# Assembly name: ASM969607v1 # Organism name: Holdemanella porci (firmicutes) # Infraspecific name: strain=LKV-472-APC-3 # Taxid: 2652276 # BioSample: SAMN12619143 # BioProject: PRJNA561470 # Submitter: UniKlinik RWTH Aachen # Date: 2019-11-22 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: VUMR01 # Assembly method: SPAdes v. V3.6.1 # Expected final version: yes # Genome coverage: 740x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_009696075.1 # RefSeq assembly accession: GCF_009696075.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_009696085.1 GCF_009696085.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name seq1 unplaced-scaffold na na VUMR01000001.1 = NZ_VUMR01000001.1 Primary Assembly 100180 na seq2 unplaced-scaffold na na VUMR01000002.1 = NZ_VUMR01000002.1 Primary Assembly 99904 na seq3 unplaced-scaffold na na VUMR01000003.1 = NZ_VUMR01000003.1 Primary Assembly 91470 na seq4 unplaced-scaffold na na VUMR01000004.1 = NZ_VUMR01000004.1 Primary Assembly 66747 na seq5 unplaced-scaffold na na VUMR01000005.1 = NZ_VUMR01000005.1 Primary Assembly 55622 na seq6 unplaced-scaffold na na VUMR01000006.1 = NZ_VUMR01000006.1 Primary Assembly 53348 na seq7 unplaced-scaffold na na VUMR01000007.1 = NZ_VUMR01000007.1 Primary Assembly 52177 na seq8 unplaced-scaffold na na VUMR01000008.1 = NZ_VUMR01000008.1 Primary Assembly 52067 na seq9 unplaced-scaffold na na VUMR01000009.1 = NZ_VUMR01000009.1 Primary Assembly 50466 na seq10 unplaced-scaffold na na VUMR01000010.1 = NZ_VUMR01000010.1 Primary Assembly 48100 na seq11 unplaced-scaffold na na VUMR01000011.1 = NZ_VUMR01000011.1 Primary Assembly 43951 na seq12 unplaced-scaffold na na VUMR01000012.1 = NZ_VUMR01000012.1 Primary Assembly 40114 na seq13 unplaced-scaffold na na VUMR01000013.1 = NZ_VUMR01000013.1 Primary Assembly 34142 na seq14 unplaced-scaffold na na VUMR01000014.1 = NZ_VUMR01000014.1 Primary Assembly 32899 na seq15 unplaced-scaffold na na VUMR01000015.1 = NZ_VUMR01000015.1 Primary Assembly 32558 na seq16 unplaced-scaffold na na VUMR01000016.1 = NZ_VUMR01000016.1 Primary Assembly 30374 na seq17 unplaced-scaffold na na VUMR01000017.1 = NZ_VUMR01000017.1 Primary Assembly 29846 na seq18 unplaced-scaffold na na VUMR01000018.1 = NZ_VUMR01000018.1 Primary Assembly 29574 na seq19 unplaced-scaffold na na VUMR01000019.1 = NZ_VUMR01000019.1 Primary Assembly 27992 na seq20 unplaced-scaffold na na VUMR01000020.1 = NZ_VUMR01000020.1 Primary Assembly 27222 na seq21 unplaced-scaffold na na VUMR01000021.1 = NZ_VUMR01000021.1 Primary Assembly 26892 na seq22 unplaced-scaffold na na VUMR01000022.1 = NZ_VUMR01000022.1 Primary Assembly 26381 na seq23 unplaced-scaffold na na VUMR01000023.1 = NZ_VUMR01000023.1 Primary Assembly 26213 na seq24 unplaced-scaffold na na VUMR01000024.1 = NZ_VUMR01000024.1 Primary Assembly 26210 na seq25 unplaced-scaffold na na VUMR01000025.1 = NZ_VUMR01000025.1 Primary Assembly 26115 na seq26 unplaced-scaffold na na VUMR01000026.1 = NZ_VUMR01000026.1 Primary Assembly 25282 na seq27 unplaced-scaffold na na VUMR01000027.1 = NZ_VUMR01000027.1 Primary Assembly 24898 na seq28 unplaced-scaffold na na VUMR01000028.1 = NZ_VUMR01000028.1 Primary Assembly 23927 na seq29 unplaced-scaffold na na VUMR01000029.1 = NZ_VUMR01000029.1 Primary Assembly 23723 na seq30 unplaced-scaffold na na VUMR01000030.1 = NZ_VUMR01000030.1 Primary Assembly 22721 na seq31 unplaced-scaffold na na VUMR01000031.1 = NZ_VUMR01000031.1 Primary Assembly 21818 na seq32 unplaced-scaffold na na VUMR01000032.1 = NZ_VUMR01000032.1 Primary Assembly 21735 na seq33 unplaced-scaffold na na VUMR01000033.1 = NZ_VUMR01000033.1 Primary Assembly 20815 na seq34 unplaced-scaffold na na VUMR01000034.1 = NZ_VUMR01000034.1 Primary Assembly 20723 na seq35 unplaced-scaffold na na VUMR01000035.1 = NZ_VUMR01000035.1 Primary Assembly 20113 na seq36 unplaced-scaffold na na VUMR01000036.1 = NZ_VUMR01000036.1 Primary Assembly 19848 na seq37 unplaced-scaffold na na VUMR01000037.1 = NZ_VUMR01000037.1 Primary Assembly 19846 na seq38 unplaced-scaffold na na VUMR01000038.1 = NZ_VUMR01000038.1 Primary Assembly 19556 na seq39 unplaced-scaffold na na VUMR01000039.1 = NZ_VUMR01000039.1 Primary Assembly 19411 na seq40 unplaced-scaffold na na VUMR01000040.1 = NZ_VUMR01000040.1 Primary Assembly 19243 na seq41 unplaced-scaffold na na VUMR01000041.1 = NZ_VUMR01000041.1 Primary Assembly 18611 na seq42 unplaced-scaffold na na VUMR01000042.1 = NZ_VUMR01000042.1 Primary Assembly 18422 na seq43 unplaced-scaffold na na VUMR01000043.1 = NZ_VUMR01000043.1 Primary Assembly 17994 na seq44 unplaced-scaffold na na VUMR01000044.1 = NZ_VUMR01000044.1 Primary Assembly 17850 na seq45 unplaced-scaffold na na VUMR01000045.1 = NZ_VUMR01000045.1 Primary Assembly 16528 na seq46 unplaced-scaffold na na VUMR01000046.1 = NZ_VUMR01000046.1 Primary Assembly 16064 na seq47 unplaced-scaffold na na VUMR01000047.1 = NZ_VUMR01000047.1 Primary Assembly 15916 na seq48 unplaced-scaffold na na VUMR01000048.1 = NZ_VUMR01000048.1 Primary Assembly 15809 na seq49 unplaced-scaffold na na VUMR01000049.1 = NZ_VUMR01000049.1 Primary Assembly 15529 na seq50 unplaced-scaffold na na VUMR01000050.1 = NZ_VUMR01000050.1 Primary Assembly 15447 na seq51 unplaced-scaffold na na VUMR01000051.1 = NZ_VUMR01000051.1 Primary Assembly 15303 na seq52 unplaced-scaffold na na VUMR01000052.1 = NZ_VUMR01000052.1 Primary Assembly 15095 na seq53 unplaced-scaffold na na VUMR01000053.1 = NZ_VUMR01000053.1 Primary Assembly 14924 na seq54 unplaced-scaffold na na VUMR01000054.1 = NZ_VUMR01000054.1 Primary Assembly 14688 na seq55 unplaced-scaffold na na VUMR01000055.1 = NZ_VUMR01000055.1 Primary Assembly 14344 na seq56 unplaced-scaffold na na VUMR01000056.1 = NZ_VUMR01000056.1 Primary Assembly 14290 na seq57 unplaced-scaffold na na VUMR01000057.1 = NZ_VUMR01000057.1 Primary Assembly 13747 na seq58 unplaced-scaffold na na VUMR01000058.1 = NZ_VUMR01000058.1 Primary Assembly 13521 na seq59 unplaced-scaffold na na VUMR01000059.1 = NZ_VUMR01000059.1 Primary Assembly 13038 na seq60 unplaced-scaffold na na VUMR01000060.1 = NZ_VUMR01000060.1 Primary Assembly 12584 na seq61 unplaced-scaffold na na VUMR01000061.1 = NZ_VUMR01000061.1 Primary Assembly 11368 na seq62 unplaced-scaffold na na VUMR01000062.1 = NZ_VUMR01000062.1 Primary Assembly 11329 na seq63 unplaced-scaffold na na VUMR01000063.1 = NZ_VUMR01000063.1 Primary Assembly 10882 na seq64 unplaced-scaffold na na VUMR01000064.1 = NZ_VUMR01000064.1 Primary Assembly 10527 na seq65 unplaced-scaffold na na VUMR01000065.1 = NZ_VUMR01000065.1 Primary Assembly 10416 na seq66 unplaced-scaffold na na VUMR01000066.1 = NZ_VUMR01000066.1 Primary Assembly 9806 na seq67 unplaced-scaffold na na VUMR01000067.1 = NZ_VUMR01000067.1 Primary Assembly 9588 na seq68 unplaced-scaffold na na VUMR01000068.1 = NZ_VUMR01000068.1 Primary Assembly 9519 na seq69 unplaced-scaffold na na VUMR01000069.1 = NZ_VUMR01000069.1 Primary Assembly 9511 na seq70 unplaced-scaffold na na VUMR01000070.1 = NZ_VUMR01000070.1 Primary Assembly 9421 na seq71 unplaced-scaffold na na VUMR01000071.1 = NZ_VUMR01000071.1 Primary Assembly 9053 na seq72 unplaced-scaffold na na VUMR01000072.1 = NZ_VUMR01000072.1 Primary Assembly 8587 na seq73 unplaced-scaffold na na VUMR01000073.1 = NZ_VUMR01000073.1 Primary Assembly 8104 na seq74 unplaced-scaffold na na VUMR01000074.1 = NZ_VUMR01000074.1 Primary Assembly 8043 na seq75 unplaced-scaffold na na VUMR01000075.1 = NZ_VUMR01000075.1 Primary Assembly 7784 na seq76 unplaced-scaffold na na VUMR01000076.1 = NZ_VUMR01000076.1 Primary Assembly 7405 na seq77 unplaced-scaffold na na VUMR01000077.1 = NZ_VUMR01000077.1 Primary Assembly 7227 na seq78 unplaced-scaffold na na VUMR01000078.1 = NZ_VUMR01000078.1 Primary Assembly 7119 na seq79 unplaced-scaffold na na VUMR01000079.1 = NZ_VUMR01000079.1 Primary Assembly 6627 na seq80 unplaced-scaffold na na VUMR01000080.1 = NZ_VUMR01000080.1 Primary Assembly 6324 na seq81 unplaced-scaffold na na VUMR01000081.1 = NZ_VUMR01000081.1 Primary Assembly 5321 na seq82 unplaced-scaffold na na VUMR01000082.1 = NZ_VUMR01000082.1 Primary Assembly 4614 na seq83 unplaced-scaffold na na VUMR01000083.1 = NZ_VUMR01000083.1 Primary Assembly 4489 na seq84 unplaced-scaffold na na VUMR01000084.1 = NZ_VUMR01000084.1 Primary Assembly 4484 na seq85 unplaced-scaffold na na VUMR01000085.1 = NZ_VUMR01000085.1 Primary Assembly 4467 na seq86 unplaced-scaffold na na VUMR01000086.1 = NZ_VUMR01000086.1 Primary Assembly 4364 na seq87 unplaced-scaffold na na VUMR01000087.1 = NZ_VUMR01000087.1 Primary Assembly 4325 na seq88 unplaced-scaffold na na VUMR01000088.1 = NZ_VUMR01000088.1 Primary Assembly 3966 na seq89 unplaced-scaffold na na VUMR01000089.1 = NZ_VUMR01000089.1 Primary Assembly 3844 na seq90 unplaced-scaffold na na VUMR01000090.1 = NZ_VUMR01000090.1 Primary Assembly 3702 na seq91 unplaced-scaffold na na VUMR01000091.1 = NZ_VUMR01000091.1 Primary Assembly 3299 na seq92 unplaced-scaffold na na VUMR01000092.1 = NZ_VUMR01000092.1 Primary Assembly 3299 na seq93 unplaced-scaffold na na VUMR01000093.1 = NZ_VUMR01000093.1 Primary Assembly 3193 na seq94 unplaced-scaffold na na VUMR01000094.1 = NZ_VUMR01000094.1 Primary Assembly 3138 na seq95 unplaced-scaffold na na VUMR01000095.1 = NZ_VUMR01000095.1 Primary Assembly 3133 na seq96 unplaced-scaffold na na VUMR01000096.1 = NZ_VUMR01000096.1 Primary Assembly 2978 na seq97 unplaced-scaffold na na VUMR01000097.1 = NZ_VUMR01000097.1 Primary Assembly 2869 na seq98 unplaced-scaffold na na VUMR01000098.1 = NZ_VUMR01000098.1 Primary Assembly 2824 na seq99 unplaced-scaffold na na VUMR01000099.1 = NZ_VUMR01000099.1 Primary Assembly 2689 na seq100 unplaced-scaffold na na VUMR01000100.1 = NZ_VUMR01000100.1 Primary Assembly 2689 na seq101 unplaced-scaffold na na VUMR01000101.1 = NZ_VUMR01000101.1 Primary Assembly 2599 na seq102 unplaced-scaffold na na VUMR01000102.1 = NZ_VUMR01000102.1 Primary Assembly 2566 na seq103 unplaced-scaffold na na VUMR01000103.1 = NZ_VUMR01000103.1 Primary Assembly 2468 na seq104 unplaced-scaffold na na VUMR01000104.1 = NZ_VUMR01000104.1 Primary Assembly 2453 na seq105 unplaced-scaffold na na VUMR01000105.1 = NZ_VUMR01000105.1 Primary Assembly 2389 na seq106 unplaced-scaffold na na VUMR01000106.1 = NZ_VUMR01000106.1 Primary Assembly 2210 na seq107 unplaced-scaffold na na VUMR01000107.1 = NZ_VUMR01000107.1 Primary Assembly 2035 na seq108 unplaced-scaffold na na VUMR01000108.1 = NZ_VUMR01000108.1 Primary Assembly 1939 na seq109 unplaced-scaffold na na VUMR01000109.1 = NZ_VUMR01000109.1 Primary Assembly 1924 na seq110 unplaced-scaffold na na VUMR01000110.1 = NZ_VUMR01000110.1 Primary Assembly 1859 na seq111 unplaced-scaffold na na VUMR01000111.1 = NZ_VUMR01000111.1 Primary Assembly 1858 na seq112 unplaced-scaffold na na VUMR01000112.1 = NZ_VUMR01000112.1 Primary Assembly 1833 na seq113 unplaced-scaffold na na VUMR01000113.1 = NZ_VUMR01000113.1 Primary Assembly 1587 na seq114 unplaced-scaffold na na VUMR01000114.1 = NZ_VUMR01000114.1 Primary Assembly 1539 na seq115 unplaced-scaffold na na VUMR01000115.1 = NZ_VUMR01000115.1 Primary Assembly 1535 na seq116 unplaced-scaffold na na VUMR01000116.1 = NZ_VUMR01000116.1 Primary Assembly 1530 na seq117 unplaced-scaffold na na VUMR01000117.1 = NZ_VUMR01000117.1 Primary Assembly 1523 na seq118 unplaced-scaffold na na VUMR01000118.1 = NZ_VUMR01000118.1 Primary Assembly 1506 na seq119 unplaced-scaffold na na VUMR01000119.1 = NZ_VUMR01000119.1 Primary Assembly 1485 na seq120 unplaced-scaffold na na VUMR01000120.1 = NZ_VUMR01000120.1 Primary Assembly 1460 na seq121 unplaced-scaffold na na VUMR01000121.1 = NZ_VUMR01000121.1 Primary Assembly 1352 na seq122 unplaced-scaffold na na VUMR01000122.1 = NZ_VUMR01000122.1 Primary Assembly 1334 na seq123 unplaced-scaffold na na VUMR01000123.1 = NZ_VUMR01000123.1 Primary Assembly 1271 na seq124 unplaced-scaffold na na VUMR01000124.1 = NZ_VUMR01000124.1 Primary Assembly 1262 na seq125 unplaced-scaffold na na VUMR01000125.1 = NZ_VUMR01000125.1 Primary Assembly 1237 na seq126 unplaced-scaffold na na VUMR01000126.1 = NZ_VUMR01000126.1 Primary Assembly 1228 na seq127 unplaced-scaffold na na VUMR01000127.1 = NZ_VUMR01000127.1 Primary Assembly 1214 na seq128 unplaced-scaffold na na VUMR01000128.1 = NZ_VUMR01000128.1 Primary Assembly 1184 na seq129 unplaced-scaffold na na VUMR01000129.1 = NZ_VUMR01000129.1 Primary Assembly 1168 na seq130 unplaced-scaffold na na VUMR01000130.1 = NZ_VUMR01000130.1 Primary Assembly 1166 na seq131 unplaced-scaffold na na VUMR01000131.1 = NZ_VUMR01000131.1 Primary Assembly 1069 na seq132 unplaced-scaffold na na VUMR01000132.1 = NZ_VUMR01000132.1 Primary Assembly 1063 na seq133 unplaced-scaffold na na VUMR01000133.1 = NZ_VUMR01000133.1 Primary Assembly 1050 na