# Assembly name: bPhaCol1.hap1.1 # Organism name: Phasianus colchicus (ring-necked pheasant) # Taxid: 9054 # BioSample: SAMEA118680281 # BioProject: PRJEB122832 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2026-09-01 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CFWXIS01 # Assembly method: various # Genome coverage: 58x # Sequencing technology: Oxford Nanopore,Arima2 # GenBank assembly accession: GCA_987193195.1 # Linked assembly: GCA_987193205.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1_HAP1 assembled-molecule 1 Chromosome OZ497652.1 <> na Primary Assembly 197968580 na SUPER_2_HAP1 assembled-molecule 2 Chromosome OZ497653.1 <> na Primary Assembly 111046336 na SUPER_3_HAP1 assembled-molecule 3 Chromosome OZ497654.1 <> na Primary Assembly 96057262 na SUPER_4_HAP1 assembled-molecule 4 Chromosome OZ497655.1 <> na Primary Assembly 72731597 na SUPER_5_HAP1 assembled-molecule 5 Chromosome OZ497656.1 <> na Primary Assembly 61158977 na SUPER_6_HAP1 assembled-molecule 6 Chromosome OZ497657.1 <> na Primary Assembly 53701935 na SUPER_7_HAP1 assembled-molecule 7 Chromosome OZ497658.1 <> na Primary Assembly 37143640 na SUPER_8_HAP1 assembled-molecule 8 Chromosome OZ497659.1 <> na Primary Assembly 36016901 na SUPER_9_HAP1 assembled-molecule 9 Chromosome OZ497660.1 <> na Primary Assembly 32839736 na SUPER_10_HAP1 assembled-molecule 10 Chromosome OZ497661.1 <> na Primary Assembly 25069144 na SUPER_11_HAP1 assembled-molecule 11 Chromosome OZ497662.1 <> na Primary Assembly 20934947 na SUPER_12_HAP1 assembled-molecule 12 Chromosome OZ497663.1 <> na Primary Assembly 20934068 na SUPER_13_HAP1 assembled-molecule 13 Chromosome OZ497664.1 <> na Primary Assembly 20463581 na SUPER_14_HAP1 assembled-molecule 14 Chromosome OZ497665.1 <> na Primary Assembly 20282077 na SUPER_15_HAP1 assembled-molecule 15 Chromosome OZ497666.1 <> na Primary Assembly 19778853 na SUPER_16_HAP1 assembled-molecule 16 Chromosome OZ497667.1 <> na Primary Assembly 16587549 na SUPER_17_HAP1 assembled-molecule 17 Chromosome OZ497668.1 <> na Primary Assembly 14462036 na SUPER_18_HAP1 assembled-molecule 18 Chromosome OZ497669.1 <> na Primary Assembly 13663689 na SUPER_19_HAP1 assembled-molecule 19 Chromosome OZ497670.1 <> na Primary Assembly 12835949 na SUPER_20_HAP1 assembled-molecule 20 Chromosome OZ497671.1 <> na Primary Assembly 11355485 na SUPER_21_HAP1 assembled-molecule 21 Chromosome OZ497672.1 <> na Primary Assembly 11052929 na SUPER_22_HAP1 assembled-molecule 22 Chromosome OZ497673.1 <> na Primary Assembly 7583745 na SUPER_23_HAP1 assembled-molecule 23 Chromosome OZ497674.1 <> na Primary Assembly 7209568 na SUPER_24_HAP1 assembled-molecule 24 Chromosome OZ497675.1 <> na Primary Assembly 6757824 na SUPER_25_HAP1 assembled-molecule 25 Chromosome OZ497676.1 <> na Primary Assembly 6293290 na SUPER_26_HAP1 assembled-molecule 26 Chromosome OZ497677.1 <> na Primary Assembly 6205539 na SUPER_27_HAP1 assembled-molecule 27 Chromosome OZ497678.1 <> na Primary Assembly 5633150 na SUPER_28_HAP1 assembled-molecule 28 Chromosome OZ497679.1 <> na Primary Assembly 5556774 na SUPER_29_HAP1 assembled-molecule 29 Chromosome OZ497680.1 <> na Primary Assembly 5277988 na SUPER_30_HAP1 assembled-molecule 30 Chromosome OZ497681.1 <> na Primary Assembly 4073692 na SUPER_31_HAP1 assembled-molecule 31 Chromosome OZ497682.1 <> na Primary Assembly 3721097 na SUPER_32_HAP1 assembled-molecule 32 Chromosome OZ497683.1 <> na Primary Assembly 3529484 na SUPER_33_HAP1 assembled-molecule 33 Chromosome OZ497684.1 <> na Primary Assembly 3423524 na SUPER_34_HAP1 assembled-molecule 34 Chromosome OZ497685.1 <> na Primary Assembly 3343538 na SUPER_35_HAP1 assembled-molecule 35 Chromosome OZ497686.1 <> na Primary Assembly 3235460 na SUPER_36_HAP1 assembled-molecule 36 Chromosome OZ497687.1 <> na Primary Assembly 3187821 na SUPER_37_HAP1 assembled-molecule 37 Chromosome OZ497688.1 <> na Primary Assembly 2981343 na SUPER_38_HAP1 assembled-molecule 38 Chromosome OZ497689.1 <> na Primary Assembly 2660999 na SUPER_39_HAP1 assembled-molecule 39 Chromosome OZ497690.1 <> na Primary Assembly 2330030 na SUPER_40_HAP1 assembled-molecule 40 Chromosome OZ497691.1 <> na Primary Assembly 2307320 na SUPER_Z_HAP1 assembled-molecule Z Chromosome OZ497692.1 <> na Primary Assembly 92844689 na HAP1_SCAFFOLD_42 unplaced-scaffold na na CFWXIS010000001.1 <> na Primary Assembly 1833998 na HAP1_SCAFFOLD_43 unplaced-scaffold na na CFWXIS010000002.1 <> na Primary Assembly 1629233 na HAP1_SCAFFOLD_44 unplaced-scaffold na na CFWXIS010000003.1 <> na Primary Assembly 1327158 na HAP1_SCAFFOLD_45 unplaced-scaffold na na CFWXIS010000004.1 <> na Primary Assembly 1289500 na HAP1_SCAFFOLD_48 unplaced-scaffold na na CFWXIS010000005.1 <> na Primary Assembly 1153592 na HAP1_SCAFFOLD_49 unplaced-scaffold na na CFWXIS010000006.1 <> na Primary Assembly 1151448 na HAP1_SCAFFOLD_50 unplaced-scaffold na na CFWXIS010000007.1 <> na Primary Assembly 999320 na HAP1_SCAFFOLD_51 unplaced-scaffold na na CFWXIS010000008.1 <> na Primary Assembly 838812 na HAP1_SCAFFOLD_53 unplaced-scaffold na na CFWXIS010000009.1 <> na Primary Assembly 798548 na HAP1_SCAFFOLD_54 unplaced-scaffold na na CFWXIS010000010.1 <> na Primary Assembly 739340 na HAP1_SCAFFOLD_55 unplaced-scaffold na na CFWXIS010000011.1 <> na Primary Assembly 728270 na HAP1_SCAFFOLD_56 unplaced-scaffold na na CFWXIS010000012.1 <> na Primary Assembly 707917 na HAP1_SCAFFOLD_57 unplaced-scaffold na na CFWXIS010000013.1 <> na Primary Assembly 699891 na HAP1_SCAFFOLD_59 unplaced-scaffold na na CFWXIS010000014.1 <> na Primary Assembly 657438 na HAP1_SCAFFOLD_60 unplaced-scaffold na na CFWXIS010000015.1 <> na Primary Assembly 583228 na HAP1_SCAFFOLD_61 unplaced-scaffold na na CFWXIS010000016.1 <> na Primary Assembly 562253 na HAP1_SCAFFOLD_62 unplaced-scaffold na na CFWXIS010000017.1 <> na Primary Assembly 548587 na HAP1_SCAFFOLD_65 unplaced-scaffold na na CFWXIS010000018.1 <> na Primary Assembly 455498 na HAP1_SCAFFOLD_66 unplaced-scaffold na na CFWXIS010000019.1 <> na Primary Assembly 430245 na HAP1_SCAFFOLD_67 unplaced-scaffold na na CFWXIS010000020.1 <> na Primary Assembly 411815 na HAP1_SCAFFOLD_68 unplaced-scaffold na na CFWXIS010000021.1 <> na Primary Assembly 408002 na HAP1_SCAFFOLD_69 unplaced-scaffold na na CFWXIS010000022.1 <> na Primary Assembly 379654 na HAP1_SCAFFOLD_71 unplaced-scaffold na na CFWXIS010000023.1 <> na Primary Assembly 368589 na HAP1_SCAFFOLD_72 unplaced-scaffold na na CFWXIS010000024.1 <> na Primary Assembly 359003 na HAP1_SCAFFOLD_73 unplaced-scaffold na na CFWXIS010000025.1 <> na Primary Assembly 341725 na HAP1_SCAFFOLD_74 unplaced-scaffold na na CFWXIS010000026.1 <> na Primary Assembly 339733 na HAP1_SCAFFOLD_75 unplaced-scaffold na na CFWXIS010000027.1 <> na Primary Assembly 332584 na HAP1_SCAFFOLD_76 unplaced-scaffold na na CFWXIS010000028.1 <> na Primary Assembly 321802 na HAP1_SCAFFOLD_77 unplaced-scaffold na na CFWXIS010000029.1 <> na Primary Assembly 287412 na HAP1_SCAFFOLD_78 unplaced-scaffold na na CFWXIS010000030.1 <> na Primary Assembly 284004 na HAP1_SCAFFOLD_80 unplaced-scaffold na na CFWXIS010000031.1 <> na Primary Assembly 273096 na HAP1_SCAFFOLD_81 unplaced-scaffold na na CFWXIS010000032.1 <> na Primary Assembly 269257 na HAP1_SCAFFOLD_82 unplaced-scaffold na na CFWXIS010000033.1 <> na Primary Assembly 265007 na HAP1_SCAFFOLD_83 unplaced-scaffold na na CFWXIS010000034.1 <> na Primary Assembly 234245 na HAP1_SCAFFOLD_84 unplaced-scaffold na na CFWXIS010000035.1 <> na Primary Assembly 223474 na HAP1_SCAFFOLD_85 unplaced-scaffold na na CFWXIS010000036.1 <> na Primary Assembly 222006 na HAP1_SCAFFOLD_86 unplaced-scaffold na na CFWXIS010000037.1 <> na Primary Assembly 198678 na HAP1_SCAFFOLD_88 unplaced-scaffold na na CFWXIS010000038.1 <> na Primary Assembly 182761 na HAP1_SCAFFOLD_89 unplaced-scaffold na na CFWXIS010000039.1 <> na Primary Assembly 174298 na HAP1_SCAFFOLD_90 unplaced-scaffold na na CFWXIS010000040.1 <> na Primary Assembly 172188 na HAP1_SCAFFOLD_91 unplaced-scaffold na na CFWXIS010000041.1 <> na Primary Assembly 170014 na HAP1_SCAFFOLD_92 unplaced-scaffold na na CFWXIS010000042.1 <> na Primary Assembly 167453 na HAP1_SCAFFOLD_93 unplaced-scaffold na na CFWXIS010000043.1 <> na Primary Assembly 166459 na HAP1_SCAFFOLD_95 unplaced-scaffold na na CFWXIS010000044.1 <> na Primary Assembly 162364 na HAP1_SCAFFOLD_96 unplaced-scaffold na na CFWXIS010000045.1 <> na Primary Assembly 161890 na HAP1_SCAFFOLD_97 unplaced-scaffold na na CFWXIS010000046.1 <> na Primary Assembly 146614 na HAP1_SCAFFOLD_98 unplaced-scaffold na na CFWXIS010000047.1 <> na Primary Assembly 129432 na HAP1_SCAFFOLD_99 unplaced-scaffold na na CFWXIS010000048.1 <> na Primary Assembly 117476 na HAP1_SCAFFOLD_100 unplaced-scaffold na na CFWXIS010000049.1 <> na Primary Assembly 114030 na HAP1_SCAFFOLD_101 unplaced-scaffold na na CFWXIS010000050.1 <> na Primary Assembly 91253 na HAP1_SCAFFOLD_102 unplaced-scaffold na na CFWXIS010000051.1 <> na Primary Assembly 82264 na HAP1_SCAFFOLD_103 unplaced-scaffold na na CFWXIS010000052.1 <> na Primary Assembly 81311 na HAP1_SCAFFOLD_104 unplaced-scaffold na na CFWXIS010000053.1 <> na Primary Assembly 74877 na HAP1_SCAFFOLD_105 unplaced-scaffold na na CFWXIS010000054.1 <> na Primary Assembly 67107 na HAP1_SCAFFOLD_106 unplaced-scaffold na na CFWXIS010000055.1 <> na Primary Assembly 64647 na HAP1_SCAFFOLD_107 unplaced-scaffold na na CFWXIS010000056.1 <> na Primary Assembly 60492 na HAP1_SCAFFOLD_108 unplaced-scaffold na na CFWXIS010000057.1 <> na Primary Assembly 60202 na HAP1_SCAFFOLD_109 unplaced-scaffold na na CFWXIS010000058.1 <> na Primary Assembly 59200 na HAP1_SCAFFOLD_110 unplaced-scaffold na na CFWXIS010000059.1 <> na Primary Assembly 54057 na HAP1_SCAFFOLD_111 unplaced-scaffold na na CFWXIS010000060.1 <> na Primary Assembly 50982 na HAP1_SCAFFOLD_112 unplaced-scaffold na na CFWXIS010000061.1 <> na Primary Assembly 47003 na HAP1_SCAFFOLD_113 unplaced-scaffold na na CFWXIS010000062.1 <> na Primary Assembly 45026 na HAP1_SCAFFOLD_114 unplaced-scaffold na na CFWXIS010000063.1 <> na Primary Assembly 44139 na HAP1_SCAFFOLD_115 unplaced-scaffold na na CFWXIS010000064.1 <> na Primary Assembly 42797 na HAP1_SCAFFOLD_116 unplaced-scaffold na na CFWXIS010000065.1 <> na Primary Assembly 41548 na HAP1_SCAFFOLD_117 unplaced-scaffold na na CFWXIS010000066.1 <> na Primary Assembly 35221 na HAP1_SCAFFOLD_119 unplaced-scaffold na na CFWXIS010000067.1 <> na Primary Assembly 22507 na scaffold_MT_1 assembled-molecule MT Mitochondrion OZ497693.1 <> na non-nuclear 16689 na