplaced-scaffold	na	na	JABBIT010000111.1	=	NW_023312433.1	Primary Assembly	6905	na
HST_1.0_unplaced_512	unplaced-scaffold	na	na	JABBIT010000112.1	=	NW_023312434.1	Primary Assembly	6852	na
HST_1.0_unplaced_517	unplaced-scaffold	na	na	JABBIT010000113.1	=	NW_023312435.1	Primary Assembly	6792	na
HST_1.0_unplaced_522	unplaced-scaffold	na	na	JABBIT010000114.1	=	NW_023312437.1	Primary Assembly	6595	na
HST_1.0_unplaced_530	unplaced-scaffold	na	na	JABBIT010000115.1	=	NW_023312439.1	Primary Assembly	6361	na
HST_1.0_unplaced_545	unplaced-scaffold	na	na	JABBIT010000116.1	=	NW_023312441.1	Primary Assembly	5979	na
HST_1.0_unplaced_566	unplaced-scaffold	na	na	JABBIT010000117.1	=	NW_023312443.1	Primary Assembly	5622	na
HST_1.0_unplaced_579	unplaced-scaffold	na	na	JABBIT010000118.1	=	NW_023312444.1	Primary Assembly	5299	na
HST_1.0_unplaced_580	unplaced-scaffold	na	na	JABBIT010000119.1	=	NW_023312445.1	Primary Assembly	5271	na
MT	assembled-molecule	MT	Mitochondrion	na	<>	NC_009710.1	non-nuclear	17841	na