# Assembly name:  GENO_Phyp_1.0
# Organism name:  Pangasianodon hypophthalmus (striped catfish)
# Infraspecific name:  strain=Indonesia
# Sex:  male
# Taxid:          310915
# BioSample:      SAMN11969507
# BioProject:     PRJNA547555
# Submitter:      GenoFish
# Date:           2019-10-22
# Assembly type:  haploid
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    VFJC01
# Assembly method: SmartDeNovo v. MAY-2017; Juicer v. 1.5.6; 3D-DNA v. 180114
# Expected final version: yes
# Genome coverage: 147.0x
# Sequencing technology: Illumina HiSeq; Oxford Nanopore GridION
# Excluded from RefSeq: superseded by newer assembly for species
# GenBank assembly accession: GCA_009078355.1
# RefSeq assembly accession: GCF_009078355.1
# RefSeq assembly and GenBank assemblies identical: no
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_009078435.1	GCF_009078435.1	Primary Assembly
## GCA_009078465.1		non-nuclear
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
PHYPO_LG1	assembled-molecule	1	Chromosome	CM018541.1	=	NC_047595.1	Primary Assembly	35600603	na
PHYPO_LG2	assembled-molecule	2	Chromosome	CM018542.1	=	NC_047596.1	Primary Assembly	35203048	na
PHYPO_LG3	assembled-molecule	3	Chromosome	CM018543.1	=	NC_047597.1	Primary Assembly	33776708	na
PHYPO_LG4	assembled-molecule	4	Chromosome	CM018544.1	=	NC_047598.1	Primary Assembly	33267568	na
PHYPO_LG5	assembled-molecule	5	Chromosome	CM018545.1	=	NC_047599.1	Primary Assembly	32114633	na
PHYPO_LG6	assembled-molecule	6	Chromosome	CM018546.1	=	NC_047600.1	Primary Assembly	31307711	na
PHYPO_LG7	assembled-molecule	7	Chromosome	CM018547.1	=	NC_047601.1	Primary Assembly	30450434	na
PHYPO_LG8	assembled-molecule	8	Chromosome	CM018548.1	=	NC_047602.1	Primary Assembly	30442583	na
PHYPO_LG9	assembled-molecule	9	Chromosome	CM018549.1	=	NC_047603.1	Primary Assembly	29458963	na
PHYPO_LG10	assembled-molecule	10	Chromosome	CM018550.1	=	NC_047604.1	Primary Assembly	29376037	na
PHYPO_LG11	assembled-molecule	11	Chromosome	CM018551.1	=	NC_047605.1	Primary Assembly	26640196	na
PHYPO_LG12	assembled-molecule	12	Chromosome	CM018552.1	=	NC_047606.1	Primary Assembly	26563515	na
PHYPO_LG13	assembled-molecule	13	Chromosome	CM018553.1	=	NC_047607.1	Primary Assembly	26458119	na
PHYPO_LG14	assembled-molecule	14	Chromosome	CM018554.1	=	NC_047608.1	Primary Assembly	25848897	na
PHYPO_LG15	assembled-molecule	15	Chromosome	CM018555.1	=	NC_047609.1	Primary Assembly	25638904	na
PHYPO_LG16	assembled-molecule	16	Chromosome	CM018556.1	=	NC_047610.1	Primary Assembly	25111544	na
PHYPO_LG17	assembled-molecule	17	Chromosome	CM018557.1	=	NC_047611.1	Primary Assembly	24879021	na
PHYPO_LG18	assembled-molecule	18	Chromosome	CM018558.1	=	NC_047612.1	Primary Assembly	23372418	na
PHYPO_LG19	assembled-molecule	19	Chromosome	CM018559.1	=	NC_047613.1	Primary Assembly	22090854	na
PHYPO_LG20	assembled-molecule	20	Chromosome	CM018560.1	=	NC_047614.1	Primary Assembly	21552800	na
PHYPO_LG21	assembled-molecule	21	Chromosome	CM018561.1	=	NC_047615.1	Primary Assembly	21248730	na
PHYPO_LG22	assembled-molecule	22	Chromosome	CM018562.1	=	NC_047616.1	Primary Assembly	21037487	na
PHYPO_LG23	assembled-molecule	23	Chromosome	CM018563.1	=	NC_047617.1	Primary Assembly	20335669	na
PHYPO_LG24	assembled-molecule	24	Chromosome	CM018564.1	=	NC_047618.1	Primary Assembly	20251756	na
PHYPO_LG25	assembled-molecule	25	Chromosome	CM018565.1	=	NC_047619.1	Primary Assembly	19570078	na
PHYPO_LG26	assembled-molecule	26	Chromosome	CM018566.1	=	NC_047620.1	Primary Assembly	19313417	na
PHYPO_LG27	assembled-molecule	27	Chromosome	CM018567.1	=	NC_047621.1	Primary Assembly	18889892	na
PHYPO_LG28	assembled-molecule	28	Chromosome	CM018568.1	=	NC_047622.1	Primary Assembly	15845479	na
PHYPO_LG29	assembled-molecule	29	Chromosome	CM018569.1	=	NC_047623.1	Primary Assembly	15305753	na
PHYPO_LG30	assembled-molecule	30	Chromosome	CM018570.1	=	NC_047624.1	Primary Assembly	11744058	na
PHYPO_unplaced_scaf_1	unplaced-scaffold	na	na	VFJC01000032.1	=	NW_022995250.1	Primary Assembly	475917	na
PHYPO_unplaced_scaf_2	unplaced-scaffold	na	na	VFJC01000033.1	=	NW_022995282.1	Primary Assembly	464059	na
PHYPO_unplaced_scaf_3	unplaced-scaffold	na	na	VFJC01000034.1	=	NW_022995293.1	Primary Assembly	390549	na
PHYPO_unplaced_scaf_4	unplaced-scaffold	na	na	VFJC01000035.1	=	NW_022995304.1	Primary Assembly	382912	na
PHYPO_unplaced_scaf_5	unplaced-scaffold	na	na	VFJC01000036.1	=	NW_022995315.1	Primary Assembly	359744	na
PHYPO_unplaced_scaf_6	unplaced-scaffold	na	na	VFJC01000037.1	=	NW_022995326.1	Primary Assembly	340489	na
PHYPO_unplaced_scaf_7	unplaced-scaffold	na	na	VFJC01000038.1	=	NW_022995337.1	Primary Assembly	322983	na
PHYPO_unplaced_scaf_8	unplaced-scaffold	na	na	VFJC01000039.1	=	NW_022995348.1	Primary Assembly	209760	na
PHYPO_unplaced_scaf_9	unplaced-scaffold	na	na	VFJC01000040.1	=	NW_022995359.1	Primary Assembly	175010	na
PHYPO_unplaced_scaf_10	unplaced-scaffold	na	na	VFJC01000041.1	=	NW_022995251.1	Primary Assembly	162215	na
PHYPO_unplaced_scaf_11	unplaced-scaffold	na	na	VFJC01000042.1	=	NW_022995262.1	Primary Assembly	154072	na
PHYPO_unplaced_scaf_12	unplaced-scaffold	na	na	VFJC01000043.1	=	NW_022995273.1	Primary Assembly	149393	na
PHYPO_unplaced_scaf_13	unplaced-scaffold	na	na	VFJC01000044.1	=	NW_022995275.1	Primary Assembly	140786	na
PHYPO_unplaced_scaf_14	unplaced-scaffold	na	na	VFJC01000045.1	=	NW_022995276.1	Primary Assembly	124987	na
PHYPO_unplaced_scaf_15	unplaced-scaffold	na	na	VFJC01000046.1	=	NW_022995277.1	Primary Assembly	124987	na
PHYPO_unplaced_scaf_16	unplaced-scaffold	na	na	VFJC01000047.1	=	NW_022995278.1	Primary Assembly	110006	na
PHYPO_unplaced_scaf_17	unplaced-scaffold	na	na	VFJC01000048.1	=	NW_022995279.1	Primary Assembly	108030	na
PHYPO_unplaced_scaf_18	unplaced-scaffold	na	na	VFJC01000049.1	=	NW_022995280.1	Primary Assembly	99998	na
PHYPO_unplaced_scaf_19	unplaced-scaffold	na	na	VFJC01000050.1	=	NW_022995281.1	Primary Assembly	89435	na
PHYPO_unplaced_scaf_20	unplaced-scaffold	na	na	VFJC01000051.1	=	NW_022995283.1	Primary Assembly	88848	na
PHYPO_unplaced_scaf_21	unplaced-scaffold	na	na	VFJC01000052.1	=	NW_022995284.1	Primary Assembly	88369	na
PHYPO_unplaced_scaf_22	unplaced-scaffold	na	na	VFJC01000053.1	=	NW_022995285.1	Primary Assembly	80244	na
PHYPO_unplaced_scaf_23	unplaced-scaffold	na	na	VFJC01000054.1	=	NW_022995286.1	Primary Assembly	80006	na
PHYPO_unplaced_scaf_24	unplaced-scaffold	na	na	VFJC01000055.1	=	NW_022995287.1	Primary Assembly	67268	na
PHYPO_unplaced_scaf_25	unplaced-scaffold	na	na	VFJC01000056.1	=	NW_022995288.1	Primary Assembly	62000	na
PHYPO_unplaced_scaf_26	unplaced-scaffold	na	na	VFJC01000057.1	=	NW_022995289.1	Primary Assembly	58209	na
PHYPO_unplaced_scaf_27	unplaced-scaffold	na	na	VFJC01000058.1	=	NW_022995290.1	Primary Assembly	50009	na
PHYPO_unplaced_scaf_28	unplaced-scaffold	na	na	VFJC01000059.1	=	NW_022995291.1	Primary Assembly	50004	na
PHYPO_unplaced_scaf_29	unplaced-scaffold	na	na	VFJC01000060.1	=	NW_022995292.1	Primary Assembly	50001	na
PHYPO_unplaced_scaf_30	unplaced-scaffold	na	na	VFJC01000061.1	=	NW_022995294.1	Primary Assembly	50000	na
PHYPO_unplaced_scaf_31	unplaced-scaffold	na	na	VFJC01000062.1	=	NW_022995295.1	Primary Assembly	49996	na
PHYPO_unplaced_scaf_32	unplaced-scaffold	na	na	VFJC01000063.1	=	NW_022995296.1	Primary Assembly	49996	na
PHYPO_unplaced_scaf_33	unplaced-scaffold	na	na	VFJC01000064.1	=	NW_022995297.1	Primary Assembly	40006	na
PHYPO_unplaced_scaf_34	unplaced-scaffold	na	na	VFJC01000065.1	=	NW_022995298.1	Primary Assembly	39514	na
PHYPO_unplaced_scaf_35	unplaced-scaffold	na	na	VFJC01000066.1	=	NW_022995299.1	Primary Assembly	37327	na
PHYPO_unplaced_scaf_36	unplaced-scaffold	na	na	VFJC01000067.1	=	NW_022995300.1	Primary Assembly	36713	na
PHYPO_unplaced_scaf_37	unplaced-scaffold	na	na	VFJC01000068.1	=	NW_022995301.1	Primary Assembly	36159	na
PHYPO_unplaced_scaf_38	unplaced-scaffold	na	na	VFJC01000069.1	=	NW_022995302.1	Primary Assembly	33500	na
PHYPO_unplaced_scaf_39	unplaced-scaffold	na	na	VFJC01000070.1	=	NW_022995303.1	Primary Assembly	29468	na
PHYPO_unplaced_scaf_40	unplaced-scaffold	na	na	VFJC01000071.1	=	NW_022995305.1	Primary Assembly	28001	na
PHYPO_unplaced_scaf_41	unplaced-scaffold	na	na	VFJC01000072.1	=	NW_022995306.1	Primary Assembly	27652	na
PHYPO_unplaced_scaf_42	unplaced-scaffold	na	na	VFJC01000073.1	=	NW_022995307.1	Primary Assembly	26395	na
PHYPO_unplaced_scaf_43	unplaced-scaffold	na	na	VFJC01000074.1	=	NW_022995308.1	Primary Assembly	26149	na
PHYPO_unplaced_scaf_44	unplaced-scaffold	na	na	VFJC01000075.1	=	NW_022995309.1	Primary Assembly	25999	na
PHYPO_unplaced_scaf_45	unplaced-scaffold	na	na	VFJC01000076.1	=	NW_022995310.1	Primary Assembly	25562	na
PHYPO_unplaced_scaf_46	unplaced-scaffold	na	na	VFJC01000077.1	=	NW_022995311.1	Primary Assembly	25011	na
PHYPO_unplaced_scaf_47	unplaced-scaffold	na	na	VFJC01000078.1	=	NW_022995312.1	Primary Assembly	25001	na
PHYPO_unplaced_scaf_48	unplaced-scaffold	na	na	VFJC01000079.1	=	NW_022995313.1	Primary Assembly	25001	na
PHYPO_unplaced_scaf_49	unplaced-scaffold	na	na	VFJC01000080.1	=	NW_022995314.1	Primary Assembly	24987	na
PHYPO_unplaced_scaf_50	unplaced-scaffold	na	na	VFJC01000081.1	=	NW_022995316.1	Primary Assembly	23115	na
PHYPO_unplaced_scaf_51	unplaced-scaffold	na	na	VFJC01000082.1	=	NW_022995317.1	Primary Assembly	23045	na
PHYPO_unplaced_scaf_52	unplaced-scaffold	na	na	VFJC01000083.1	=	NW_022995318.1	Primary Assembly	20553	na
PHYPO_unplaced_scaf_53	unplaced-scaffold	na	na	VFJC01000084.1	=	NW_022995319.1	Primary Assembly	19852	na
PHYPO_unplaced_scaf_54	unplaced-scaffold	na	na	VFJC01000085.1	=	NW_022995320.1	Primary Assembly	19505	na
PHYPO_unplaced_scaf_55	unplaced-scaffold	na	na	VFJC01000086.1	=	NW_022995321.1	Primary Assembly	17809	na
PHYPO_unplaced_scaf_56	unplaced-scaffold	na	na	VFJC01000087.1	=	NW_022995322.1	Primary Assembly	17430	na
PHYPO_unplaced_scaf_57	unplaced-scaffold	na	na	VFJC01000088.1	=	NW_022995323.1	Primary Assembly	17172	na
PHYPO_unplaced_scaf_58	unplaced-scaffold	na	na	VFJC01000089.1	=	NW_022995324.1	Primary Assembly	16998	na
PHYPO_unplaced_scaf_59	unplaced-scaffold	na	na	VFJC01000090.1	=	NW_022995325.1	Primary Assembly	15395	na
PHYPO_unplaced_scaf_60	unplaced-scaffold	na	na	VFJC01000091.1	=	NW_022995327.1	Primary Assembly	15001	na
PHYPO_unplaced_scaf_61	unplaced-scaffold	na	na	VFJC01000092.1	=	NW_022995328.1	Primary Assembly	14748	na
PHYPO_unplaced_scaf_62	unplaced-scaffold	na	na	VFJC01000093.1	=	NW_022995329.1	Primary Assembly	12807	na
PHYPO_unplaced_scaf_63	unplaced-scaffold	na	na	VFJC01000094.1	=	NW_022995330.1	Primary Assembly	12446	na
PHYPO_unplaced_scaf_64	unplaced-scaffold	na	na	VFJC01000095.1	=	NW_022995331.1	Primary Assembly	12180	na
PHYPO_unplaced_scaf_65	unplaced-scaffold	na	na	VFJC01000096.1	=	NW_022995332.1	Primary Assembly	12115	na
PHYPO_unplaced_scaf_66	unplaced-scaffold	na	na	VFJC01000097.1	=	NW_022995333.1	Primary Assembly	12000	na
PHYPO_unplaced_scaf_67	unplaced-scaffold	na	na	VFJC01000098.1	=	NW_022995334.1	Primary Assembly	11866	na
PHYPO_unplaced_scaf_68	unplaced-scaffold	na	na	VFJC01000099.1	=	NW_022995335.1	Primary Assembly	11817	na
PHYPO_unplaced_scaf_69	unplaced-scaffold	na	na	VFJC01000100.1	=	NW_022995336.1	Primary Assembly	11279	na
PHYPO_unplaced_scaf_70	unplaced-scaffold	na	na	VFJC01000101.1	=	NW_022995338.1	Primary Assembly	11154	na
PHYPO_unplaced_scaf_71	unplaced-scaffold	na	na	VFJC01000102.1	=	NW_022995339.1	Primary Assembly	11000	na
PHYPO_unplaced_scaf_72	unplaced-scaffold	na	na	VFJC01000103.1	=	NW_022995340.1	Primary Assembly	10520	na
PHYPO_unplaced_scaf_73	unplaced-scaffold	na	na	VFJC01000104.1	=	NW_022995341.1	Primary Assembly	9932	na
PHYPO_unplaced_scaf_74	unplaced-scaffold	na	na	VFJC01000105.1	=	NW_022995342.1	Primary Assembly	9498	na
PHYPO_unplaced_scaf_75	unplaced-scaffold	na	na	VFJC01000106.1	=	NW_022995343.1	Primary Assembly	9168	na
PHYPO_unplaced_scaf_76	unplaced-scaffold	na	na	VFJC01000107.1	=	NW_022995344.1	Primary Assembly	8839	na
PHYPO_unplaced_scaf_77	unplaced-scaffold	na	na	VFJC01000108.1	=	NW_022995345.1	Primary Assembly	8210	na
PHYPO_unplaced_scaf_78	unplaced-scaffold	na	na	VFJC01000109.1	=	NW_022995346.1	Primary Assembly	8188	na
PHYPO_unplaced_scaf_79	unplaced-scaffold	na	na	VFJC01000110.1	=	NW_022995347.1	Primary Assembly	8075	na
PHYPO_unplaced_scaf_80	unplaced-scaffold	na	na	VFJC01000111.1	=	NW_022995349.1	Primary Assembly	8067	na
PHYPO_unplaced_scaf_81	unplaced-scaffold	na	na	VFJC01000112.1	=	NW_022995350.1	Primary Assembly	8002	na
PHYPO_unplaced_scaf_82	unplaced-scaffold	na	na	VFJC01000113.1	=	NW_022995351.1	Primary Assembly	7948	na
PHYPO_unplaced_scaf_83	unplaced-scaffold	na	na	VFJC01000114.1	=	NW_022995352.1	Primary Assembly	7936	na
PHYPO_unplaced_scaf_84	unplaced-scaffold	na	na	VFJC01000115.1	=	NW_022995353.1	Primary Assembly	7828	na
PHYPO_unplaced_scaf_85	unplaced-scaffold	na	na	VFJC01000116.1	=	NW_022995354.1	Primary Assembly	6885	na
PHYPO_unplaced_scaf_86	unplaced-scaffold	na	na	VFJC01000117.1	=	NW_022995355.1	Primary Assembly	5884	na
PHYPO_unplaced_scaf_87	unplaced-scaffold	na	na	VFJC01000118.1	=	NW_022995356.1	Primary Assembly	5004	na
PHYPO_unplaced_scaf_88	unplaced-scaffold	na	na	VFJC01000119.1	=	NW_022995357.1	Primary Assembly	5000	na
PHYPO_unplaced_scaf_89	unplaced-scaffold	na	na	VFJC01000120.1	=	NW_022995358.1	Primary Assembly	5000	na
PHYPO_unplaced_scaf_90	unplaced-scaffold	na	na	VFJC01000121.1	=	NW_022995360.1	Primary Assembly	4674	na
PHYPO_unplaced_scaf_91	unplaced-scaffold	na	na	VFJC01000122.1	=	NW_022995361.1	Primary Assembly	4637	na
PHYPO_unplaced_scaf_92	unplaced-scaffold	na	na	VFJC01000123.1	=	NW_022995362.1	Primary Assembly	4000	na
PHYPO_unplaced_scaf_93	unplaced-scaffold	na	na	VFJC01000124.1	=	NW_022995363.1	Primary Assembly	3831	na
PHYPO_unplaced_scaf_94	unplaced-scaffold	na	na	VFJC01000125.1	=	NW_022995364.1	Primary Assembly	3763	na
PHYPO_unplaced_scaf_95	unplaced-scaffold	na	na	VFJC01000126.1	=	NW_022995365.1	Primary Assembly	3446	na
PHYPO_unplaced_scaf_96	unplaced-scaffold	na	na	VFJC01000127.1	=	NW_022995366.1	Primary Assembly	3416	na
PHYPO_unplaced_scaf_97	unplaced-scaffold	na	na	VFJC01000128.1	=	NW_022995367.1	Primary Assembly	3130	na
PHYPO_unplaced_scaf_98	unplaced-scaffold	na	na	VFJC01000129.1	=	NW_022995368.1	Primary Assembly	3115	na
PHYPO_unplaced_scaf_99	unplaced-scaffold	na	na	VFJC01000130.1	=	NW_022995369.1	Primary Assembly	3008	na
PHYPO_unplaced_scaf_100	unplaced-scaffold	na	na	VFJC01000131.1	=	NW_022995252.1	Primary Assembly	3004	na
PHYPO_unplaced_scaf_101	unplaced-scaffold	na	na	VFJC01000132.1	=	NW_022995253.1	Primary Assembly	3001	na
PHYPO_unplaced_scaf_102	unplaced-scaffold	na	na	VFJC01000133.1	=	NW_022995254.1	Primary Assembly	3000	na
PHYPO_unplaced_scaf_103	unplaced-scaffold	na	na	VFJC01000134.1	=	NW_022995255.1	Primary Assembly	3000	na
PHYPO_unplaced_scaf_104	unplaced-scaffold	na	na	VFJC01000135.1	=	NW_022995256.1	Primary Assembly	2894	na
PHYPO_unplaced_scaf_105	unplaced-scaffold	na	na	VFJC01000136.1	=	NW_022995257.1	Primary Assembly	2825	na
PHYPO_unplaced_scaf_106	unplaced-scaffold	na	na	VFJC01000137.1	=	NW_022995258.1	Primary Assembly	2364	na
PHYPO_unplaced_scaf_107	unplaced-scaffold	na	na	VFJC01000138.1	=	NW_022995259.1	Primary Assembly	2000	na
PHYPO_unplaced_scaf_108	unplaced-scaffold	na	na	VFJC01000139.1	=	NW_022995260.1	Primary Assembly	1885	na
PHYPO_unplaced_scaf_109	unplaced-scaffold	na	na	VFJC01000140.1	=	NW_022995261.1	Primary Assembly	1799	na
PHYPO_unplaced_scaf_110	unplaced-scaffold	na	na	VFJC01000141.1	=	NW_022995263.1	Primary Assembly	1508	na
PHYPO_unplaced_scaf_111	unplaced-scaffold	na	na	VFJC01000142.1	=	NW_022995264.1	Primary Assembly	1196	na
PHYPO_unplaced_scaf_112	unplaced-scaffold	na	na	VFJC01000143.1	=	NW_022995265.1	Primary Assembly	1193	na
PHYPO_unplaced_scaf_113	unplaced-scaffold	na	na	VFJC01000144.1	=	NW_022995266.1	Primary Assembly	1116	na
PHYPO_unplaced_scaf_114	unplaced-scaffold	na	na	VFJC01000145.1	=	NW_022995267.1	Primary Assembly	1000	na
PHYPO_unplaced_scaf_115	unplaced-scaffold	na	na	VFJC01000146.1	=	NW_022995268.1	Primary Assembly	1000	na
PHYPO_unplaced_scaf_116	unplaced-scaffold	na	na	VFJC01000147.1	=	NW_022995269.1	Primary Assembly	1000	na
PHYPO_unplaced_scaf_117	unplaced-scaffold	na	na	VFJC01000148.1	=	NW_022995270.1	Primary Assembly	1000	na
PHYPO_unplaced_scaf_118	unplaced-scaffold	na	na	VFJC01000149.1	=	NW_022995271.1	Primary Assembly	1000	na
PHYPO_unplaced_scaf_119	unplaced-scaffold	na	na	VFJC01000150.1	=	NW_022995272.1	Primary Assembly	1000	na
PHYPO_unplaced_scaf_120	unplaced-scaffold	na	na	VFJC01000151.1	=	NW_022995274.1	Primary Assembly	1000	na
PHYPO_mitochondrion	assembled-molecule	MT	Mitochondrion	CM018571.1	<>	na	non-nuclear	16517	na