# Assembly name: ASM143440v1 # Organism name: Ligilactobacillus apodemi DSM 16634 = JCM 16172 (firmicutes) # Infraspecific name: strain=DSM 16634 # Taxid: 1423724 # BioSample: SAMN02369391 # BioProject: PRJNA222257 # Submitter: Shanghai Majorbio # Date: 2015-11-06 # Assembly type: na # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: AZFT01 # Assembly method: SOAPdenovo v. 2 # Expected final version: yes # Genome coverage: 100x # Sequencing technology: Illumina MiSeq; Illumina HiSeq # Relation to type material: assembly from type material # RefSeq category: Reference Genome # GenBank assembly accession: GCA_001434405.1 # RefSeq assembly accession: GCF_001434405.1 # RefSeq assembly and GenBank assemblies identical: yes # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001434415.1 GCF_001434415.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NODE_1 unplaced-scaffold na na AZFT01000001.1 = NZ_AZFT01000001.1 Primary Assembly 70933 na NODE_2 unplaced-scaffold na na AZFT01000002.1 = NZ_AZFT01000002.1 Primary Assembly 85100 na NODE_3 unplaced-scaffold na na AZFT01000003.1 = NZ_AZFT01000003.1 Primary Assembly 3241 na NODE_4 unplaced-scaffold na na AZFT01000004.1 = NZ_AZFT01000004.1 Primary Assembly 102066 na NODE_5 unplaced-scaffold na na AZFT01000005.1 = NZ_AZFT01000005.1 Primary Assembly 1636 na NODE_7 unplaced-scaffold na na AZFT01000006.1 = NZ_AZFT01000006.1 Primary Assembly 89283 na NODE_13 unplaced-scaffold na na AZFT01000007.1 = NZ_AZFT01000007.1 Primary Assembly 227 na NODE_14 unplaced-scaffold na na AZFT01000008.1 = NZ_AZFT01000008.1 Primary Assembly 293 na NODE_15 unplaced-scaffold na na AZFT01000009.1 = NZ_AZFT01000009.1 Primary Assembly 84593 na NODE_20 unplaced-scaffold na na AZFT01000010.1 = NZ_AZFT01000010.1 Primary Assembly 205 na NODE_30 unplaced-scaffold na na AZFT01000011.1 = NZ_AZFT01000011.1 Primary Assembly 365 na NODE_31 unplaced-scaffold na na AZFT01000012.1 = NZ_AZFT01000012.1 Primary Assembly 785 na NODE_32 unplaced-scaffold na na AZFT01000013.1 = NZ_AZFT01000013.1 Primary Assembly 224 na NODE_33 unplaced-scaffold na na AZFT01000014.1 = NZ_AZFT01000014.1 Primary Assembly 740 na NODE_37 unplaced-scaffold na na AZFT01000015.1 = NZ_AZFT01000015.1 Primary Assembly 398 na NODE_38 unplaced-scaffold na na AZFT01000016.1 = NZ_AZFT01000016.1 Primary Assembly 1838 na NODE_39 unplaced-scaffold na na AZFT01000017.1 = NZ_AZFT01000017.1 Primary Assembly 314 na NODE_40 unplaced-scaffold na na AZFT01000018.1 = NZ_AZFT01000018.1 Primary Assembly 14964 na NODE_51 unplaced-scaffold na na AZFT01000019.1 = NZ_AZFT01000019.1 Primary Assembly 227 na NODE_52 unplaced-scaffold na na AZFT01000020.1 = NZ_AZFT01000020.1 Primary Assembly 542 na NODE_57 unplaced-scaffold na na AZFT01000021.1 = NZ_AZFT01000021.1 Primary Assembly 338 na NODE_59 unplaced-scaffold na na AZFT01000022.1 = NZ_AZFT01000022.1 Primary Assembly 245 na NODE_69 unplaced-scaffold na na AZFT01000023.1 = NZ_AZFT01000023.1 Primary Assembly 338 na NODE_71 unplaced-scaffold na na AZFT01000024.1 = NZ_AZFT01000024.1 Primary Assembly 689 na NODE_73 unplaced-scaffold na na AZFT01000025.1 = NZ_AZFT01000025.1 Primary Assembly 19412 na NODE_79 unplaced-scaffold na na AZFT01000026.1 = NZ_AZFT01000026.1 Primary Assembly 209 na NODE_82 unplaced-scaffold na na AZFT01000027.1 = NZ_AZFT01000027.1 Primary Assembly 332 na NODE_88 unplaced-scaffold na na AZFT01000028.1 = NZ_AZFT01000028.1 Primary Assembly 2338 na NODE_89 unplaced-scaffold na na AZFT01000029.1 = NZ_AZFT01000029.1 Primary Assembly 3097 na NODE_91 unplaced-scaffold na na AZFT01000030.1 = NZ_AZFT01000030.1 Primary Assembly 81605 na NODE_95 unplaced-scaffold na na AZFT01000031.1 = NZ_AZFT01000031.1 Primary Assembly 67968 na NODE_96 unplaced-scaffold na na AZFT01000032.1 = NZ_AZFT01000032.1 Primary Assembly 271 na NODE_100 unplaced-scaffold na na AZFT01000033.1 = NZ_AZFT01000033.1 Primary Assembly 24414 na NODE_101 unplaced-scaffold na na AZFT01000034.1 = NZ_AZFT01000034.1 Primary Assembly 212 na NODE_104 unplaced-scaffold na na AZFT01000035.1 = NZ_AZFT01000035.1 Primary Assembly 746 na NODE_106 unplaced-scaffold na na AZFT01000036.1 = NZ_AZFT01000036.1 Primary Assembly 223 na NODE_108 unplaced-scaffold na na AZFT01000037.1 = NZ_AZFT01000037.1 Primary Assembly 233 na NODE_109 unplaced-scaffold na na AZFT01000038.1 = NZ_AZFT01000038.1 Primary Assembly 7905 na NODE_112 unplaced-scaffold na na AZFT01000039.1 = NZ_AZFT01000039.1 Primary Assembly 265 na NODE_117 unplaced-scaffold na na AZFT01000040.1 = NZ_AZFT01000040.1 Primary Assembly 43432 na NODE_119 unplaced-scaffold na na AZFT01000041.1 = NZ_AZFT01000041.1 Primary Assembly 258 na NODE_121 unplaced-scaffold na na AZFT01000042.1 = NZ_AZFT01000042.1 Primary Assembly 213 na NODE_122 unplaced-scaffold na na AZFT01000043.1 = NZ_AZFT01000043.1 Primary Assembly 104724 na NODE_126 unplaced-scaffold na na AZFT01000044.1 = NZ_AZFT01000044.1 Primary Assembly 206 na NODE_137 unplaced-scaffold na na AZFT01000045.1 = NZ_AZFT01000045.1 Primary Assembly 214 na NODE_140 unplaced-scaffold na na AZFT01000046.1 = NZ_AZFT01000046.1 Primary Assembly 262 na NODE_145 unplaced-scaffold na na AZFT01000047.1 = NZ_AZFT01000047.1 Primary Assembly 226 na NODE_147 unplaced-scaffold na na AZFT01000048.1 = NZ_AZFT01000048.1 Primary Assembly 164516 na NODE_167 unplaced-scaffold na na AZFT01000049.1 = NZ_AZFT01000049.1 Primary Assembly 67764 na NODE_171 unplaced-scaffold na na AZFT01000050.1 = NZ_AZFT01000050.1 Primary Assembly 30148 na NODE_181 unplaced-scaffold na na AZFT01000051.1 = NZ_AZFT01000051.1 Primary Assembly 1276 na NODE_183 unplaced-scaffold na na AZFT01000052.1 = NZ_AZFT01000052.1 Primary Assembly 263 na NODE_187 unplaced-scaffold na na AZFT01000053.1 = NZ_AZFT01000053.1 Primary Assembly 999215 na NODE_188 unplaced-scaffold na na AZFT01000054.1 = NZ_AZFT01000054.1 Primary Assembly 9650 na