# Assembly name: pHetGlaV3 # Organism name: Heterocephalus glaber (naked mole-rat) # Taxid: 10181 # BioSample: SAMEA14374022 # BioProject: PRJEB71899 # Submitter: The Hospital for Sick Children, Toronto # Date: 2024-09-07 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAXVPJ01 # Assembly method: TrioCanu, Flye, Scaff10x, Salsa2, 3dDNA, minimap, racon, medaka, freebayes, mitoVGP, Blast # Genome coverage: 35x # Sequencing technology: Oxford Nanopore long read WGS, Phased 10X-linked read WGS, Hi-C seq # GenBank assembly accession: GCA_964261355.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_964261354.1 Primary Assembly ## GCA_964261356.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome OZ179200.1 <> na Primary Assembly 134700551 na chr2 assembled-molecule 2 Chromosome OZ179201.1 <> na Primary Assembly 128823644 na chr3 assembled-molecule 3 Chromosome OZ179202.1 <> na Primary Assembly 124608096 na chr4 assembled-molecule 4 Chromosome OZ179203.1 <> na Primary Assembly 123259399 na chr5 assembled-molecule 5 Chromosome OZ179204.1 <> na Primary Assembly 120541536 na chr6 assembled-molecule 6 Chromosome OZ179205.1 <> na Primary Assembly 97773000 na chr7 assembled-molecule 7 Chromosome OZ179206.1 <> na Primary Assembly 104092861 na chr8 assembled-molecule 8 Chromosome OZ179207.1 <> na Primary Assembly 113475660 na chr9 assembled-molecule 9 Chromosome OZ179208.1 <> na Primary Assembly 96917872 na chr10 assembled-molecule 10 Chromosome OZ179209.1 <> na Primary Assembly 83465915 na chr11 assembled-molecule 11 Chromosome OZ179210.1 <> na Primary Assembly 100488869 na chr12 assembled-molecule 12 Chromosome OZ179211.1 <> na Primary Assembly 88951319 na chr13 assembled-molecule 13 Chromosome OZ179212.1 <> na Primary Assembly 88995041 na chr14 assembled-molecule 14 Chromosome OZ179213.1 <> na Primary Assembly 77990402 na chr15 assembled-molecule 15 Chromosome OZ179214.1 <> na Primary Assembly 76494523 na chr16 assembled-molecule 16 Chromosome OZ179215.1 <> na Primary Assembly 72868007 na chr17 assembled-molecule 17 Chromosome OZ179216.1 <> na Primary Assembly 76841000 na chr18 assembled-molecule 18 Chromosome OZ179217.1 <> na Primary Assembly 67447141 na chr19 assembled-molecule 19 Chromosome OZ179218.1 <> na Primary Assembly 61218692 na chr20 assembled-molecule 20 Chromosome OZ179219.1 <> na Primary Assembly 61268251 na chr21 assembled-molecule 21 Chromosome OZ179220.1 <> na Primary Assembly 63504172 na chr22 assembled-molecule 22 Chromosome OZ179221.1 <> na Primary Assembly 58116409 na chr23 assembled-molecule 23 Chromosome OZ179222.1 <> na Primary Assembly 55174953 na chr24 assembled-molecule 24 Chromosome OZ179223.1 <> na Primary Assembly 52711000 na chr25 assembled-molecule 25 Chromosome OZ179224.1 <> na Primary Assembly 46494108 na chr26 assembled-molecule 26 Chromosome OZ179225.1 <> na Primary Assembly 45364800 na chr27 assembled-molecule 27 Chromosome OZ179226.1 <> na Primary Assembly 38888248 na chr28 assembled-molecule 28 Chromosome OZ179227.1 <> na Primary Assembly 32551853 na chr29 assembled-molecule 29 Chromosome OZ179228.1 <> na Primary Assembly 23290160 na chrX assembled-molecule X Chromosome OZ179229.1 <> na Primary Assembly 145422200 na chrY_tig1 unplaced-scaffold na na CAXVPJ010000001.1 <> na Primary Assembly 1127890 na chrY_tig2 unplaced-scaffold na na CAXVPJ010000002.1 <> na Primary Assembly 50063 na chrY_tig3 unplaced-scaffold na na CAXVPJ010000003.1 <> na Primary Assembly 50013 na chrY_tig4 unplaced-scaffold na na CAXVPJ010000004.1 <> na Primary Assembly 32295 na chrY_tig5 unplaced-scaffold na na CAXVPJ010000005.1 <> na Primary Assembly 29017 na chrY_tig6 unplaced-scaffold na na CAXVPJ010000006.1 <> na Primary Assembly 25080 na chrY_tig7 unplaced-scaffold na na CAXVPJ010000007.1 <> na Primary Assembly 25067 na chrY_tig8 unplaced-scaffold na na CAXVPJ010000008.1 <> na Primary Assembly 25029 na chrY_tig9 unplaced-scaffold na na CAXVPJ010000009.1 <> na Primary Assembly 25015 na chrY_tig10 unplaced-scaffold na na CAXVPJ010000010.1 <> na Primary Assembly 25001 na chrY_tig11 unplaced-scaffold na na CAXVPJ010000011.1 <> na Primary Assembly 24991 na chrY_tig12 unplaced-scaffold na na CAXVPJ010000012.1 <> na Primary Assembly 24989 na chrY_tig13 unplaced-scaffold na na CAXVPJ010000013.1 <> na Primary Assembly 12903 na chrY_tig14 unplaced-scaffold na na CAXVPJ010000014.1 <> na Primary Assembly 11393 na pTig1 unplaced-scaffold na na CAXVPJ010000015.1 <> na Primary Assembly 588000 na pTig2 unplaced-scaffold na na CAXVPJ010000016.1 <> na Primary Assembly 91680 na pTig3 unplaced-scaffold na na CAXVPJ010000017.1 <> na Primary Assembly 93000 na pTig4 unplaced-scaffold na na CAXVPJ010000018.1 <> na Primary Assembly 118000 na pTig5 unplaced-scaffold na na CAXVPJ010000019.1 <> na Primary Assembly 10000 na pTig6 unplaced-scaffold na na CAXVPJ010000020.1 <> na Primary Assembly 115000 na pTig7 unplaced-scaffold na na CAXVPJ010000021.1 <> na Primary Assembly 101000 na pTig8 unplaced-scaffold na na CAXVPJ010000022.1 <> na Primary Assembly 99000 na pTig9 unplaced-scaffold na na CAXVPJ010000023.1 <> na Primary Assembly 952000 na pTig10 unplaced-scaffold na na CAXVPJ010000024.1 <> na Primary Assembly 4511000 na pTig11 unplaced-scaffold na na CAXVPJ010000025.1 <> na Primary Assembly 331000 na pTig12 unplaced-scaffold na na CAXVPJ010000026.1 <> na Primary Assembly 13867 na pTig13 unplaced-scaffold na na CAXVPJ010000027.1 <> na Primary Assembly 433133 na pTig14 unplaced-scaffold na na CAXVPJ010000028.1 <> na Primary Assembly 60000 na pTig15 unplaced-scaffold na na CAXVPJ010000029.1 <> na Primary Assembly 824000 na pTig16 unplaced-scaffold na na CAXVPJ010000030.1 <> na Primary Assembly 172000 na pTig17 unplaced-scaffold na na CAXVPJ010000031.1 <> na Primary Assembly 93557 na pTig18 unplaced-scaffold na na CAXVPJ010000032.1 <> na Primary Assembly 123000 na pTig19 unplaced-scaffold na na CAXVPJ010000033.1 <> na Primary Assembly 1002000 na pTig20 unplaced-scaffold na na CAXVPJ010000034.1 <> na Primary Assembly 51172 na pTig21 unplaced-scaffold na na CAXVPJ010000035.1 <> na Primary Assembly 135892 na pTig22 unplaced-scaffold na na CAXVPJ010000036.1 <> na Primary Assembly 75000 na pTig23 unplaced-scaffold na na CAXVPJ010000037.1 <> na Primary Assembly 334458 na pTig24 unplaced-scaffold na na CAXVPJ010000038.1 <> na Primary Assembly 93000 na pTig25 unplaced-scaffold na na CAXVPJ010000039.1 <> na Primary Assembly 62575 na pTig26 unplaced-scaffold na na CAXVPJ010000040.1 <> na Primary Assembly 21000 na pTig27 unplaced-scaffold na na CAXVPJ010000041.1 <> na Primary Assembly 33000 na pTig28 unplaced-scaffold na na CAXVPJ010000042.1 <> na Primary Assembly 461000 na pTig29 unplaced-scaffold na na CAXVPJ010000043.1 <> na Primary Assembly 11000 na pTig30 unplaced-scaffold na na CAXVPJ010000044.1 <> na Primary Assembly 182000 na pTig31 unplaced-scaffold na na CAXVPJ010000045.1 <> na Primary Assembly 34000 na pTig32 unplaced-scaffold na na CAXVPJ010000046.1 <> na Primary Assembly 50000 na pTig33 unplaced-scaffold na na CAXVPJ010000047.1 <> na Primary Assembly 16000 na pTig34 unplaced-scaffold na na CAXVPJ010000048.1 <> na Primary Assembly 12000 na MT assembled-molecule MT Mitochondrion OZ179230.1 <> na non-nuclear 16428 na