# Assembly name: fAthBoy1.1 # Organism name: Atherina boyeri (big-scale sand smelt) # Taxid: 87785 # BioSample: SAMEA120297169 # BioProject: PRJEB105446 # Submitter: Genoscope # Date: 2026-01-20 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CDXDJI01 # Assembly method: Hifiasm,Purge_dups,Yahs # Genome coverage: 64x # Sequencing technology: PacBio,Arima # RefSeq category: Reference Genome # GenBank assembly accession: GCA_978019495.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_978019494.1 Primary Assembly ## GCA_978019496.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name fAthBoy1_1 assembled-molecule 1 Chromosome OZ389851.1 <> na Primary Assembly 52659140 na fAthBoy1_2 assembled-molecule 2 Chromosome OZ389852.1 <> na Primary Assembly 51720967 na fAthBoy1_3 assembled-molecule 3 Chromosome OZ389853.1 <> na Primary Assembly 51207687 na fAthBoy1_4 assembled-molecule 4 Chromosome OZ389854.1 <> na Primary Assembly 51158786 na fAthBoy1_5 assembled-molecule 5 Chromosome OZ389855.1 <> na Primary Assembly 46728115 na fAthBoy1_6 assembled-molecule 6 Chromosome OZ389856.1 <> na Primary Assembly 45811499 na fAthBoy1_7 assembled-molecule 7 Chromosome OZ389857.1 <> na Primary Assembly 45362064 na fAthBoy1_8 assembled-molecule 8 Chromosome OZ389858.1 <> na Primary Assembly 44167743 na fAthBoy1_9 assembled-molecule 9 Chromosome OZ389859.1 <> na Primary Assembly 43234950 na fAthBoy1_10 assembled-molecule 10 Chromosome OZ389860.1 <> na Primary Assembly 43196640 na fAthBoy1_11 assembled-molecule 11 Chromosome OZ389861.1 <> na Primary Assembly 41689329 na fAthBoy1_12 assembled-molecule 12 Chromosome OZ389862.1 <> na Primary Assembly 41658674 na fAthBoy1_13 assembled-molecule 13 Chromosome OZ389863.1 <> na Primary Assembly 41160934 na fAthBoy1_14 assembled-molecule 14 Chromosome OZ389864.1 <> na Primary Assembly 41051524 na fAthBoy1_15 assembled-molecule 15 Chromosome OZ389865.1 <> na Primary Assembly 39853637 na fAthBoy1_16 assembled-molecule 16 Chromosome OZ389866.1 <> na Primary Assembly 38229565 na fAthBoy1_17 assembled-molecule 17 Chromosome OZ389867.1 <> na Primary Assembly 37494163 na fAthBoy1_18 assembled-molecule 18 Chromosome OZ389868.1 <> na Primary Assembly 37072691 na fAthBoy1_19 assembled-molecule 19 Chromosome OZ389869.1 <> na Primary Assembly 35484803 na fAthBoy1_20 assembled-molecule 20 Chromosome OZ389870.1 <> na Primary Assembly 35108218 na fAthBoy1_21 assembled-molecule 21 Chromosome OZ389871.1 <> na Primary Assembly 35042103 na fAthBoy1_22 assembled-molecule 22 Chromosome OZ389872.1 <> na Primary Assembly 34698427 na fAthBoy1_23 assembled-molecule 23 Chromosome OZ389873.1 <> na Primary Assembly 31716880 na fAthBoy1_24 assembled-molecule 24 Chromosome OZ389874.1 <> na Primary Assembly 25678419 na fAthBoy1_24_unloc_1 unlocalized-scaffold 24 Chromosome CDXDJI010000001.1 <> na Primary Assembly 161901 na scaffold_31 unplaced-scaffold na na CDXDJI010000002.1 <> na Primary Assembly 152000 na scaffold_33 unplaced-scaffold na na CDXDJI010000003.1 <> na Primary Assembly 114711 na scaffold_34 unplaced-scaffold na na CDXDJI010000004.1 <> na Primary Assembly 113000 na scaffold_36 unplaced-scaffold na na CDXDJI010000005.1 <> na Primary Assembly 102000 na scaffold_37 unplaced-scaffold na na CDXDJI010000006.1 <> na Primary Assembly 98000 na scaffold_38 unplaced-scaffold na na CDXDJI010000007.1 <> na Primary Assembly 84000 na scaffold_40 unplaced-scaffold na na CDXDJI010000008.1 <> na Primary Assembly 77000 na scaffold_44 unplaced-scaffold na na CDXDJI010000009.1 <> na Primary Assembly 67057 na scaffold_46 unplaced-scaffold na na CDXDJI010000010.1 <> na Primary Assembly 64000 na scaffold_47 unplaced-scaffold na na CDXDJI010000011.1 <> na Primary Assembly 63000 na scaffold_48 unplaced-scaffold na na CDXDJI010000012.1 <> na Primary Assembly 62420 na scaffold_50 unplaced-scaffold na na CDXDJI010000013.1 <> na Primary Assembly 61000 na scaffold_51 unplaced-scaffold na na CDXDJI010000014.1 <> na Primary Assembly 61000 na scaffold_53 unplaced-scaffold na na CDXDJI010000015.1 <> na Primary Assembly 59158 na scaffold_55 unplaced-scaffold na na CDXDJI010000016.1 <> na Primary Assembly 53651 na scaffold_56 unplaced-scaffold na na CDXDJI010000017.1 <> na Primary Assembly 53000 na scaffold_58 unplaced-scaffold na na CDXDJI010000018.1 <> na Primary Assembly 51000 na scaffold_59 unplaced-scaffold na na CDXDJI010000019.1 <> na Primary Assembly 48388 na scaffold_60 unplaced-scaffold na na CDXDJI010000020.1 <> na Primary Assembly 40015 na scaffold_61 unplaced-scaffold na na CDXDJI010000021.1 <> na Primary Assembly 38711 na scaffold_80 unplaced-scaffold na na CDXDJI010000022.1 <> na Primary Assembly 21990 na scaffold_81 unplaced-scaffold na na CDXDJI010000023.1 <> na Primary Assembly 21665 na scaffold_83 unplaced-scaffold na na CDXDJI010000024.1 <> na Primary Assembly 20913 na scaffold_84 unplaced-scaffold na na CDXDJI010000025.1 <> na Primary Assembly 19720 na scaffold_85 unplaced-scaffold na na CDXDJI010000026.1 <> na Primary Assembly 19594 na scaffold_86 unplaced-scaffold na na CDXDJI010000027.1 <> na Primary Assembly 19467 na scaffold_87 unplaced-scaffold na na CDXDJI010000028.1 <> na Primary Assembly 19258 na scaffold_88 unplaced-scaffold na na CDXDJI010000029.1 <> na Primary Assembly 19180 na scaffold_89 unplaced-scaffold na na CDXDJI010000030.1 <> na Primary Assembly 19031 na scaffold_90 unplaced-scaffold na na CDXDJI010000031.1 <> na Primary Assembly 18456 na scaffold_91 unplaced-scaffold na na CDXDJI010000032.1 <> na Primary Assembly 18232 na scaffold_92 unplaced-scaffold na na CDXDJI010000033.1 <> na Primary Assembly 17684 na scaffold_93 unplaced-scaffold na na CDXDJI010000034.1 <> na Primary Assembly 17360 na scaffold_94 unplaced-scaffold na na CDXDJI010000035.1 <> na Primary Assembly 16902 na scaffold_95 unplaced-scaffold na na CDXDJI010000036.1 <> na Primary Assembly 16745 na scaffold_96 unplaced-scaffold na na CDXDJI010000037.1 <> na Primary Assembly 16520 na scaffold_97 unplaced-scaffold na na CDXDJI010000038.1 <> na Primary Assembly 16327 na scaffold_98 unplaced-scaffold na na CDXDJI010000039.1 <> na Primary Assembly 16233 na scaffold_99 unplaced-scaffold na na CDXDJI010000040.1 <> na Primary Assembly 15687 na scaffold_100 unplaced-scaffold na na CDXDJI010000041.1 <> na Primary Assembly 15671 na scaffold_101 unplaced-scaffold na na CDXDJI010000042.1 <> na Primary Assembly 14814 na scaffold_102 unplaced-scaffold na na CDXDJI010000043.1 <> na Primary Assembly 14369 na scaffold_103 unplaced-scaffold na na CDXDJI010000044.1 <> na Primary Assembly 14206 na scaffold_104 unplaced-scaffold na na CDXDJI010000045.1 <> na Primary Assembly 13866 na scaffold_105 unplaced-scaffold na na CDXDJI010000046.1 <> na Primary Assembly 13619 na scaffold_106 unplaced-scaffold na na CDXDJI010000047.1 <> na Primary Assembly 13513 na scaffold_107 unplaced-scaffold na na CDXDJI010000048.1 <> na Primary Assembly 13139 na scaffold_108 unplaced-scaffold na na CDXDJI010000049.1 <> na Primary Assembly 12755 na scaffold_109 unplaced-scaffold na na CDXDJI010000050.1 <> na Primary Assembly 12554 na scaffold_110 unplaced-scaffold na na CDXDJI010000051.1 <> na Primary Assembly 12347 na scaffold_111 unplaced-scaffold na na CDXDJI010000052.1 <> na Primary Assembly 12295 na scaffold_112 unplaced-scaffold na na CDXDJI010000053.1 <> na Primary Assembly 11849 na scaffold_113 unplaced-scaffold na na CDXDJI010000054.1 <> na Primary Assembly 11707 na scaffold_114 unplaced-scaffold na na CDXDJI010000055.1 <> na Primary Assembly 11042 na scaffold_115 unplaced-scaffold na na CDXDJI010000056.1 <> na Primary Assembly 10503 na scaffold_116 unplaced-scaffold na na CDXDJI010000057.1 <> na Primary Assembly 10316 na mitochondrion_1 assembled-molecule MIT Mitochondrion OZ389875.1 <> na non-nuclear 16517 na