# Assembly name: mPhoVit2.hap1.1 # Organism name: Phoca vitulina (harbor seal) # Taxid: 9720 # BioSample: SAMEA120960980 # BioProject: PRJEB124502 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-09-14 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CGBKWX01 # Assembly method: various # Genome coverage: 40x # Sequencing technology: PacBio,Arima2 # GenBank assembly accession: GCA_988265205.1 # Linked assembly: GCA_988265215.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1_HAP1 assembled-molecule 1 Chromosome OZ555624.1 <> na Primary Assembly 216824701 na SUPER_2_HAP1 assembled-molecule 2 Chromosome OZ555625.1 <> na Primary Assembly 211820020 na SUPER_3_HAP1 assembled-molecule 3 Chromosome OZ555626.1 <> na Primary Assembly 208073714 na SUPER_4_HAP1 assembled-molecule 4 Chromosome OZ555627.1 <> na Primary Assembly 194800166 na SUPER_5_HAP1 assembled-molecule 5 Chromosome OZ555628.1 <> na Primary Assembly 188877887 na SUPER_6_HAP1 assembled-molecule 6 Chromosome OZ555629.1 <> na Primary Assembly 183487605 na SUPER_7_HAP1 assembled-molecule 7 Chromosome OZ555630.1 <> na Primary Assembly 155348159 na SUPER_8_HAP1 assembled-molecule 8 Chromosome OZ555631.1 <> na Primary Assembly 146516223 na SUPER_9_HAP1 assembled-molecule 9 Chromosome OZ555632.1 <> na Primary Assembly 145800998 na SUPER_10_HAP1 assembled-molecule 10 Chromosome OZ555633.1 <> na Primary Assembly 139021524 na SUPER_11_HAP1 assembled-molecule 11 Chromosome OZ555634.1 <> na Primary Assembly 110656701 na SUPER_12_HAP1 assembled-molecule 12 Chromosome OZ555635.1 <> na Primary Assembly 105728905 na SUPER_13_HAP1 assembled-molecule 13 Chromosome OZ555636.1 <> na Primary Assembly 94298519 na SUPER_14_HAP1 assembled-molecule 14 Chromosome OZ555637.1 <> na Primary Assembly 93764544 na SUPER_15_HAP1 assembled-molecule 15 Chromosome OZ555638.1 <> na Primary Assembly 63107655 na SUPER_X_HAP1 assembled-molecule X Chromosome OZ555639.1 <> na Primary Assembly 132471283 na SUPER_Y_HAP1 assembled-molecule Y Chromosome OZ555640.1 <> na Primary Assembly 19666741 na HAP1_SCAFFOLD_21 unplaced-scaffold na na CGBKWX010000001.1 <> na Primary Assembly 2484873 na HAP1_SCAFFOLD_22 unplaced-scaffold na na CGBKWX010000002.1 <> na Primary Assembly 2255369 na HAP1_SCAFFOLD_24 unplaced-scaffold na na CGBKWX010000003.1 <> na Primary Assembly 1513531 na HAP1_SCAFFOLD_25 unplaced-scaffold na na CGBKWX010000004.1 <> na Primary Assembly 1314674 na HAP1_SCAFFOLD_27 unplaced-scaffold na na CGBKWX010000005.1 <> na Primary Assembly 1204507 na HAP1_SCAFFOLD_28 unplaced-scaffold na na CGBKWX010000006.1 <> na Primary Assembly 987486 na HAP1_SCAFFOLD_29 unplaced-scaffold na na CGBKWX010000007.1 <> na Primary Assembly 939806 na HAP1_SCAFFOLD_30 unplaced-scaffold na na CGBKWX010000008.1 <> na Primary Assembly 774607 na HAP1_SCAFFOLD_31 unplaced-scaffold na na CGBKWX010000009.1 <> na Primary Assembly 772773 na HAP1_SCAFFOLD_32 unplaced-scaffold na na CGBKWX010000010.1 <> na Primary Assembly 746486 na HAP1_SCAFFOLD_33 unplaced-scaffold na na CGBKWX010000011.1 <> na Primary Assembly 680877 na HAP1_SCAFFOLD_34 unplaced-scaffold na na CGBKWX010000012.1 <> na Primary Assembly 679542 na HAP1_SCAFFOLD_35 unplaced-scaffold na na CGBKWX010000013.1 <> na Primary Assembly 643767 na HAP1_SCAFFOLD_36 unplaced-scaffold na na CGBKWX010000014.1 <> na Primary Assembly 611973 na HAP1_SCAFFOLD_37 unplaced-scaffold na na CGBKWX010000015.1 <> na Primary Assembly 599773 na HAP1_SCAFFOLD_38 unplaced-scaffold na na CGBKWX010000016.1 <> na Primary Assembly 589658 na HAP1_SCAFFOLD_39 unplaced-scaffold na na CGBKWX010000017.1 <> na Primary Assembly 580208 na HAP1_SCAFFOLD_40 unplaced-scaffold na na CGBKWX010000018.1 <> na Primary Assembly 537907 na HAP1_SCAFFOLD_41 unplaced-scaffold na na CGBKWX010000019.1 <> na Primary Assembly 508093 na HAP1_SCAFFOLD_42 unplaced-scaffold na na CGBKWX010000020.1 <> na Primary Assembly 471881 na HAP1_SCAFFOLD_43 unplaced-scaffold na na CGBKWX010000021.1 <> na Primary Assembly 443289 na HAP1_SCAFFOLD_45 unplaced-scaffold na na CGBKWX010000022.1 <> na Primary Assembly 417663 na HAP1_SCAFFOLD_46 unplaced-scaffold na na CGBKWX010000023.1 <> na Primary Assembly 398237 na HAP1_SCAFFOLD_47 unplaced-scaffold na na CGBKWX010000024.1 <> na Primary Assembly 391019 na HAP1_SCAFFOLD_48 unplaced-scaffold na na CGBKWX010000025.1 <> na Primary Assembly 387966 na HAP1_SCAFFOLD_49 unplaced-scaffold na na CGBKWX010000026.1 <> na Primary Assembly 371435 na HAP1_SCAFFOLD_50 unplaced-scaffold na na CGBKWX010000027.1 <> na Primary Assembly 365578 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CGBKWX010000028.1 <> na Primary Assembly 360875 na HAP1_SCAFFOLD_52 unplaced-scaffold na na CGBKWX010000029.1 <> na Primary Assembly 345877 na HAP1_SCAFFOLD_53 unplaced-scaffold na na CGBKWX010000030.1 <> na Primary Assembly 322864 na HAP1_SCAFFOLD_54 unplaced-scaffold na na CGBKWX010000031.1 <> na Primary Assembly 315104 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CGBKWX010000032.1 <> na Primary Assembly 295647 na HAP1_SCAFFOLD_56 unplaced-scaffold na na CGBKWX010000033.1 <> na Primary Assembly 294570 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CGBKWX010000034.1 <> na Primary Assembly 281755 na HAP1_SCAFFOLD_58 unplaced-scaffold na na CGBKWX010000035.1 <> na Primary Assembly 270458 na HAP1_SCAFFOLD_59 unplaced-scaffold na na CGBKWX010000036.1 <> na Primary Assembly 268279 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CGBKWX010000037.1 <> na Primary Assembly 267736 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CGBKWX010000038.1 <> na Primary Assembly 255667 na HAP1_SCAFFOLD_62 unplaced-scaffold na na CGBKWX010000039.1 <> na Primary Assembly 245192 na HAP1_SCAFFOLD_63 unplaced-scaffold na na CGBKWX010000040.1 <> na Primary Assembly 244962 na HAP1_SCAFFOLD_64 unplaced-scaffold na na CGBKWX010000041.1 <> na Primary Assembly 244555 na HAP1_SCAFFOLD_65 unplaced-scaffold na na CGBKWX010000042.1 <> na Primary Assembly 223396 na HAP1_SCAFFOLD_66 unplaced-scaffold na na CGBKWX010000043.1 <> na Primary Assembly 221407 na HAP1_SCAFFOLD_67 unplaced-scaffold na na CGBKWX010000044.1 <> na Primary Assembly 218422 na HAP1_SCAFFOLD_68 unplaced-scaffold na na CGBKWX010000045.1 <> na Primary Assembly 206459 na HAP1_SCAFFOLD_70 unplaced-scaffold na na CGBKWX010000046.1 <> na Primary Assembly 195523 na HAP1_SCAFFOLD_71 unplaced-scaffold na na CGBKWX010000047.1 <> na Primary Assembly 192599 na HAP1_SCAFFOLD_72 unplaced-scaffold na na CGBKWX010000048.1 <> na Primary Assembly 182257 na HAP1_SCAFFOLD_73 unplaced-scaffold na na CGBKWX010000049.1 <> na Primary Assembly 174204 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CGBKWX010000050.1 <> na Primary Assembly 169531 na HAP1_SCAFFOLD_75 unplaced-scaffold na na CGBKWX010000051.1 <> na Primary Assembly 164579 na HAP1_SCAFFOLD_76 unplaced-scaffold na na CGBKWX010000052.1 <> na Primary Assembly 162404 na HAP1_SCAFFOLD_77 unplaced-scaffold na na CGBKWX010000053.1 <> na Primary Assembly 161255 na HAP1_SCAFFOLD_78 unplaced-scaffold na na CGBKWX010000054.1 <> na Primary Assembly 156533 na HAP1_SCAFFOLD_79 unplaced-scaffold na na CGBKWX010000055.1 <> na Primary Assembly 152179 na HAP1_SCAFFOLD_80 unplaced-scaffold na na CGBKWX010000056.1 <> na Primary Assembly 151774 na HAP1_SCAFFOLD_81 unplaced-scaffold na na CGBKWX010000057.1 <> na Primary Assembly 147933 na HAP1_SCAFFOLD_82 unplaced-scaffold na na CGBKWX010000058.1 <> na Primary Assembly 145690 na HAP1_SCAFFOLD_83 unplaced-scaffold na na CGBKWX010000059.1 <> na Primary Assembly 144517 na HAP1_SCAFFOLD_84 unplaced-scaffold na na CGBKWX010000060.1 <> na Primary Assembly 142324 na HAP1_SCAFFOLD_85 unplaced-scaffold na na CGBKWX010000061.1 <> na Primary Assembly 141259 na HAP1_SCAFFOLD_86 unplaced-scaffold na na CGBKWX010000062.1 <> na Primary Assembly 137683 na HAP1_SCAFFOLD_87 unplaced-scaffold na na CGBKWX010000063.1 <> na Primary Assembly 135841 na HAP1_SCAFFOLD_88 unplaced-scaffold na na CGBKWX010000064.1 <> na Primary Assembly 133147 na HAP1_SCAFFOLD_89 unplaced-scaffold na na CGBKWX010000065.1 <> na Primary Assembly 132516 na HAP1_SCAFFOLD_90 unplaced-scaffold na na CGBKWX010000066.1 <> na Primary Assembly 131037 na HAP1_SCAFFOLD_91 unplaced-scaffold na na CGBKWX010000067.1 <> na Primary Assembly 129382 na HAP1_SCAFFOLD_92 unplaced-scaffold na na CGBKWX010000068.1 <> na Primary Assembly 128998 na HAP1_SCAFFOLD_93 unplaced-scaffold na na CGBKWX010000069.1 <> na Primary Assembly 128013 na HAP1_SCAFFOLD_94 unplaced-scaffold na na CGBKWX010000070.1 <> na Primary Assembly 122918 na HAP1_SCAFFOLD_95 unplaced-scaffold na na CGBKWX010000071.1 <> na Primary Assembly 120190 na HAP1_SCAFFOLD_96 unplaced-scaffold na na CGBKWX010000072.1 <> na Primary Assembly 119342 na HAP1_SCAFFOLD_97 unplaced-scaffold na na CGBKWX010000073.1 <> na Primary Assembly 117533 na HAP1_SCAFFOLD_98 unplaced-scaffold na na CGBKWX010000074.1 <> na Primary Assembly 117099 na HAP1_SCAFFOLD_99 unplaced-scaffold na na CGBKWX010000075.1 <> na Primary Assembly 114911 na HAP1_SCAFFOLD_100 unplaced-scaffold na na CGBKWX010000076.1 <> na Primary Assembly 114663 na HAP1_SCAFFOLD_101 unplaced-scaffold na na CGBKWX010000077.1 <> na Primary Assembly 109993 na HAP1_SCAFFOLD_102 unplaced-scaffold na na CGBKWX010000078.1 <> na Primary Assembly 108940 na HAP1_SCAFFOLD_103 unplaced-scaffold na na CGBKWX010000079.1 <> na Primary Assembly 107749 na HAP1_SCAFFOLD_104 unplaced-scaffold na na CGBKWX010000080.1 <> na Primary Assembly 107539 na HAP1_SCAFFOLD_105 unplaced-scaffold na na CGBKWX010000081.1 <> na Primary Assembly 107111 na HAP1_SCAFFOLD_106 unplaced-scaffold na na CGBKWX010000082.1 <> na Primary Assembly 106885 na HAP1_SCAFFOLD_107 unplaced-scaffold na na CGBKWX010000083.1 <> na Primary Assembly 105127 na HAP1_SCAFFOLD_108 unplaced-scaffold na na CGBKWX010000084.1 <> na Primary Assembly 102161 na HAP1_SCAFFOLD_109 unplaced-scaffold na na CGBKWX010000085.1 <> na Primary Assembly 102140 na HAP1_SCAFFOLD_110 unplaced-scaffold na na CGBKWX010000086.1 <> na Primary Assembly 100463 na HAP1_SCAFFOLD_111 unplaced-scaffold na na CGBKWX010000087.1 <> na Primary Assembly 100138 na HAP1_SCAFFOLD_112 unplaced-scaffold na na CGBKWX010000088.1 <> na Primary Assembly 97092 na HAP1_SCAFFOLD_113 unplaced-scaffold na na CGBKWX010000089.1 <> na Primary Assembly 96484 na HAP1_SCAFFOLD_114 unplaced-scaffold na na CGBKWX010000090.1 <> na Primary Assembly 96406 na HAP1_SCAFFOLD_115 unplaced-scaffold na na CGBKWX010000091.1 <> na Primary Assembly 93451 na HAP1_SCAFFOLD_116 unplaced-scaffold na na CGBKWX010000092.1 <> na Primary Assembly 92836 na HAP1_SCAFFOLD_117 unplaced-scaffold na na CGBKWX010000093.1 <> na Primary Assembly 92738 na HAP1_SCAFFOLD_118 unplaced-scaffold na na CGBKWX010000094.1 <> na Primary Assembly 88240 na HAP1_SCAFFOLD_119 unplaced-scaffold na na CGBKWX010000095.1 <> na Primary Assembly 87512 na HAP1_SCAFFOLD_120 unplaced-scaffold na na CGBKWX010000096.1 <> na Primary Assembly 85645 na HAP1_SCAFFOLD_121 unplaced-scaffold na na CGBKWX010000097.1 <> na Primary Assembly 83966 na HAP1_SCAFFOLD_122 unplaced-scaffold na na CGBKWX010000098.1 <> na Primary Assembly 83298 na HAP1_SCAFFOLD_123 unplaced-scaffold na na CGBKWX010000099.1 <> na Primary Assembly 82563 na HAP1_SCAFFOLD_124 unplaced-scaffold na na CGBKWX010000100.1 <> na Primary Assembly 81774 na HAP1_SCAFFOLD_125 unplaced-scaffold na na CGBKWX010000101.1 <> na Primary Assembly 80897 na HAP1_SCAFFOLD_126 unplaced-scaffold na na CGBKWX010000102.1 <> na Primary Assembly 80063 na HAP1_SCAFFOLD_127 unplaced-scaffold na na CGBKWX010000103.1 <> na Primary Assembly 76132 na HAP1_SCAFFOLD_128 unplaced-scaffold na na CGBKWX010000104.1 <> na Primary Assembly 71552 na HAP1_SCAFFOLD_129 unplaced-scaffold na na CGBKWX010000105.1 <> na Primary Assembly 70651 na HAP1_SCAFFOLD_130 unplaced-scaffold na na CGBKWX010000106.1 <> na Primary Assembly 69836 na HAP1_SCAFFOLD_131 unplaced-scaffold na na CGBKWX010000107.1 <> na Primary Assembly 69237 na HAP1_SCAFFOLD_132 unplaced-scaffold na na CGBKWX010000108.1 <> na Primary Assembly 67581 na HAP1_SCAFFOLD_133 unplaced-scaffold na na CGBKWX010000109.1 <> na Primary Assembly 66392 na HAP1_SCAFFOLD_134 unplaced-scaffold na na CGBKWX010000110.1 <> na Primary Assembly 66286 na HAP1_SCAFFOLD_135 unplaced-scaffold na na CGBKWX010000111.1 <> na Primary Assembly 61882 na HAP1_SCAFFOLD_136 unplaced-scaffold na na CGBKWX010000112.1 <> na Primary Assembly 60888 na HAP1_SCAFFOLD_137 unplaced-scaffold na na CGBKWX010000113.1 <> na Primary Assembly 60765 na HAP1_SCAFFOLD_138 unplaced-scaffold na na CGBKWX010000114.1 <> na Primary Assembly 58980 na HAP1_SCAFFOLD_139 unplaced-scaffold na na CGBKWX010000115.1 <> na Primary Assembly 54952 na HAP1_SCAFFOLD_140 unplaced-scaffold na na CGBKWX010000116.1 <> na Primary Assembly 54704 na HAP1_SCAFFOLD_141 unplaced-scaffold na na CGBKWX010000117.1 <> na Primary Assembly 53889 na HAP1_SCAFFOLD_142 unplaced-scaffold na na CGBKWX010000118.1 <> na Primary Assembly 53235 na HAP1_SCAFFOLD_143 unplaced-scaffold na na CGBKWX010000119.1 <> na Primary Assembly 53219 na HAP1_SCAFFOLD_144 unplaced-scaffold na na CGBKWX010000120.1 <> na Primary Assembly 52885 na HAP1_SCAFFOLD_145 unplaced-scaffold na na CGBKWX010000121.1 <> na Primary Assembly 51988 na HAP1_SCAFFOLD_146 unplaced-scaffold na na CGBKWX010000122.1 <> na Primary Assembly 51608 na HAP1_SCAFFOLD_147 unplaced-scaffold na na CGBKWX010000123.1 <> na Primary Assembly 50745 na HAP1_SCAFFOLD_148 unplaced-scaffold na na CGBKWX010000124.1 <> na Primary Assembly 50337 na HAP1_SCAFFOLD_149 unplaced-scaffold na na CGBKWX010000125.1 <> na Primary Assembly 49500 na HAP1_SCAFFOLD_150 unplaced-scaffold na na CGBKWX010000126.1 <> na Primary Assembly 48744 na HAP1_SCAFFOLD_151 unplaced-scaffold na na CGBKWX010000127.1 <> na Primary Assembly 48093 na HAP1_SCAFFOLD_152 unplaced-scaffold na na CGBKWX010000128.1 <> na Primary Assembly 44892 na HAP1_SCAFFOLD_153 unplaced-scaffold na na CGBKWX010000129.1 <> na Primary Assembly 44851 na HAP1_SCAFFOLD_154 unplaced-scaffold na na CGBKWX010000130.1 <> na Primary Assembly 43847 na HAP1_SCAFFOLD_155 unplaced-scaffold na na CGBKWX010000131.1 <> na Primary Assembly 42878 na HAP1_SCAFFOLD_156 unplaced-scaffold na na CGBKWX010000132.1 <> na Primary Assembly 42685 na HAP1_SCAFFOLD_157 unplaced-scaffold na na CGBKWX010000133.1 <> na Primary Assembly 42435 na HAP1_SCAFFOLD_158 unplaced-scaffold na na CGBKWX010000134.1 <> na Primary Assembly 42339 na HAP1_SCAFFOLD_159 unplaced-scaffold na na CGBKWX010000135.1 <> na Primary Assembly 41702 na HAP1_SCAFFOLD_160 unplaced-scaffold na na CGBKWX010000136.1 <> na Primary Assembly 40205 na HAP1_SCAFFOLD_161 unplaced-scaffold na na CGBKWX010000137.1 <> na Primary Assembly 39219 na HAP1_SCAFFOLD_163 unplaced-scaffold na na CGBKWX010000138.1 <> na Primary Assembly 37066 na HAP1_SCAFFOLD_164 unplaced-scaffold na na CGBKWX010000139.1 <> na Primary Assembly 36650 na HAP1_SCAFFOLD_165 unplaced-scaffold na na CGBKWX010000140.1 <> na Primary Assembly 36379 na HAP1_SCAFFOLD_166 unplaced-scaffold na na CGBKWX010000141.1 <> na Primary Assembly 36337 na HAP1_SCAFFOLD_167 unplaced-scaffold na na CGBKWX010000142.1 <> na Primary Assembly 36077 na HAP1_SCAFFOLD_168 unplaced-scaffold na na CGBKWX010000143.1 <> na Primary Assembly 35728 na HAP1_SCAFFOLD_169 unplaced-scaffold na na CGBKWX010000144.1 <> na Primary Assembly 35577 na HAP1_SCAFFOLD_170 unplaced-scaffold na na CGBKWX010000145.1 <> na Primary Assembly 34546 na HAP1_SCAFFOLD_171 unplaced-scaffold na na CGBKWX010000146.1 <> na Primary Assembly 34084 na HAP1_SCAFFOLD_172 unplaced-scaffold na na CGBKWX010000147.1 <> na Primary Assembly 33819 na HAP1_SCAFFOLD_174 unplaced-scaffold na na CGBKWX010000148.1 <> na Primary Assembly 32423 na HAP1_SCAFFOLD_175 unplaced-scaffold na na CGBKWX010000149.1 <> na Primary Assembly 30082 na HAP1_SCAFFOLD_176 unplaced-scaffold na na CGBKWX010000150.1 <> na Primary Assembly 29941 na HAP1_SCAFFOLD_177 unplaced-scaffold na na CGBKWX010000151.1 <> na Primary Assembly 28167 na HAP1_SCAFFOLD_178 unplaced-scaffold na na CGBKWX010000152.1 <> na Primary Assembly 27674 na HAP1_SCAFFOLD_179 unplaced-scaffold na na CGBKWX010000153.1 <> na Primary Assembly 25968 na HAP1_SCAFFOLD_181 unplaced-scaffold na na CGBKWX010000154.1 <> na Primary Assembly 25448 na HAP1_SCAFFOLD_182 unplaced-scaffold na na CGBKWX010000155.1 <> na Primary Assembly 25281 na HAP1_SCAFFOLD_183 unplaced-scaffold na na CGBKWX010000156.1 <> na Primary Assembly 24356 na HAP1_SCAFFOLD_184 unplaced-scaffold na na CGBKWX010000157.1 <> na Primary Assembly 23843 na HAP1_SCAFFOLD_185 unplaced-scaffold na na CGBKWX010000158.1 <> na Primary Assembly 23561 na HAP1_SCAFFOLD_186 unplaced-scaffold na na CGBKWX010000159.1 <> na Primary Assembly 23269 na HAP1_SCAFFOLD_189 unplaced-scaffold na na CGBKWX010000160.1 <> na Primary Assembly 19969 na HAP1_SCAFFOLD_190 unplaced-scaffold na na CGBKWX010000161.1 <> na Primary Assembly 18404 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ555641.1 <> na non-nuclear 16793 na