# Assembly name: ASM161346v1 # Organism name: Nocardia niwae NBRC 108934 = DSM 45340 (high G+C Gram-positive bacteria) # Infraspecific name: strain=NBRC 108934 # Taxid: 1223489 # BioSample: SAMD00040660 # BioProject: PRJDB472 # Submitter: National Institute of Technology and Evaluation # Date: 2016-04-01 # Assembly type: na # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: BDCK01 # Assembly method: newbler v. 2.6 # Genome coverage: 162x # Sequencing technology: 454 GS-FLX Titanium; Illumina HiSeq 1000 # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001613465.1 # RefSeq assembly accession: GCF_001613465.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001613475.1 GCF_001613475.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name BDCK01000001.1 unplaced-scaffold na na BDCK01000001.1 = NZ_BDCK01000001.1 Primary Assembly 93987 na BDCK01000002.1 unplaced-scaffold na na BDCK01000002.1 = NZ_BDCK01000002.1 Primary Assembly 313024 na BDCK01000003.1 unplaced-scaffold na na BDCK01000003.1 = NZ_BDCK01000003.1 Primary Assembly 162337 na BDCK01000004.1 unplaced-scaffold na na BDCK01000004.1 = NZ_BDCK01000004.1 Primary Assembly 940 na BDCK01000005.1 unplaced-scaffold na na BDCK01000005.1 = NZ_BDCK01000005.1 Primary Assembly 4457 na BDCK01000006.1 unplaced-scaffold na na BDCK01000006.1 = NZ_BDCK01000006.1 Primary Assembly 2715 na BDCK01000007.1 unplaced-scaffold na na BDCK01000007.1 = NZ_BDCK01000007.1 Primary Assembly 3880 na BDCK01000008.1 unplaced-scaffold na na BDCK01000008.1 = NZ_BDCK01000008.1 Primary Assembly 2980 na BDCK01000009.1 unplaced-scaffold na na BDCK01000009.1 = NZ_BDCK01000009.1 Primary Assembly 2828 na BDCK01000010.1 unplaced-scaffold na na BDCK01000010.1 = NZ_BDCK01000010.1 Primary Assembly 4798 na BDCK01000011.1 unplaced-scaffold na na BDCK01000011.1 = NZ_BDCK01000011.1 Primary Assembly 173672 na BDCK01000012.1 unplaced-scaffold na na BDCK01000012.1 = NZ_BDCK01000012.1 Primary Assembly 1213 na BDCK01000013.1 unplaced-scaffold na na BDCK01000013.1 = NZ_BDCK01000013.1 Primary Assembly 15518 na BDCK01000014.1 unplaced-scaffold na na BDCK01000014.1 = NZ_BDCK01000014.1 Primary Assembly 23635 na BDCK01000015.1 unplaced-scaffold na na BDCK01000015.1 = NZ_BDCK01000015.1 Primary Assembly 767673 na BDCK01000016.1 unplaced-scaffold na na BDCK01000016.1 = NZ_BDCK01000016.1 Primary Assembly 394877 na BDCK01000017.1 unplaced-scaffold na na BDCK01000017.1 = NZ_BDCK01000017.1 Primary Assembly 378064 na BDCK01000018.1 unplaced-scaffold na na BDCK01000018.1 = NZ_BDCK01000018.1 Primary Assembly 255507 na BDCK01000019.1 unplaced-scaffold na na BDCK01000019.1 = NZ_BDCK01000019.1 Primary Assembly 99840 na BDCK01000020.1 unplaced-scaffold na na BDCK01000020.1 = NZ_BDCK01000020.1 Primary Assembly 339085 na BDCK01000021.1 unplaced-scaffold na na BDCK01000021.1 = NZ_BDCK01000021.1 Primary Assembly 172804 na BDCK01000022.1 unplaced-scaffold na na BDCK01000022.1 = NZ_BDCK01000022.1 Primary Assembly 108288 na BDCK01000023.1 unplaced-scaffold na na BDCK01000023.1 = NZ_BDCK01000023.1 Primary Assembly 280922 na BDCK01000024.1 unplaced-scaffold na na BDCK01000024.1 = NZ_BDCK01000024.1 Primary Assembly 279471 na BDCK01000025.1 unplaced-scaffold na na BDCK01000025.1 = NZ_BDCK01000025.1 Primary Assembly 112268 na BDCK01000026.1 unplaced-scaffold na na BDCK01000026.1 = NZ_BDCK01000026.1 Primary Assembly 161268 na BDCK01000027.1 unplaced-scaffold na na BDCK01000027.1 = NZ_BDCK01000027.1 Primary Assembly 243915 na BDCK01000028.1 unplaced-scaffold na na BDCK01000028.1 = NZ_BDCK01000028.1 Primary Assembly 109513 na BDCK01000029.1 unplaced-scaffold na na BDCK01000029.1 = NZ_BDCK01000029.1 Primary Assembly 115525 na BDCK01000030.1 unplaced-scaffold na na BDCK01000030.1 = NZ_BDCK01000030.1 Primary Assembly 210102 na BDCK01000031.1 unplaced-scaffold na na BDCK01000031.1 = NZ_BDCK01000031.1 Primary Assembly 206629 na BDCK01000032.1 unplaced-scaffold na na BDCK01000032.1 = NZ_BDCK01000032.1 Primary Assembly 161422 na BDCK01000033.1 unplaced-scaffold na na BDCK01000033.1 = NZ_BDCK01000033.1 Primary Assembly 43092 na BDCK01000034.1 unplaced-scaffold na na BDCK01000034.1 = NZ_BDCK01000034.1 Primary Assembly 189654 na BDCK01000035.1 unplaced-scaffold na na BDCK01000035.1 = NZ_BDCK01000035.1 Primary Assembly 72174 na BDCK01000036.1 unplaced-scaffold na na BDCK01000036.1 = NZ_BDCK01000036.1 Primary Assembly 94727 na BDCK01000037.1 unplaced-scaffold na na BDCK01000037.1 = NZ_BDCK01000037.1 Primary Assembly 153039 na BDCK01000038.1 unplaced-scaffold na na BDCK01000038.1 = NZ_BDCK01000038.1 Primary Assembly 134434 na BDCK01000039.1 unplaced-scaffold na na BDCK01000039.1 = NZ_BDCK01000039.1 Primary Assembly 10202 na BDCK01000040.1 unplaced-scaffold na na BDCK01000040.1 = NZ_BDCK01000040.1 Primary Assembly 1534 na BDCK01000041.1 unplaced-scaffold na na BDCK01000041.1 = NZ_BDCK01000041.1 Primary Assembly 144464 na BDCK01000042.1 unplaced-scaffold na na BDCK01000042.1 = NZ_BDCK01000042.1 Primary Assembly 45111 na BDCK01000043.1 unplaced-scaffold na na BDCK01000043.1 = NZ_BDCK01000043.1 Primary Assembly 54540 na BDCK01000044.1 unplaced-scaffold na na BDCK01000044.1 = NZ_BDCK01000044.1 Primary Assembly 98587 na BDCK01000045.1 unplaced-scaffold na na BDCK01000045.1 = NZ_BDCK01000045.1 Primary Assembly 87684 na BDCK01000046.1 unplaced-scaffold na na BDCK01000046.1 = NZ_BDCK01000046.1 Primary Assembly 82763 na BDCK01000047.1 unplaced-scaffold na na BDCK01000047.1 = NZ_BDCK01000047.1 Primary Assembly 78088 na BDCK01000048.1 unplaced-scaffold na na BDCK01000048.1 = NZ_BDCK01000048.1 Primary Assembly 70339 na BDCK01000049.1 unplaced-scaffold na na BDCK01000049.1 = NZ_BDCK01000049.1 Primary Assembly 64273 na BDCK01000050.1 unplaced-scaffold na na BDCK01000050.1 = NZ_BDCK01000050.1 Primary Assembly 53101 na BDCK01000051.1 unplaced-scaffold na na BDCK01000051.1 = NZ_BDCK01000051.1 Primary Assembly 51996 na BDCK01000052.1 unplaced-scaffold na na BDCK01000052.1 = NZ_BDCK01000052.1 Primary Assembly 51598 na BDCK01000053.1 unplaced-scaffold na na BDCK01000053.1 = NZ_BDCK01000053.1 Primary Assembly 49188 na BDCK01000054.1 unplaced-scaffold na na BDCK01000054.1 = NZ_BDCK01000054.1 Primary Assembly 47760 na BDCK01000055.1 unplaced-scaffold na na BDCK01000055.1 = NZ_BDCK01000055.1 Primary Assembly 44500 na BDCK01000056.1 unplaced-scaffold na na BDCK01000056.1 = NZ_BDCK01000056.1 Primary Assembly 42139 na BDCK01000057.1 unplaced-scaffold na na BDCK01000057.1 = NZ_BDCK01000057.1 Primary Assembly 38473 na BDCK01000058.1 unplaced-scaffold na na BDCK01000058.1 = NZ_BDCK01000058.1 Primary Assembly 34180 na BDCK01000059.1 unplaced-scaffold na na BDCK01000059.1 = NZ_BDCK01000059.1 Primary Assembly 32309 na BDCK01000060.1 unplaced-scaffold na na BDCK01000060.1 = NZ_BDCK01000060.1 Primary Assembly 31950 na BDCK01000061.1 unplaced-scaffold na na BDCK01000061.1 = NZ_BDCK01000061.1 Primary Assembly 28708 na BDCK01000062.1 unplaced-scaffold na na BDCK01000062.1 = NZ_BDCK01000062.1 Primary Assembly 20422 na BDCK01000063.1 unplaced-scaffold na na BDCK01000063.1 = NZ_BDCK01000063.1 Primary Assembly 19474 na BDCK01000064.1 unplaced-scaffold na na BDCK01000064.1 = NZ_BDCK01000064.1 Primary Assembly 17220 na BDCK01000065.1 unplaced-scaffold na na BDCK01000065.1 = NZ_BDCK01000065.1 Primary Assembly 9074 na BDCK01000066.1 unplaced-scaffold na na BDCK01000066.1 = NZ_BDCK01000066.1 Primary Assembly 11669 na BDCK01000067.1 unplaced-scaffold na na BDCK01000067.1 = NZ_BDCK01000067.1 Primary Assembly 9920 na BDCK01000068.1 unplaced-scaffold na na BDCK01000068.1 = NZ_BDCK01000068.1 Primary Assembly 9172 na BDCK01000069.1 unplaced-scaffold na na BDCK01000069.1 = NZ_BDCK01000069.1 Primary Assembly 8237 na BDCK01000070.1 unplaced-scaffold na na BDCK01000070.1 = NZ_BDCK01000070.1 Primary Assembly 7738 na BDCK01000071.1 unplaced-scaffold na na BDCK01000071.1 = NZ_BDCK01000071.1 Primary Assembly 6987 na BDCK01000072.1 unplaced-scaffold na na BDCK01000072.1 = NZ_BDCK01000072.1 Primary Assembly 6111 na BDCK01000073.1 unplaced-scaffold na na BDCK01000073.1 = NZ_BDCK01000073.1 Primary Assembly 5437 na BDCK01000074.1 unplaced-scaffold na na BDCK01000074.1 = NZ_BDCK01000074.1 Primary Assembly 4858 na BDCK01000075.1 unplaced-scaffold na na BDCK01000075.1 = NZ_BDCK01000075.1 Primary Assembly 2765 na BDCK01000076.1 unplaced-scaffold na na BDCK01000076.1 = NZ_BDCK01000076.1 Primary Assembly 2496 na BDCK01000077.1 unplaced-scaffold na na BDCK01000077.1 = NZ_BDCK01000077.1 Primary Assembly 2445 na BDCK01000078.1 unplaced-scaffold na na BDCK01000078.1 = NZ_BDCK01000078.1 Primary Assembly 2312 na BDCK01000079.1 unplaced-scaffold na na BDCK01000079.1 = NZ_BDCK01000079.1 Primary Assembly 1961 na BDCK01000080.1 unplaced-scaffold na na BDCK01000080.1 = NZ_BDCK01000080.1 Primary Assembly 1250 na BDCK01000081.1 unplaced-scaffold na na BDCK01000081.1 = NZ_BDCK01000081.1 Primary Assembly 547 na BDCK01000082.1 unplaced-scaffold na na BDCK01000082.1 = NZ_BDCK01000082.1 Primary Assembly 1426 na BDCK01000083.1 unplaced-scaffold na na BDCK01000083.1 = NZ_BDCK01000083.1 Primary Assembly 648 na BDCK01000084.1 unplaced-scaffold na na BDCK01000084.1 = NZ_BDCK01000084.1 Primary Assembly 1412 na BDCK01000085.1 unplaced-scaffold na na BDCK01000085.1 = NZ_BDCK01000085.1 Primary Assembly 644 na BDCK01000086.1 unplaced-scaffold na na BDCK01000086.1 = NZ_BDCK01000086.1 Primary Assembly 501 na BDCK01000087.1 unplaced-scaffold na na BDCK01000087.1 = NZ_BDCK01000087.1 Primary Assembly 503 na BDCK01000088.1 unplaced-scaffold na na BDCK01000088.1 = NZ_BDCK01000088.1 Primary Assembly 637 na BDCK01000089.1 unplaced-scaffold na na BDCK01000089.1 = NZ_BDCK01000089.1 Primary Assembly 1275 na BDCK01000090.1 unplaced-scaffold na na BDCK01000090.1 = NZ_BDCK01000090.1 Primary Assembly 1253 na BDCK01000091.1 unplaced-scaffold na na BDCK01000091.1 = NZ_BDCK01000091.1 Primary Assembly 1238 na BDCK01000092.1 unplaced-scaffold na na BDCK01000092.1 = NZ_BDCK01000092.1 Primary Assembly 1081 na BDCK01000093.1 unplaced-scaffold na na BDCK01000093.1 = NZ_BDCK01000093.1 Primary Assembly 1074 na BDCK01000094.1 unplaced-scaffold na na BDCK01000094.1 = NZ_BDCK01000094.1 Primary Assembly 1049 na BDCK01000095.1 unplaced-scaffold na na BDCK01000095.1 = NZ_BDCK01000095.1 Primary Assembly 1020 na BDCK01000096.1 unplaced-scaffold na na BDCK01000096.1 = NZ_BDCK01000096.1 Primary Assembly 929 na BDCK01000097.1 unplaced-scaffold na na BDCK01000097.1 = NZ_BDCK01000097.1 Primary Assembly 847 na BDCK01000098.1 unplaced-scaffold na na BDCK01000098.1 = NZ_BDCK01000098.1 Primary Assembly 836 na BDCK01000099.1 unplaced-scaffold na na BDCK01000099.1 = NZ_BDCK01000099.1 Primary Assembly 825 na BDCK01000100.1 unplaced-scaffold na na BDCK01000100.1 = NZ_BDCK01000100.1 Primary Assembly 794 na BDCK01000101.1 unplaced-scaffold na na BDCK01000101.1 = NZ_BDCK01000101.1 Primary Assembly 770 na BDCK01000102.1 unplaced-scaffold na na BDCK01000102.1 = NZ_BDCK01000102.1 Primary Assembly 746 na BDCK01000103.1 unplaced-scaffold na na BDCK01000103.1 = NZ_BDCK01000103.1 Primary Assembly 695 na BDCK01000104.1 unplaced-scaffold na na BDCK01000104.1 = NZ_BDCK01000104.1 Primary Assembly 670 na BDCK01000105.1 unplaced-scaffold na na BDCK01000105.1 = NZ_BDCK01000105.1 Primary Assembly 629 na