# Assembly name: X_couchianus-1.0 # Organism name: Xiphophorus couchianus (Monterrey platyfish) # Sex: female # Taxid: 32473 # BioSample: SAMN03922721 # BioProject: PRJNA290781 # Submitter: McDonnell Genome Institute - Washington University School of Medicine # Date: 2018-09-19 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: LNCC02 # Assembly method: HGAP v. 4 # Genome coverage: 77x # Sequencing technology: PacBio Sequel V2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_001444195.3 # RefSeq assembly accession: GCF_001444195.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001444205.3 GCF_001444205.1 Primary Assembly ## GCF_004104455.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chromosome_1 assembled-molecule 1 Chromosome CM010726.1 = NC_040228.1 Primary Assembly 24558797 na Chromosome_2 assembled-molecule 2 Chromosome CM010727.1 = NC_040229.1 Primary Assembly 34072901 na Chromosome_3 assembled-molecule 3 Chromosome CM010728.1 = NC_040230.1 Primary Assembly 24426224 na Chromosome_4 assembled-molecule 4 Chromosome CM010729.1 = NC_040231.1 Primary Assembly 36519261 na Chromosome_5 assembled-molecule 5 Chromosome CM010730.1 = NC_040232.1 Primary Assembly 41409857 na Chromosome_6 assembled-molecule 6 Chromosome CM010731.1 = NC_040233.1 Primary Assembly 31029881 na Chromosome_7 assembled-molecule 7 Chromosome CM010732.1 = NC_040234.1 Primary Assembly 37478395 na Chromosome_8 assembled-molecule 8 Chromosome CM010733.1 = NC_040235.1 Primary Assembly 28916419 na Chromosome_9 assembled-molecule 9 Chromosome CM010734.1 = NC_040236.1 Primary Assembly 33170924 na Chromosome_10 assembled-molecule 10 Chromosome CM010735.1 = NC_040237.1 Primary Assembly 17867001 na Chromosome_11 assembled-molecule 11 Chromosome CM010736.1 = NC_040238.1 Primary Assembly 32309742 na Chromosome_12 assembled-molecule 12 Chromosome CM010737.1 = NC_040239.1 Primary Assembly 32985844 na Chromosome_13 assembled-molecule 13 Chromosome CM010738.1 = NC_040240.1 Primary Assembly 30653514 na Chromosome_14 assembled-molecule 14 Chromosome CM010739.1 = NC_040241.1 Primary Assembly 25350836 na Chromosome_15 assembled-molecule 15 Chromosome CM010740.1 = NC_040242.1 Primary Assembly 24343664 na Chromosome_16 assembled-molecule 16 Chromosome CM010741.1 = NC_040243.1 Primary Assembly 20781335 na Chromosome_17 assembled-molecule 17 Chromosome CM010742.1 = NC_040244.1 Primary Assembly 18575743 na Chromosome_18 assembled-molecule 18 Chromosome CM010743.1 = NC_040245.1 Primary Assembly 32108030 na Chromosome_19 assembled-molecule 19 Chromosome CM010744.1 = NC_040246.1 Primary Assembly 24305965 na Chromosome_20 assembled-molecule 20 Chromosome CM010745.1 = NC_040247.1 Primary Assembly 30493861 na Chromosome_21 assembled-molecule 21 Chromosome CM010746.1 = NC_040248.1 Primary Assembly 23605160 na Chromosome_22 assembled-molecule 22 Chromosome CM010747.1 = NC_040249.1 Primary Assembly 30550352 na Chromosome_23 assembled-molecule 23 Chromosome CM010748.1 = NC_040250.1 Primary Assembly 29459928 na Chromosome_24 assembled-molecule 24 Chromosome CM010749.1 = NC_040251.1 Primary Assembly 20479106 na Scaffold01000045 unplaced-scaffold na na LNCC02000025.1 = NW_020963009.1 Primary Assembly 48697 na Scaffold01000055 unplaced-scaffold na na LNCC02000026.1 = NW_020963010.1 Primary Assembly 18905 na Scaffold01000080 unplaced-scaffold na na LNCC02000027.1 = NW_020963011.1 Primary Assembly 84337 na Scaffold01000087 unplaced-scaffold na na LNCC02000028.1 = NW_020963012.1 Primary Assembly 4718 na Scaffold01000100 unplaced-scaffold na na LNCC02000029.1 = NW_020963013.1 Primary Assembly 44565 na Scaffold1000101 unplaced-scaffold na na LNCC02000030.1 = NW_020963014.1 Primary Assembly 222209 na Scaffold1000102 unplaced-scaffold na na LNCC02000031.1 = NW_020963015.1 Primary Assembly 1787246 na Scaffold1000103 unplaced-scaffold na na LNCC02000032.1 = NW_020963016.1 Primary Assembly 386891 na Scaffold1000104 unplaced-scaffold na na LNCC02000033.1 = NW_020963017.1 Primary Assembly 1165 na Scaffold1000105 unplaced-scaffold na na LNCC02000034.1 = NW_020963018.1 Primary Assembly 24781 na Scaffold1000106 unplaced-scaffold na na LNCC02000035.1 = NW_020963019.1 Primary Assembly 4299 na Scaffold1000107 unplaced-scaffold na na LNCC02000036.1 = NW_020963020.1 Primary Assembly 24773 na Scaffold1000108 unplaced-scaffold na na LNCC02000037.1 = NW_020963021.1 Primary Assembly 10786 na Scaffold1000109 unplaced-scaffold na na LNCC02000038.1 = NW_020963022.1 Primary Assembly 2376 na Scaffold1000110 unplaced-scaffold na na LNCC02000039.1 = NW_020963023.1 Primary Assembly 13662 na Scaffold1000111 unplaced-scaffold na na LNCC02000040.1 = NW_020963024.1 Primary Assembly 26719 na Scaffold1000112 unplaced-scaffold na na LNCC02000041.1 = NW_020963025.1 Primary Assembly 24774 na Scaffold1000113 unplaced-scaffold na na LNCC02000042.1 = NW_020963026.1 Primary Assembly 14846 na Scaffold1000114 unplaced-scaffold na na LNCC02000043.1 = NW_020963027.1 Primary Assembly 25862 na Scaffold1000115 unplaced-scaffold na na LNCC02000044.1 = NW_020963028.1 Primary Assembly 2381 na Scaffold1000116 unplaced-scaffold na na LNCC02000045.1 = NW_020963029.1 Primary Assembly 32747 na Scaffold1000117 unplaced-scaffold na na LNCC02000046.1 = NW_020963030.1 Primary Assembly 3110 na Scaffold1000118 unplaced-scaffold na na LNCC02000047.1 = NW_020963031.1 Primary Assembly 6521 na Scaffold1000119 unplaced-scaffold na na LNCC02000048.1 = NW_020963032.1 Primary Assembly 10533 na Scaffold1000120 unplaced-scaffold na na LNCC02000049.1 = NW_020963033.1 Primary Assembly 1001 na Scaffold1000121 unplaced-scaffold na na LNCC02000050.1 = NW_020963034.1 Primary Assembly 30628 na Scaffold1000122 unplaced-scaffold na na LNCC02000051.1 = NW_020963035.1 Primary Assembly 9839 na Scaffold1000123 unplaced-scaffold na na LNCC02000052.1 = NW_020963036.1 Primary Assembly 12951 na Scaffold1000124 unplaced-scaffold na na LNCC02000053.1 = NW_020963037.1 Primary Assembly 24804 na Scaffold1000125 unplaced-scaffold na na LNCC02000054.1 = NW_020963038.1 Primary Assembly 1558 na Scaffold1000126 unplaced-scaffold na na LNCC02000055.1 = NW_020963039.1 Primary Assembly 24781 na Scaffold1000127 unplaced-scaffold na na LNCC02000056.1 = NW_020963040.1 Primary Assembly 22339 na Scaffold1000128 unplaced-scaffold na na LNCC02000057.1 = NW_020963041.1 Primary Assembly 5368 na Scaffold1000129 unplaced-scaffold na na LNCC02000058.1 = NW_020963042.1 Primary Assembly 38988 na Scaffold1000130 unplaced-scaffold na na LNCC02000059.1 = NW_020963043.1 Primary Assembly 1663 na Scaffold1000131 unplaced-scaffold na na LNCC02000060.1 = NW_020963044.1 Primary Assembly 3624 na Scaffold1000132 unplaced-scaffold na na LNCC02000061.1 = NW_020963045.1 Primary Assembly 24823 na Scaffold1000133 unplaced-scaffold na na LNCC02000062.1 = NW_020963046.1 Primary Assembly 8458 na Scaffold1000134 unplaced-scaffold na na LNCC02000063.1 = NW_020963047.1 Primary Assembly 5465 na Scaffold1000135 unplaced-scaffold na na LNCC02000064.1 = NW_020963048.1 Primary Assembly 20265 na Scaffold1000136 unplaced-scaffold na na LNCC02000065.1 = NW_020963049.1 Primary Assembly 745 na Scaffold1000137 unplaced-scaffold na na LNCC02000066.1 = NW_020963050.1 Primary Assembly 1069 na Scaffold1000138 unplaced-scaffold na na LNCC02000067.1 = NW_020963051.1 Primary Assembly 6859 na MT assembled-molecule MT Mitochondrion na <> NC_028083.1 non-nuclear 16638 na