# Assembly name: bChlChl3.hap1.1 # Organism name: Chloris chloris (European greenfinch) # Taxid: 37601 # BioSample: SAMEA118680302 # BioProject: PRJEB122703 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-09-03 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFWXTD01 # Assembly method: various # Genome coverage: 64x # Sequencing technology: Oxford Nanopore,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_987196555.1 # Linked assembly: GCA_987196755.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1_HAP1 assembled-molecule 1 Chromosome OZ499559.1 <> na Primary Assembly 164700231 na SUPER_2_HAP1 assembled-molecule 2 Chromosome OZ499560.1 <> na Primary Assembly 121402730 na SUPER_3_HAP1 assembled-molecule 3 Chromosome OZ499561.1 <> na Primary Assembly 121277727 na SUPER_4_HAP1 assembled-molecule 4 Chromosome OZ499562.1 <> na Primary Assembly 79069941 na SUPER_5_HAP1 assembled-molecule 5 Chromosome OZ499563.1 <> na Primary Assembly 78381852 na SUPER_6_HAP1 assembled-molecule 6 Chromosome OZ499564.1 <> na Primary Assembly 70377577 na SUPER_7_HAP1 assembled-molecule 7 Chromosome OZ499565.1 <> na Primary Assembly 39865370 na SUPER_8_HAP1 assembled-molecule 8 Chromosome OZ499566.1 <> na Primary Assembly 37391351 na SUPER_9_HAP1 assembled-molecule 9 Chromosome OZ499567.1 <> na Primary Assembly 38229267 na SUPER_10_HAP1 assembled-molecule 10 Chromosome OZ499568.1 <> na Primary Assembly 32487740 na SUPER_11_HAP1 assembled-molecule 11 Chromosome OZ499569.1 <> na Primary Assembly 27670041 na SUPER_12_HAP1 assembled-molecule 12 Chromosome OZ499570.1 <> na Primary Assembly 25819520 na SUPER_13_HAP1 assembled-molecule 13 Chromosome OZ499571.1 <> na Primary Assembly 23494513 na SUPER_14_HAP1 assembled-molecule 14 Chromosome OZ499572.1 <> na Primary Assembly 22862377 na SUPER_15_HAP1 assembled-molecule 15 Chromosome OZ499573.1 <> na Primary Assembly 22448168 na SUPER_16_HAP1 assembled-molecule 16 Chromosome OZ499574.1 <> na Primary Assembly 18223948 na SUPER_17_HAP1 assembled-molecule 17 Chromosome OZ499575.1 <> na Primary Assembly 16189519 na SUPER_18_HAP1 assembled-molecule 18 Chromosome OZ499576.1 <> na Primary Assembly 15741511 na SUPER_19_HAP1 assembled-molecule 19 Chromosome OZ499577.1 <> na Primary Assembly 13015565 na SUPER_20_HAP1 assembled-molecule 20 Chromosome OZ499578.1 <> na Primary Assembly 12896355 na SUPER_21_HAP1 assembled-molecule 21 Chromosome OZ499579.1 <> na Primary Assembly 11915562 na SUPER_22_HAP1 assembled-molecule 22 Chromosome OZ499580.1 <> na Primary Assembly 9481965 na SUPER_23_HAP1 assembled-molecule 23 Chromosome OZ499581.1 <> na Primary Assembly 9219342 na SUPER_24_HAP1 assembled-molecule 24 Chromosome OZ499582.1 <> na Primary Assembly 9158802 na SUPER_25_HAP1 assembled-molecule 25 Chromosome OZ499583.1 <> na Primary Assembly 7889724 na SUPER_26_HAP1 assembled-molecule 26 Chromosome OZ499584.1 <> na Primary Assembly 7795655 na SUPER_27_HAP1 assembled-molecule 27 Chromosome OZ499585.1 <> na Primary Assembly 7730656 na SUPER_28_HAP1 assembled-molecule 28 Chromosome OZ499586.1 <> na Primary Assembly 6871481 na SUPER_29_HAP1 assembled-molecule 29 Chromosome OZ499587.1 <> na Primary Assembly 6490818 na SUPER_30_HAP1 assembled-molecule 30 Chromosome OZ499588.1 <> na Primary Assembly 5920997 na SUPER_31_HAP1 assembled-molecule 31 Chromosome OZ499589.1 <> na Primary Assembly 5726119 na SUPER_32_HAP1 assembled-molecule 32 Chromosome OZ499590.1 <> na Primary Assembly 5578216 na SUPER_33_HAP1 assembled-molecule 33 Chromosome OZ499591.1 <> na Primary Assembly 5528868 na SUPER_34_HAP1 assembled-molecule 34 Chromosome OZ499592.1 <> na Primary Assembly 5181296 na SUPER_35_HAP1 assembled-molecule 35 Chromosome OZ499593.1 <> na Primary Assembly 5071036 na SUPER_36_HAP1 assembled-molecule 36 Chromosome OZ499594.1 <> na Primary Assembly 4782920 na SUPER_37_HAP1 assembled-molecule 37 Chromosome OZ499595.1 <> na Primary Assembly 4766961 na SUPER_38_HAP1 assembled-molecule 38 Chromosome OZ499596.1 <> na Primary Assembly 4147592 na SUPER_39_HAP1 assembled-molecule 39 Chromosome OZ499597.1 <> na Primary Assembly 4109438 na SUPER_40_HAP1 assembled-molecule 40 Chromosome OZ499598.1 <> na Primary Assembly 3954669 na SUPER_Z_HAP1 assembled-molecule Z Chromosome OZ499599.1 <> na Primary Assembly 95390655 na SUPER_8_HAP1_unloc_1 unlocalized-scaffold 8 Chromosome CFWXTD010000001.1 <> na Primary Assembly 899266 na SUPER_8_HAP1_unloc_2 unlocalized-scaffold 8 Chromosome CFWXTD010000002.1 <> na Primary Assembly 582055 na SUPER_8_HAP1_unloc_3 unlocalized-scaffold 8 Chromosome CFWXTD010000003.1 <> na Primary Assembly 522985 na SUPER_8_HAP1_unloc_4 unlocalized-scaffold 8 Chromosome CFWXTD010000004.1 <> na Primary Assembly 195596 na HAP1_SCAFFOLD_49 unplaced-scaffold na na CFWXTD010000005.1 <> na Primary Assembly 466321 na HAP1_SCAFFOLD_50 unplaced-scaffold na na CFWXTD010000006.1 <> na Primary Assembly 278472 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CFWXTD010000007.1 <> na Primary Assembly 206669 na HAP1_SCAFFOLD_53 unplaced-scaffold na na CFWXTD010000008.1 <> na Primary Assembly 190426 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CFWXTD010000009.1 <> na Primary Assembly 26733 na HAP1_SCAFFOLD_56 unplaced-scaffold na na CFWXTD010000010.1 <> na Primary Assembly 7724 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CFWXTD010000011.1 <> na Primary Assembly 5759 na HAP1_SCAFFOLD_58 unplaced-scaffold na na CFWXTD010000012.1 <> na Primary Assembly 4557 na HAP1_SCAFFOLD_59 unplaced-scaffold na na CFWXTD010000013.1 <> na Primary Assembly 3741 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CFWXTD010000014.1 <> na Primary Assembly 3136 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CFWXTD010000015.1 <> na Primary Assembly 2176 na HAP1_SCAFFOLD_62 unplaced-scaffold na na CFWXTD010000016.1 <> na Primary Assembly 1962 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ499600.1 <> na non-nuclear 16813 na