# Assembly name: ASM171961v1 # Organism name: Neptunicoccus sediminis (a-proteobacteria) # Infraspecific name: strain=CY02 # Taxid: 1892596 # BioSample: SAMN05582966 # BioProject: PRJNA339194 # Submitter: Qingdao Agricultural University # Date: 2016-09-06 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: MDVX01 # Assembly method: SOAPdenovo v. 2.14 # Expected final version: yes # Genome coverage: 135.0x # Sequencing technology: Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001719615.1 # RefSeq assembly accession: GCF_001719615.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001719625.1 GCF_001719625.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Scaffold1_1 unplaced-scaffold na na MDVX01000001.1 = NZ_MDVX01000001.1 Primary Assembly 849958 na Scaffold2_1 unplaced-scaffold na na MDVX01000002.1 = NZ_MDVX01000002.1 Primary Assembly 530576 na Scaffold3_1 unplaced-scaffold na na MDVX01000003.1 = NZ_MDVX01000003.1 Primary Assembly 411594 na Scaffold3_2 unplaced-scaffold na na MDVX01000004.1 = NZ_MDVX01000004.1 Primary Assembly 91992 na Scaffold4_1 unplaced-scaffold na na MDVX01000005.1 = NZ_MDVX01000005.1 Primary Assembly 1261 na Scaffold4_2 unplaced-scaffold na na MDVX01000006.1 = NZ_MDVX01000006.1 Primary Assembly 319 na Scaffold4_3 unplaced-scaffold na na MDVX01000007.1 = NZ_MDVX01000007.1 Primary Assembly 636 na Scaffold4_4 unplaced-scaffold na na MDVX01000008.1 = NZ_MDVX01000008.1 Primary Assembly 316018 na Scaffold4_5 unplaced-scaffold na na MDVX01000009.1 = NZ_MDVX01000009.1 Primary Assembly 132111 na Scaffold5_1 unplaced-scaffold na na MDVX01000010.1 = NZ_MDVX01000010.1 Primary Assembly 17002 na Scaffold5_2 unplaced-scaffold na na MDVX01000011.1 = NZ_MDVX01000011.1 Primary Assembly 293101 na Scaffold6_1 unplaced-scaffold na na MDVX01000012.1 = NZ_MDVX01000012.1 Primary Assembly 206437 na Scaffold7_1 unplaced-scaffold na na MDVX01000013.1 = NZ_MDVX01000013.1 Primary Assembly 165277 na Scaffold8_1 unplaced-scaffold na na MDVX01000014.1 = NZ_MDVX01000014.1 Primary Assembly 104744 na Scaffold8_2 unplaced-scaffold na na MDVX01000015.1 = NZ_MDVX01000015.1 Primary Assembly 46330 na Scaffold9_1 unplaced-scaffold na na MDVX01000016.1 = NZ_MDVX01000016.1 Primary Assembly 108188 na Scaffold10_1 unplaced-scaffold na na MDVX01000017.1 = NZ_MDVX01000017.1 Primary Assembly 92988 na Scaffold11_1 unplaced-scaffold na na MDVX01000018.1 = NZ_MDVX01000018.1 Primary Assembly 87096 na Scaffold12_1 unplaced-scaffold na na MDVX01000019.1 = NZ_MDVX01000019.1 Primary Assembly 66460 na Scaffold13_1 unplaced-scaffold na na MDVX01000020.1 = NZ_MDVX01000020.1 Primary Assembly 44692 na Scaffold14_1 unplaced-scaffold na na MDVX01000021.1 = NZ_MDVX01000021.1 Primary Assembly 43197 na Scaffold15_1 unplaced-scaffold na na MDVX01000022.1 = NZ_MDVX01000022.1 Primary Assembly 1214 na Scaffold15_2 unplaced-scaffold na na MDVX01000023.1 = NZ_MDVX01000023.1 Primary Assembly 3300 na Scaffold15_3 unplaced-scaffold na na MDVX01000024.1 = NZ_MDVX01000024.1 Primary Assembly 790 na Scaffold15_4 unplaced-scaffold na na MDVX01000025.1 = NZ_MDVX01000025.1 Primary Assembly 5169 na Scaffold15_5 unplaced-scaffold na na MDVX01000026.1 = NZ_MDVX01000026.1 Primary Assembly 1188 na Scaffold15_6 unplaced-scaffold na na MDVX01000027.1 = NZ_MDVX01000027.1 Primary Assembly 691 na Scaffold15_7 unplaced-scaffold na na MDVX01000028.1 = NZ_MDVX01000028.1 Primary Assembly 2000 na Scaffold15_8 unplaced-scaffold na na MDVX01000029.1 = NZ_MDVX01000029.1 Primary Assembly 5205 na Scaffold15_9 unplaced-scaffold na na MDVX01000030.1 = NZ_MDVX01000030.1 Primary Assembly 4007 na Scaffold15_10 unplaced-scaffold na na MDVX01000031.1 = NZ_MDVX01000031.1 Primary Assembly 2651 na Scaffold15_11 unplaced-scaffold na na MDVX01000032.1 = NZ_MDVX01000032.1 Primary Assembly 3287 na Scaffold15_12 unplaced-scaffold na na MDVX01000033.1 = NZ_MDVX01000033.1 Primary Assembly 4938 na Scaffold15_13 unplaced-scaffold na na MDVX01000034.1 = NZ_MDVX01000034.1 Primary Assembly 1034 na Scaffold15_14 unplaced-scaffold na na MDVX01000035.1 = NZ_MDVX01000035.1 Primary Assembly 1735 na Scaffold15_15 unplaced-scaffold na na MDVX01000036.1 = NZ_MDVX01000036.1 Primary Assembly 3412 na Scaffold16_1 unplaced-scaffold na na MDVX01000037.1 = NZ_MDVX01000037.1 Primary Assembly 35358 na Scaffold17_1 unplaced-scaffold na na MDVX01000038.1 = NZ_MDVX01000038.1 Primary Assembly 28552 na Scaffold18_1 unplaced-scaffold na na MDVX01000039.1 = NZ_MDVX01000039.1 Primary Assembly 5297 na Scaffold18_2 unplaced-scaffold na na MDVX01000040.1 = NZ_MDVX01000040.1 Primary Assembly 3952 na Scaffold18_3 unplaced-scaffold na na MDVX01000041.1 = NZ_MDVX01000041.1 Primary Assembly 2581 na Scaffold18_4 unplaced-scaffold na na MDVX01000042.1 = NZ_MDVX01000042.1 Primary Assembly 2349 na Scaffold18_5 unplaced-scaffold na na MDVX01000043.1 = NZ_MDVX01000043.1 Primary Assembly 2214 na Scaffold18_6 unplaced-scaffold na na MDVX01000044.1 = NZ_MDVX01000044.1 Primary Assembly 5053 na Scaffold18_7 unplaced-scaffold na na MDVX01000045.1 = NZ_MDVX01000045.1 Primary Assembly 3826 na Scaffold19_1 unplaced-scaffold na na MDVX01000046.1 = NZ_MDVX01000046.1 Primary Assembly 19770 na Scaffold20_1 unplaced-scaffold na na MDVX01000047.1 = NZ_MDVX01000047.1 Primary Assembly 2342 na Scaffold20_2 unplaced-scaffold na na MDVX01000048.1 = NZ_MDVX01000048.1 Primary Assembly 7724 na Scaffold20_3 unplaced-scaffold na na MDVX01000049.1 = NZ_MDVX01000049.1 Primary Assembly 4587 na Scaffold20_4 unplaced-scaffold na na MDVX01000050.1 = NZ_MDVX01000050.1 Primary Assembly 393 na Scaffold20_5 unplaced-scaffold na na MDVX01000051.1 = NZ_MDVX01000051.1 Primary Assembly 640 na Scaffold21_1 unplaced-scaffold na na MDVX01000052.1 = NZ_MDVX01000052.1 Primary Assembly 323 na Scaffold21_2 unplaced-scaffold na na MDVX01000053.1 = NZ_MDVX01000053.1 Primary Assembly 11841 na Scaffold22_1 unplaced-scaffold na na MDVX01000054.1 = NZ_MDVX01000054.1 Primary Assembly 1975 na Scaffold22_2 unplaced-scaffold na na MDVX01000055.1 = NZ_MDVX01000055.1 Primary Assembly 2457 na Scaffold22_3 unplaced-scaffold na na MDVX01000056.1 = NZ_MDVX01000056.1 Primary Assembly 6225 na Scaffold23_1 unplaced-scaffold na na MDVX01000057.1 = NZ_MDVX01000057.1 Primary Assembly 10429 na Scaffold24_1 unplaced-scaffold na na MDVX01000058.1 = NZ_MDVX01000058.1 Primary Assembly 10105 na Scaffold25_1 unplaced-scaffold na na MDVX01000059.1 = NZ_MDVX01000059.1 Primary Assembly 9313 na Scaffold26_1 unplaced-scaffold na na MDVX01000060.1 = NZ_MDVX01000060.1 Primary Assembly 3250 na Scaffold26_2 unplaced-scaffold na na MDVX01000061.1 = NZ_MDVX01000061.1 Primary Assembly 488 na Scaffold26_3 unplaced-scaffold na na MDVX01000062.1 = NZ_MDVX01000062.1 Primary Assembly 1330 na Scaffold26_4 unplaced-scaffold na na MDVX01000063.1 = NZ_MDVX01000063.1 Primary Assembly 2164 na Scaffold26_5 unplaced-scaffold na na MDVX01000064.1 = NZ_MDVX01000064.1 Primary Assembly 267 na Scaffold26_6 unplaced-scaffold na na MDVX01000065.1 = NZ_MDVX01000065.1 Primary Assembly 1013 na Scaffold27_1 unplaced-scaffold na na MDVX01000066.1 = NZ_MDVX01000066.1 Primary Assembly 8207 na Scaffold28_1 unplaced-scaffold na na MDVX01000067.1 = NZ_MDVX01000067.1 Primary Assembly 2892 na Scaffold28_2 unplaced-scaffold na na MDVX01000068.1 = NZ_MDVX01000068.1 Primary Assembly 3597 na Scaffold29_1 unplaced-scaffold na na MDVX01000069.1 = NZ_MDVX01000069.1 Primary Assembly 3455 na Scaffold30_1 unplaced-scaffold na na MDVX01000070.1 = NZ_MDVX01000070.1 Primary Assembly 2529 na Scaffold31_1 unplaced-scaffold na na MDVX01000071.1 = NZ_MDVX01000071.1 Primary Assembly 2496 na Scaffold32_1 unplaced-scaffold na na MDVX01000072.1 = NZ_MDVX01000072.1 Primary Assembly 2494 na Scaffold33_1 unplaced-scaffold na na MDVX01000073.1 = NZ_MDVX01000073.1 Primary Assembly 1875 na