# Assembly name: ASM477074v1 # Organism name: Leptospira ognonensis (bacteria) # Infraspecific name: strain=201702476 # Taxid: 2484945 # BioSample: SAMN10316409 # BioProject: PRJNA480513 # Submitter: INRS-Institut Armand-Frappier # Date: 2019-04-10 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: RQGD01 # Assembly method: SPAdes v. 3.7.0 # Expected final version: yes # Genome coverage: 50x # Sequencing technology: Illumina NextSeq 500 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004770745.1 # RefSeq assembly accession: GCF_004770745.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004770775.1 GCF_004770775.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_20_covk_20.4629_covr_39.64_cutoff_5 unplaced-scaffold na na RQGD01000001.1 = NZ_RQGD01000001.1 Primary Assembly 35262 na NODE_9_covk_22.9243_covr_44.64_cutoff_5 unplaced-scaffold na na RQGD01000002.1 = NZ_RQGD01000002.1 Primary Assembly 169374 na NODE_38_covk_5.7127_covr_10.71_cutoff_5 unplaced-scaffold na na RQGD01000003.1 = NZ_RQGD01000003.1 Primary Assembly 1791 na NODE_29_covk_11.7939_covr_24.10_cutoff_5 unplaced-scaffold na na RQGD01000004.1 = NZ_RQGD01000004.1 Primary Assembly 4475 na NODE_10_covk_25.5757_covr_49.98_cutoff_5 unplaced-scaffold na na RQGD01000005.1 = NZ_RQGD01000005.1 Primary Assembly 160234 na NODE_32_covk_7.42294_covr_14.59_cutoff_5 unplaced-scaffold na na RQGD01000006.1 = NZ_RQGD01000006.1 Primary Assembly 3196 na NODE_21_covk_27.0206_covr_52.50_cutoff_5 unplaced-scaffold na na RQGD01000007.1 = NZ_RQGD01000007.1 Primary Assembly 25791 na NODE_19_covk_21.6011_covr_41.57_cutoff_5 unplaced-scaffold na na RQGD01000008.1 = NZ_RQGD01000008.1 Primary Assembly 39876 na NODE_15_covk_25.9814_covr_50.66_cutoff_5 unplaced-scaffold na na RQGD01000009.1 = NZ_RQGD01000009.1 Primary Assembly 79605 na NODE_6_covk_24.6219_covr_47.97_cutoff_5 unplaced-scaffold na na RQGD01000010.1 = NZ_RQGD01000010.1 Primary Assembly 268259 na NODE_60_covk_15.7296_covr_24.40_cutoff_5 unplaced-scaffold na na RQGD01000011.1 = NZ_RQGD01000011.1 Primary Assembly 785 na NODE_52_covk_4.79726_covr_7.86_cutoff_5 unplaced-scaffold na na RQGD01000012.1 = NZ_RQGD01000012.1 Primary Assembly 1096 na NODE_49_covk_6.5506_covr_15.18_cutoff_5 unplaced-scaffold na na RQGD01000013.1 = NZ_RQGD01000013.1 Primary Assembly 1239 na NODE_5_covk_30.8237_covr_60.08_cutoff_5 unplaced-scaffold na na RQGD01000014.1 = NZ_RQGD01000014.1 Primary Assembly 305521 na NODE_30_covk_12.6826_covr_24.82_cutoff_5 unplaced-scaffold na na RQGD01000015.1 = NZ_RQGD01000015.1 Primary Assembly 3553 na NODE_25_covk_13.0733_covr_25.57_cutoff_5 unplaced-scaffold na na RQGD01000016.1 = NZ_RQGD01000016.1 Primary Assembly 7006 na NODE_62_covk_13.7467_covr_20.34_cutoff_5 unplaced-scaffold na na RQGD01000017.1 = NZ_RQGD01000017.1 Primary Assembly 379 na NODE_42_covk_7.27667_covr_13.91_cutoff_5 unplaced-scaffold na na RQGD01000018.1 = NZ_RQGD01000018.1 Primary Assembly 1378 na NODE_27_covk_12.4551_covr_24.86_cutoff_5 unplaced-scaffold na na RQGD01000019.1 = NZ_RQGD01000019.1 Primary Assembly 5187 na NODE_8_covk_23.8476_covr_46.45_cutoff_5 unplaced-scaffold na na RQGD01000020.1 = NZ_RQGD01000020.1 Primary Assembly 169895 na NODE_41_covk_5.90798_covr_11.20_cutoff_5 unplaced-scaffold na na RQGD01000021.1 = NZ_RQGD01000021.1 Primary Assembly 1553 na NODE_3_covk_25.4806_covr_49.62_cutoff_5 unplaced-scaffold na na RQGD01000022.1 = NZ_RQGD01000022.1 Primary Assembly 392969 na NODE_12_covk_21.4848_covr_41.91_cutoff_5 unplaced-scaffold na na RQGD01000023.1 = NZ_RQGD01000023.1 Primary Assembly 140197 na NODE_14_covk_21.0435_covr_40.95_cutoff_5 unplaced-scaffold na na RQGD01000024.1 = NZ_RQGD01000024.1 Primary Assembly 126115 na NODE_7_covk_25.3979_covr_49.55_cutoff_5 unplaced-scaffold na na RQGD01000025.1 = NZ_RQGD01000025.1 Primary Assembly 185370 na NODE_57_covk_7.1066_covr_12.52_cutoff_5 unplaced-scaffold na na RQGD01000026.1 = NZ_RQGD01000026.1 Primary Assembly 938 na NODE_34_covk_28.277_covr_52.85_cutoff_5 unplaced-scaffold na na RQGD01000027.1 = NZ_RQGD01000027.1 Primary Assembly 2815 na NODE_63_covk_5.46637_covr_9.91_cutoff_5 unplaced-scaffold na na RQGD01000028.1 = NZ_RQGD01000028.1 Primary Assembly 521 na NODE_58_covk_5.02445_covr_9.16_cutoff_5 unplaced-scaffold na na RQGD01000029.1 = NZ_RQGD01000029.1 Primary Assembly 934 na NODE_37_covk_45.4684_covr_83.48_cutoff_5 unplaced-scaffold na na RQGD01000030.1 = NZ_RQGD01000030.1 Primary Assembly 1830 na NODE_17_covk_39.1309_covr_77.33_cutoff_5 unplaced-scaffold na na RQGD01000031.1 = NZ_RQGD01000031.1 Primary Assembly 60654 na NODE_51_covk_2.83933_covr_5.44_cutoff_5 unplaced-scaffold na na RQGD01000032.1 = NZ_RQGD01000032.1 Primary Assembly 1214 na NODE_18_covk_20.3087_covr_39.78_cutoff_5 unplaced-scaffold na na RQGD01000033.1 = NZ_RQGD01000033.1 Primary Assembly 51275 na NODE_1_covk_23.2378_covr_45.27_cutoff_5 unplaced-scaffold na na RQGD01000034.1 = NZ_RQGD01000034.1 Primary Assembly 498844 na NODE_4_covk_21.7889_covr_42.63_cutoff_5 unplaced-scaffold na na RQGD01000035.1 = NZ_RQGD01000035.1 Primary Assembly 380873 na NODE_28_covk_13.2047_covr_26.19_cutoff_5 unplaced-scaffold na na RQGD01000036.1 = NZ_RQGD01000036.1 Primary Assembly 4609 na NODE_39_covk_25.8013_covr_46.76_cutoff_5 unplaced-scaffold na na RQGD01000037.1 = NZ_RQGD01000037.1 Primary Assembly 1771 na NODE_48_covk_6.54788_covr_11.31_cutoff_5 unplaced-scaffold na na RQGD01000038.1 = NZ_RQGD01000038.1 Primary Assembly 1276 na NODE_13_covk_25.9773_covr_50.48_cutoff_5 unplaced-scaffold na na RQGD01000039.1 = NZ_RQGD01000039.1 Primary Assembly 126574 na NODE_67_covk_3.81933_covr_5.78_cutoff_5 unplaced-scaffold na na RQGD01000040.1 = NZ_RQGD01000040.1 Primary Assembly 313 na NODE_43_covk_24.4972_covr_48.10_cutoff_5 unplaced-scaffold na na RQGD01000041.1 = NZ_RQGD01000041.1 Primary Assembly 1349 na NODE_22_covk_18.4303_covr_35.80_cutoff_5 unplaced-scaffold na na RQGD01000042.1 = NZ_RQGD01000042.1 Primary Assembly 23398 na NODE_47_covk_11.357_covr_20.14_cutoff_5 unplaced-scaffold na na RQGD01000043.1 = NZ_RQGD01000043.1 Primary Assembly 1358 na NODE_40_covk_14.9541_covr_28.29_cutoff_5 unplaced-scaffold na na RQGD01000044.1 = NZ_RQGD01000044.1 Primary Assembly 1728 na NODE_11_covk_22.8454_covr_44.52_cutoff_5 unplaced-scaffold na na RQGD01000045.1 = NZ_RQGD01000045.1 Primary Assembly 150460 na NODE_2_covk_25.7264_covr_50.20_cutoff_5 unplaced-scaffold na na RQGD01000046.1 = NZ_RQGD01000046.1 Primary Assembly 425427 na NODE_16_covk_22.5807_covr_44.11_cutoff_5 unplaced-scaffold na na RQGD01000047.1 = NZ_RQGD01000047.1 Primary Assembly 62926 na NODE_50_covk_7.50131_covr_13.52_cutoff_5 unplaced-scaffold na na RQGD01000048.1 = NZ_RQGD01000048.1 Primary Assembly 1220 na NODE_35_covk_4.39362_covr_8.72_cutoff_5 unplaced-scaffold na na RQGD01000049.1 = NZ_RQGD01000049.1 Primary Assembly 2773 na NODE_24_covk_10.2008_covr_20.26_cutoff_5 unplaced-scaffold na na RQGD01000050.1 = NZ_RQGD01000050.1 Primary Assembly 8629 na NODE_46_covk_6.66922_covr_10.86_cutoff_5 unplaced-scaffold na na RQGD01000051.1 = NZ_RQGD01000051.1 Primary Assembly 1378 na NODE_44_covk_7.05_covr_12.62_cutoff_5 unplaced-scaffold na na RQGD01000052.1 = NZ_RQGD01000052.1 Primary Assembly 1475 na NODE_26_covk_17.0229_covr_33.46_cutoff_5 unplaced-scaffold na na RQGD01000053.1 = NZ_RQGD01000053.1 Primary Assembly 5759 na NODE_36_covk_27.9392_covr_46.09_cutoff_5 unplaced-scaffold na na RQGD01000054.1 = NZ_RQGD01000054.1 Primary Assembly 1884 na NODE_56_covk_5.98324_covr_9.10_cutoff_5 unplaced-scaffold na na RQGD01000055.1 = NZ_RQGD01000055.1 Primary Assembly 970 na NODE_53_covk_9.18098_covr_16.07_cutoff_5 unplaced-scaffold na na RQGD01000056.1 = NZ_RQGD01000056.1 Primary Assembly 1053 na NODE_45_covk_7.12097_covr_13.48_cutoff_5 unplaced-scaffold na na RQGD01000057.1 = NZ_RQGD01000057.1 Primary Assembly 1439 na NODE_33_covk_7.26153_covr_13.44_cutoff_5 unplaced-scaffold na na RQGD01000058.1 = NZ_RQGD01000058.1 Primary Assembly 2958 na NODE_59_covk_18.0337_covr_29.99_cutoff_5 unplaced-scaffold na na RQGD01000059.1 = NZ_RQGD01000059.1 Primary Assembly 727 na NODE_54_covk_4.06792_covr_7.84_cutoff_5 unplaced-scaffold na na RQGD01000060.1 = NZ_RQGD01000060.1 Primary Assembly 1032 na NODE_31_covk_44.8828_covr_83.81_cutoff_5 unplaced-scaffold na na RQGD01000061.1 = NZ_RQGD01000061.1 Primary Assembly 3248 na NODE_23_covk_22.0613_covr_42.69_cutoff_5 unplaced-scaffold na na RQGD01000062.1 = NZ_RQGD01000062.1 Primary Assembly 22375 na