# Assembly name: ASM143650v1 # Organism name: Loigolactobacillus rennini DSM 20253 (firmicutes) # Infraspecific name: strain=DSM 20253 # Taxid: 1423796 # BioSample: SAMN02369383 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AYYI01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001436505.1 # RefSeq assembly accession: GCF_001436505.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001436525.1 GCF_001436525.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1 unplaced-scaffold na na AYYI01000001.1 = NZ_AYYI01000001.1 Primary Assembly 32904 na NODE_2 unplaced-scaffold na na AYYI01000002.1 = NZ_AYYI01000002.1 Primary Assembly 18259 na NODE_3 unplaced-scaffold na na AYYI01000003.1 = NZ_AYYI01000003.1 Primary Assembly 61940 na NODE_4 unplaced-scaffold na na AYYI01000004.1 = NZ_AYYI01000004.1 Primary Assembly 14341 na NODE_5 unplaced-scaffold na na AYYI01000005.1 = NZ_AYYI01000005.1 Primary Assembly 101314 na NODE_6 unplaced-scaffold na na AYYI01000006.1 = NZ_AYYI01000006.1 Primary Assembly 43098 na NODE_7 unplaced-scaffold na na AYYI01000007.1 = NZ_AYYI01000007.1 Primary Assembly 56628 na NODE_8 unplaced-scaffold na na AYYI01000008.1 = NZ_AYYI01000008.1 Primary Assembly 1498 na NODE_9 unplaced-scaffold na na AYYI01000009.1 = NZ_AYYI01000009.1 Primary Assembly 33772 na NODE_10 unplaced-scaffold na na AYYI01000010.1 = NZ_AYYI01000010.1 Primary Assembly 59561 na NODE_11 unplaced-scaffold na na AYYI01000011.1 = NZ_AYYI01000011.1 Primary Assembly 5604 na NODE_12 unplaced-scaffold na na AYYI01000012.1 = NZ_AYYI01000012.1 Primary Assembly 1552 na NODE_13 unplaced-scaffold na na AYYI01000013.1 = NZ_AYYI01000013.1 Primary Assembly 2329 na NODE_14 unplaced-scaffold na na AYYI01000014.1 = NZ_AYYI01000014.1 Primary Assembly 15172 na NODE_15 unplaced-scaffold na na AYYI01000015.1 = NZ_AYYI01000015.1 Primary Assembly 74021 na NODE_16 unplaced-scaffold na na AYYI01000016.1 = NZ_AYYI01000016.1 Primary Assembly 32160 na NODE_17 unplaced-scaffold na na AYYI01000017.1 = NZ_AYYI01000017.1 Primary Assembly 38220 na NODE_18 unplaced-scaffold na na AYYI01000018.1 = NZ_AYYI01000018.1 Primary Assembly 35553 na NODE_19 unplaced-scaffold na na AYYI01000019.1 = NZ_AYYI01000019.1 Primary Assembly 3248 na NODE_20 unplaced-scaffold na na AYYI01000020.1 = NZ_AYYI01000020.1 Primary Assembly 24762 na NODE_21 unplaced-scaffold na na AYYI01000021.1 = NZ_AYYI01000021.1 Primary Assembly 85526 na NODE_23 unplaced-scaffold na na AYYI01000022.1 = NZ_AYYI01000022.1 Primary Assembly 67748 na NODE_24 unplaced-scaffold na na AYYI01000023.1 = NZ_AYYI01000023.1 Primary Assembly 49122 na NODE_25 unplaced-scaffold na na AYYI01000024.1 = NZ_AYYI01000024.1 Primary Assembly 1415 na NODE_26 unplaced-scaffold na na AYYI01000025.1 = NZ_AYYI01000025.1 Primary Assembly 23590 na NODE_27 unplaced-scaffold na na AYYI01000026.1 = NZ_AYYI01000026.1 Primary Assembly 52215 na NODE_28 unplaced-scaffold na na AYYI01000027.1 = NZ_AYYI01000027.1 Primary Assembly 44586 na NODE_29 unplaced-scaffold na na AYYI01000028.1 = NZ_AYYI01000028.1 Primary Assembly 1802 na NODE_30 unplaced-scaffold na na AYYI01000029.1 = NZ_AYYI01000029.1 Primary Assembly 19721 na NODE_31 unplaced-scaffold na na AYYI01000030.1 = NZ_AYYI01000030.1 Primary Assembly 41798 na NODE_32 unplaced-scaffold na na AYYI01000031.1 = NZ_AYYI01000031.1 Primary Assembly 7785 na NODE_33 unplaced-scaffold na na AYYI01000032.1 = NZ_AYYI01000032.1 Primary Assembly 60021 na NODE_34 unplaced-scaffold na na AYYI01000033.1 = NZ_AYYI01000033.1 Primary Assembly 17846 na NODE_35 unplaced-scaffold na na AYYI01000034.1 = NZ_AYYI01000034.1 Primary Assembly 36934 na NODE_36 unplaced-scaffold na na AYYI01000035.1 = NZ_AYYI01000035.1 Primary Assembly 18293 na NODE_37 unplaced-scaffold na na AYYI01000036.1 = NZ_AYYI01000036.1 Primary Assembly 34730 na NODE_38 unplaced-scaffold na na AYYI01000037.1 = NZ_AYYI01000037.1 Primary Assembly 9009 na NODE_39 unplaced-scaffold na na AYYI01000038.1 = NZ_AYYI01000038.1 Primary Assembly 105693 na NODE_41 unplaced-scaffold na na AYYI01000039.1 = NZ_AYYI01000039.1 Primary Assembly 12756 na NODE_42 unplaced-scaffold na na AYYI01000040.1 = NZ_AYYI01000040.1 Primary Assembly 38418 na NODE_43 unplaced-scaffold na na AYYI01000041.1 = NZ_AYYI01000041.1 Primary Assembly 1022 na NODE_44 unplaced-scaffold na na AYYI01000042.1 = NZ_AYYI01000042.1 Primary Assembly 55516 na NODE_45 unplaced-scaffold na na AYYI01000043.1 = NZ_AYYI01000043.1 Primary Assembly 4098 na NODE_46 unplaced-scaffold na na AYYI01000044.1 = NZ_AYYI01000044.1 Primary Assembly 43975 na NODE_47 unplaced-scaffold na na AYYI01000045.1 = NZ_AYYI01000045.1 Primary Assembly 571 na NODE_48 unplaced-scaffold na na AYYI01000046.1 = NZ_AYYI01000046.1 Primary Assembly 5487 na NODE_49 unplaced-scaffold na na AYYI01000047.1 = NZ_AYYI01000047.1 Primary Assembly 25382 na NODE_50 unplaced-scaffold na na AYYI01000048.1 = NZ_AYYI01000048.1 Primary Assembly 20539 na NODE_51 unplaced-scaffold na na AYYI01000049.1 = NZ_AYYI01000049.1 Primary Assembly 4023 na NODE_52 unplaced-scaffold na na AYYI01000050.1 = NZ_AYYI01000050.1 Primary Assembly 335 na NODE_53 unplaced-scaffold na na AYYI01000051.1 = NZ_AYYI01000051.1 Primary Assembly 26041 na NODE_54 unplaced-scaffold na na AYYI01000052.1 = NZ_AYYI01000052.1 Primary Assembly 11392 na NODE_55 unplaced-scaffold na na AYYI01000053.1 = NZ_AYYI01000053.1 Primary Assembly 6446 na NODE_57 unplaced-scaffold na na AYYI01000054.1 = NZ_AYYI01000054.1 Primary Assembly 1682 na NODE_61 unplaced-scaffold na na AYYI01000055.1 = NZ_AYYI01000055.1 Primary Assembly 6338 na NODE_62 unplaced-scaffold na na AYYI01000056.1 = NZ_AYYI01000056.1 Primary Assembly 4299 na NODE_63 unplaced-scaffold na na AYYI01000057.1 = NZ_AYYI01000057.1 Primary Assembly 4589 na NODE_64 unplaced-scaffold na na AYYI01000058.1 = NZ_AYYI01000058.1 Primary Assembly 7236 na NODE_65 unplaced-scaffold na na AYYI01000059.1 = NZ_AYYI01000059.1 Primary Assembly 11833 na NODE_66 unplaced-scaffold na na AYYI01000060.1 = NZ_AYYI01000060.1 Primary Assembly 4065 na NODE_67 unplaced-scaffold na na AYYI01000061.1 = NZ_AYYI01000061.1 Primary Assembly 40690 na NODE_70 unplaced-scaffold na na AYYI01000062.1 = NZ_AYYI01000062.1 Primary Assembly 17417 na NODE_72 unplaced-scaffold na na AYYI01000063.1 = NZ_AYYI01000063.1 Primary Assembly 18428 na NODE_74 unplaced-scaffold na na AYYI01000064.1 = NZ_AYYI01000064.1 Primary Assembly 6145 na NODE_75 unplaced-scaffold na na AYYI01000065.1 = NZ_AYYI01000065.1 Primary Assembly 18625 na NODE_76 unplaced-scaffold na na AYYI01000066.1 = NZ_AYYI01000066.1 Primary Assembly 9110 na NODE_77 unplaced-scaffold na na AYYI01000067.1 = NZ_AYYI01000067.1 Primary Assembly 1336 na NODE_78 unplaced-scaffold na na AYYI01000068.1 = NZ_AYYI01000068.1 Primary Assembly 39636 na NODE_79 unplaced-scaffold na na AYYI01000069.1 = NZ_AYYI01000069.1 Primary Assembly 206 na NODE_80 unplaced-scaffold na na AYYI01000070.1 = NZ_AYYI01000070.1 Primary Assembly 9084 na NODE_88 unplaced-scaffold na na AYYI01000071.1 = NZ_AYYI01000071.1 Primary Assembly 639 na NODE_89 unplaced-scaffold na na AYYI01000072.1 = NZ_AYYI01000072.1 Primary Assembly 7567 na NODE_90 unplaced-scaffold na na AYYI01000073.1 = NZ_AYYI01000073.1 Primary Assembly 205 na NODE_91 unplaced-scaffold na na AYYI01000074.1 = NZ_AYYI01000074.1 Primary Assembly 26973 na NODE_92 unplaced-scaffold na na AYYI01000075.1 = NZ_AYYI01000075.1 Primary Assembly 28154 na NODE_93 unplaced-scaffold na na AYYI01000076.1 = NZ_AYYI01000076.1 Primary Assembly 18525 na NODE_98 unplaced-scaffold na na AYYI01000077.1 = NZ_AYYI01000077.1 Primary Assembly 1817 na NODE_101 unplaced-scaffold na na AYYI01000078.1 = NZ_AYYI01000078.1 Primary Assembly 5798 na NODE_103 unplaced-scaffold na na AYYI01000079.1 = NZ_AYYI01000079.1 Primary Assembly 10000 na NODE_104 unplaced-scaffold na na AYYI01000080.1 = NZ_AYYI01000080.1 Primary Assembly 8200 na NODE_105 unplaced-scaffold na na AYYI01000081.1 = NZ_AYYI01000081.1 Primary Assembly 341 na NODE_107 unplaced-scaffold na na AYYI01000082.1 = NZ_AYYI01000082.1 Primary Assembly 31920 na NODE_108 unplaced-scaffold na na AYYI01000083.1 = NZ_AYYI01000083.1 Primary Assembly 315 na NODE_112 unplaced-scaffold na na AYYI01000084.1 = NZ_AYYI01000084.1 Primary Assembly 260 na NODE_120 unplaced-scaffold na na AYYI01000085.1 = NZ_AYYI01000085.1 Primary Assembly 3111 na NODE_121 unplaced-scaffold na na AYYI01000086.1 = NZ_AYYI01000086.1 Primary Assembly 421 na NODE_131 unplaced-scaffold na na AYYI01000087.1 = NZ_AYYI01000087.1 Primary Assembly 120082 na NODE_134 unplaced-scaffold na na AYYI01000088.1 = NZ_AYYI01000088.1 Primary Assembly 1074 na NODE_142 unplaced-scaffold na na AYYI01000089.1 = NZ_AYYI01000089.1 Primary Assembly 1880 na NODE_148 unplaced-scaffold na na AYYI01000090.1 = NZ_AYYI01000090.1 Primary Assembly 255 na NODE_152 unplaced-scaffold na na AYYI01000091.1 = NZ_AYYI01000091.1 Primary Assembly 407 na NODE_156 unplaced-scaffold na na AYYI01000092.1 = NZ_AYYI01000092.1 Primary Assembly 29865 na NODE_157 unplaced-scaffold na na AYYI01000093.1 = NZ_AYYI01000093.1 Primary Assembly 3180 na NODE_158 unplaced-scaffold na na AYYI01000094.1 = NZ_AYYI01000094.1 Primary Assembly 1703 na NODE_160 unplaced-scaffold na na AYYI01000095.1 = NZ_AYYI01000095.1 Primary Assembly 209 na NODE_165 unplaced-scaffold na na AYYI01000096.1 = NZ_AYYI01000096.1 Primary Assembly 5389 na NODE_174 unplaced-scaffold na na AYYI01000097.1 = NZ_AYYI01000097.1 Primary Assembly 881 na NODE_175 unplaced-scaffold na na AYYI01000098.1 = NZ_AYYI01000098.1 Primary Assembly 431 na NODE_188 unplaced-scaffold na na AYYI01000099.1 = NZ_AYYI01000099.1 Primary Assembly 11359 na NODE_190 unplaced-scaffold na na AYYI01000100.1 = NZ_AYYI01000100.1 Primary Assembly 1688 na NODE_199 unplaced-scaffold na na AYYI01000101.1 = NZ_AYYI01000101.1 Primary Assembly 431 na NODE_200 unplaced-scaffold na na AYYI01000102.1 = NZ_AYYI01000102.1 Primary Assembly 1042 na NODE_222 unplaced-scaffold na na AYYI01000103.1 = NZ_AYYI01000103.1 Primary Assembly 68247 na NODE_240 unplaced-scaffold na na AYYI01000104.1 = NZ_AYYI01000104.1 Primary Assembly 205 na NODE_259 unplaced-scaffold na na AYYI01000105.1 = NZ_AYYI01000105.1 Primary Assembly 63847 na NODE_262 unplaced-scaffold na na AYYI01000106.1 = NZ_AYYI01000106.1 Primary Assembly 22419 na