# Assembly name: Cucumber_9930_V3 # Organism name: Cucumis sativus (cucumber) # Infraspecific name: cultivar=9930 # Taxid: 3659 # BioSample: SAMN02953750 # BioProject: PRJNA33619 # Submitter: The Cucumber Genome Initiative # Date: 2019-11-15 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: ACHR03 # Assembly method: Celera Assembler v. 1.8; FALCON v. 0.3 # Expected final version: no # Genome coverage: 50.0x # Sequencing technology: PacBio RSII; PacBio Sequel; 10X Genomics; Hi-C; Illumina # RefSeq category: Representative Genome # GenBank assembly accession: GCA_000004075.3 # RefSeq assembly accession: GCF_000004075.3 # RefSeq assembly and GenBank assemblies identical: no # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_000004085.3 GCF_000004085.3 Primary Assembly ## GCF_000102095.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome CM002922.2 = NC_026655.2 Primary Assembly 32926272 na chr2 assembled-molecule 2 Chromosome CM002923.2 = NC_026656.2 Primary Assembly 24837039 na chr3 assembled-molecule 3 Chromosome CM002924.2 = NC_026657.2 Primary Assembly 40877379 na chr4 assembled-molecule 4 Chromosome CM002925.2 = NC_026658.2 Primary Assembly 26827763 na chr5 assembled-molecule 5 Chromosome CM002926.2 = NC_026659.2 Primary Assembly 31913682 na chr6 assembled-molecule 6 Chromosome CM002927.2 = NC_026660.2 Primary Assembly 31125843 na chr7 assembled-molecule 7 Chromosome CM002928.2 = NC_026661.2 Primary Assembly 22466726 na scaffold132 unplaced-scaffold na na ACHR03000001.1 = NW_022279534.1 Primary Assembly 91793 na scaffold93 unplaced-scaffold na na ACHR03000002.1 = NW_022279582.1 Primary Assembly 160002 na scaffold70 unplaced-scaffold na na ACHR03000003.1 = NW_022279562.1 Primary Assembly 194636 na scaffold99 unplaced-scaffold na na ACHR03000004.1 = NW_022279586.1 Primary Assembly 143614 na scaffold137 unplaced-scaffold na na ACHR03000005.1 = NW_022279538.1 Primary Assembly 53931 na scaffold78 unplaced-scaffold na na ACHR03000007.1 = NW_022279569.1 Primary Assembly 175020 na scaffold79 unplaced-scaffold na na ACHR03000008.1 = NW_022279570.1 Primary Assembly 174987 na scaffold118 unplaced-scaffold na na ACHR03000009.1 = NW_022279524.1 Primary Assembly 115022 na scaffold67 unplaced-scaffold na na ACHR03000010.1 = NW_022279560.1 Primary Assembly 217548 na scaffold87 unplaced-scaffold na na ACHR03000011.1 = NW_022279578.1 Primary Assembly 162647 na scaffold139 unplaced-scaffold na na ACHR03000012.1 = NW_022279540.1 Primary Assembly 47384 na scaffold117 unplaced-scaffold na na ACHR03000013.1 = NW_022279523.1 Primary Assembly 115457 na scaffold54 unplaced-scaffold na na ACHR03000015.1 = NW_022279554.1 Primary Assembly 445576 na scaffold126 unplaced-scaffold na na ACHR03000016.1 = NW_022279530.1 Primary Assembly 100432 na scaffold142 unplaced-scaffold na na ACHR03000017.1 = NW_022279543.1 Primary Assembly 30868 na scaffold84 unplaced-scaffold na na ACHR03000018.1 = NW_022279575.1 Primary Assembly 170109 na scaffold120 unplaced-scaffold na na ACHR03000019.1 = NW_022279526.1 Primary Assembly 111580 na scaffold145 unplaced-scaffold na na ACHR03000020.1 = NW_022279545.1 Primary Assembly 5476 na scaffold63 unplaced-scaffold na na ACHR03000021.1 = NW_022279557.1 Primary Assembly 245606 na scaffold80 unplaced-scaffold na na ACHR03000022.1 = NW_022279571.1 Primary Assembly 169004 na scaffold82 unplaced-scaffold na na ACHR03000023.1 = NW_022279573.1 Primary Assembly 168391 na scaffold90 unplaced-scaffold na na ACHR03000024.1 = NW_022279579.1 Primary Assembly 160015 na scaffold75 unplaced-scaffold na na ACHR03000025.1 = NW_022279566.1 Primary Assembly 175228 na scaffold86 unplaced-scaffold na na ACHR03000026.1 = NW_022279577.1 Primary Assembly 180766 na scaffold140 unplaced-scaffold na na ACHR03000027.1 = NW_022279541.1 Primary Assembly 51121 na scaffold141 unplaced-scaffold na na ACHR03000029.1 = NW_022279542.1 Primary Assembly 31800 na scaffold72 unplaced-scaffold na na ACHR03000030.1 = NW_022279564.1 Primary Assembly 190030 na scaffold94 unplaced-scaffold na na ACHR03000031.1 = NW_022279583.1 Primary Assembly 159972 na scaffold127 unplaced-scaffold na na ACHR03000032.1 = NW_022279531.1 Primary Assembly 100001 na scaffold143 unplaced-scaffold na na ACHR03000033.1 = NW_022279544.1 Primary Assembly 29348 na scaffold134 unplaced-scaffold na na ACHR03000034.1 = NW_022279536.1 Primary Assembly 71808 na scaffold108 unplaced-scaffold na na ACHR03000035.1 = NW_022279515.1 Primary Assembly 133075 na scaffold122 unplaced-scaffold na na ACHR03000036.1 = NW_022279527.1 Primary Assembly 107957 na scaffold95 unplaced-scaffold na na ACHR03000037.1 = NW_022279584.1 Primary Assembly 154364 na scaffold85 unplaced-scaffold na na ACHR03000038.1 = NW_022279576.1 Primary Assembly 166175 na scaffold46 unplaced-scaffold na na ACHR03000039.1 = NW_022279550.1 Primary Assembly 363065 na scaffold104 unplaced-scaffold na na ACHR03000040.1 = NW_022279512.1 Primary Assembly 139185 na scaffold112 unplaced-scaffold na na ACHR03000041.1 = NW_022279518.1 Primary Assembly 129945 na scaffold31 unplaced-scaffold na na ACHR03000042.1 = NW_022279546.1 Primary Assembly 898249 na scaffold128 unplaced-scaffold na na ACHR03000043.1 = NW_022279532.1 Primary Assembly 99998 na scaffold138 unplaced-scaffold na na ACHR03000044.1 = NW_022279539.1 Primary Assembly 49296 na scaffold92 unplaced-scaffold na na ACHR03000045.1 = NW_022279581.1 Primary Assembly 160003 na scaffold73 unplaced-scaffold na na ACHR03000046.1 = NW_022279565.1 Primary Assembly 181498 na scaffold125 unplaced-scaffold na na ACHR03000047.1 = NW_022279529.1 Primary Assembly 100791 na scaffold110 unplaced-scaffold na na ACHR03000048.1 = NW_022279517.1 Primary Assembly 129950 na scaffold136 unplaced-scaffold na na ACHR03000049.1 = NW_022279537.1 Primary Assembly 57890 na scaffold91 unplaced-scaffold na na ACHR03000051.1 = NW_022279580.1 Primary Assembly 260018 na scaffold83 unplaced-scaffold na na ACHR03000052.1 = NW_022279574.1 Primary Assembly 168119 na scaffold133 unplaced-scaffold na na ACHR03000053.1 = NW_022279535.1 Primary Assembly 90406 na scaffold114 unplaced-scaffold na na ACHR03000054.1 = NW_022279520.1 Primary Assembly 127599 na scaffold77 unplaced-scaffold na na ACHR03000055.1 = NW_022279568.1 Primary Assembly 175164 na scaffold53 unplaced-scaffold na na ACHR03000056.1 = NW_022279553.1 Primary Assembly 312564 na scaffold97 unplaced-scaffold na na ACHR03000057.1 = NW_022279585.1 Primary Assembly 146456 na scaffold100 unplaced-scaffold na na ACHR03000059.1 = NW_022279510.1 Primary Assembly 143075 na scaffold119 unplaced-scaffold na na ACHR03000060.1 = NW_022279525.1 Primary Assembly 112281 na scaffold71 unplaced-scaffold na na ACHR03000061.1 = NW_022279563.1 Primary Assembly 193784 na scaffold81 unplaced-scaffold na na ACHR03000063.1 = NW_022279572.1 Primary Assembly 168909 na scaffold107 unplaced-scaffold na na ACHR03000064.1 = NW_022279514.1 Primary Assembly 137813 na scaffold41 unplaced-scaffold na na ACHR03000065.1 = NW_022279549.1 Primary Assembly 470089 na scaffold69 unplaced-scaffold na na ACHR03000066.1 = NW_022279561.1 Primary Assembly 208472 na scaffold115 unplaced-scaffold na na ACHR03000067.1 = NW_022279521.1 Primary Assembly 125622 na scaffold38 unplaced-scaffold na na ACHR03000068.1 = NW_022279547.1 Primary Assembly 508943 na scaffold124 unplaced-scaffold na na ACHR03000069.1 = NW_022279528.1 Primary Assembly 101636 na scaffold103 unplaced-scaffold na na ACHR03000070.1 = NW_022279511.1 Primary Assembly 146841 na scaffold113 unplaced-scaffold na na ACHR03000071.1 = NW_022279519.1 Primary Assembly 129904 na scaffold109 unplaced-scaffold na na ACHR03000072.1 = NW_022279516.1 Primary Assembly 130278 na scaffold40 unplaced-scaffold na na ACHR03000073.1 = NW_022279548.1 Primary Assembly 474992 na scaffold64 unplaced-scaffold na na ACHR03000074.1 = NW_022279558.1 Primary Assembly 240083 na scaffold47 unplaced-scaffold na na ACHR03000075.1 = NW_022279551.1 Primary Assembly 341446 na scaffold66 unplaced-scaffold na na ACHR03000076.1 = NW_022279559.1 Primary Assembly 410025 na scaffold61 unplaced-scaffold na na ACHR03000077.1 = NW_022279556.1 Primary Assembly 257883 na scaffold52 unplaced-scaffold na na ACHR03000078.1 = NW_022279552.1 Primary Assembly 319892 na scaffold76 unplaced-scaffold na na ACHR03000079.1 = NW_022279567.1 Primary Assembly 175175 na scaffold106 unplaced-scaffold na na ACHR03000080.1 = NW_022279513.1 Primary Assembly 138203 na scaffold58 unplaced-scaffold na na ACHR03000081.1 = NW_022279555.1 Primary Assembly 270192 na scaffold116 unplaced-scaffold na na ACHR03000082.1 = NW_022279522.1 Primary Assembly 125170 na scaffold131 unplaced-scaffold na na ACHR03000084.1 = NW_022279533.1 Primary Assembly 94730 na 1 assembled-molecule 1 Mitochondrion na <> NC_016005.1 non-nuclear 1555935 na 2 assembled-molecule 2 Mitochondrion na <> NC_016004.1 non-nuclear 83817 na 3 assembled-molecule 3 Mitochondrion na <> NC_016006.1 non-nuclear 44840 na Pltd assembled-molecule Pltd Chloroplast na <> NC_007144.1 non-nuclear 155293 na