# Assembly name: bTauEry1.pri # Organism name: Tauraco erythrolophus (red-crested turaco) # Isolate: bTauEry1 # Sex: female # Taxid: 121530 # BioSample: SAMN12621036 # BioProject: PRJNA561947 # Submitter: Vertebrate Genomes Project # Date: 2019-12-19 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: WOXW01 # Assembly method: FALCON v. DNANexus 1.9.0; FALCON-Unzip v. DNANexus 1.0.6; purge_haplotigs v. v1.0.3+ 1.Nov.2018; scaff10x v. 4.1.0; Bionano Solve DLS v. 3.2.1; Salsa HiC v. 2.2; Arrow smrtanalysis Pacbio polishing & gap filling v. 6.0.0.47841; longranger align v. 2.2.2; freebayes Illumina polishing v. 1.3.1; gEVAL manual curation v. 2019-08-13; VGP assembly pipeline individual v. 1.5 # Expected final version: No # Genome coverage: 65.99x # Sequencing technology: PacBio Sequel I CLR; Illumina NovaSeq; Arima Genomics Hi-C; Bionano Genomics DLS # RefSeq category: Reference Genome # GenBank assembly accession: GCA_009769465.1 # RefSeq assembly accession: GCF_009769465.1 # RefSeq assembly and GenBank assemblies identical: yes # Linked assembly: GCA_009764505.1 (alternate pseudohaplotype of diploid) # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name scaffold_1_arrow_ctg1 assembled-molecule 1 Chromosome CM019966.1 = NC_141465.1 Primary Assembly 136888462 na scaffold_2_arrow_ctg1 assembled-molecule 2 Chromosome CM019967.1 = NC_141466.1 Primary Assembly 133258647 na scaffold_3_arrow_ctg1 assembled-molecule 3 Chromosome CM019968.1 = NC_141467.1 Primary Assembly 105529604 na super_scaffold_4 assembled-molecule 4 Chromosome CM019969.1 = NC_141468.1 Primary Assembly 88466996 na scaffold_5_arrow_ctg1 assembled-molecule 5 Chromosome CM019970.1 = NC_141469.1 Primary Assembly 85562082 na scaffold_6_arrow_ctg1 assembled-molecule 6 Chromosome CM019971.1 = NC_141470.1 Primary Assembly 74184283 na super_scaffold_7 assembled-molecule 7 Chromosome CM019972.1 = NC_141471.1 Primary Assembly 65626455 na scaffold_9_arrow_ctg1 assembled-molecule 8 Chromosome CM019973.1 = NC_141472.1 Primary Assembly 45285844 na scaffold_10_arrow_ctg1 assembled-molecule 9 Chromosome CM019974.1 = NC_141473.1 Primary Assembly 41925916 na scaffold_11_arrow_ctg1 assembled-molecule 10 Chromosome CM019975.1 = NC_141474.1 Primary Assembly 36177909 na scaffold_12_arrow_ctg1 assembled-molecule 11 Chromosome CM019976.1 = NC_141475.1 Primary Assembly 30408451 na scaffold_13_arrow_ctg1 assembled-molecule 12 Chromosome CM019977.1 = NC_141476.1 Primary Assembly 24572459 na scaffold_14_arrow_ctg1 assembled-molecule 13 Chromosome CM019978.1 = NC_141477.1 Primary Assembly 24080267 na scaffold_15_arrow_ctg1 assembled-molecule 14 Chromosome CM019979.1 = NC_141478.1 Primary Assembly 23987355 na scaffold_16_arrow_ctg1 assembled-molecule 15 Chromosome CM019980.1 = NC_141479.1 Primary Assembly 23248778 na scaffold_18_arrow_ctg1 assembled-molecule 16 Chromosome CM019981.1 = NC_141480.1 Primary Assembly 21861376 na scaffold_19_arrow_ctg1 assembled-molecule 17 Chromosome CM019982.1 = NC_141481.1 Primary Assembly 19046205 na scaffold_20_arrow_ctg1 assembled-molecule 18 Chromosome CM019983.1 = NC_141482.1 Primary Assembly 17982552 na scaffold_21_arrow_ctg1 assembled-molecule 19 Chromosome CM019984.1 = NC_141483.1 Primary Assembly 16551252 na scaffold_22_arrow_ctg1 assembled-molecule 20 Chromosome CM019985.1 = NC_141484.1 Primary Assembly 14239515 na scaffold_23_arrow_ctg1 assembled-molecule 21 Chromosome CM019986.1 = NC_141485.1 Primary Assembly 12889117 na scaffold_24_arrow_ctg1 assembled-molecule 22 Chromosome CM019987.1 = NC_141486.1 Primary Assembly 12777345 na scaffold_27_arrow_ctg1 assembled-molecule 23 Chromosome CM019988.1 = NC_141487.1 Primary Assembly 9263416 na scaffold_28_arrow_ctg1 assembled-molecule 24 Chromosome CM019989.1 = NC_141488.1 Primary Assembly 8797664 na scaffold_29_arrow_ctg1 assembled-molecule 25 Chromosome CM019990.1 = NC_141489.1 Primary Assembly 8488906 na scaffold_30_arrow_ctg1 assembled-molecule 26 Chromosome CM019991.1 = NC_141490.1 Primary Assembly 7911310 na scaffold_31_arrow_ctg1 assembled-molecule 27 Chromosome CM019992.1 = NC_141491.1 Primary Assembly 6998155 na scaffold_33_arrow_ctg1 assembled-molecule 28 Chromosome CM019993.1 = NC_141492.1 Primary Assembly 6393152 na scaffold_34_arrow_ctg1 assembled-molecule 29 Chromosome CM019994.1 = NC_141493.1 Primary Assembly 6144039 na scaffold_39_arrow_ctg1 assembled-molecule 30 Chromosome CM019995.1 = NC_141494.1 Primary Assembly 1810204 na scaffold_41_arrow_ctg1 assembled-molecule 31 Chromosome CM019996.1 = NC_141495.1 Primary Assembly 1572774 na super_scaffold_8 assembled-molecule Z Chromosome CM019997.1 = NC_141496.1 Primary Assembly 93020717 na super_scaffold_25 assembled-molecule W Chromosome CM019998.1 = NC_141497.1 Primary Assembly 29633611 na scaffold_49_arrow_ctg1 unlocalized-scaffold 27 Chromosome WOXW01000085.1 = NW_028238560.1 Primary Assembly 732841 na scaffold_44_arrow_ctg1 unlocalized-scaffold 30 Chromosome WOXW01000081.1 = NW_028238561.1 Primary Assembly 1110723 na scaffold_100_arrow_ctg1 unplaced-scaffold na na WOXW01000001.1 = NW_028238562.1 Primary Assembly 53619 na scaffold_101_arrow_ctg1 unplaced-scaffold na na WOXW01000002.1 = NW_028238563.1 Primary Assembly 53399 na scaffold_102_arrow_ctg1 unplaced-scaffold na na WOXW01000003.1 = NW_028238564.1 Primary Assembly 52375 na scaffold_103_arrow_ctg1 unplaced-scaffold na na WOXW01000004.1 = NW_028238565.1 Primary Assembly 48607 na scaffold_104_arrow_ctg1 unplaced-scaffold na na WOXW01000005.1 = NW_028238566.1 Primary Assembly 48224 na scaffold_105_arrow_ctg1 unplaced-scaffold na na WOXW01000006.1 = NW_028238567.1 Primary Assembly 47906 na scaffold_106_arrow_ctg1 unplaced-scaffold na na WOXW01000007.1 = NW_028238568.1 Primary Assembly 45972 na scaffold_107_arrow_ctg1 unplaced-scaffold na na WOXW01000008.1 = NW_028238569.1 Primary Assembly 45734 na scaffold_108_arrow_ctg1 unplaced-scaffold na na WOXW01000009.1 = NW_028238570.1 Primary Assembly 44704 na scaffold_109_arrow_ctg1 unplaced-scaffold na na WOXW01000010.1 = NW_028238571.1 Primary Assembly 44443 na scaffold_110_arrow_ctg1 unplaced-scaffold na na WOXW01000012.1 = NW_028238572.1 Primary Assembly 42559 na scaffold_111_arrow_ctg1 unplaced-scaffold na na WOXW01000013.1 = NW_028238573.1 Primary Assembly 42379 na scaffold_112_arrow_ctg1 unplaced-scaffold na na WOXW01000014.1 = NW_028238574.1 Primary Assembly 42013 na scaffold_113_arrow_ctg1 unplaced-scaffold na na WOXW01000015.1 = NW_028238575.1 Primary Assembly 41366 na scaffold_114_arrow_ctg1 unplaced-scaffold na na WOXW01000016.1 = NW_028238576.1 Primary Assembly 40797 na scaffold_115_arrow_ctg1 unplaced-scaffold na na WOXW01000017.1 = NW_028238577.1 Primary Assembly 40383 na scaffold_116_arrow_ctg1 unplaced-scaffold na na WOXW01000018.1 = NW_028238578.1 Primary Assembly 40131 na scaffold_117_arrow_ctg1 unplaced-scaffold na na WOXW01000019.1 = NW_028238579.1 Primary Assembly 38822 na scaffold_118_arrow_ctg1 unplaced-scaffold na na WOXW01000020.1 = NW_028238580.1 Primary Assembly 38751 na scaffold_119_arrow_ctg1 unplaced-scaffold na na WOXW01000021.1 = NW_028238581.1 Primary Assembly 37620 na scaffold_120_arrow_ctg1 unplaced-scaffold na na WOXW01000023.1 = NW_028238582.1 Primary Assembly 36615 na scaffold_121_arrow_ctg1 unplaced-scaffold na na WOXW01000024.1 = NW_028238583.1 Primary Assembly 36432 na scaffold_122_arrow_ctg1 unplaced-scaffold na na WOXW01000025.1 = NW_028238584.1 Primary Assembly 34666 na scaffold_123_arrow_ctg1 unplaced-scaffold na na WOXW01000026.1 = NW_028238585.1 Primary Assembly 34318 na scaffold_124_arrow_ctg1 unplaced-scaffold na na WOXW01000027.1 = NW_028238586.1 Primary Assembly 34002 na scaffold_125_arrow_ctg1 unplaced-scaffold na na WOXW01000028.1 = NW_028238587.1 Primary Assembly 33123 na scaffold_126_arrow_ctg1 unplaced-scaffold na na WOXW01000029.1 = NW_028238588.1 Primary Assembly 32814 na scaffold_127_arrow_ctg1 unplaced-scaffold na na WOXW01000030.1 = NW_028238589.1 Primary Assembly 32593 na scaffold_128_arrow_ctg1 unplaced-scaffold na na WOXW01000031.1 = NW_028238590.1 Primary Assembly 32676 na scaffold_129_arrow_ctg1 unplaced-scaffold na na WOXW01000032.1 = NW_028238591.1 Primary Assembly 31701 na scaffold_130_arrow_ctg1 unplaced-scaffold na na WOXW01000034.1 = NW_028238592.1 Primary Assembly 31455 na scaffold_131_arrow_ctg1 unplaced-scaffold na na WOXW01000035.1 = NW_028238593.1 Primary Assembly 30498 na scaffold_132_arrow_ctg1 unplaced-scaffold na na WOXW01000036.1 = NW_028238594.1 Primary Assembly 30320 na scaffold_133_arrow_ctg1 unplaced-scaffold na na WOXW01000037.1 = NW_028238595.1 Primary Assembly 26692 na scaffold_134_arrow_ctg1 unplaced-scaffold na na WOXW01000038.1 = NW_028238596.1 Primary Assembly 26217 na scaffold_135_arrow_ctg1 unplaced-scaffold na na WOXW01000039.1 = NW_028238597.1 Primary Assembly 25890 na scaffold_136_arrow_ctg1 unplaced-scaffold na na WOXW01000040.1 = NW_028238598.1 Primary Assembly 25563 na scaffold_137_arrow_ctg1 unplaced-scaffold na na WOXW01000041.1 = NW_028238599.1 Primary Assembly 23861 na scaffold_138_arrow_ctg1 unplaced-scaffold na na WOXW01000042.1 = NW_028238600.1 Primary Assembly 23299 na scaffold_139_arrow_ctg1 unplaced-scaffold na na WOXW01000043.1 = NW_028238601.1 Primary Assembly 23080 na scaffold_140_arrow_ctg1 unplaced-scaffold na na WOXW01000045.1 = NW_028238602.1 Primary Assembly 22938 na scaffold_141_arrow_ctg1 unplaced-scaffold na na WOXW01000046.1 = NW_028238603.1 Primary Assembly 22180 na scaffold_142_arrow_ctg1 unplaced-scaffold na na WOXW01000047.1 = NW_028238604.1 Primary Assembly 22182 na scaffold_143_arrow_ctg1 unplaced-scaffold na na WOXW01000048.1 = NW_028238605.1 Primary Assembly 21889 na scaffold_144_arrow_ctg1 unplaced-scaffold na na WOXW01000049.1 = NW_028238606.1 Primary Assembly 20981 na scaffold_145_arrow_ctg1 unplaced-scaffold na na WOXW01000050.1 = NW_028238607.1 Primary Assembly 20482 na scaffold_146_arrow_ctg1 unplaced-scaffold na na WOXW01000051.1 = NW_028238608.1 Primary Assembly 16155 na scaffold_147_arrow_ctg1 unplaced-scaffold na na WOXW01000052.1 = NW_028238609.1 Primary Assembly 15908 na scaffold_148_arrow_ctg1 unplaced-scaffold na na WOXW01000053.1 = NW_028238610.1 Primary Assembly 11084 na scaffold_149_arrow_ctg1 unplaced-scaffold na na WOXW01000054.1 = NW_028238611.1 Primary Assembly 3707 na scaffold_150_arrow_ctg1 unplaced-scaffold na na WOXW01000056.1 = NW_028238612.1 Primary Assembly 3169 na scaffold_37_arrow_ctg1 unplaced-scaffold na na WOXW01000076.1 = NW_028238613.1 Primary Assembly 1556041 na scaffold_40_arrow_ctg1 unplaced-scaffold na na WOXW01000079.1 = NW_028238614.1 Primary Assembly 1333501 na scaffold_45_arrow_ctg1 unplaced-scaffold na na WOXW01000082.1 = NW_028238615.1 Primary Assembly 941583 na scaffold_47_arrow_ctg1 unplaced-scaffold na na WOXW01000083.1 = NW_028238616.1 Primary Assembly 891707 na scaffold_48_arrow_ctg1 unplaced-scaffold na na WOXW01000084.1 = NW_028238617.1 Primary Assembly 805040 na scaffold_50_arrow_ctg1 unplaced-scaffold na na WOXW01000087.1 = NW_028238618.1 Primary Assembly 550902 na scaffold_51_arrow_ctg1 unplaced-scaffold na na WOXW01000088.1 = NW_028238619.1 Primary Assembly 527575 na scaffold_52_arrow_ctg1 unplaced-scaffold na na WOXW01000089.1 = NW_028238620.1 Primary Assembly 480900 na scaffold_53_arrow_ctg1 unplaced-scaffold na na WOXW01000090.1 = NW_028238621.1 Primary Assembly 377823 na scaffold_54_arrow_ctg1 unplaced-scaffold na na WOXW01000091.1 = NW_028238622.1 Primary Assembly 442529 na scaffold_55_arrow_ctg1 unplaced-scaffold na na WOXW01000092.1 = NW_028238623.1 Primary Assembly 439566 na scaffold_56_arrow_ctg1 unplaced-scaffold na na WOXW01000093.1 = NW_028238624.1 Primary Assembly 436407 na scaffold_57_arrow_ctg1 unplaced-scaffold na na WOXW01000094.1 = NW_028238625.1 Primary Assembly 113951 na scaffold_58_arrow_ctg1 unplaced-scaffold na na WOXW01000095.1 = NW_028238626.1 Primary Assembly 397614 na scaffold_59_arrow_ctg1 unplaced-scaffold na na WOXW01000096.1 = NW_028238627.1 Primary Assembly 388180 na scaffold_60_arrow_ctg1 unplaced-scaffold na na WOXW01000098.1 = NW_028238628.1 Primary Assembly 368932 na scaffold_61_arrow_ctg1 unplaced-scaffold na na WOXW01000099.1 = NW_028238629.1 Primary Assembly 332024 na scaffold_62_arrow_ctg1 unplaced-scaffold na na WOXW01000100.1 = NW_028238630.1 Primary Assembly 287180 na scaffold_63_arrow_ctg1 unplaced-scaffold na na WOXW01000101.1 = NW_028238631.1 Primary Assembly 219496 na scaffold_64_arrow_ctg1 unplaced-scaffold na na WOXW01000102.1 = NW_028238632.1 Primary Assembly 213352 na scaffold_65_arrow_ctg1 unplaced-scaffold na na WOXW01000103.1 = NW_028238633.1 Primary Assembly 161106 na scaffold_66_arrow_ctg1 unplaced-scaffold na na WOXW01000104.1 = NW_028238634.1 Primary Assembly 149487 na scaffold_68_arrow_ctg1 unplaced-scaffold na na WOXW01000105.1 = NW_028238635.1 Primary Assembly 132134 na scaffold_69_arrow_ctg1 unplaced-scaffold na na WOXW01000106.1 = NW_028238636.1 Primary Assembly 129637 na scaffold_70_arrow_ctg1 unplaced-scaffold na na WOXW01000108.1 = NW_028238637.1 Primary Assembly 124113 na scaffold_71_arrow_ctg1 unplaced-scaffold na na WOXW01000109.1 = NW_028238638.1 Primary Assembly 114590 na scaffold_72_arrow_ctg1 unplaced-scaffold na na WOXW01000110.1 = NW_028238639.1 Primary Assembly 112589 na scaffold_73_arrow_ctg1 unplaced-scaffold na na WOXW01000111.1 = NW_028238640.1 Primary Assembly 111458 na scaffold_74_arrow_ctg1 unplaced-scaffold na na WOXW01000112.1 = NW_028238641.1 Primary Assembly 107250 na scaffold_75_arrow_ctg1 unplaced-scaffold na na WOXW01000113.1 = NW_028238642.1 Primary Assembly 102264 na scaffold_76_arrow_ctg1 unplaced-scaffold na na WOXW01000114.1 = NW_028238643.1 Primary Assembly 101721 na scaffold_77_arrow_ctg1 unplaced-scaffold na na WOXW01000115.1 = NW_028238644.1 Primary Assembly 100313 na scaffold_78_arrow_ctg1 unplaced-scaffold na na WOXW01000116.1 = NW_028238645.1 Primary Assembly 100495 na scaffold_79_arrow_ctg1 unplaced-scaffold na na WOXW01000117.1 = NW_028238646.1 Primary Assembly 98479 na scaffold_80_arrow_ctg1 unplaced-scaffold na na WOXW01000119.1 = NW_028238647.1 Primary Assembly 94139 na scaffold_81_arrow_ctg1 unplaced-scaffold na na WOXW01000120.1 = NW_028238648.1 Primary Assembly 91940 na scaffold_82_arrow_ctg1 unplaced-scaffold na na WOXW01000121.1 = NW_028238649.1 Primary Assembly 91363 na scaffold_83_arrow_ctg1 unplaced-scaffold na na WOXW01000122.1 = NW_028238650.1 Primary Assembly 85105 na scaffold_84_arrow_ctg1 unplaced-scaffold na na WOXW01000123.1 = NW_028238651.1 Primary Assembly 84493 na scaffold_85_arrow_ctg1 unplaced-scaffold na na WOXW01000124.1 = NW_028238652.1 Primary Assembly 83376 na scaffold_86_arrow_ctg1 unplaced-scaffold na na WOXW01000125.1 = NW_028238653.1 Primary Assembly 75354 na scaffold_87_arrow_ctg1 unplaced-scaffold na na WOXW01000126.1 = NW_028238654.1 Primary Assembly 71184 na scaffold_88_arrow_ctg1 unplaced-scaffold na na WOXW01000127.1 = NW_028238655.1 Primary Assembly 71082 na scaffold_89_arrow_ctg1 unplaced-scaffold na na WOXW01000128.1 = NW_028238656.1 Primary Assembly 70691 na scaffold_90_arrow_ctg1 unplaced-scaffold na na WOXW01000130.1 = NW_028238657.1 Primary Assembly 69215 na scaffold_91_arrow_ctg1 unplaced-scaffold na na WOXW01000131.1 = NW_028238658.1 Primary Assembly 67083 na scaffold_92_arrow_ctg1 unplaced-scaffold na na WOXW01000132.1 = NW_028238659.1 Primary Assembly 65708 na scaffold_93_arrow_ctg1 unplaced-scaffold na na WOXW01000133.1 = NW_028238660.1 Primary Assembly 60353 na scaffold_94_arrow_ctg1 unplaced-scaffold na na WOXW01000134.1 = NW_028238661.1 Primary Assembly 57808 na scaffold_95_arrow_ctg1 unplaced-scaffold na na WOXW01000135.1 = NW_028238662.1 Primary Assembly 57539 na scaffold_96_arrow_ctg1 unplaced-scaffold na na WOXW01000136.1 = NW_028238663.1 Primary Assembly 55931 na scaffold_97_arrow_ctg1 unplaced-scaffold na na WOXW01000137.1 = NW_028238664.1 Primary Assembly 55424 na scaffold_98_arrow_ctg1 unplaced-scaffold na na WOXW01000138.1 = NW_028238665.1 Primary Assembly 54846 na scaffold_99_arrow_ctg1 unplaced-scaffold na na WOXW01000139.1 = NW_028238666.1 Primary Assembly 54304 na