# Assembly name: bMotCin1.hap1.1 # Organism name: Motacilla cinerea (birds) # Taxid: 56325 # BioSample: SAMEA120960991 # BioProject: PRJEB122728 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-09-03 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFWXTC01 # Assembly method: various # Genome coverage: 58x # Sequencing technology: Oxford Nanopore,Arima2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_987196015.1 # Linked assembly: GCA_987197015.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1_HAP1 assembled-molecule 1 Chromosome OZ499516.1 <> na Primary Assembly 157552143 na SUPER_2_HAP1 assembled-molecule 2 Chromosome OZ499517.1 <> na Primary Assembly 117696960 na SUPER_3_HAP1 assembled-molecule 3 Chromosome OZ499518.1 <> na Primary Assembly 116004419 na SUPER_4_HAP1 assembled-molecule 4 Chromosome OZ499519.1 <> na Primary Assembly 74785651 na SUPER_5_HAP1 assembled-molecule 5 Chromosome OZ499520.1 <> na Primary Assembly 74311177 na SUPER_6_HAP1 assembled-molecule 6 Chromosome OZ499521.1 <> na Primary Assembly 64732832 na SUPER_7_HAP1 assembled-molecule 7 Chromosome OZ499522.1 <> na Primary Assembly 50477953 na SUPER_8_HAP1 assembled-molecule 8 Chromosome OZ499523.1 <> na Primary Assembly 38625624 na SUPER_9_HAP1 assembled-molecule 9 Chromosome OZ499524.1 <> na Primary Assembly 33818991 na SUPER_10_HAP1 assembled-molecule 10 Chromosome OZ499525.1 <> na Primary Assembly 28589740 na SUPER_11_HAP1 assembled-molecule 11 Chromosome OZ499526.1 <> na Primary Assembly 24320643 na SUPER_12_HAP1 assembled-molecule 12 Chromosome OZ499527.1 <> na Primary Assembly 23915445 na SUPER_13_HAP1 assembled-molecule 13 Chromosome OZ499528.1 <> na Primary Assembly 23149840 na SUPER_14_HAP1 assembled-molecule 14 Chromosome OZ499529.1 <> na Primary Assembly 22612160 na SUPER_15_HAP1 assembled-molecule 15 Chromosome OZ499530.1 <> na Primary Assembly 21428054 na SUPER_16_HAP1 assembled-molecule 16 Chromosome OZ499531.1 <> na Primary Assembly 19756279 na SUPER_17_HAP1 assembled-molecule 17 Chromosome OZ499532.1 <> na Primary Assembly 18628201 na SUPER_18_HAP1 assembled-molecule 18 Chromosome OZ499533.1 <> na Primary Assembly 16556632 na SUPER_19_HAP1 assembled-molecule 19 Chromosome OZ499534.1 <> na Primary Assembly 13923048 na SUPER_20_HAP1 assembled-molecule 20 Chromosome OZ499535.1 <> na Primary Assembly 13896357 na SUPER_21_HAP1 assembled-molecule 21 Chromosome OZ499536.1 <> na Primary Assembly 13882163 na SUPER_22_HAP1 assembled-molecule 22 Chromosome OZ499537.1 <> na Primary Assembly 13584566 na SUPER_23_HAP1 assembled-molecule 23 Chromosome OZ499538.1 <> na Primary Assembly 12744882 na SUPER_24_HAP1 assembled-molecule 24 Chromosome OZ499539.1 <> na Primary Assembly 11051232 na SUPER_25_HAP1 assembled-molecule 25 Chromosome OZ499540.1 <> na Primary Assembly 10679919 na SUPER_26_HAP1 assembled-molecule 26 Chromosome OZ499541.1 <> na Primary Assembly 10438851 na SUPER_27_HAP1 assembled-molecule 27 Chromosome OZ499542.1 <> na Primary Assembly 10057939 na SUPER_28_HAP1 assembled-molecule 28 Chromosome OZ499543.1 <> na Primary Assembly 9831333 na SUPER_29_HAP1 assembled-molecule 29 Chromosome OZ499544.1 <> na Primary Assembly 9152373 na SUPER_30_HAP1 assembled-molecule 30 Chromosome OZ499545.1 <> na Primary Assembly 9081941 na SUPER_31_HAP1 assembled-molecule 31 Chromosome OZ499546.1 <> na Primary Assembly 8444045 na SUPER_32_HAP1 assembled-molecule 32 Chromosome OZ499547.1 <> na Primary Assembly 7832821 na SUPER_33_HAP1 assembled-molecule 33 Chromosome OZ499548.1 <> na Primary Assembly 7794679 na SUPER_34_HAP1 assembled-molecule 34 Chromosome OZ499549.1 <> na Primary Assembly 7629473 na SUPER_35_HAP1 assembled-molecule 35 Chromosome OZ499550.1 <> na Primary Assembly 7452271 na SUPER_36_HAP1 assembled-molecule 36 Chromosome OZ499551.1 <> na Primary Assembly 7418639 na SUPER_37_HAP1 assembled-molecule 37 Chromosome OZ499552.1 <> na Primary Assembly 7183539 na SUPER_38_HAP1 assembled-molecule 38 Chromosome OZ499553.1 <> na Primary Assembly 6929671 na SUPER_39_HAP1 assembled-molecule 39 Chromosome OZ499554.1 <> na Primary Assembly 6867764 na SUPER_W_HAP1 assembled-molecule W Chromosome OZ499555.1 <> na Primary Assembly 20187283 na SUPER_Z_HAP1 assembled-molecule Z Chromosome OZ499556.1 <> na Primary Assembly 82015324 na HAP1_SCAFFOLD_50 unplaced-scaffold na na CFWXTC010000001.1 <> na Primary Assembly 856827 na HAP1_SCAFFOLD_56 unplaced-scaffold na na CFWXTC010000002.1 <> na Primary Assembly 264118 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CFWXTC010000003.1 <> na Primary Assembly 257464 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CFWXTC010000004.1 <> na Primary Assembly 221478 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CFWXTC010000005.1 <> na Primary Assembly 201515 na HAP1_SCAFFOLD_62 unplaced-scaffold na na CFWXTC010000006.1 <> na Primary Assembly 195794 na HAP1_SCAFFOLD_63 unplaced-scaffold na na CFWXTC010000007.1 <> na Primary Assembly 193234 na HAP1_SCAFFOLD_64 unplaced-scaffold na na CFWXTC010000008.1 <> na Primary Assembly 186673 na HAP1_SCAFFOLD_65 unplaced-scaffold na na CFWXTC010000009.1 <> na Primary Assembly 183722 na HAP1_SCAFFOLD_66 unplaced-scaffold na na CFWXTC010000010.1 <> na Primary Assembly 144535 na HAP1_SCAFFOLD_68 unplaced-scaffold na na CFWXTC010000011.1 <> na Primary Assembly 141678 na HAP1_SCAFFOLD_69 unplaced-scaffold na na CFWXTC010000012.1 <> na Primary Assembly 138060 na HAP1_SCAFFOLD_70 unplaced-scaffold na na CFWXTC010000013.1 <> na Primary Assembly 123955 na HAP1_SCAFFOLD_71 unplaced-scaffold na na CFWXTC010000014.1 <> na Primary Assembly 114436 na HAP1_SCAFFOLD_72 unplaced-scaffold na na CFWXTC010000015.1 <> na Primary Assembly 113472 na HAP1_SCAFFOLD_73 unplaced-scaffold na na CFWXTC010000016.1 <> na Primary Assembly 109349 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CFWXTC010000017.1 <> na Primary Assembly 98149 na HAP1_SCAFFOLD_75 unplaced-scaffold na na CFWXTC010000018.1 <> na Primary Assembly 87959 na HAP1_SCAFFOLD_76 unplaced-scaffold na na CFWXTC010000019.1 <> na Primary Assembly 85939 na HAP1_SCAFFOLD_77 unplaced-scaffold na na CFWXTC010000020.1 <> na Primary Assembly 67327 na HAP1_SCAFFOLD_78 unplaced-scaffold na na CFWXTC010000021.1 <> na Primary Assembly 44451 na HAP1_SCAFFOLD_79 unplaced-scaffold na na CFWXTC010000022.1 <> na Primary Assembly 40423 na HAP1_SCAFFOLD_80 unplaced-scaffold na na CFWXTC010000023.1 <> na Primary Assembly 39399 na HAP1_SCAFFOLD_81 unplaced-scaffold na na CFWXTC010000024.1 <> na Primary Assembly 33256 na HAP1_SCAFFOLD_82 unplaced-scaffold na na CFWXTC010000025.1 <> na Primary Assembly 31875 na HAP1_SCAFFOLD_84 unplaced-scaffold na na CFWXTC010000026.1 <> na Primary Assembly 29721 na HAP1_SCAFFOLD_85 unplaced-scaffold na na CFWXTC010000027.1 <> na Primary Assembly 24487 na HAP1_SCAFFOLD_86 unplaced-scaffold na na CFWXTC010000028.1 <> na Primary Assembly 22857 na HAP1_SCAFFOLD_87 unplaced-scaffold na na CFWXTC010000029.1 <> na Primary Assembly 22552 na HAP1_SCAFFOLD_88 unplaced-scaffold na na CFWXTC010000030.1 <> na Primary Assembly 15933 na HAP1_SCAFFOLD_89 unplaced-scaffold na na CFWXTC010000031.1 <> na Primary Assembly 15071 na HAP1_SCAFFOLD_90 unplaced-scaffold na na CFWXTC010000032.1 <> na Primary Assembly 11401 na HAP1_SCAFFOLD_91 unplaced-scaffold na na CFWXTC010000033.1 <> na Primary Assembly 9071 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ499557.1 <> na non-nuclear 16836 na