# Assembly name: ASM434500v1 # Organism name: Extibacter muris (firmicutes) # Infraspecific name: strain=DSM 28560 # Taxid: 1796622 # BioSample: SAMEA3725514 # BioProject: PRJEB10572 # Submitter: TUM # Date: 2019-03-12 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: SMMX01 # Assembly method: SPAdes v. 3.11.1 # Expected final version: yes # Genome coverage: 262.0x # Sequencing technology: Illumina MiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_004345005.1 # RefSeq assembly accession: GCF_004345005.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_004345015.1 GCF_004345015.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1_length_366804_cov_89.152802 unplaced-scaffold na na SMMX01000001.1 = NZ_SMMX01000001.1 Primary Assembly 366804 na NODE_2_length_363123_cov_78.722361 unplaced-scaffold na na SMMX01000002.1 = NZ_SMMX01000002.1 Primary Assembly 363123 na NODE_3_length_362271_cov_96.907437 unplaced-scaffold na na SMMX01000003.1 = NZ_SMMX01000003.1 Primary Assembly 362271 na NODE_4_length_300579_cov_69.745460 unplaced-scaffold na na SMMX01000004.1 = NZ_SMMX01000004.1 Primary Assembly 300579 na NODE_5_length_236680_cov_114.731806 unplaced-scaffold na na SMMX01000005.1 = NZ_SMMX01000005.1 Primary Assembly 236680 na NODE_6_length_221830_cov_109.999026 unplaced-scaffold na na SMMX01000006.1 = NZ_SMMX01000006.1 Primary Assembly 221830 na NODE_7_length_179634_cov_98.409600 unplaced-scaffold na na SMMX01000007.1 = NZ_SMMX01000007.1 Primary Assembly 179634 na NODE_8_length_173504_cov_92.929599 unplaced-scaffold na na SMMX01000008.1 = NZ_SMMX01000008.1 Primary Assembly 173504 na NODE_9_length_170236_cov_102.542458 unplaced-scaffold na na SMMX01000009.1 = NZ_SMMX01000009.1 Primary Assembly 170236 na NODE_10_length_113738_cov_108.573404 unplaced-scaffold na na SMMX01000010.1 = NZ_SMMX01000010.1 Primary Assembly 113738 na NODE_11_length_108771_cov_135.932836 unplaced-scaffold na na SMMX01000011.1 = NZ_SMMX01000011.1 Primary Assembly 108771 na NODE_12_length_96435_cov_78.216898 unplaced-scaffold na na SMMX01000012.1 = NZ_SMMX01000012.1 Primary Assembly 96435 na NODE_13_length_90902_cov_80.512751 unplaced-scaffold na na SMMX01000013.1 = NZ_SMMX01000013.1 Primary Assembly 90902 na NODE_14_length_75056_cov_63.821671 unplaced-scaffold na na SMMX01000014.1 = NZ_SMMX01000014.1 Primary Assembly 75056 na NODE_15_length_74535_cov_111.770482 unplaced-scaffold na na SMMX01000015.1 = NZ_SMMX01000015.1 Primary Assembly 74535 na NODE_16_length_66047_cov_98.874757 unplaced-scaffold na na SMMX01000016.1 = NZ_SMMX01000016.1 Primary Assembly 66047 na NODE_17_length_62187_cov_116.819191 unplaced-scaffold na na SMMX01000017.1 = NZ_SMMX01000017.1 Primary Assembly 62187 na NODE_18_length_60254_cov_97.191262 unplaced-scaffold na na SMMX01000018.1 = NZ_SMMX01000018.1 Primary Assembly 60254 na NODE_19_length_58928_cov_83.580619 unplaced-scaffold na na SMMX01000019.1 = NZ_SMMX01000019.1 Primary Assembly 58928 na NODE_20_length_50827_cov_115.632485 unplaced-scaffold na na SMMX01000020.1 = NZ_SMMX01000020.1 Primary Assembly 50827 na NODE_21_length_47687_cov_125.559777 unplaced-scaffold na na SMMX01000021.1 = NZ_SMMX01000021.1 Primary Assembly 47687 na NODE_22_length_46395_cov_111.367317 unplaced-scaffold na na SMMX01000022.1 = NZ_SMMX01000022.1 Primary Assembly 46395 na NODE_23_length_43218_cov_102.680281 unplaced-scaffold na na SMMX01000023.1 = NZ_SMMX01000023.1 Primary Assembly 43218 na NODE_24_length_42379_cov_86.227114 unplaced-scaffold na na SMMX01000024.1 = NZ_SMMX01000024.1 Primary Assembly 42379 na NODE_25_length_41105_cov_115.680829 unplaced-scaffold na na SMMX01000025.1 = NZ_SMMX01000025.1 Primary Assembly 41105 na NODE_26_length_30058_cov_58.413818 unplaced-scaffold na na SMMX01000026.1 = NZ_SMMX01000026.1 Primary Assembly 30058 na NODE_27_length_28917_cov_134.008336 unplaced-scaffold na na SMMX01000027.1 = NZ_SMMX01000027.1 Primary Assembly 28917 na NODE_28_length_22508_cov_61.321523 unplaced-scaffold na na SMMX01000028.1 = NZ_SMMX01000028.1 Primary Assembly 22508 na NODE_29_length_20235_cov_93.770141 unplaced-scaffold na na SMMX01000029.1 = NZ_SMMX01000029.1 Primary Assembly 20235 na NODE_30_length_19645_cov_39.359104 unplaced-scaffold na na SMMX01000030.1 = NZ_SMMX01000030.1 Primary Assembly 19645 na NODE_31_length_14350_cov_62.917669 unplaced-scaffold na na SMMX01000031.1 = NZ_SMMX01000031.1 Primary Assembly 14350 na NODE_32_length_11466_cov_63.897963 unplaced-scaffold na na SMMX01000032.1 = NZ_SMMX01000032.1 Primary Assembly 11466 na NODE_33_length_10428_cov_83.250267 unplaced-scaffold na na SMMX01000033.1 = NZ_SMMX01000033.1 Primary Assembly 10428 na NODE_34_length_10282_cov_49.906352 unplaced-scaffold na na SMMX01000034.1 = NZ_SMMX01000034.1 Primary Assembly 10282 na NODE_35_length_10261_cov_95.593448 unplaced-scaffold na na SMMX01000035.1 = NZ_SMMX01000035.1 Primary Assembly 10261 na NODE_36_length_9868_cov_106.543065 unplaced-scaffold na na SMMX01000036.1 = NZ_SMMX01000036.1 Primary Assembly 9868 na NODE_37_length_5304_cov_127.507823 unplaced-scaffold na na SMMX01000037.1 = NZ_SMMX01000037.1 Primary Assembly 5304 na NODE_38_length_4962_cov_68.678800 unplaced-scaffold na na SMMX01000038.1 = NZ_SMMX01000038.1 Primary Assembly 4962 na NODE_39_length_4439_cov_44.815399 unplaced-scaffold na na SMMX01000039.1 = NZ_SMMX01000039.1 Primary Assembly 4439 na NODE_40_length_3214_cov_415.840622 unplaced-scaffold na na SMMX01000040.1 = NZ_SMMX01000040.1 Primary Assembly 3214 na NODE_41_length_1797_cov_406.683832 unplaced-scaffold na na SMMX01000041.1 = NZ_SMMX01000041.1 Primary Assembly 1797 na NODE_42_length_1559_cov_260.282821 unplaced-scaffold na na SMMX01000042.1 = NZ_SMMX01000042.1 Primary Assembly 1559 na NODE_43_length_1516_cov_358.900648 unplaced-scaffold na na SMMX01000043.1 = NZ_SMMX01000043.1 Primary Assembly 1516 na NODE_44_length_1458_cov_49.492863 unplaced-scaffold na na SMMX01000044.1 = NZ_SMMX01000044.1 Primary Assembly 1458 na NODE_45_length_1395_cov_0.100946 unplaced-scaffold na na SMMX01000045.1 = NZ_SMMX01000045.1 Primary Assembly 1395 na NODE_46_length_1250_cov_383.469279 unplaced-scaffold na na SMMX01000046.1 = NZ_SMMX01000046.1 Primary Assembly 1250 na NODE_47_length_1219_cov_255.624542 unplaced-scaffold na na SMMX01000047.1 = NZ_SMMX01000047.1 Primary Assembly 1219 na NODE_48_length_1196_cov_0.160714 unplaced-scaffold na na SMMX01000048.1 = NZ_SMMX01000048.1 Primary Assembly 1196 na NODE_49_length_1174_cov_12.688634 unplaced-scaffold na na SMMX01000049.1 = NZ_SMMX01000049.1 Primary Assembly 1174 na NODE_50_length_1077_cov_0.287368 unplaced-scaffold na na SMMX01000050.1 = NZ_SMMX01000050.1 Primary Assembly 1077 na NODE_51_length_1035_cov_446.202643 unplaced-scaffold na na SMMX01000051.1 = NZ_SMMX01000051.1 Primary Assembly 1035 na NODE_52_length_1025_cov_0.184855 unplaced-scaffold na na SMMX01000052.1 = NZ_SMMX01000052.1 Primary Assembly 1025 na NODE_53_length_992_cov_87.161850 unplaced-scaffold na na SMMX01000053.1 = NZ_SMMX01000053.1 Primary Assembly 992 na NODE_55_length_927_cov_0.155000 unplaced-scaffold na na SMMX01000054.1 = NZ_SMMX01000054.1 Primary Assembly 927 na NODE_56_length_897_cov_0.143782 unplaced-scaffold na na SMMX01000055.1 = NZ_SMMX01000055.1 Primary Assembly 897 na NODE_57_length_887_cov_62.411842 unplaced-scaffold na na SMMX01000056.1 = NZ_SMMX01000056.1 Primary Assembly 887 na NODE_58_length_861_cov_0.081744 unplaced-scaffold na na SMMX01000057.1 = NZ_SMMX01000057.1 Primary Assembly 861 na NODE_59_length_833_cov_0.083569 unplaced-scaffold na na SMMX01000058.1 = NZ_SMMX01000058.1 Primary Assembly 833 na NODE_60_length_831_cov_0.095170 unplaced-scaffold na na SMMX01000059.1 = NZ_SMMX01000059.1 Primary Assembly 831 na NODE_61_length_828_cov_0.095578 unplaced-scaffold na na SMMX01000060.1 = NZ_SMMX01000060.1 Primary Assembly 828 na NODE_62_length_820_cov_255.181818 unplaced-scaffold na na SMMX01000061.1 = NZ_SMMX01000061.1 Primary Assembly 820 na NODE_63_length_815_cov_0.228198 unplaced-scaffold na na SMMX01000062.1 = NZ_SMMX01000062.1 Primary Assembly 815 na NODE_64_length_812_cov_0.094891 unplaced-scaffold na na SMMX01000063.1 = NZ_SMMX01000063.1 Primary Assembly 812 na NODE_65_length_796_cov_0.113602 unplaced-scaffold na na SMMX01000064.1 = NZ_SMMX01000064.1 Primary Assembly 796 na NODE_66_length_785_cov_0.243161 unplaced-scaffold na na SMMX01000065.1 = NZ_SMMX01000065.1 Primary Assembly 785 na NODE_67_length_767_cov_0.148438 unplaced-scaffold na na SMMX01000066.1 = NZ_SMMX01000066.1 Primary Assembly 767 na NODE_68_length_755_cov_0.031847 unplaced-scaffold na na SMMX01000067.1 = NZ_SMMX01000067.1 Primary Assembly 755 na NODE_69_length_754_cov_0.148325 unplaced-scaffold na na SMMX01000068.1 = NZ_SMMX01000068.1 Primary Assembly 754 na NODE_70_length_714_cov_0.047700 unplaced-scaffold na na SMMX01000069.1 = NZ_SMMX01000069.1 Primary Assembly 714 na NODE_71_length_707_cov_0.243103 unplaced-scaffold na na SMMX01000070.1 = NZ_SMMX01000070.1 Primary Assembly 707 na NODE_72_length_699_cov_0.218531 unplaced-scaffold na na SMMX01000071.1 = NZ_SMMX01000071.1 Primary Assembly 699 na NODE_73_length_680_cov_80.401447 unplaced-scaffold na na SMMX01000072.1 = NZ_SMMX01000072.1 Primary Assembly 680 na NODE_74_length_677_cov_0.074545 unplaced-scaffold na na SMMX01000073.1 = NZ_SMMX01000073.1 Primary Assembly 677 na NODE_75_length_671_cov_0.402574 unplaced-scaffold na na SMMX01000074.1 = NZ_SMMX01000074.1 Primary Assembly 671 na NODE_76_length_668_cov_1.053604 unplaced-scaffold na na SMMX01000075.1 = NZ_SMMX01000075.1 Primary Assembly 668 na NODE_77_length_667_cov_0.140741 unplaced-scaffold na na SMMX01000076.1 = NZ_SMMX01000076.1 Primary Assembly 667 na NODE_78_length_660_cov_0.125704 unplaced-scaffold na na SMMX01000077.1 = NZ_SMMX01000077.1 Primary Assembly 660 na NODE_79_length_659_cov_0.142857 unplaced-scaffold na na SMMX01000078.1 = NZ_SMMX01000078.1 Primary Assembly 659 na NODE_80_length_641_cov_0.142023 unplaced-scaffold na na SMMX01000079.1 = NZ_SMMX01000079.1 Primary Assembly 641 na NODE_81_length_637_cov_0.194118 unplaced-scaffold na na SMMX01000080.1 = NZ_SMMX01000080.1 Primary Assembly 637 na NODE_82_length_636_cov_0.292731 unplaced-scaffold na na SMMX01000081.1 = NZ_SMMX01000081.1 Primary Assembly 636 na NODE_83_length_624_cov_0.185111 unplaced-scaffold na na SMMX01000082.1 = NZ_SMMX01000082.1 Primary Assembly 624 na NODE_84_length_619_cov_0.117886 unplaced-scaffold na na SMMX01000083.1 = NZ_SMMX01000083.1 Primary Assembly 619 na NODE_85_length_617_cov_0.220408 unplaced-scaffold na na SMMX01000084.1 = NZ_SMMX01000084.1 Primary Assembly 617 na NODE_86_length_608_cov_0.060291 unplaced-scaffold na na SMMX01000085.1 = NZ_SMMX01000085.1 Primary Assembly 608 na NODE_87_length_599_cov_0.224576 unplaced-scaffold na na SMMX01000086.1 = NZ_SMMX01000086.1 Primary Assembly 599 na NODE_88_length_598_cov_0.320594 unplaced-scaffold na na SMMX01000087.1 = NZ_SMMX01000087.1 Primary Assembly 598 na NODE_89_length_597_cov_0.004255 unplaced-scaffold na na SMMX01000088.1 = NZ_SMMX01000088.1 Primary Assembly 597 na NODE_90_length_591_cov_0.265086 unplaced-scaffold na na SMMX01000089.1 = NZ_SMMX01000089.1 Primary Assembly 591 na NODE_91_length_584_cov_0.271335 unplaced-scaffold na na SMMX01000090.1 = NZ_SMMX01000090.1 Primary Assembly 584 na NODE_92_length_565_cov_0.219178 unplaced-scaffold na na SMMX01000091.1 = NZ_SMMX01000091.1 Primary Assembly 565 na NODE_93_length_564_cov_0.354691 unplaced-scaffold na na SMMX01000092.1 = NZ_SMMX01000092.1 Primary Assembly 564 na NODE_94_length_558_cov_0.329466 unplaced-scaffold na na SMMX01000093.1 = NZ_SMMX01000093.1 Primary Assembly 558 na NODE_95_length_557_cov_0.132558 unplaced-scaffold na na SMMX01000094.1 = NZ_SMMX01000094.1 Primary Assembly 557 na NODE_96_length_554_cov_0.182670 unplaced-scaffold na na SMMX01000095.1 = NZ_SMMX01000095.1 Primary Assembly 554 na NODE_97_length_551_cov_0.179245 unplaced-scaffold na na SMMX01000096.1 = NZ_SMMX01000096.1 Primary Assembly 551 na NODE_98_length_548_cov_0.190024 unplaced-scaffold na na SMMX01000097.1 = NZ_SMMX01000097.1 Primary Assembly 548 na NODE_99_length_547_cov_0.173810 unplaced-scaffold na na SMMX01000098.1 = NZ_SMMX01000098.1 Primary Assembly 547 na NODE_100_length_540_cov_0.046005 unplaced-scaffold na na SMMX01000099.1 = NZ_SMMX01000099.1 Primary Assembly 540 na NODE_101_length_538_cov_0.296837 unplaced-scaffold na na SMMX01000100.1 = NZ_SMMX01000100.1 Primary Assembly 538 na NODE_102_length_535_cov_129.651961 unplaced-scaffold na na SMMX01000101.1 = NZ_SMMX01000101.1 Primary Assembly 535 na NODE_103_length_525_cov_0.334171 unplaced-scaffold na na SMMX01000102.1 = NZ_SMMX01000102.1 Primary Assembly 525 na NODE_104_length_524_cov_0.098237 unplaced-scaffold na na SMMX01000103.1 = NZ_SMMX01000103.1 Primary Assembly 524 na NODE_105_length_522_cov_0.240506 unplaced-scaffold na na SMMX01000104.1 = NZ_SMMX01000104.1 Primary Assembly 522 na NODE_106_length_522_cov_0.000000 unplaced-scaffold na na SMMX01000105.1 = NZ_SMMX01000105.1 Primary Assembly 522 na NODE_107_length_501_cov_0.262032 unplaced-scaffold na na SMMX01000106.1 = NZ_SMMX01000106.1 Primary Assembly 501 na NODE_108_length_501_cov_0.227273 unplaced-scaffold na na SMMX01000107.1 = NZ_SMMX01000107.1 Primary Assembly 501 na