# Assembly name: IRGSP-1.0 # Description: Os-Nipponbare-Reference-IRGSP-1.0 # Organism name: Oryza sativa Japonica Group (Japanese rice) # Infraspecific name: cultivar=Nipponbare # Taxid: 39947 # BioSample: SAMD00000397 # BioProject: PRJDB1747 # Submitter: National Institute of Agrobiological Sciences # Date: 2015-10-10 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # RefSeq category: Representative Genome # GenBank assembly accession: GCA_001433935.1 # RefSeq assembly accession: GCF_001433935.1 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_001433945.1 GCF_001433945.1 Primary Assembly ## GCF_000123075.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 1 assembled-molecule 1 Chromosome AP014957.1 = NC_029256.1 Primary Assembly 43270923 na 2 assembled-molecule 2 Chromosome AP014958.1 = NC_029257.1 Primary Assembly 35937250 na 3 assembled-molecule 3 Chromosome AP014959.1 = NC_029258.1 Primary Assembly 36413819 na 4 assembled-molecule 4 Chromosome AP014960.1 = NC_029259.1 Primary Assembly 35502694 na 5 assembled-molecule 5 Chromosome AP014961.1 = NC_029260.1 Primary Assembly 29958434 na 6 assembled-molecule 6 Chromosome AP014962.1 = NC_029261.1 Primary Assembly 31248787 na 7 assembled-molecule 7 Chromosome AP014963.1 = NC_029262.1 Primary Assembly 29697621 na 8 assembled-molecule 8 Chromosome AP014964.1 = NC_029263.1 Primary Assembly 28443022 na 9 assembled-molecule 9 Chromosome AP014965.1 = NC_029264.1 Primary Assembly 23012720 na 10 assembled-molecule 10 Chromosome AP014966.1 = NC_029265.1 Primary Assembly 23207287 na 11 assembled-molecule 11 Chromosome AP014967.1 = NC_029266.1 Primary Assembly 29021106 na 12 assembled-molecule 12 Chromosome AP014968.1 = NC_029267.1 Primary Assembly 27531856 na Syng_TIGR_002 unplaced-scaffold na na AP014969.1 = NW_015379228.1 Primary Assembly 14476 na Syng_TIGR_004 unplaced-scaffold na na AP014970.1 = NW_015379227.1 Primary Assembly 19457 na Syng_TIGR_005 unplaced-scaffold na na AP014971.1 = NW_015379226.1 Primary Assembly 21787 na Syng_TIGR_007 unplaced-scaffold na na AP014972.1 = NW_015379225.1 Primary Assembly 7820 na Syng_TIGR_008 unplaced-scaffold na na AP014973.1 = NW_015379224.1 Primary Assembly 16676 na Syng_TIGR_009 unplaced-scaffold na na AP014974.1 = NW_015379223.1 Primary Assembly 10296 na Syng_TIGR_010 unplaced-scaffold na na AP014975.1 = NW_015379222.1 Primary Assembly 15493 na Syng_TIGR_011 unplaced-scaffold na na AP014976.1 = NW_015379221.1 Primary Assembly 10901 na Syng_TIGR_012 unplaced-scaffold na na AP014977.1 = NW_015379220.1 Primary Assembly 16417 na Syng_TIGR_013 unplaced-scaffold na na AP014978.1 = NW_015379219.1 Primary Assembly 10512 na Syng_TIGR_014 unplaced-scaffold na na AP014979.1 = NW_015379218.1 Primary Assembly 21421 na Syng_TIGR_015 unplaced-scaffold na na AP014980.1 = NW_015379217.1 Primary Assembly 10595 na Syng_TIGR_016 unplaced-scaffold na na AP014981.1 = NW_015379216.1 Primary Assembly 12792 na Syng_TIGR_019 unplaced-scaffold na na AP014982.1 = NW_015379215.1 Primary Assembly 10422 na Syng_TIGR_020 unplaced-scaffold na na AP014983.1 = NW_015379214.1 Primary Assembly 10699 na Syng_TIGR_021 unplaced-scaffold na na AP014984.1 = NW_015379213.1 Primary Assembly 17477 na Syng_TIGR_022 unplaced-scaffold na na AP014985.1 = NW_015379212.1 Primary Assembly 9889 na Syng_TIGR_023 unplaced-scaffold na na AP014986.1 = NW_015379211.1 Primary Assembly 24772 na Syng_TIGR_024 unplaced-scaffold na na AP014987.1 = NW_015379210.1 Primary Assembly 10060 na Syng_TIGR_026 unplaced-scaffold na na AP014988.1 = NW_015379209.1 Primary Assembly 19971 na Syng_TIGR_027 unplaced-scaffold na na AP014989.1 = NW_015379208.1 Primary Assembly 11522 na Syng_TIGR_028 unplaced-scaffold na na AP014990.1 = NW_015379207.1 Primary Assembly 31094 na Syng_TIGR_029 unplaced-scaffold na na AP014991.1 = NW_015379206.1 Primary Assembly 12884 na Syng_TIGR_030 unplaced-scaffold na na AP014992.1 = NW_015379205.1 Primary Assembly 10794 na Syng_TIGR_031 unplaced-scaffold na na AP014993.1 = NW_015379204.1 Primary Assembly 9548 na Syng_TIGR_032 unplaced-scaffold na na AP014994.1 = NW_015379203.1 Primary Assembly 9603 na Syng_TIGR_033 unplaced-scaffold na na AP014995.1 = NW_015379202.1 Primary Assembly 11093 na Syng_TIGR_034 unplaced-scaffold na na AP014996.1 = NW_015379201.1 Primary Assembly 10311 na Syng_TIGR_035 unplaced-scaffold na na AP014997.1 = NW_015379200.1 Primary Assembly 10686 na Syng_TIGR_036 unplaced-scaffold na na AP014998.1 = NW_015379199.1 Primary Assembly 10434 na Syng_TIGR_037 unplaced-scaffold na na AP014999.1 = NW_015379198.1 Primary Assembly 13061 na Syng_TIGR_038 unplaced-scaffold na na AP015000.1 = NW_015379197.1 Primary Assembly 8197 na Syng_TIGR_039 unplaced-scaffold na na AP015001.1 = NW_015379196.1 Primary Assembly 6269 na Syng_TIGR_041 unplaced-scaffold na na AP015002.1 = NW_015379195.1 Primary Assembly 10210 na Syng_TIGR_042 unplaced-scaffold na na AP015003.1 = NW_015379194.1 Primary Assembly 5510 na Syng_TIGR_043 unplaced-scaffold na na AP015004.1 = NW_015379193.1 Primary Assembly 4236 na Syng_TIGR_044 unplaced-scaffold na na AP015005.1 = NW_015379192.1 Primary Assembly 6000 na Syng_TIGR_045 unplaced-scaffold na na AP015006.1 = NW_015379191.1 Primary Assembly 22545 na Syng_TIGR_046 unplaced-scaffold na na AP015007.1 = NW_015379190.1 Primary Assembly 11447 na Syng_TIGR_047 unplaced-scaffold na na AP015008.1 = NW_015379189.1 Primary Assembly 20829 na Syng_TIGR_048 unplaced-scaffold na na AP015009.1 = NW_015379188.1 Primary Assembly 7140 na Syng_TIGR_049 unplaced-scaffold na na AP015010.1 = NW_015379187.1 Primary Assembly 6261 na Syng_TIGR_050 unplaced-scaffold na na AP015011.1 = NW_015379186.1 Primary Assembly 8529 na MT assembled-molecule MT Mitochondrion na <> NC_011033.1 non-nuclear 490520 na Pltd assembled-molecule Pltd Chloroplast na <> NC_001320.1 non-nuclear 134525 na B1 assembled-molecule B1 Mitochondrial Plasmid na <> NC_001751.1 non-nuclear 2135 na